View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8987_low_11 (Length: 420)

Name: NF8987_low_11
Description: NF8987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8987_low_11
NF8987_low_11
[»] chr4 (31 HSPs)
chr4 (134-329)||(26239944-26240142)
chr4 (2-134)||(15988809-15988941)
chr4 (2-94)||(33184864-33184956)
chr4 (2-106)||(4829378-4829481)
chr4 (2-106)||(4832673-4832776)
chr4 (3-106)||(4835969-4836071)
chr4 (13-134)||(10358275-10358394)
chr4 (9-136)||(21060844-21060969)
chr4 (9-134)||(19926-20049)
chr4 (21-94)||(14184033-14184106)
chr4 (13-134)||(25089646-25089765)
chr4 (21-94)||(14187572-14187645)
chr4 (13-134)||(14547605-14547724)
chr4 (13-134)||(9872113-9872234)
chr4 (7-134)||(51992169-51992295)
chr4 (13-134)||(4859681-4859800)
chr4 (13-134)||(16996521-16996640)
chr4 (9-136)||(15607607-15607730)
chr4 (9-134)||(32467855-32467978)
chr4 (22-134)||(14628498-14628610)
chr4 (54-94)||(2754472-2754512)
chr4 (54-94)||(18210858-18210898)
chr4 (54-94)||(30145124-30145164)
chr4 (54-94)||(43258993-43259033)
chr4 (54-94)||(14046742-14046782)
chr4 (54-94)||(24049255-24049295)
chr4 (100-134)||(4890013-4890047)
chr4 (54-95)||(14971706-14971747)
chr4 (101-134)||(16027969-16028002)
chr4 (58-94)||(19619078-19619114)
chr4 (54-134)||(37017588-37017667)
[»] chr7 (43 HSPs)
chr7 (2-134)||(14190129-14190261)
chr7 (2-134)||(14192887-14193019)
chr7 (2-134)||(15212458-15212590)
chr7 (4-134)||(48742220-48742350)
chr7 (4-134)||(13254286-13254414)
chr7 (13-135)||(12370350-12370470)
chr7 (13-134)||(15121156-15121275)
chr7 (13-134)||(44372996-44373115)
chr7 (13-134)||(44381852-44381971)
chr7 (9-134)||(32996939-32997062)
chr7 (13-134)||(36706515-36706634)
chr7 (9-134)||(17131352-17131475)
chr7 (13-134)||(13151476-13151595)
chr7 (13-134)||(36687104-36687227)
chr7 (9-134)||(4070052-4070176)
chr7 (9-134)||(14552932-14553055)
chr7 (13-134)||(15718940-15719059)
chr7 (13-134)||(32435365-32435484)
chr7 (9-132)||(14220847-14220966)
chr7 (13-134)||(19280801-19280921)
chr7 (58-136)||(11084553-11084631)
chr7 (12-134)||(13700560-13700680)
chr7 (9-137)||(10660866-10660983)
chr7 (54-135)||(16004211-16004292)
chr7 (54-94)||(145787-145827)
chr7 (54-94)||(16110675-16110715)
chr7 (53-136)||(30822892-30822976)
chr7 (54-94)||(34956304-34956344)
chr7 (55-134)||(11092307-11092386)
chr7 (100-135)||(15578586-15578621)
chr7 (13-98)||(11065515-11065599)
chr7 (13-106)||(20584333-20584425)
chr7 (54-94)||(834744-834784)
chr7 (54-94)||(854785-854825)
chr7 (54-94)||(1199924-1199964)
chr7 (54-94)||(1212789-1212829)
chr7 (54-94)||(11659562-11659602)
chr7 (54-94)||(14419975-14420015)
chr7 (58-94)||(16252441-16252477)
chr7 (100-134)||(4692544-4692578)
chr7 (9-136)||(13134759-13134886)
chr7 (54-135)||(13890806-13890887)
chr7 (9-63)||(37786147-37786201)
[»] chr2 (39 HSPs)
chr2 (2-134)||(21244733-21244865)
chr2 (2-134)||(26895227-26895359)
chr2 (2-134)||(26900666-26900798)
chr2 (2-134)||(19803018-19803151)
chr2 (8-126)||(10898660-10898778)
chr2 (2-106)||(22702022-22702126)
chr2 (343-405)||(35338566-35338628)
chr2 (13-134)||(2524520-2524639)
chr2 (9-134)||(19357111-19357234)
chr2 (13-134)||(24782808-24782928)
chr2 (9-137)||(18390105-18390232)
chr2 (9-134)||(22670861-22670984)
chr2 (13-134)||(17305490-17305609)
chr2 (13-132)||(23759617-23759734)
chr2 (9-134)||(5984448-5984571)
chr2 (13-134)||(24514249-24514368)
chr2 (13-134)||(28654482-28654601)
chr2 (13-134)||(36838187-36838306)
chr2 (13-134)||(25084463-25084582)
chr2 (82-135)||(27058488-27058540)
chr2 (17-134)||(5033265-5033383)
chr2 (54-134)||(19665301-19665381)
chr2 (82-134)||(25044328-25044379)
chr2 (13-128)||(22253517-22253630)
chr2 (53-106)||(12629640-12629693)
chr2 (54-94)||(6262921-6262961)
chr2 (54-94)||(18872910-18872950)
chr2 (54-94)||(19664342-19664382)
chr2 (54-94)||(21078113-21078153)
chr2 (84-134)||(44070823-44070873)
chr2 (54-94)||(9239973-9240013)
chr2 (13-64)||(27039849-27039900)
chr2 (9-59)||(14692629-14692679)
chr2 (100-134)||(22258232-22258266)
chr2 (100-134)||(24740478-24740512)
chr2 (54-91)||(13102536-13102573)
chr2 (82-135)||(24669836-24669888)
chr2 (101-134)||(24783125-24783158)
chr2 (101-138)||(27850897-27850934)
[»] chr3 (49 HSPs)
chr3 (2-134)||(13027530-13027662)
chr3 (2-134)||(21081467-21081599)
chr3 (2-106)||(1990396-1990500)
chr3 (4-98)||(16326448-16326541)
chr3 (2-106)||(34853719-34853822)
chr3 (13-135)||(22308522-22308642)
chr3 (9-134)||(16727490-16727615)
chr3 (13-134)||(14440100-14440219)
chr3 (9-134)||(15025178-15025301)
chr3 (9-134)||(20416439-20416562)
chr3 (14-134)||(42328169-42328287)
chr3 (9-134)||(52312197-52312320)
chr3 (13-131)||(4874624-4874740)
chr3 (13-135)||(17325850-17325971)
chr3 (13-135)||(44268498-44268618)
chr3 (13-134)||(2843341-2843460)
chr3 (9-134)||(8493080-8493203)
chr3 (9-134)||(35066442-35066565)
chr3 (13-134)||(41174428-41174547)
chr3 (13-134)||(53647758-53647878)
chr3 (13-131)||(4852890-4853006)
chr3 (9-134)||(12507710-12507833)
chr3 (9-134)||(9643551-9643674)
chr3 (9-134)||(19574002-19574125)
chr3 (5-71)||(36526859-36526926)
chr3 (54-94)||(3801224-3801264)
chr3 (54-94)||(16840887-16840927)
chr3 (54-94)||(20250617-20250657)
chr3 (54-94)||(51609063-51609103)
chr3 (5-74)||(3265950-3266020)
chr3 (9-46)||(12513741-12513778)
chr3 (13-106)||(19885677-19885769)
chr3 (54-94)||(10556258-10556298)
chr3 (54-94)||(11911924-11911964)
chr3 (54-90)||(24341509-24341545)
chr3 (54-94)||(29546788-29546828)
chr3 (54-94)||(38313630-38313670)
chr3 (84-134)||(13178653-13178704)
chr3 (85-136)||(17259847-17259898)
chr3 (56-135)||(23273872-23273951)
chr3 (22-134)||(24554133-24554245)
chr3 (22-134)||(24557195-24557307)
chr3 (83-134)||(11561241-11561293)
chr3 (93-135)||(17206136-17206178)
chr3 (60-94)||(18898702-18898736)
chr3 (21-78)||(1209627-1209684)
chr3 (13-106)||(5213861-5213953)
chr3 (62-94)||(10952966-10952998)
chr3 (54-94)||(23172721-23172761)
[»] chr1 (27 HSPs)
chr1 (2-134)||(21652385-21652517)
chr1 (2-95)||(12359947-12360040)
chr1 (332-405)||(28131648-28131721)
chr1 (9-134)||(22348686-22348810)
chr1 (13-133)||(38888996-38889115)
chr1 (9-135)||(19674700-19674827)
chr1 (13-135)||(8277942-8278062)
chr1 (13-136)||(48299920-48300041)
chr1 (9-132)||(24725644-24725763)
chr1 (12-134)||(1641624-1641745)
chr1 (13-134)||(4597922-4598043)
chr1 (9-134)||(24724443-24724566)
chr1 (13-134)||(16060238-16060358)
chr1 (54-94)||(16370189-16370229)
chr1 (54-94)||(21341388-21341428)
chr1 (54-94)||(29533239-29533279)
chr1 (82-134)||(42910947-42910998)
chr1 (22-135)||(44890665-44890778)
chr1 (9-64)||(45753852-45753907)
chr1 (9-64)||(51475216-51475271)
chr1 (100-132)||(13301131-13301163)
chr1 (54-94)||(32648319-32648359)
chr1 (9-64)||(42696104-42696159)
chr1 (100-134)||(17904995-17905029)
chr1 (58-136)||(31611509-31611587)
chr1 (22-78)||(12711691-12711747)
chr1 (55-95)||(49999364-49999404)
[»] chr5 (27 HSPs)
chr5 (2-134)||(6554557-6554689)
chr5 (2-134)||(22468800-22468933)
chr5 (2-134)||(6555158-6555290)
chr5 (2-134)||(22359123-22359256)
chr5 (2-106)||(23540494-23540597)
chr5 (2-106)||(23537344-23537447)
chr5 (2-106)||(10815511-10815614)
chr5 (330-405)||(9309011-9309086)
chr5 (13-136)||(26760473-26760594)
chr5 (9-132)||(25251504-25251627)
chr5 (9-132)||(25315289-25315412)
chr5 (9-135)||(16226124-16226248)
chr5 (9-134)||(20564550-20564674)
chr5 (13-134)||(10952309-10952430)
chr5 (13-134)||(11898909-11899028)
chr5 (21-134)||(26748273-26748386)
chr5 (54-136)||(28372866-28372948)
chr5 (54-94)||(22338266-22338306)
chr5 (54-94)||(22748509-22748549)
chr5 (54-94)||(23114188-23114228)
chr5 (54-94)||(37806218-37806258)
chr5 (9-134)||(20470734-20470856)
chr5 (55-134)||(26833329-26833408)
chr5 (9-135)||(26645766-26645892)
chr5 (54-94)||(22334736-22334776)
chr5 (54-94)||(36448159-36448199)
chr5 (101-135)||(29913616-29913650)
[»] scaffold0335 (1 HSPs)
scaffold0335 (2-135)||(8512-8645)
[»] chr8 (32 HSPs)
chr8 (2-135)||(19878396-19878529)
chr8 (2-134)||(24977253-24977387)
chr8 (13-134)||(21398250-21398370)
chr8 (13-134)||(21792743-21792863)
chr8 (9-136)||(19664098-19664224)
chr8 (9-136)||(20453330-20453456)
chr8 (9-134)||(23946597-23946719)
chr8 (9-134)||(17216904-17217027)
chr8 (13-134)||(20180404-20180523)
chr8 (9-134)||(22333596-22333720)
chr8 (13-134)||(25850112-25850232)
chr8 (13-134)||(39937919-39938038)
chr8 (9-134)||(22242479-22242606)
chr8 (9-134)||(17908539-17908662)
chr8 (9-134)||(23417664-23417785)
chr8 (55-135)||(12576060-12576140)
chr8 (24-134)||(42267772-42267880)
chr8 (9-136)||(39696454-39696579)
chr8 (9-134)||(8463-8586)
chr8 (13-134)||(45118890-45119009)
chr8 (54-94)||(25066519-25066559)
chr8 (54-94)||(27943406-27943446)
chr8 (100-135)||(17980448-17980483)
chr8 (100-135)||(18821059-18821094)
chr8 (9-64)||(22585344-22585399)
chr8 (9-99)||(18759368-18759457)
chr8 (9-57)||(6103548-6103596)
chr8 (58-94)||(25648248-25648284)
chr8 (83-135)||(31724897-31724950)
chr8 (54-93)||(42561422-42561461)
chr8 (84-134)||(45472123-45472173)
chr8 (58-94)||(17622334-17622370)
[»] chr6 (34 HSPs)
chr6 (2-134)||(29849585-29849717)
chr6 (2-122)||(13762959-13763079)
chr6 (2-134)||(29417985-29418117)
chr6 (13-136)||(24551351-24551472)
chr6 (13-135)||(20412649-20412769)
chr6 (2-94)||(5112345-5112436)
chr6 (13-134)||(23017992-23018111)
chr6 (13-134)||(31732519-31732638)
chr6 (13-134)||(27127362-27127481)
chr6 (13-134)||(1641968-1642088)
chr6 (9-134)||(17757630-17757753)
chr6 (57-134)||(35137566-35137643)
chr6 (54-134)||(10989028-10989108)
chr6 (54-134)||(15815909-15815989)
chr6 (54-134)||(21321065-21321145)
chr6 (9-134)||(23498812-23498937)
chr6 (11-134)||(31736483-31736605)
chr6 (54-135)||(27222039-27222120)
chr6 (54-94)||(4475049-4475089)
chr6 (21-134)||(21681226-21681339)
chr6 (58-134)||(18857086-18857162)
chr6 (54-90)||(1253654-1253690)
chr6 (54-94)||(25737390-25737430)
chr6 (54-94)||(34298314-34298354)
chr6 (55-94)||(4644706-4644745)
chr6 (100-134)||(18325705-18325739)
chr6 (9-46)||(22213175-22213212)
chr6 (82-134)||(25607363-25607416)
chr6 (54-94)||(364-404)
chr6 (83-134)||(18692781-18692833)
chr6 (83-134)||(18906271-18906323)
chr6 (54-94)||(24644456-24644496)
chr6 (235-263)||(31236846-31236874)
chr6 (84-135)||(32261930-32261981)
[»] scaffold0577 (2 HSPs)
scaffold0577 (2-136)||(6671-6804)
scaffold0577 (53-134)||(9761-9842)
[»] scaffold0001 (4 HSPs)
scaffold0001 (2-92)||(391084-391174)
scaffold0001 (16-134)||(31051-31167)
scaffold0001 (16-134)||(36358-36474)
scaffold0001 (54-90)||(154368-154404)
[»] scaffold0328 (1 HSPs)
scaffold0328 (9-134)||(17333-17456)
[»] scaffold0026 (2 HSPs)
scaffold0026 (13-134)||(144869-144989)
scaffold0026 (54-94)||(108854-108894)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-134)||(94587-94710)
[»] scaffold0066 (1 HSPs)
scaffold0066 (2-106)||(47219-47322)
[»] scaffold0083 (1 HSPs)
scaffold0083 (8-134)||(7316-7440)
[»] scaffold0509 (1 HSPs)
scaffold0509 (13-134)||(10650-10769)
[»] scaffold0375 (1 HSPs)
scaffold0375 (13-134)||(10259-10379)
[»] scaffold0301 (1 HSPs)
scaffold0301 (13-135)||(9879-9999)
[»] scaffold0059 (1 HSPs)
scaffold0059 (53-135)||(57581-57662)
[»] scaffold0075 (2 HSPs)
scaffold0075 (9-134)||(59625-59748)
scaffold0075 (13-135)||(4179-4298)
[»] scaffold0004 (3 HSPs)
scaffold0004 (9-134)||(330386-330509)
scaffold0004 (22-136)||(108529-108642)
scaffold0004 (21-78)||(73813-73870)
[»] scaffold0117 (2 HSPs)
scaffold0117 (5-94)||(42139-42229)
scaffold0117 (54-135)||(19393-19474)
[»] scaffold1600 (1 HSPs)
scaffold1600 (13-134)||(1311-1430)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-134)||(79240-79355)
[»] scaffold0371 (2 HSPs)
scaffold0371 (13-135)||(12268-12388)
scaffold0371 (100-135)||(13883-13918)
[»] scaffold0241 (2 HSPs)
scaffold0241 (9-134)||(538-659)
scaffold0241 (54-134)||(18591-18672)
[»] scaffold0051 (1 HSPs)
scaffold0051 (13-115)||(69444-69545)
[»] scaffold0020 (1 HSPs)
scaffold0020 (13-135)||(141536-141657)
[»] scaffold0195 (2 HSPs)
scaffold0195 (13-134)||(8565-8684)
scaffold0195 (13-134)||(13954-14073)
[»] scaffold0134 (1 HSPs)
scaffold0134 (13-134)||(11245-11364)
[»] scaffold0107 (1 HSPs)
scaffold0107 (13-130)||(35765-35881)
[»] scaffold0042 (2 HSPs)
scaffold0042 (9-134)||(27596-27720)
scaffold0042 (9-64)||(48365-48420)
[»] scaffold0462 (1 HSPs)
scaffold0462 (10-134)||(4971-5093)
[»] scaffold0321 (1 HSPs)
scaffold0321 (28-134)||(1776-1880)
[»] scaffold0589 (1 HSPs)
scaffold0589 (9-134)||(2657-2780)
[»] scaffold1580 (1 HSPs)
scaffold1580 (55-134)||(191-270)
[»] scaffold0139 (1 HSPs)
scaffold0139 (55-134)||(22359-22438)
[»] scaffold0040 (1 HSPs)
scaffold0040 (13-134)||(105200-105320)
[»] scaffold0016 (1 HSPs)
scaffold0016 (9-134)||(171394-171517)
[»] scaffold1243 (1 HSPs)
scaffold1243 (13-117)||(1076-1178)
[»] scaffold0434 (1 HSPs)
scaffold0434 (82-134)||(8014-8065)
[»] scaffold0039 (1 HSPs)
scaffold0039 (82-134)||(21804-21855)
[»] scaffold0005 (1 HSPs)
scaffold0005 (22-134)||(188773-188885)
[»] scaffold0529 (1 HSPs)
scaffold0529 (9-134)||(6548-6669)
[»] scaffold0080 (2 HSPs)
scaffold0080 (54-136)||(27678-27760)
scaffold0080 (83-134)||(56286-56338)
[»] scaffold0019 (2 HSPs)
scaffold0019 (54-136)||(138667-138749)
scaffold0019 (54-94)||(24993-25033)
[»] scaffold0002 (2 HSPs)
scaffold0002 (9-106)||(396838-396932)
scaffold0002 (84-134)||(128284-128335)
[»] scaffold0337 (1 HSPs)
scaffold0337 (54-135)||(11611-11692)
[»] scaffold0220 (1 HSPs)
scaffold0220 (9-134)||(16753-16876)
[»] scaffold1223 (1 HSPs)
scaffold1223 (54-94)||(2175-2215)
[»] scaffold0037 (2 HSPs)
scaffold0037 (54-94)||(66180-66220)
scaffold0037 (84-134)||(114313-114363)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-105)||(128030-128125)
[»] scaffold1256 (1 HSPs)
scaffold1256 (22-134)||(1221-1333)
[»] scaffold0445 (1 HSPs)
scaffold0445 (9-134)||(3571-3694)
[»] scaffold0063 (2 HSPs)
scaffold0063 (84-137)||(72407-72460)
scaffold0063 (21-134)||(60842-60955)
[»] scaffold0021 (1 HSPs)
scaffold0021 (18-64)||(168528-168574)
[»] scaffold1212 (1 HSPs)
scaffold1212 (84-136)||(626-678)
[»] scaffold0842 (1 HSPs)
scaffold0842 (57-94)||(4562-4599)
[»] scaffold0247 (2 HSPs)
scaffold0247 (54-135)||(3578-3659)
scaffold0247 (54-94)||(18849-18889)
[»] scaffold0671 (1 HSPs)
scaffold0671 (9-134)||(4188-4306)
[»] scaffold0599 (1 HSPs)
scaffold0599 (54-94)||(3618-3658)
[»] scaffold0180 (2 HSPs)
scaffold0180 (58-94)||(821-857)
scaffold0180 (58-94)||(5141-5177)
[»] scaffold0089 (1 HSPs)
scaffold0089 (58-94)||(857-893)
[»] scaffold0064 (1 HSPs)
scaffold0064 (54-94)||(66519-66559)
[»] scaffold0046 (1 HSPs)
scaffold0046 (54-94)||(14833-14873)
[»] scaffold0012 (1 HSPs)
scaffold0012 (54-94)||(224929-224969)
[»] scaffold0645 (1 HSPs)
scaffold0645 (83-134)||(1402-1454)
[»] scaffold0594 (1 HSPs)
scaffold0594 (101-135)||(1938-1972)
[»] scaffold0453 (1 HSPs)
scaffold0453 (92-134)||(6620-6661)
[»] scaffold0230 (1 HSPs)
scaffold0230 (100-134)||(18616-18650)
[»] scaffold0054 (1 HSPs)
scaffold0054 (100-134)||(67053-67087)
[»] scaffold0032 (1 HSPs)
scaffold0032 (53-134)||(66260-66341)
[»] scaffold0859 (1 HSPs)
scaffold0859 (9-134)||(3017-3142)
[»] scaffold0104 (2 HSPs)
scaffold0104 (83-135)||(8706-8758)
scaffold0104 (83-135)||(19377-19429)


Alignment Details
Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 134 - 329
Target Start/End: Original strand, 26239944 - 26240142
Alignment:
Q  134 actatactccagcacaacgttgttctcaagacctcttgcataaaaggaaaatgtttcttagacaatatattatgtgtgtacttcttgagagagatagcga 233  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  26239944 actatactccagcacaacgttgttctcaagacctcttatataaaaggaaaacgtttcttagacaatatattatgtgtgtacttcttgaaagagatagcga 26240043  T
Q  234 taagagagtgatgtgatatatgtgataagttgataatgtgat---nnnnnnngaagagataaagagttgatgaagtgttgaatgaatgtaggaaaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||           || |||||||||| | ||||||||||||||||||||||||||||||    
T  26240044 taagagagtgatgtgatatatgtgataagttgataatgtgataaaaaaaaaaaaaaagataaagagataatgaagtgttgaatgaatgtaggaaaattt 26240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 15988941 - 15988809
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    |||||| |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  15988941 tgatatcatgaaatgattgaaataaataataattttgctatacttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 15988842  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||| ||||||||||| |||||| |||||||||    
T  15988841 aaaattttcaagttgggaaaacgaggtgttaca 15988809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 33184956 - 33184864
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  33184956 tgatattatgagatgattgaaataaatagtaattttactatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatt 33184864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 4829378 - 4829481
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4829378 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 4829476  T
Q  102 aaaaa 106  Q
    |||||    
T  4829477 aaaaa 4829481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 4832673 - 4832776
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4832673 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 4832771  T
Q  102 aaaaa 106  Q
    |||||    
T  4832772 aaaaa 4832776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 4835969 - 4836071
Alignment:
Q  3 gatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaa 102  Q
    |||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  4835969 gatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgctaa 4836067  T
Q  103 aaaa 106  Q
    ||||    
T  4836068 aaaa 4836071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 10358275 - 10358394
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| |||| |||||||    
T  10358275 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaacatttcaa 10358372  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  10358373 gttgggaaaacggggtgttaca 10358394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 21060969 - 21060844
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| | |||| |  |  ||||||||||||||||| ||||||      
T  21060969 atgagatgattgaaataaatagcaattttactatatttatgtttgaaagaagtgtaacatcctgttttaaat-gtttactctgatttatgc-aaaaaaaa 21060872  T
Q  109 tcaagttggaaaaacggggtgttacact 136  Q
    ||||||||| ||||||| ||||||||||    
T  21060871 tcaagttgggaaaacggagtgttacact 21060844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 20049 - 19926
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||| ||||||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||| || || |||||||||||||||| ||||||| |    
T  20049 atgagatgaatgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttttagtta-tttactctgatttatg-taaaaaaat 19952  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||||||| |||||| ||||||||||    
T  19951 tcaagttgaaaaaacagggtgttaca 19926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 14184106 - 14184033
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14184106 aaatgaatagtaattttactatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatt 14184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 25089765 - 25089646
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  25089765 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gtttttttactctgatttatgc-aaaaaatttcaa 25089668  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  25089667 gttgggaaaacggggtgttaca 25089646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 14187645 - 14187572
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  14187645 aaatgaatagtaattttactatatttacgtttgaaagaagtgtagcattcagtttaaggtgttttactctgatt 14187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 14547724 - 14547605
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||| | |||| |||||||||| |||||||||  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| | ||||||||||    
T  14547724 gatgattaagataattagtaattttactatatttagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgc-ataaaatttcaa 14547627  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  14547626 gttgggaaaacggggtgttaca 14547605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 9872113 - 9872234
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||    |  ||||||||||||||||| |||||| |||||    
T  9872113 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgtttttacttgtttactctgatttatgcaaaaaaaattcaa 9872212  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    |||| |||||||||||||||||    
T  9872213 gttgaaaaaacggggtgttaca 9872234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 51992295 - 51992169
Alignment:
Q  7 ttatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaa 106  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||  |||||||||| |||   || | || | |||||||||||||||||  ||||||    
T  51992295 ttatgagatgattgaaatatatagtaattttgctatatttatggttataagaagtgtatcatcatgtct-agttgttttactctgatttatgtaaaaaaa 51992197  T
Q  107 tttcaagttggaaaaacggggtgttaca 134  Q
     |||||||||| |||||||  |||||||    
T  51992196 attcaagttgggaaaacggaatgttaca 51992169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 4859681 - 4859800
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |   |||||||||||||| ||| | |||| || | |||||||||||||||||| |||||| |||||    
T  4859681 gatgattgagataattagtaattttactatattcaaaattgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 4859778  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||||||| |||||||    
T  4859779 gttgggaaaacgggatgttaca 4859800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 16996640 - 16996521
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| || ||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| ||||||  ||||    
T  16996640 gatgattgagataattattaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaaatcaa 16996543  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  16996542 gttgggaaaacggggtgttaca 16996521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 15607730 - 15607607
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||| ||||||||||  || |  ||||||  |||||||||| |||| ||| | |||||  ||  ||||||||||||||||| ||||||||    
T  15607730 atgagatgattgaa-taaatagtaacgttaccgtatttatatttgaaagaattgtagcatcctgttta--gttgtttactctgatttatgc-aaaaaatt 15607635  T
Q  109 tcaagttggaaaaacggggtgttacact 136  Q
    ||||||||| ||||||||||||||||||    
T  15607634 tcaagttgggaaaacggggtgttacact 15607607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 32467855 - 32467978
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| |||||||||| ||| |||||||||  ||||||||||||||| ||| | ||||   ||  |||||| |||| ||||| ||||||||    
T  32467855 atgagttgattgaa-taaatagtaactttactatatttatatttgaaagaagtgtagcatcctgtttttagttgtttactttgatatatgc-aaaaaatt 32467952  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||||| |||||||||    
T  32467953 tcaagttgggaaaacgaggtgttaca 32467978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 14628610 - 14628498
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaatttcaagttggaa 119  Q
    |||||||||||||||| || ||||||  ||| |||||||||| |||| | ||||||| |  || |||||||||  |||| |||||||||||||||||| |    
T  14628610 aataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttggga 14628513  T
Q  120 aaacggggtgttaca 134  Q
    |||||||||||||||    
T  14628512 aaacggggtgttaca 14628498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 2754512 - 2754472
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  2754512 aaagaagtgtaacattccgtttaaggtgttttactctgatt 2754472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 18210898 - 18210858
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  18210898 aaagaagtgtaacattccgtttaaggtgttttactctgatt 18210858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 30145164 - 30145124
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  30145164 aaagaagtgtaacattccgtttaaggtgttttactctgatt 30145124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 43258993 - 43259033
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  43258993 aaagaagtgtaacattccgtttaaggtgttttactctgatt 43259033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 14046782 - 14046742
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  14046782 aaagaagtgtgacattccgtttaaggtgttttactctgatt 14046742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 24049255 - 24049295
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  24049255 aaagaggtgtaacattccgtttaaggtgttttactctgatt 24049295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 4890013 - 4890047
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||    
T  4890013 taaaaaatttcaagttgggaaaacggggtgttaca 4890047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 14971706 - 14971747
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgattt 95  Q
    |||||||||| |||||||||||||| | ||||||||||||||    
T  14971706 aaagaagtgtgacattccgtttaagttgttttactctgattt 14971747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 16027969 - 16028002
Alignment:
Q  101 aaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||||||||| |||||||||    
T  16027969 aaaaaatttcaagttggaaaaacgaggtgttaca 16028002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 19619078 - 19619114
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||| |||||||| |||||||||||||    
T  19619078 aagtgtaacattccatttaaggtgttttactctgatt 19619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 37017667 - 37017588
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| |||||||||||| | |   ||||| ||||||||||  ||| ||| |||||||| ||||||||||||||||    
T  37017667 aaagaagtgttacattccgtttatgttgaattactttgatttatgcacaaatatt-caagttgggaaaacggggtgttaca 37017588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 14190129 - 14190261
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14190129 tgatattatgaaatgattgaaataaatagtaattttgctatatttacttttgaaagaagtgtaacattccgtttaaggtgttttactctgatttatgcta 14190228  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| ||||||||||||||||    
T  14190229 aaaaatttcaagttgggaaaacggggtgttaca 14190261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 14192887 - 14193019
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14192887 tgatattatgaaatgattgaaattaatagtaattttgctatatttacatttgaaagaagtgtaacattccgtttaaggtgttttactctgatttatgcta 14192986  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||| ||||||||||| ||||||||||||||||    
T  14192987 aaaattttcaagttgggaaaacggggtgttaca 14193019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 15212590 - 15212458
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  15212590 tgatattatgaaatgattgaaataaatagtaattttgttatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 15212491  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||| | ||||||||||||||||    
T  15212490 aaaaatttcaagttaggaaaacggggtgttaca 15212458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 48742350 - 48742220
Alignment:
Q  4 atattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaa 103  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  48742350 atattatgaaatgattaaaataaatagtaattttgctatatttacgtttgaaagaagtgtagtattccgtttaaggtgttttactctgatttatgctaaa 48742251  T
Q  104 aaatttcaagttggaaaaacggggtgttaca 134  Q
    ||| |||||||||| ||||||||||||||||    
T  48742250 aaaattcaagttgggaaaacggggtgttaca 48742220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 13254414 - 13254286
Alignment:
Q  4 atattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaa 103  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13254414 atattatgaaatgattgaaataa-tagtaattttgctatatttacgtttgaa-gaagtgtagcattccgtttaaggtgttttactctgatttatgctaaa 13254317  T
Q  104 aaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||| ||||||||||||||||    
T  13254316 aaatttcaagttgggaaaacggggtgttaca 13254286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 12370470 - 12370350
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | ||||||| |||||||||| ||||||||||||    
T  12370470 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactatgatttatgc-aaaaaatttcaa 12370373  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    ||||| |||||||||||||||||    
T  12370372 gttgggaaaacggggtgttacac 12370350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 15121156 - 15121275
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||| | ||| | |||| || | |||||||||||||| ||| ||||||||||||    
T  15121156 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgcagcatcctgttt-agttgttttactctgatttgtgc-aaaaaatttcaa 15121253  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||    
T  15121254 gttggaaaaacggggtgttaca 15121275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 44373115 - 44372996
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||| | |||| || | |||||||||||||||||| |||||| |||||    
T  44373115 gatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 44373018  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    |||| |||||||||||||||||    
T  44373017 gttgaaaaaacggggtgttaca 44372996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 44381971 - 44381852
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||| | |||| || | |||||||||||||||||| |||||| |||||    
T  44381971 gatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 44381874  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    |||| |||||||||||||||||    
T  44381873 gttgaaaaaacggggtgttaca 44381852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 32997062 - 32996939
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||  ||| | |||| | ||  |||||||||||||||| |||||||||    
T  32997062 atgagatgattgaaataaatagtaactttactatatttatatttgaaagaagtgtggcatcctgtttta-gttgtttactctgatttatg-taaaaaatt 32996965  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||| | ||||||||||||||||    
T  32996964 tcaagttaggaaaacggggtgttaca 32996939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 36706515 - 36706634
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||||||||||||| | ||  |||||||||| ||| | ||||||  | |||||||||||||||||| |||||| |||||    
T  36706515 gatgattgaaataaatagtaattttgctatatttatgattataagaagtgtagcatcctgtttaa-ttgttttactctgatttatgc-aaaaaaattcaa 36706612  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||||| |||||||||    
T  36706613 gttgggaaaacgaggtgttaca 36706634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 17131352 - 17131475
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||||  ||  |||||||||| ||||||| |||||||    
T  17131352 atgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttta--gttgtttactctgattttatgc-aaaaaat 17131448  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| ||||||  ||||||||    
T  17131449 ttcaagttgggaaaacgttgtgttaca 17131475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 13151476 - 13151595
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| || |||| ||| | |||| || | |||||||||||||||||| ||||||||| ||    
T  13151476 gatgattgaaataaatagtaattttactatattcatatttgaaaaaaatgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaattttaa 13151573  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  13151574 gttgggaaaacggggtgttaca 13151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 36687104 - 36687227
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatg---ctaaaaaattt 109  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||   | ||||||  |    
T  36687104 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgcaacaaaaaaaaat 36687202  T
Q  110 caagttggaaaaacggggtgttaca 134  Q
    |||||||| ||||||||||||||||    
T  36687203 caagttgggaaaacggggtgttaca 36687227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 4070176 - 4070052
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||| ||||| |||||| |||| | ||  ||||||||||||| |   |||| |||    
T  4070176 atgagatgattgaaataaatagtaattttactatatttatatttgaaagtagtgtgacattctgtttta-gttgtttactctgattttttgcaaaatatt 4070078  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    | ||||||| ||||| ||||||||||    
T  4070077 ttaagttgggaaaacagggtgttaca 4070052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 14553055 - 14552932
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||| | ||| | |||| | ||  |||||||| ||||| || ||||||||    
T  14553055 atgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgcagcatcctgtttta-gttgtttactctcatttacgc-aaaaaatt 14552958  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||  ||||||||||    
T  14552957 tcaagttgggaaaatagggtgttaca 14552932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 15719059 - 15718940
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  15719059 gatgattgagataattagtaattttactatattcagatttgaaagaaatgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 15718962  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  15718961 gttgggaaaaccgggtgttaca 15718940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 32435365 - 32435484
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  |||||||||||| || ||| | |||| || | |||||||||||||||||| |||||  |||||    
T  32435365 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtatagcatcctgttt-agttgttttactctgatttatgc-aaaaagattcaa 32435462  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  32435463 gttgggaaaacagggtgttaca 32435484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 14220847 - 14220966
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| |||||||||| ||| |||||||||  ||||||||||||||||||||| |||||  ||  ||||||||||| ||||| ||||||||    
T  14220847 atgagttgattgaa-taaatagtaactttactatatttatatttgaaagaagtgtaacattctgttta--gtcgtttactctgatatatgc-aaaaaatt 14220942  T
Q  109 tcaagttggaaaaacggggtgtta 132  Q
    ||||||||| |||| || ||||||    
T  14220943 tcaagttgggaaaatggagtgtta 14220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 19280921 - 19280801
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| || | |||||||||| ||||||| |  ||||||||||||||||||| | |||| || | ||||||||||||||||     ||| ||||||    
T  19280921 gatgattgagatgattagtaattttactatattcagatttgaaagaagtgtaacatcctgttt-agttgttttactctgatttatatgtgaaattttcaa 19280823  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||||||||| ||||||||||    
T  19280822 gttggaaaaacagggtgttaca 19280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 11084631 - 11084553
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    ||||||| ||||||||||||||| |||||||||||||| |   | ||| ||||||||||| ||||||| ||||||||||    
T  11084631 aagtgtagcattccgtttaaggtgttttactctgatttttatgagaaactttcaagttgggaaaacggtgtgttacact 11084553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 13700560 - 13700680
Alignment:
Q  12 agatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttca 111  Q
    ||||||||||| |||||| ||| |||  ||||||||  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| || || |||||    
T  13700560 agatgattgaa-taaataataactttattatatttatatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaagaattttca 13700657  T
Q  112 agttggaaaaacggggtgttaca 134  Q
    |||||  ||||||| ||||||||    
T  13700658 agttgagaaaacggagtgttaca 13700680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 10660866 - 10660983
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||||||||||| || ||| |||||||||          ||||||| ||| | |||| || | ||||||| |||||||||| ||||||||    
T  10660866 atgagatgattgaaataaatagcaactttactatattta----------aagtgtagcatcctgttttagttgttttactttgatttatgc-aaaaaatt 10660954  T
Q  109 tcaagttggaaaaacggggtgttacacta 137  Q
    ||||||||| |||||||||||| ||||||    
T  10660955 tcaagttgggaaaacggggtgtgacacta 10660983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 16004292 - 16004211
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  16004292 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacac 16004211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 145827 - 145787
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  145827 aaagaagtgtaacattccgtttaaggtgttttactctgatt 145787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 16110675 - 16110715
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  16110675 aaagaagtgtaacattccgtttaaggtgttttactctgatt 16110715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 30822892 - 30822976
Alignment:
Q  53 gaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagtt-ggaaaaacggggtgttacact 136  Q
    |||||||||||| ||||||||||||||| ||||||| |||||| |   | ||| ||||||||| |||||||||||| ||||||||    
T  30822892 gaaagaagtgtagcattccgtttaaggtgttttactttgatttttatgagaaattttcaagttgggaaaaacggggggttacact 30822976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 34956344 - 34956304
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  34956344 aaagaagtgtaacattccgtttaaggtgttttactctgatt 34956304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 11092386 - 11092307
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| ||||| ||||||||| ||||||| |||||| |   | ||| ||||||||||| ||||||||||||||||    
T  11092386 aagaagtgtagcattctgtttaaggtgttttactttgatttttatgagaaattttcaagttgggaaaacggggtgttaca 11092307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 15578586 - 15578621
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  15578586 taaaaaatttcaagttggaaaaacggggtgttacac 15578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 11065599 - 11065515
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatg 98  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| || |||| ||| | |||| || | |||||||||||||||||    
T  11065599 gatgattgaaataaatagtaattttactatattcatatttgaaacaactgtagcatcctgttt-agttgttttactctgatttatg 11065515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 20584425 - 20584333
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaa 106  Q
    ||||||||| |||| |||||||||| ||||| | |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| ||||||    
T  20584425 gatgattgagataattagtaattttactatactcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgcaaaaaaa 20584333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 834744 - 834784
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  834744 aaagaagtgtaacattccatttaaggtgttttactctgatt 834784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 854785 - 854825
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  854785 aaagaagtgtaacattccatttaaggtgttttactctgatt 854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 1199924 - 1199964
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  1199924 aaagaagtgtaacattccatttaaggtgttttactctgatt 1199964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 1212789 - 1212829
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  1212789 aaagaagtgtaacattccatttaaggtgttttactctgatt 1212829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 11659602 - 11659562
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  11659602 aaagaggtgtaacattccgtttaaggtgttttactctgatt 11659562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 14420015 - 14419975
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  14420015 aaagaagtgtaacattccgtttaaggtgttttagtctgatt 14419975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 16252441 - 16252477
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  16252441 aagtgtaacattccgtttaaggtgttttactctgatt 16252477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 4692544 - 4692578
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||    
T  4692544 taaaaaatttcaagttgggaaaacggggtgttaca 4692578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 13134759 - 13134886
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaa 106  Q
    |||||||| ||| ||| |||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| |  || |||||||||  |||| ||||||     
T  13134759 atgagatgtttggaatcaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaat 13134856  T
Q  107 tttcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||| ||||||||||||||||||    
T  13134857 tttcaagttgggaaaacggggtgttacact 13134886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 13890887 - 13890806
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaat-ttcaagttggaaaaacggggtgttacac 135  Q
    |||||| |||||||||||||||||||| ||||||| ||||| ||  ||  |||| || | |||||||||||||||||||||||    
T  13890887 aaagaaatgtaacattccgtttaaggttttttactttgattaat-ttatgaaatctttatgttggaaaaacggggtgttacac 13890806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 37786147 - 37786201
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgt 63  Q
    ||||||||| ||||||||||||||| ||| |||||||||  ||| ||||||||||    
T  37786147 atgagatgactgaaataaatagtaaatttactatatttatattttaaagaagtgt 37786201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 21244865 - 21244733
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  21244865 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 21244766  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| ||||||||||||||||    
T  21244765 aaaaatttcaagttgggaaaacggggtgttaca 21244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 26895359 - 26895227
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  26895359 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 26895260  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||| |||||||||||||||||    
T  26895259 aaaaaattcaagttgaaaaaacggggtgttaca 26895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 26900798 - 26900666
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  26900798 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 26900699  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||| |||||||||||||||||    
T  26900698 aaaaaattcaagttgaaaaaacggggtgttaca 26900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 19803151 - 19803018
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19803151 tgatattatgaaatgattgaaataaatagtaattttgttatatttacgttttaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 19803052  T
Q  102 a-aaaatttcaagttggaaaaacggggtgttaca 134  Q
    | ||||||||||||||| ||||||||||||||||    
T  19803051 aaaaaatttcaagttgggaaaacggggtgttaca 19803018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 10898660 - 10898778
Alignment:
Q  8 tatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaat 107  Q
    |||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||| ||| |  ||| || | |||||||||||||||||| ||||||     
T  10898660 tatgagatgattgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctattttagttgttttactctgatttatgcaaaaaaaa 10898759  T
Q  108 ttcaagttggaaaaacggg 126  Q
    |||||||||||||||||||    
T  10898760 ttcaagttggaaaaacggg 10898778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 22702126 - 22702022
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatg-ct 100  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  22702126 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgact 22702028  T
Q  101 aaaaaa 106  Q
    ||||||    
T  22702027 aaaaaa 22702022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 35338566 - 35338628
Alignment:
Q  343 ttcatggatacaaaacatattcccaggaattcttggatgggaattaagattccagtgtttgtt 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35338566 ttcatggatacaaaacatattcccaggaattcttggatgggaattaagattccagtgtttgtt 35338628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 2524520 - 2524639
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| ||||||||||||    
T  2524520 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtatcatcctgttt-agttgttttactctgatttatgc-aaaaaatttcaa 2524617  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  2524618 gttgggaaaacagggtgttaca 2524639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 19357234 - 19357111
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| | ||  |||||||| |||||||| |||||| |    
T  19357234 atgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctaatttatgc-aaaaaaat 19357137  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  19357136 tcaagttgggaaaacggggtgttaca 19357111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 24782808 - 24782928
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||| ||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | ||||||||||||||||   ||||||||||||    
T  24782808 gatgattgaaataaatattaattttactatattcatatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatagcaaaaaatttcaa 24782906  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  24782907 gttgggaaaacggggtgttaca 24782928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 18390105 - 18390232
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  | | ||||||||||| ||| | | ||   ||  ||||||||||||||||  ||||||||    
T  18390105 atgagatgattgaaataaatagtaattttactatatttatatattaaagaagtgtagcatcctggttttagttgtttactctgatttatgg-aaaaaatt 18390203  T
Q  109 tcaagttggaaaaacggggtgttacacta 137  Q
    ||||||||| |||||||||||||||||||    
T  18390204 tcaagttgggaaaacggggtgttacacta 18390232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 22670984 - 22670861
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||| ||||||||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||| || | ||||||||||||||||||  ||||| |    
T  22670984 atgagattattgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttttagttgttttactctgatttatgc--aaaaaat 22670887  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||| |||| |||| |||||||||||    
T  22670886 tcaaattgggaaaatggggtgttaca 22670861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 17305609 - 17305490
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| ||||| |||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||| ||| ||||||||||||    
T  17305609 gatgattgagataattagtacttttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttttgc-aaaaaatttcaa 17305512  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||    
T  17305511 gttggaaaaacggggtgttaca 17305490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 23759734 - 23759617
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| || ||| || | ||||||||| |||||||| ||||||||||||    
T  23759734 gatgattgacataattagtaattttactatattcagatttgaaagaagtgtagcat-cctttttagttgttttactctaatttatgc-aaaaaatttcaa 23759637  T
Q  113 gttggaaaaacggggtgtta 132  Q
    ||||| ||||||||||||||    
T  23759636 gttgggaaaacggggtgtta 23759617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 5984571 - 5984448
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||| ||| ||||| ||   || |||||||||||| ||| | |||| | ||  ||||||||||||||||| ||||||||    
T  5984571 atgagatgattgaaataaatagtaactttactataattgtattcgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgc-aaaaaatt 5984474  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||  ||||||||||||||||    
T  5984473 tcaagttgagaaaacggggtgttaca 5984448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 24514368 - 24514249
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| ||||||  ||||    
T  24514368 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaaatcaa 24514271  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  24514270 gttgggaaaacggggtgttaca 24514249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 28654482 - 28654601
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| |||||| |||||    
T  28654482 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 28654579  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||| |||||||||||    
T  28654580 gttgggaaaatggggtgttaca 28654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 36838306 - 36838187
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  36838306 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 36838209  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  36838208 gttgggaaaacagggtgttaca 36838187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 25084582 - 25084463
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| | ||||| |  |||||||||||||||  | |||  || || | |||||||||||||||||| |||||| || ||    
T  25084582 gatgattgaaataaatagtaattttaccatattcatatttgaaagaagtgtagta-tcctatttagttgttttactctgatttatgcaaaaaaaatt-aa 25084485  T
Q  113 gttggaaaaacggggtgttaca 134  Q
     |||| ||||||||||||||||    
T  25084484 attgggaaaacggggtgttaca 25084463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 27058488 - 27058540
Alignment:
Q  82 ttttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  27058488 ttttactctgatttatgc-aaaaaatttaaagttggaaaaacggggtgttacac 27058540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 5033265 - 5033383
Alignment:
Q  17 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgc--taaaaaatttcaagt 114  Q
    |||||||||||||||||||||  |||||| |  ||||||||||||||| ||| | |||| || | |||||| |||||||||||   ||||||  ||||||    
T  5033265 attgaaataaatagtaattttattatattcatatttgaaagaagtgtagcatcctgttt-agttgttttaccctgatttatgcaacaaaaaaaatcaagt 5033363  T
Q  115 tggaaaaacggggtgttaca 134  Q
    ||| ||||||||||||||||    
T  5033364 tgggaaaacggggtgttaca 5033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 19665301 - 19665381
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||||||||||||||||||||    
T  19665301 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttggaaaaacggggtgttaca 19665381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 25044379 - 25044328
Alignment:
Q  82 ttttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  25044379 ttttactctgatttatgc-aaaaaatttcaagttgggaaaacggggtgttaca 25044328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 22253517 - 22253630
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| || | |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||| | |||||| |||||    
T  22253517 gatgattgagattattagtaattttactatattcaaatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatac-aaaaaaattcaa 22253614  T
Q  113 gttggaaaaacggggt 128  Q
    ||||| ||||||||||    
T  22253615 gttgggaaaacggggt 22253630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 12629640 - 12629693
Alignment:
Q  53 gaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaa 106  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| | ||||||    
T  12629640 gaaagaagtgtagcattccgtttaaggtgttttactctgatttatacaaaaaaa 12629693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 6262921 - 6262961
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  6262921 aaagaagtgtaacattccgtttaaggtgttttactctgatt 6262961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 18872910 - 18872950
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  18872910 aaagaagtgtaacattccgtttaaggtgttttactctgatt 18872950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 19664342 - 19664382
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  19664342 aaagaagtgtaacattccgtttaaggtgttttactctgatt 19664382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 21078113 - 21078153
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21078113 aaagaagtgtaacattccgtttaaggtgttttactctgatt 21078153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 44070873 - 44070823
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  44070873 ttactctgattttatg-taaaaaatttcaagttggaaaaacggggtgttaca 44070823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 9240013 - 9239973
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  9240013 aaagaagtgtaacattccgttgaaggtgttttactctgatt 9239973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 27039849 - 27039900
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    ||||||||||||| ||||||||||||||||||||| | ||  ||||||||||    
T  27039849 gatgattgaaatatatagtaattttgctatatttatgattataagaagtgta 27039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 14692679 - 14692629
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaa 59  Q
    ||||||||||||||||||||||||| ||| ||||||| |  ||||||||||    
T  14692679 atgagatgattgaaataaatagtaactttactatattcatatttgaaagaa 14692629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 22258266 - 22258232
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||    
T  22258266 taaaaaatttcaagttgggaaaacggggtgttaca 22258232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 24740478 - 24740512
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||    
T  24740478 taaaaaatttcaagttgggaaaacggggtgttaca 24740512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 13102536 - 13102573
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctg 91  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  13102536 aaagaaatgtaacattccgtttaaggtgttttactctg 13102573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 24669888 - 24669836
Alignment:
Q  82 ttttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||||| |||||| || | ||||| |||||||||||||||||    
T  24669888 ttttactctgatttatgcaaaaaaaatt-atgttgggaaaacggggtgttacac 24669836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 24783125 - 24783158
Alignment:
Q  101 aaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||| ||||||||||||||||    
T  24783125 aaaaaatttcaagttgggaaaacggggtgttaca 24783158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 27850934 - 27850897
Alignment:
Q  101 aaaaaatttcaagttggaaaaacggggtgttacactat 138  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  27850934 aaaaaatttcaagttaggaaaacggggtgttacactat 27850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 13027530 - 13027662
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  13027530 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 13027629  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| |||| |||||||||||    
T  13027630 aaaaatttcaagttgggaaaatggggtgttaca 13027662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 21081599 - 21081467
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  21081599 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacatttcgtttaaggtgttttactctgatttatgcta 21081500  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||  | | ||||||||||||||||||||||    
T  21081499 aaaaaaattatgttggaaaaacggggtgttaca 21081467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 1990396 - 1990500
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  1990396 tgatattatgaaatgcttgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 1990495  T
Q  102 aaaaa 106  Q
    |||||    
T  1990496 aaaaa 1990500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 16326448 - 16326541
Alignment:
Q  4 atattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatg 98  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  16326448 atattatgaaatgattgaaataa-tagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatg 16326541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 34853719 - 34853822
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    |||| |||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34853719 tgatgttatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtaacattccgtttaaggtgttttactctgatttatgcta 34853817  T
Q  102 aaaaa 106  Q
    |||||    
T  34853818 aaaaa 34853822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 22308522 - 22308642
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    |||||||| |||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| ||||||||||||    
T  22308522 gatgattgtaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaatttcaa 22308619  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    ||||||||||| |||||||||||    
T  22308620 gttggaaaaacagggtgttacac 22308642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 16727615 - 16727490
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| ||||||| |  |||| |||||||||| ||| | |||| || | ||||||||| |||||||| |||||| |    
T  16727615 atgagatgattgaaataaatagtaattttactatattcatatttgtaagaagtgtagcatcctgttttagttgttttactctaatttatgcaaaaaaaat 16727516  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||| || ||||||||    
T  16727515 tcaagttgggaaaatggagtgttaca 16727490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 14440219 - 14440100
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    |||||||||||||||| |||||||| |||||||    ||||||||||||||| ||| | ||||| | | |||||||||||||||||| |||||||| |||    
T  14440219 gatgattgaaataaattgtaattttactatattcttatttgaaagaagtgtatcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caa 14440122  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  14440121 gttgggaaaacggggtgttaca 14440100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 15025178 - 15025301
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||| | ||| |||||||||  ||| ||||||||||| ||| | |||| | ||  |||||||||||||||| ||||||| |    
T  15025178 atgagatgattgaaataaatagttactttactatatttatatttaaaagaagtgtagcatcctgtttta-gttgtttactctgatttatg-taaaaaaat 15025275  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  15025276 tcaagttgggaaaacggggtgttaca 15025301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 20416562 - 20416439
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||| | |||| ||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| |||||| |    
T  20416562 atgagatgattgaaataaatagtaattctactatgtttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgc-aaaaaaat 20416465  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||| ||||||||    
T  20416464 tcaagttgggaaaacggagtgttaca 20416439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 42328169 - 42328287
Alignment:
Q  14 atgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaag 113  Q
    |||||||||||| ||||||||||||||||||||| | ||  |||||||||| ||| | |||| || | |||||||||||||||||| |||||| ||||||    
T  42328169 atgattgaaatatatagtaattttgctatatttatgattataagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaag 42328266  T
Q  114 ttggaaaaacggggtgttaca 134  Q
    |||| |||| |||||||||||    
T  42328267 ttgggaaaatggggtgttaca 42328287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 52312197 - 52312320
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| |||   | |||  ||  |||||||||| ||||||| |||||||    
T  52312197 atgagatgattgaaataaatagtaattttactatatttatattttaaagaagtgtagcatcatgatta--gttgtttactctgattttatgcaaaaaaat 52312294  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    || ||||||||||||||||||||||||    
T  52312295 tt-aagttggaaaaacggggtgttaca 52312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 4874740 - 4874624
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  4874740 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttta-gctgttttactctgatttatgc-aaaaaatttcaa 4874643  T
Q  113 gttggaaaaacggggtgtt 131  Q
    ||||| |||||||||||||    
T  4874642 gttgggaaaacggggtgtt 4874624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 17325850 - 17325971
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||| ||||| |||||| |||||    
T  17325850 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatctatgcaaaaaaaattcaa 17325948  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    ||||  |||||||||||||||||    
T  17325949 gttgagaaaacggggtgttacac 17325971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 44268618 - 44268498
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | ||||||||||||||||| ||||||| |||||    
T  44268618 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatg-taaaaaaattcaa 44268521  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    |||||  ||||||||||||||||    
T  44268520 gttggggaaacggggtgttacac 44268498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 2843341 - 2843460
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||||  ||||| | |   |||||||||||||||| ||||||||||||    
T  2843341 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcattatgttta-gttgaattactctgatttatgc-aaaaaatttcaa 2843438  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    |||||||||||||| |||||||    
T  2843439 gttggaaaaacgggatgttaca 2843460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 8493080 - 8493203
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||| ||||| |||| ||||   |||||||||||  | ||| | |||| || | ||| ||||||||| |||| ||||||||    
T  8493080 atgagatgattgaaataaatagtcattttactatgtttatacttgaaagaagtacagcatcctgttttagttgttt-actctgattcatgc-aaaaaatt 8493177  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||||||    
T  8493178 tcaagttggaaaaacggggtgttaca 8493203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 35066442 - 35066565
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| ||||||||| ||||||||||||| |||||||||  ||||||||||||| | ||| | |||| | ||  ||||||||||||||||| |||||| |    
T  35066442 atgagttgattgaaacaaatagtaattttactatatttatatttgaaagaagtgcatcatcctgtttta-gttgtttactctgatttatgc-aaaaaaat 35066539  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||||| |||||||||    
T  35066540 tcaagttgggaaaacgaggtgttaca 35066565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 41174428 - 41174547
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| |||||| |||||    
T  41174428 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 41174525  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||||||| |||||||    
T  41174526 gttgggaaaacgggatgttaca 41174547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 53647758 - 53647878
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||| ||||||||||||||| | |||| || | ||||||| |||||||||| |||||| ||||     
T  53647758 gatgattgaaataaatagtaattttactatattcatatttaaaagaagtgtaacatcctgttt-agttgttttactttgatttatgcaaaaaaaattcat 53647856  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||  |||||||| |||||||    
T  53647857 gttgagaaaacgggatgttaca 53647878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 4853006 - 4852890
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | |||| || | |||||||||||||||||| |||||| |||||    
T  4853006 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 4852909  T
Q  113 gttggaaaaacggggtgtt 131  Q
    ||||| |||||||||||||    
T  4852908 gttgggaaaacggggtgtt 4852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 12507710 - 12507833
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||  ||||| |||| ||| | |||| || | |||||||||||||||||  ||||||      
T  12507710 atgagatgattgaaatatatagtaattttgctatatttatgattataagaaatgtagcatcctgttt-agttgttttactctgatttatg-aaaaaaaaa 12507807  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||||| |||||||||    
T  12507808 tcaagttgggaaaacgtggtgttaca 12507833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 9643674 - 9643551
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||||||||||||||||| ||||| |||||||||  ||| ||||||||||| ||| | |||| || | ||||||| ||| ||||||| ||||||     
T  9643674 atgagatgattgaaataaatagt-attttactatatttatattttaaagaagtgtagcatcctgttt-agttgttttactatgattttatgc-aaaaaaa 9643578  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| ||||| ||||||||||    
T  9643577 ttcaagttgggaaaacagggtgttaca 9643551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 19574125 - 19574002
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgattt-atgctaaaaaat 107  Q
    |||||||||||||||| |||||||||||| |||||| ||  ||  ||||||||||| ||| | ||||   ||  ||||||||||||| |||| |||||||    
T  19574125 atgagatgattgaaattaatagtaattttactatatatatatt--aaagaagtgtagcatcctgtttttagttgtttactctgattttatgcaaaaaaat 19574028  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    | |||||||| ||||||||||||||||    
T  19574027 t-caagttgggaaaacggggtgttaca 19574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 36526926 - 36526859
Alignment:
Q  5 tattatgagatgattgaaa-taaatagtaattttgctatatttacgtttgaaagaagtgtaacattcc 71  Q
    |||||||| | |||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||    
T  36526926 tattatgaaacgattgaaaatgaatagtaattttactatatttacgtttgaaagaagtgtagcattcc 36526859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 3801264 - 3801224
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  3801264 aaagaagtgtaacattccgtttaaggtgttttactctgatt 3801224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 16840887 - 16840927
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  16840887 aaagaagtgtaacattccgtttaaggtgttttactctgatt 16840927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 20250617 - 20250657
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  20250617 aaagaagtgtaacattccgtttaaggtgttttactctgatt 20250657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 51609063 - 51609103
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  51609063 aaagaagtgtaacattccgtttaaggtgttttactctgatt 51609103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3265950 - 3266020
Alignment:
Q  5 tattatgagatgattgaaa-taaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtt 74  Q
    |||||||| | |||||||| | |||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  3265950 tattatgaaacgattgaaaatgaatagtaattttactatatttatgtttgaaagaagtatagcattccgtt 3266020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 12513741 - 12513778
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatattt 46  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12513741 atgagatgattgaaatatatagtaattttgctatattt 12513778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 19885677 - 19885769
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaa 106  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | |||| || | |||||||||||||||||| ||||||    
T  19885677 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttt-agttgttttactctgatttatgcaaaaaaa 19885769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 10556298 - 10556258
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  10556298 aaagaagtgtaacattctgtttaaggtgttttactctgatt 10556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 11911964 - 11911924
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  11911964 aaagaagtgtaatattccgtttaaggtgttttactctgatt 11911924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 24341509 - 24341545
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactct 90  Q
    ||||||||||||||||||||||||||| |||||||||    
T  24341509 aaagaagtgtaacattccgtttaaggtgttttactct 24341545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 29546788 - 29546828
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  29546788 aaagaagtgtaacattctgtttaaggtgttttactctgatt 29546828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 38313630 - 38313670
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  38313630 aaagaaatgtaacattccgtttaaggtgttttactctgatt 38313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 13178704 - 13178653
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  13178704 ttactctgattttatgcaaaaaaatatcaagttggataaacggggtgttaca 13178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 17259847 - 17259898
Alignment:
Q  85 tactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    |||||||||||  |  ||||||||||||||||| ||||||||||||||||||    
T  17259847 tactctgattttaggcaaaaaatttcaagttgggaaaacggggtgttacact 17259898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 23273951 - 23273872
Alignment:
Q  56 agaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  23273951 agaagtgtagcattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacac 23273872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24554133 - 24554245
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga--tttatgctaaaaaatttcaagttggaa 119  Q
    |||||||||||||||| || ||||||  ||| |||| |||||||||| | |||| | ||  ||||||||||  ||||||| ||||| ||||||||||| |    
T  24554133 aataaatagtaattttactctatttatcttttaaagtagtgtaacatcctgtttta-gttgtttactctgatgtttatgc-aaaaactttcaagttggga 24554230  T
Q  120 aaacggggtgttaca 134  Q
    ||||||| |||||||    
T  24554231 aaacgggatgttaca 24554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24557195 - 24557307
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga--tttatgctaaaaaatttcaagttggaa 119  Q
    |||||||||||||||| || ||||||  ||| |||| |||||||||| | |||| | ||  ||||||||||  ||||||| ||||| ||||||||||| |    
T  24557195 aataaatagtaattttactctatttatcttttaaagtagtgtaacatcctgtttta-gttgtttactctgatgtttatgc-aaaaactttcaagttggga 24557292  T
Q  120 aaacggggtgttaca 134  Q
    ||||||| |||||||    
T  24557293 aaacgggatgttaca 24557307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 11561293 - 11561241
Alignment:
Q  83 tttactctgat--ttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||  |||||| |||||||| |||||||||||||||||||||||||    
T  11561293 tttactctgatgtttatgcaaaaaaatt-caagttggaaaaacggggtgttaca 11561241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 17206178 - 17206136
Alignment:
Q  93 tttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  17206178 tttatgcaaaaaaaattcaagttgggaaaacggggtgttacac 17206136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 18898736 - 18898702
Alignment:
Q  60 gtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||| |||||||||||||    
T  18898736 gtgtaacattccgtttaaggtgttttactctgatt 18898702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 1209627 - 1209684
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaag 78  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| |||||| |||||||    
T  1209627 aaataaatagtaattttactctatttatcttttaaagaagtgtgacattctgtttaag 1209684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 5213953 - 5213861
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaa 106  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||| ||||||| ||| | ||||| | | ||||||||||||| |||| ||||||    
T  5213953 gatgattgagataattagtaattttactatattcagatttgaaaaaagtgtagcatcctgttta-gttgttttactctgattcatgcaaaaaaa 5213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 10952966 - 10952998
Alignment:
Q  62 gtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||| |||||||||||||    
T  10952966 gtaacattccgtttaaggtgttttactctgatt 10952998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 23172761 - 23172721
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||| ||||||||||||| |||||||| ||||    
T  23172761 aaagaagtgtaacgttccgtttaaggtgttttactcggatt 23172721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 21652517 - 21652385
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  21652517 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 21652418  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||| |||||||||| ||||||||||||||||    
T  21652417 aaaaaattcaagttgggaaaacggggtgttaca 21652385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 12359947 - 12360040
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgattt 95  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  12359947 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaagatgttttactctgattt 12360040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 28131721 - 28131648
Alignment:
Q  332 ggggtgtttgtttcatggatacaaaacatattcccaggaattcttggatgggaattaagattccagtgtttgtt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28131721 ggggtgtttgtttcatggatacaaaacatattcccaggaattcttggatgggaattaagattccagtgtttgtt 28131648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 22348810 - 22348686
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| ||| | |||| || | ||||||||||| ||||||| |||||||    
T  22348810 atgagatgattgaaataaatagtaattttactatatttatattttaaagaagtgtagcatcctgttt-agttgttttactctgattttatgc-aaaaaat 22348713  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| || | |||||||||||    
T  22348712 ttcaagttgggaatatggggtgttaca 22348686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 38888996 - 38889115
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| |||||| |||||    
T  38888996 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgtttgagttgttttactctgatttatgc-aaaaaaattcaa 38889094  T
Q  113 gttggaaaaacggggtgttac 133  Q
    ||||  |||||||||||||||    
T  38889095 gttgcgaaaacggggtgttac 38889115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 19674827 - 19674700
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttact-ctgatttatgctaaaaaat 107  Q
    |||||||||||||||| |||||||| ||| ||||||||   ||||||||||||||| ||| | |||| || |  |||||| ||||||||||| ||||||     
T  19674827 atgagatgattgaaatgaatagtaactttactatatttgtatttgaaagaagtgtagcatcctgttttagtttgtttacttctgatttatgcaaaaaaaa 19674728  T
Q  108 ttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||  |||||||||||||||||    
T  19674727 ttcaagttgagaaaacggggtgttacac 19674700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 8277942 - 8278062
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| ||| |||||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| |||| |||||||    
T  8277942 gatgattgagataattaggaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaagatttcaa 8278039  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    ||||| |||||||||||||||||    
T  8278040 gttgggaaaacggggtgttacac 8278062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 136
Target Start/End: Complemental strand, 48300041 - 48299920
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| |||||| |||||    
T  48300041 gatgattgagataattagtaattttactatattcagctttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 48299944  T
Q  113 gttggaaaaacggggtgttacact 136  Q
    || || ||||| ||||||||||||    
T  48299943 gtggggaaaacagggtgttacact 48299920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 24725763 - 24725644
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| |||||||||| ||| |||||||||  |||||||||||||||||||    ||||  ||  ||||||||||||||||| ||||||||    
T  24725763 atgagttgattgaa-taaatagtaactttactatatttatatttgaaagaagtgtaacatcatattta--gttgtttactctgatttatgc-aaaaaatt 24725668  T
Q  109 tcaagttggaaaaacggggtgtta 132  Q
    ||||||| |||||| |||||||||    
T  24725667 tcaagttagaaaaatggggtgtta 24725644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 1641745 - 1641624
Alignment:
Q  12 agatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgattt-atgctaaaaaatttc 110  Q
    |||||| ||||||||||||||| ||| |||||||||  ||| ||||||||||| |||   ||||| | | ||||||| |||||| |||| ||||||||||    
T  1641745 agatgactgaaataaatagtaactttactatatttatattttaaagaagtgtagcatcttgttta-gttgttttactatgattttatgc-aaaaaatttc 1641648  T
Q  111 aagttggaaaaacggggtgttaca 134  Q
    || |||||||||||||||||||||    
T  1641647 aaattggaaaaacggggtgttaca 1641624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 4597922 - 4598043
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta-aaaaatttca 111  Q
    ||||||||| |||| |||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | | |||||||||||||||||| | |||||  |||    
T  4597922 gatgattgagataattagtaattttactatattcagatttgaaagaaatgtagcatcctgttta-gttgttttactctgatttatgcaacaaaaaaatca 4598020  T
Q  112 agttggaaaaacggggtgttaca 134  Q
    |||||| ||||||||||||||||    
T  4598021 agttgggaaaacggggtgttaca 4598043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 24724443 - 24724566
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||||||||||||||||||||||| |||||||||  | | |||| ||||||  ||   |||||  ||  |||||||||| ||||||| ||||||     
T  24724443 atgagatgattgaaataaatagtaattttactatatttatatattaaagtagtgtagtatcatgttta--gttgtttactctgattttatgc-aaaaaaa 24724539  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| ||||||||||||||||    
T  24724540 ttcaagttgggaaaacggggtgttaca 24724566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 16060238 - 16060358
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||||||| | ||||   ||  ||||||||||| || | | |||  ||||||    
T  16060238 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtaacatccagtttttagttgtttactctgatataag-tgaaatttttcaa 16060336  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  16060337 gttgggaaaacggggtgttaca 16060358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 16370229 - 16370189
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  16370229 aaagaagtgtaacattccgtttaaggtgttttactctgatt 16370189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 21341428 - 21341388
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21341428 aaagaagtgtaacattccgtttaaggtgttttactctgatt 21341388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 29533279 - 29533239
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  29533279 aaagaagtgtaacattccgtttaaggtgttttactctgatt 29533239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 42910998 - 42910947
Alignment:
Q  82 ttttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  42910998 ttttactctgatttatgc-aaaaaatttcaagttgggaaaatggggtgttaca 42910947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 44890778 - 44890665
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaatttcaagttggaa 119  Q
    |||||||||||||||| || ||||||  ||| |||||||||| ||||   ||||||| |    ||||||||||  |||| ||||||||||||||||||||    
T  44890778 aataaatagtaattttactctatttatcttttaaagaagtgtgacatcttgtttaag-tcgaatactctgattattatg-taaaaaatttcaagttggaa 44890681  T
Q  120 aaacggggtgttacac 135  Q
    ||||||||||||||||    
T  44890680 aaacggggtgttacac 44890665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 45753907 - 45753852
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    ||||||||||||||||||||||||||||| |||| ||||  |||||||||| ||||    
T  45753907 atgagatgattgaaataaatagtaattttactatgtttatatttgaaagaaatgta 45753852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 51475271 - 51475216
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    ||||||||||||||||| ||||||||||| |||||||||  ||| |||||||||||    
T  51475271 atgagatgattgaaatatatagtaattttactatatttatattttaaagaagtgta 51475216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 13301163 - 13301131
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgtta 132  Q
    |||||||||||||||||||||||||||||||||    
T  13301163 taaaaaatttcaagttggaaaaacggggtgtta 13301131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 32648359 - 32648319
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  32648359 aaagaagtgtaacattccgtttaagttgttttactctgatt 32648319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 42696159 - 42696104
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    ||||||||||||||||||||||||||||| |||| ||||   |||||| |||||||    
T  42696159 atgagatgattgaaataaatagtaattttactatgtttatacttgaaaaaagtgta 42696104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 17904995 - 17905029
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||    
T  17904995 taaaaaatttcaagttgggaaaacggggtgttaca 17905029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 31611587 - 31611509
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||||||||||||||| ||| ||||||||| ||     ||| ||| | ||||| ||||||||||||||||||    
T  31611587 aagtgtaacattccgtttaaggtgtttcactctgattaatttatgaaatttttatgttgggaaaacggggtgttacact 31611509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 12711747 - 12711691
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaag 78  Q
    |||||||||||||||| || ||||||  ||| |||||||||| |||||| |||||||    
T  12711747 aataaatagtaattttactctatttatcttttaaagaagtgtgacattctgtttaag 12711691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 49999404 - 49999364
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgattt 95  Q
    ||||||||| |||| ||||||||||| ||||||||||||||    
T  49999404 aagaagtgtgacataccgtttaaggtgttttactctgattt 49999364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 6554689 - 6554557
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  6554689 tgatattatgaaatgattgaaataaatagtaatttttctatatttacgtttgaaagaagtatagcattccgtttaaggtgttttactctgatttatgcta 6554590  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| ||||||||||||||||    
T  6554589 aaaaatttcaagttgggaaaacggggtgttaca 6554557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 22468933 - 22468800
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  22468933 tgatattatgaaatgattgaaataaatagtaattttgctatatttatgtttgaaagaagtgtaacattccgtttaagatgttttactctgatttatgcta 22468834  T
Q  102 a-aaaatttcaagttggaaaaacggggtgttaca 134  Q
    | |||| |||||||||||||||||||||||||||    
T  22468833 aaaaaaattcaagttggaaaaacggggtgttaca 22468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 6555290 - 6555158
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  6555290 tgatattatgaaatgattgaaataaatagtagtttttctatatttacgtttgaaagaagtatagcattccgtttaaggtgttttactctgatttatgcta 6555191  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| ||||||||||||||||    
T  6555190 aaaaatttcaagttgggaaaacggggtgttaca 6555158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 22359123 - 22359256
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgct- 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||     
T  22359123 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgttcgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 22359222  T
Q  101 aaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||| |||||||||| ||||||||||||||||    
T  22359223 aaaaaaattcaagttgggaaaacggggtgttaca 22359256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 23540597 - 23540494
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23540597 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtaacattccgtttaaggtgttttactctgatttatgcta 23540499  T
Q  102 aaaaa 106  Q
    |||||    
T  23540498 aaaaa 23540494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 23537447 - 23537344
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23537447 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 23537349  T
Q  102 aaaaa 106  Q
    |||||    
T  23537348 aaaaa 23537344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 10815614 - 10815511
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  10815614 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 10815516  T
Q  102 aaaaa 106  Q
     ||||    
T  10815515 taaaa 10815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 330 - 405
Target Start/End: Complemental strand, 9309086 - 9309011
Alignment:
Q  330 agggggtgtttgtttcatggatacaaaacatattcccaggaattcttggatgggaattaagattccagtgtttgtt 405  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9309086 aggggatgtttgtttcatggatacaaaacatattcctaggaattcttggatgggaattaagattccagtgtttgtt 9309011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 136
Target Start/End: Complemental strand, 26760594 - 26760473
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||||| |||| || | |||||||||||||||| | |||||| |||||    
T  26760594 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcattctgttt-agttgttttactctgatttatac-aaaaaaattcaa 26760497  T
Q  113 gttggaaaaacggggtgttacact 136  Q
    ||||| ||||||||||||||||||    
T  26760496 gttgggaaaacggggtgttacact 26760473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 25251504 - 25251627
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaa-at 107  Q
    ||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| ||||| ||    
T  25251504 atgagatgattgaaataaatagtaattttactatgtttatatttgaaagaagtgtagcatccggtttta-gttgtttactctgatttatgcaaaaaatat 25251602  T
Q  108 ttcaagttggaaaaacggggtgtta 132  Q
    |||||||||| ||||||||||||||    
T  25251603 ttcaagttgggaaaacggggtgtta 25251627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 25315289 - 25315412
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaa-at 107  Q
    ||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| ||||| ||    
T  25315289 atgagatgattgaaataaatagtaattttactatgtttatatttgaaagaagtgtagcatccggtttta-gttgtttactctgatttatgcaaaaaatat 25315387  T
Q  108 ttcaagttggaaaaacggggtgtta 132  Q
    |||||||||| ||||||||||||||    
T  25315388 ttcaagttgggaaaacggggtgtta 25315412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 16226248 - 16226124
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    |||| |||||||||||||||||||||||| |||||||||  ||| ||||||||||| ||| | |||||  ||  |||||||||| ||||||| ||||| |    
T  16226248 atgatatgattgaaataaatagtaattttactatatttatatttaaaagaagtgtagcatcctgttta--gttgtttactctgattttatgc-aaaaatt 16226152  T
Q  108 ttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||| |||||||||||||||||    
T  16226151 ttcaagttgggaaaacggggtgttacac 16226124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 20564674 - 20564550
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||| ||||||||||||||| ||| |||||||||  ||| ||||||||||| ||| | |||| || | ||||||||||| ||||||| |||||||    
T  20564674 atgagatgactgaaataaatagtaactttactatatttatattttaaagaagtgtagcatcctgttt-agttgttttactctgattttatgc-aaaaaat 20564577  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    ||||| |||| ||||||||||||||||    
T  20564576 ttcaacttgggaaaacggggtgttaca 20564550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 10952430 - 10952309
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacg-tttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttca 111  Q
    ||||||||||||| |||| |||||||||||||||| | ||||||||||||||| ||| |  |||| | | |||||||||||||||||  || || |||||    
T  10952430 gatgattgaaatatatagcaattttgctatatttatgatttgaaagaagtgtagcatcctattta-gttgttttactctgatttatgtaaagaattttca 10952332  T
Q  112 agttggaaaaacggggtgttaca 134  Q
    |||||| |||||||||| |||||    
T  10952331 agttgggaaaacggggtcttaca 10952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 11898909 - 11899028
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| |||| || |  ||||||||||||||| |||    |||| | | |||||||||||||||||| |||||||| |||    
T  11898909 gatgattgagataattagtaattttactatcttcagatttgaaagaagtgtagcatcatattta-gttgttttactctgatttatgcaaaaaaatt-caa 11899006  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||    
T  11899007 gttggaaaaacggggtgttaca 11899028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 26748386 - 26748273
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaatttcaagttgga 118  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| |||| | ||||||| |  || |||||||||  |||| ||||||||||||||||||     
T  26748386 aaataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttggg 26748289  T
Q  119 aaaacggggtgttaca 134  Q
    ||||||||||||||||    
T  26748288 aaaacggggtgttaca 26748273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 28372866 - 28372948
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| ||||||||||||||||||    
T  28372866 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacact 28372948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 22338306 - 22338266
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  22338306 aaagaagtgtaacattccgtttaaggtgttttactctgatt 22338266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 22748549 - 22748509
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  22748549 aaagaagtgtaacattccgtttaaggtgttttactctgatt 22748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 23114188 - 23114228
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  23114188 aaagaagtgtaacattccgtttaaggtgttttactctgatt 23114228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 37806218 - 37806258
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37806218 aaagaagtgtaacattccgtttaaggtgttttactctgatt 37806258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 20470734 - 20470856
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgattt-atgctaaaaaat 107  Q
    |||||||| ||||||||||  |||||||| || |||||| |||| |||| ||||| |||| | |||| || | ||| |||||||||| |||| |||||||    
T  20470734 atgagatgtttgaaataaa--gtaattttactctatttatgttttaaagtagtgtgacatcctgttttagttgttt-actctgattttatgc-aaaaaat 20470829  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||  ||||||||||||||||    
T  20470830 ttcaagttgagaaaacggggtgttaca 20470856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 26833408 - 26833329
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||  ||||||||||||||| |||||||||||||| |   | ||| ||||||||||| |||||| |||||||||    
T  26833408 aagaagtgtcgcattccgtttaaggtgttttactctgatttttatgagaaattttcaagttggcaaaacgaggtgttaca 26833329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 26645892 - 26645766
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaa 106  Q
    |||||||| ||  |||||||||||||| | || ||||||  ||| |||||||||| |||| | ||||||| |    ||||||||||  |||| |||||||    
T  26645892 atgagatgttttgaataaatagtaattctactctatttatcttttaaagaagtgtgacatcctgtttaag-tcgaatactctgattattatg-taaaaaa 26645795  T
Q  107 tttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||| |||||||||||||||||    
T  26645794 tttcaagttgggaaaacggggtgttacac 26645766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 22334776 - 22334736
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  22334776 aaagaagtgtaacattccgtttaaggggttttactctgatt 22334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 36448199 - 36448159
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  36448199 aaagaagtgtaatattccgtttaaggtgttttactctgatt 36448159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 29913650 - 29913616
Alignment:
Q  101 aaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||| |||||||||    
T  29913650 aaaaaatttcaagttggaaaaacggagtgttacac 29913616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 8645 - 8512
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  8645 tgatattatgaaatgattgtaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattctgtttaaggtgttttactctgatttatgcta 8546  T
Q  102 aaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||| ||| |||||||||||||||||    
T  8545 aaaaatttcaagctgggaaaacggggtgttacac 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 19878529 - 19878396
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19878529 tgatattatgaaatgattgaaataaatagtaattttactatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 19878430  T
Q  102 aaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||| |||||||||| ||||| |||||||||||    
T  19878429 aaaaaattcaagttgggaaaacagggtgttacac 19878396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 24977387 - 24977253
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgct- 100  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||     
T  24977387 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgcta 24977289  T
Q  101 --aaaaaatttcaagttggaaaaacggggtgttaca 134  Q
      ||||||  ||||||||| ||| ||||||||||||    
T  24977288 taaaaaaaaatcaagttgggaaatcggggtgttaca 24977253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 21398370 - 21398250
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| |  |||| | | |||||||||||||||||| |||||| |||||    
T  21398370 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctattta-gttgttttactctgatttatgcaaaaaaaattcaa 21398272  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||    
T  21398271 gttggaaaaacggggtgttaca 21398250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 21792863 - 21792743
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| |  |||| | | |||||||||||||||||| |||||| |||||    
T  21792863 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctattta-gttgttttactctgatttatgcaaaaaaaattcaa 21792765  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||    
T  21792764 gttggaaaaacggggtgttaca 21792743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 19664224 - 19664098
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||| ||||||||||||||||||| ||||||| |  |||| |||||||||| ||| | |||| || | |||||| ||||||||||| |||||| |    
T  19664224 atgagatgaatgaaataaatagtaattttactatattcatatttgtaagaagtgtagcatcctgttttagttgttttacactgatttatgc-aaaaaaat 19664126  T
Q  109 tcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||||||||||||||||||||    
T  19664125 tcaagttggaaaaacggggtgttacact 19664098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 20453456 - 20453330
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||||||||||||| |||| || ||||||  |||||| |||||||| ||| | ||||   ||  ||||||||||||||||| ||||||||    
T  20453456 atgagatgattgaaataaatagtatttttactttatttatatttgaaggaagtgtagcatcctgtttttagttgtttactctgatttatgc-aaaaaatt 20453358  T
Q  109 tcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||||||||||||||||||||    
T  20453357 tcaagttggaaaaacggggtgttacact 20453330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 23946719 - 23946597
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| | ||  |||||||||||||||||  |||| ||    
T  23946719 atgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgc--aaaattt 23946623  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  23946622 tcaagttgggaaaacggggtgttaca 23946597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 17217027 - 17216904
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||| |||||| | ||||| |||  | ||  ||||||||||||||||| ||||||||    
T  17217027 atgagatgattgaaataaatagtaattttactatatttatatttgaaggaagtgcagcattctgttgta-gttgtttactctgatttatgc-aaaaaatt 17216930  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| |||||||    
T  17216929 tcaagttggaaaaacgggctgttaca 17216904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 20180404 - 20180523
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||| | |||| || | |||||||||||||||||| |||||| |||||    
T  20180404 gatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 20180501  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    |||| |||||||||||||||||    
T  20180502 gttgaaaaaacggggtgttaca 20180523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 22333720 - 22333596
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||| |||||| |||||| ||| | |||||||  ||||||||||||||| ||| | |||| || | |||||||||||||||||| |||||| |    
T  22333720 atgagatgattcaaataattagtaactttaccatatttatatttgaaagaagtgtagcatcctgttttagttgttttactctgatttatgc-aaaaaaat 22333622  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||| ||||||||||    
T  22333621 tcaagttgggaaaacagggtgttaca 22333596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 25850112 - 25850232
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| |||||||||   ||| |||||||||| ||| | ||||| | | |||||||||||||||||| ||||||  ||||    
T  25850112 gatgattgaaataaatagtaattttactatatttataattgtaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaaatcaa 25850210  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||| |||||||||||    
T  25850211 gttgggaaaatggggtgttaca 25850232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 39937919 - 39938038
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||| ||||||||| ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  39937919 gatgattgagataattagtaattttactatattcagatttgagagaagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 39938016  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||| ||||||||    
T  39938017 gttgggaaaacggagtgttaca 39938038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 22242606 - 22242479
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgt----ttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaa 104  Q
    ||||||||||||||||||||||||||||| |||||| ||  |    |||||||||||||| ||| | |||| || | ||| |||||||||||||| ||||    
T  22242606 atgagatgattgaaataaatagtaattttactatatatatatatatttgaaagaagtgtagcatcctgttttagttgttt-actctgatttatgc-aaaa 22242509  T
Q  105 aatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||  ||||||||||||||||    
T  22242508 aatttcaagttgcgaaaacggggtgttaca 22242479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 17908539 - 17908662
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    ||||||||||||||||||||||||||||| ||||| |||  ||| ||||||||||  ||| | |||||  ||  |||||||||| ||||||| ||||||     
T  17908539 atgagatgattgaaataaatagtaatttttctataattatattttaaagaagtgtggcatcctgttta--gttgtttactctgattttatgc-aaaaaaa 17908635  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| ||||||||||||||||    
T  17908636 ttcaagttgggaaaacggggtgttaca 17908662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 23417785 - 23417664
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| |||||||||| ||| ||||||| |  ||||||||||||||| |||   |||||  ||  ||||||||||||||||| ||||| ||    
T  23417785 atgagttgattgaa-taaatagtaactttactatattaatatttgaaagaagtgtagcatcttgttta--gttgtttactctgatttatgc-aaaaactt 23417690  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||||||    
T  23417689 tcaagttggaaaaacggggtgttaca 23417664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 12576140 - 12576060
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||| |||||||||||||||| |||||||||||||| |   | ||| ||||||||||| |||||||||||||||||    
T  12576140 aagaagtgtgacattccgtttaaggtgttttactctgatttttatgagaaattttcaagttgggaaaacggggtgttacac 12576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 42267772 - 42267880
Alignment:
Q  24 taaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaatttcaagttggaaaaa 122  Q
    ||||||||| |||| |||||||||  ||| ||||||||||||||| |  ||||  ||  |||||||||| ||||||| ||||||||||||||||||||||    
T  42267772 taaatagtatttttactatatttatattttaaagaagtgtaacatccgattta--gttgtttactctgattttatgc-aaaaaatttcaagttggaaaaa 42267868  T
Q  123 cggggtgttaca 134  Q
    ||||||||||||    
T  42267869 cggggtgttaca 42267880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 39696454 - 39696579
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||||||||||||| |||| |||||||||  |||||| |||||||| ||| |  |||   ||  || |||||||||||||| ||||||||    
T  39696454 atgagatgattgaaataaatagtatttttactatatttatatttgaaggaagtgtagcatcctttttttagttgttcactctgatttatgc-aaaaaatt 39696552  T
Q  109 tcaagttggaaaaacggggtgttacact 136  Q
    ||||||||  ||||| ||||||||||||    
T  39696553 tcaagttgagaaaac-gggtgttacact 39696579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 8586 - 8463
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||| ||| |||||||||  ||||| ||||||||| ||| | |||  | ||  ||||||||||||||||| ||||||      
T  8586 atgagatgattgaaataaatagtaactttactatatttaaatttgatagaagtgtagcatcctgttcta-gttgtttactctgatttatgc-aaaaaaaa 8489  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||| |||| ||||||| ||||||||    
T  8488 tcaaattgggaaaacggagtgttaca 8463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 45118890 - 45119009
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| |||   |||| || | |||||||||||||||||| |||||| || ||    
T  45118890 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcatgttt-agttgttttactctgatttatgcaaaaaaaatt-aa 45118987  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  45118988 gttgggaaaacagggtgttaca 45119009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 25066559 - 25066519
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  25066559 aaagaagtgtaacattccgtttaaggtgttttactctgatt 25066519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 27943406 - 27943446
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  27943406 aaagaagtgtaacattccgtttaaggtgttttactctgatt 27943446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 17980448 - 17980483
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  17980448 taaaaaatttcaagttggaaaaacggggtgttacac 17980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 18821059 - 18821094
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  18821059 taaaaaatttcaagttggaaaaacggggtgttacac 18821094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 22585344 - 22585399
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    ||||||||||||||||||||||||||| | |||| ||||  |||||||||||||||    
T  22585344 atgagatgattgaaataaatagtaattatactatgtttatatttgaaagaagtgta 22585399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 18759457 - 18759368
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgc 99  Q
    |||||||||||||||| |||||||| ||| ||||||||   ||||||||||||||| ||| | |||| | ||  |||||||||||||||||    
T  18759457 atgagatgattgaaatgaatagtaactttactatatttgtatttgaaagaagtgtagcatccagtttta-gttgtttactctgatttatgc 18759368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 6103548 - 6103596
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaag 57  Q
    ||||||| ||||||||||||||||||||| |||||||||  ||||||||    
T  6103548 atgagataattgaaataaatagtaattttactatatttatatttgaaag 6103596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 25648248 - 25648284
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  25648248 aagtgtaacattccgtttaaggtgttttactctgatt 25648284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 31724897 - 31724950
Alignment:
Q  83 tttactctgat--ttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||  |||||| ||||||||||||||||| |||||||||||||||||    
T  31724897 tttactctgatgtttatgc-aaaaaatttcaagttgggaaaacggggtgttacac 31724950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 42561422 - 42561461
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgat 93  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  42561422 aaagaagtgtaatattccgtttaaggtgttttactctgat 42561461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 45472123 - 45472173
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  45472123 ttactctgattttatgc-aaaaaatttcaagttggaaaaacggggtattaca 45472173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 17622334 - 17622370
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||||| || |||||||||||||    
T  17622334 aagtgtaacattccgtttaacgtgttttactctgatt 17622370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 29849585 - 29849717
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |||||||| ||||||||||||||||||||    
T  29849585 tgatattatgaaatgattgaaataaatagtaattttgctatatttacgttttaaagaattgtagcattccttttaaggtgttttactctgatttatgcta 29849684  T
Q  102 aaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| |||||||| |||||||    
T  29849685 aaaaatttcaagttgggaaaacgggatgttaca 29849717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 13763079 - 13762959
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||    
T  13763079 tgatattatgaaatgattgaaataaatagtaattttactatatttacgtttgaaagaagtgtaccatttcgtttaaggtgttttactctaatttatgcta 13762980  T
Q  102 aaaaatttcaagttggaaaaa 122  Q
    |||||||||||||||| ||||    
T  13762979 aaaaatttcaagttgggaaaa 13762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 29417985 - 29418117
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgct- 100  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||     
T  29417985 tgatattatgaaatgattgaaataa-tagtaattttgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactcttatttatgcta 29418083  T
Q  101 aaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||   ||||||||||||||||    
T  29418084 aaaaaatttcaagttaagaaaacggggtgttaca 29418117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 24551351 - 24551472
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||| ||||||||||||||||||||| | ||  |||||||||||||| | |||| || | |||||||||||||||||| |||||| |||||    
T  24551351 gatgattgaaatatatagtaattttgctatatttatgattataagaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 24551448  T
Q  113 gttggaaaaacggggtgttacact 136  Q
     |||||||||||||||||||||||    
T  24551449 attggaaaaacggggtgttacact 24551472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 20412649 - 20412769
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||||| ||||||||||||    
T  20412649 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaatttcaa 20412746  T
Q  113 gttggaaaaacggggtgttacac 135  Q
     |||| |||||||||||||||||    
T  20412747 attgggaaaacggggtgttacac 20412769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 5112345 - 5112436
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  5112345 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtaacattccgtttaaggcgttttactctgatt 5112436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 23017992 - 23018111
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  |||||||||||| || |||   ||||| | | |||||||||||||||||| ||||||||||||    
T  23017992 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtttagcatcttgttta-gttgttttactctgatttatgc-aaaaaatttcaa 23018089  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  23018090 gttgggaaaacagggtgttaca 23018111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 31732638 - 31732519
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||||||| | |||| |  | |||||||||||||||||| ||||||||||||    
T  31732638 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtaacatcctgttt-acttgttttactctgatttatgc-aaaaaatttcaa 31732541  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||| |||||||||||    
T  31732540 gttgggaaaatggggtgttaca 31732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 27127362 - 27127481
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||| ||||||| ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  27127362 gatgattgagataattagtaattttactatattcagatttgaaataagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 27127459  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||||||| |||||||    
T  27127460 gttgggaaaacgggatgttaca 27127481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 1642088 - 1641968
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||  ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| ||||||  | ||    
T  1642088 gatgattgagataattagtaatttcactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaaattaa 1641990  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  1641989 gttgggaaaacggggtgttaca 1641968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 17757630 - 17757753
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||| ||||||||||||||||| |||||||||  | ||||||||||||| |||   |||| | ||  ||||||||||||||||| ||||||      
T  17757630 atgagatgatttaaataaatagtaattttactatatttatatctgaaagaagtgtagcatcttgtttta-gttgtttactctgatttatgc-aaaaaaaa 17757727  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||| ||||||||||    
T  17757728 tcaagttgggaaaacagggtgttaca 17757753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 35137643 - 35137566
Alignment:
Q  57 gaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||| |||||||||||||||||| |||||||||||||| | | | ||| ||| ||||||| ||||||||||||||||    
T  35137643 gaagtttaacattccgtttaaggtgttttactctgatttttacgagaaattttaaagttgggaaaacggggtgttaca 35137566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 10989028 - 10989108
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||||||| | ||||| ||||||||||||||||    
T  10989028 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaaattttatgttgggaaaacggggtgttaca 10989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 15815909 - 15815989
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||||||||||||||||||||    
T  15815909 aaagaagtgtaacattccgtttaaggtgttttactctgattgatttatgaaatttttatgttggaaaaacggggtgttaca 15815989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 21321145 - 21321065
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||    |||| ||| | ||||| ||||||||||||||||    
T  21321145 aaagaagtgtaacattccgtttaaggtgttttactctgattgatttataaaatttttatgttgggaaaacggggtgttaca 21321065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 23498812 - 23498937
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgc-taaaaaa 106  Q
    |||||||| |||||||||||||||||||| |||||||| | ||| ||||||||||||||| | |||||  ||  |||||||||| |||||||  ||||||    
T  23498812 atgagatgtttgaaataaatagtaattttactatatttgcattttaaagaagtgtaacatcctgttta--gttgtttactctgattttatgcaaaaaaaa 23498909  T
Q  107 tttcaagttggaaaaacggggtgttaca 134  Q
      | |||||||  |||||||||||||||    
T  23498910 aattaagttgggtaaacggggtgttaca 23498937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 31736483 - 31736605
Alignment:
Q  11 gagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaattt 109  Q
    ||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||| | |||| | ||  |||||||||| ||||| || |||| |||    
T  31736483 gagatgattgaaataaatagtaattttactataattacattttaaagaagtgtagcatcctgtttta-gttgtttactctgattttatact-aaaatttt 31736580  T
Q  110 caagttggaaaaacggggtgttaca 134  Q
    |||||||  ||||||| ||||||||    
T  31736581 caagttgcgaaaacggtgtgttaca 31736605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 27222120 - 27222039
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  27222120 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacac 27222039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 4475089 - 4475049
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  4475089 aaagaagtgtaacattccgtttaaggtgttttactctgatt 4475049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 21681226 - 21681339
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaatttcaagttgga 118  Q
    ||||||||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| |  || |||||||||  |||| |||||||||||||||||||    
T  21681226 aaataaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattaatatg-taaaaaatttcaagttgga 21681323  T
Q  119 aaaacggggtgttaca 134  Q
    ||||||||||||||||    
T  21681324 aaaacggggtgttaca 21681339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 18857086 - 18857162
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa-gttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||||||||| ||||||||||||| ||  ||  |||||| || ||||| ||||||||||||||||    
T  18857086 aagtgtaacattccgtttaaggtgttttactctgattaat-ttatgaaattttaatgttgggaaaacggggtgttaca 18857162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 1253690 - 1253654
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactct 90  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1253690 aaagaagtgtaacattccgtttaaggtgttttactct 1253654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 25737430 - 25737390
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  25737430 aaagaagtgtaacatttcgtttaaggtgttttactctgatt 25737390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 34298314 - 34298354
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  34298314 aaagaagtgtaatattccgtttaaggtgttttactctgatt 34298354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 4644706 - 4644745
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  4644706 aagaagtgtagcattccgtttaaggtgttttactctgatt 4644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 18325739 - 18325705
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||||||||||| ||||||||    
T  18325739 taaaaaatttcaagttggaaaaacggagtgttaca 18325705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 22213175 - 22213212
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatattt 46  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  22213175 atgagatgattgaaacaaatagtaattttactatattt 22213212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 25607363 - 25607416
Alignment:
Q  82 ttttactctgatt-tatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||| |||| |  ||||||||||||||| ||||||||||||||||    
T  25607363 ttttactctgattatatgtttgaaaatttcaagttgggaaaacggggtgttaca 25607416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 404 - 364
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||| |||||||||||||| ||||| |||||||    
T  404 aaagaagtgtaatattccgtttaaggtgttttattctgatt 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 18692781 - 18692833
Alignment:
Q  83 tttactctgatttatgctaaaaaatttcaa-gttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| ||| ||||||  | ||||||||||||||||||||||    
T  18692781 tttactctgatttatgttaagaaatttttatgttggaaaaacggggtgttaca 18692833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 18906323 - 18906271
Alignment:
Q  83 tttactctgatttatgctaaaaaatttcaa-gttggaaaaacggggtgttaca 134  Q
    |||||||||||||||| ||| ||||||  | ||||||||||||||||||||||    
T  18906323 tttactctgatttatgttaagaaatttttatgttggaaaaacggggtgttaca 18906271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 24644456 - 24644496
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||| ||||| || |||||||||||||    
T  24644456 aaagaagtgtaacattccttttaatgtgttttactctgatt 24644496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 31236874 - 31236846
Alignment:
Q  235 aagagagtgatgtgatatatgtgataagt 263  Q
    |||||||||||||||||||||||||||||    
T  31236874 aagagagtgatgtgatatatgtgataagt 31236846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 32261930 - 32261981
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||| |||| |||||||| ||||||| ||||||||||||||||||    
T  32261930 ttactctgattttatgcaaaaaaatt-caagttgaaaaaacggggtgttacac 32261981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 6804 - 6671
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |  |     
T  6804 tgatattatgaaatgattgaaataattagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgattt-ttatg 6706  T
Q  102 aaaaatttcaagttggaaaaacggggtgttacact 136  Q
    | || ||||||||||| ||||||||||||||||||    
T  6705 agaattttcaagttgggaaaacggggtgttacact 6671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 9842 - 9761
Alignment:
Q  53 gaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |   | ||| ||||||||||| ||||||||||||||||    
T  9842 gaaagaagtgtagcattccgtttaaggtgttttactctgatttttatgagaaattttcaagttgggaaaacggggtgttaca 9761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 391174 - 391084
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga 92  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  391174 tgatattatgaaatgattgaaataaatagtaattttggtatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctga 391084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 31167 - 31051
Alignment:
Q  16 gattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagtt 115  Q
    ||||| |||||||||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | | |||||||||||||||||| |||||||| ||||||    
T  31167 gattgcaataaatagtaattttactatattcatatttgaaagaattgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caagtt 31070  T
Q  116 ggaaaaacggggtgttaca 134  Q
    || ||||||||||||||||    
T  31069 gggaaaacggggtgttaca 31051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 36474 - 36358
Alignment:
Q  16 gattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagtt 115  Q
    ||||| |||||||||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | | |||||||||||||||||| |||||||| ||||||    
T  36474 gattgcaataaatagtaattttactatattcatatttgaaagaattgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caagtt 36377  T
Q  116 ggaaaaacggggtgttaca 134  Q
    || ||||||||||||||||    
T  36376 gggaaaacggggtgttaca 36358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 154368 - 154404
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactct 90  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  154368 aaagaagtgtaacattctgtttaaggtgttttactct 154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 17456 - 17333
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| ||||||||    
T  17456 atgagttgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgc-aaaaaatt 17359  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||||| |||||    
T  17358 tcaagttggaaaaacggggtattaca 17333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 144989 - 144869
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | ||||||||||||||||||  |||||||||||    
T  144989 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcataaaaatttcaa 144891  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  144890 gttgggaaaacggggtgttaca 144869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 108894 - 108854
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  108894 aaagaagtgtaacattccgtttaaggtgttttactctgatt 108854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 94710 - 94587
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| ||||||||    
T  94710 atgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgc-aaaaaatt 94613  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||| |||| ||||||||||||||||    
T  94612 tcaatttgggaaaacggggtgttaca 94587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 47322 - 47219
Alignment:
Q  2 tgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgcta 101  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||| | ||||||||||||| |||||||||| |||||||||    
T  47322 tgatattatgaaatgattgaaataa-tagtaaaattgctatatttatgtttgaaagaagtgtagctttccgtttaaggtgttttactctgttttatgcta 47224  T
Q  102 aaaaa 106  Q
    |||||    
T  47223 aaaaa 47219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 7440 - 7316
Alignment:
Q  8 tatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaat 107  Q
    |||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| ||||||     
T  7440 tatgagatgattgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgc-aaaaaaa 7343  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||||||||||| |||||||||    
T  7342 ttcaagttggaaaaacgaggtgttaca 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 10650 - 10769
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||   |||| || | |||||||||||||||||| ||||||||||||    
T  10650 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcatgttt-agttgttttactctgatttatgc-aaaaaatttcaa 10747  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  10748 gttgggaaaacggggtgttaca 10769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 10259 - 10379
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||| ||| | ||||| | | |||||||||||||||||| |||||| |||||    
T  10259 gatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaattcaa 10357  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  10358 gttgggaaaacggggtgttaca 10379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 9879 - 9999
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| ||||||||||||    
T  9879 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 9976  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    ||||| |||||||||||||||||    
T  9977 gttgggaaaacggggtgttacac 9999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 57662 - 57581
Alignment:
Q  53 gaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  57662 gaaagaagtgtagcattccgtttaaggtgttttactctgatttattc-aaaaaatttcaagttgggaaaacggggtgttacac 57581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 59748 - 59625
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||| ||||||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||| || || |||||||||||||||| ||||||| |    
T  59748 atgagatgaatgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttttagtta-tttactctgatttatg-taaaaaaat 59651  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    |||||||| |||||| ||||||||||    
T  59650 tcaagttgaaaaaacagggtgttaca 59625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 4179 - 4298
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||   |||| || | |||||||||||||||||| |||||| |||||    
T  4179 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtatcatcttgttt-agttgttttactctgatttatgc-aaaaaaattcaa 4276  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    ||| | ||||| |||||||||||    
T  4277 gtttg-aaaacagggtgttacac 4298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 330386 - 330509
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||||| |||||||| ||| ||||||||   |||||||||||||||  || | |||| || |||||||||||||||||||| |||||| |    
T  330386 atgagatgattgaaatgaatagtaactttactatatttgtatttgaaagaagtgtagaatcctgttt-agttattttactctgatttatgc-aaaaaaat 330483  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  330484 tcaagttgggaaaacggggtgttaca 330509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 108642 - 108529
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgattt-atgctaaaaaatttcaagttggaaa 120  Q
    ||||||||||||||||  | ||||||  |||||||| ||||| |||| | |||| || | ||| | |||||||| |||| ||| | ||||||||||||||    
T  108642 aataaatagtaattttattctatttatatttgaaagtagtgtgacatcctgttttagttgttt-attctgattttatgc-aaagattttcaagttggaaa 108545  T
Q  121 aacggggtgttacact 136  Q
    ||||||||||||||||    
T  108544 aacggggtgttacact 108529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 73870 - 73813
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaag 78  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| |||||| |||||||    
T  73870 aaataaatagtaattttactctatttatcttttaaagaagtgtgacattctgtttaag 73813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 42139 - 42229
Alignment:
Q  5 tattatgagatgattgaaa-taaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||| | |||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  42139 tattatgaaacgattgaaaatgaatagtaattttactatatttacgtttgaaagaagtgtagcattccgtttaaggtcctttactctgatt 42229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 19474 - 19393
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  19474 aaagaagtgtaacattccttttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacac 19393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 1430 - 1311
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||| ||||||||||||||||| ||||||||| | ||| |||||||| | ||||| |||| || | |||||||||||| ||||| ||||||||||||    
T  1430 gatgatttaaataaatagtaattttactatatttatgattgtaagaagtgcagcattctgttt-agttgttttactctgatctatgc-aaaaaatttcaa 1333  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||| ||||||||||    
T  1332 gttgggaaaactgggtgttaca 1311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 79240 - 79355
Alignment:
Q  17 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttg 116  Q
    ||||||||||||||||||||| ||||||| |  ||||||||||||||| |||   |||| || | |||||||||||||||||| |||||| |||||||||    
T  79240 attgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcttgttt-agttgttttactctgatttatgc-aaaaaaattcaagttg 79337  T
Q  117 gaaaaacggggtgttaca 134  Q
    | ||||||||||||||||    
T  79338 ggaaaacggggtgttaca 79355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 12268 - 12388
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| |||   |||||   | |||||||||||||||||| ||||||||||||    
T  12268 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcatgtttatt-tgttttactctgatttatgc-aaaaaatttcaa 12365  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    |||||||||||||| ||||||||    
T  12366 gttggaaaaacgggatgttacac 12388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 13918 - 13883
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||||| |||||||||||||||||    
T  13918 taaaaaatttcaagttgggaaaacggggtgttacac 13883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 659 - 538
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| |||||||||| ||| |||||||||  ||||||||||||||| ||||| |||||  ||  ||||||||||||||||| |||||| |    
T  659 atgagttgattgaa-taaatagtaactttactatatttatatttgaaagaagtgtagcattctgttta--gttgtttactctgatttatgc-aaaaaaat 564  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||| ||||||||||    
T  563 tcaagttgggaaaacagggtgttaca 538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 18591 - 18672
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggt-attttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||     ||||||| | ||||| ||||||||||||||||    
T  18591 aaagaagtgtaacattccgtttaaggtggttttactctgattaatttatgaaaattttatgttgggaaaacggggtgttaca 18672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 69444 - 69545
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| || | |||||||||||||||| | |||||| |||||    
T  69444 gatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatacaaaaaaaattcaa 69542  T
Q  113 gtt 115  Q
    |||    
T  69543 gtt 69545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 141657 - 141536
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| |||||| |||||    
T  141657 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaattcaa 141559  T
Q  113 gttggaaaaacggggtgttacac 135  Q
    || |  |||||||||||||||||    
T  141558 gtagcgaaaacggggtgttacac 141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 8684 - 8565
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||| ||||| ||| | ||||| | | |||||||||||||||||| |||||||| |||    
T  8684 gatgattgagataattagtaattttactatattcagatttgaaagaggtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caa 8587  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  8586 gttgggaaaacggggtgttaca 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 14073 - 13954
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||| ||||| ||| | ||||| | | |||||||||||||||||| |||||||| |||    
T  14073 gatgattgagataattagtaattttactatattcagatttgaaagaggtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caa 13976  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  13975 gttgggaaaacggggtgttaca 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 11245 - 11364
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||| ||||||| ||| | |||| | ||  ||||||||||||||||| |||||| |||||    
T  11245 gatgattgaaataaatagtaactttactatatttatatttgaaaaaagtgtagcatcctgtttta-gttgtttactctgatttatgc-aaaaaaattcaa 11342  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| |||||||| |||||||    
T  11343 gttgggaaaacgggatgttaca 11364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 35765 - 35881
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |   |||||||||||||| ||| | ||||| | | |||||||||||||||||| |||||| |||||    
T  35765 gatgattgagataattagtaattttactatattcaaaattgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaattcaa 35863  T
Q  113 gttggaaaaacggggtgt 130  Q
    ||||| ||||||||||||    
T  35864 gttgggaaaacggggtgt 35881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 27720 - 27596
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||  || |||| |||||||||  |||||| |||||||| ||| |  |||   ||  ||||||||||||||||| ||||||||    
T  27720 atgagatgattgaaataaatcatatttttactatatttatatttgaaggaagtgtagcatcctatttttagttgtttactctgatttatgc-aaaaaatt 27622  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  27621 tcaagttgggaaaacggggtgttaca 27596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 48365 - 48420
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    ||||||||||||||||| ||||||||||| |||||||||  |||||||||| ||||    
T  48365 atgagatgattgaaatatatagtaattttactatatttatatttgaaagaattgta 48420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 5093 - 4971
Alignment:
Q  10 tgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaattt 109  Q
    |||||| ||||||||||||| ||||| | |||| |||   ||||||||||||||| ||| | |||| || | ||| |||||||||||||| |||||||||    
T  5093 tgagattattgaaataaataataattctactatgtttttatttgaaagaagtgtagcatcctgttttagttgttt-actctgatttatgc-aaaaaattt 4996  T
Q  110 caagttggaaaaacggggtgttaca 134  Q
    |||||||| ||||||||||||||||    
T  4995 caagttgggaaaacggggtgttaca 4971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 1776 - 1880
Alignment:
Q  28 tagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacgggg 127  Q
    |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | |||||||||||||||||| |||||||| |||||||| |||||||||    
T  1776 tagtaattttactatattcatatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caagttgggaaaacgggg 1873  T
Q  128 tgttaca 134  Q
    |||||||    
T  1874 tgttaca 1880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 2780 - 2657
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||| ||| |||||| |   ||||||||||||||| ||| |  ||| | ||  |||||| ||||||||| ||||||| |    
T  2780 atgagatgattgaaataaatagtaactttactatatgtgtatttgaaagaagtgtagcatcctatttta-gttgtttactttgatttatg-taaaaaaat 2683  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  2682 tcaagttgggaaaacggggtgttaca 2657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1580 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1580
Description:

Target: scaffold1580; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 191 - 270
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| ||| ||||||||||| |||||||||||||| |   ||||| ||||||||||| ||||||||||||||||    
T  191 aagaagtgtagcatcccgtttaaggtgttttactctgatttttatgaaaaattttcaagttgggaaaacggggtgttaca 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 22438 - 22359
Alignment:
Q  55 aagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||||||||||||||| |||||||||||||| |   | ||| ||||||||||| ||||||||||||||||    
T  22438 aagaagtgtgacattccgtttaaggtgttttactctgatttttatgagaaattttcaagttgggaaaacggggtgttaca 22359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 105200 - 105320
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || | |||||||||||||||| | |||| |  | ||    
T  105200 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatccaaaaataaattaa 105298  T
Q  113 gttggaaaaacggggtgttaca 134  Q
    ||||| ||||||||||||||||    
T  105299 gttgggaaaacggggtgttaca 105320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 171394 - 171517
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    |||||||||||||||| |||||||| ||| ||||||||   |||||| |||||||| ||| | |||| || | |||||||||||||||||| ||||||      
T  171394 atgagatgattgaaatgaatagtaactttactatatttgtatttgaacgaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaaa 171491  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||| | ||||||||    
T  171492 tcaagttgggaaaacagtgtgttaca 171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 1076 - 1178
Alignment:
Q  13 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaa 112  Q
    ||||||||||||||||||||||||| |||||||    |||| |||||||||| ||| | |||| || | |||||||||||||||||| ||||| ||||||    
T  1076 gatgattgaaataaatagtaattttactatattcctatttgtaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaagtttcaa 1173  T
Q  113 gttgg 117  Q
    |||||    
T  1174 gttgg 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 8014 - 8065
Alignment:
Q  82 ttttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8014 ttttactctgatttatgc-aaaaaatttcaagttgggaaaacggggtgttaca 8065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 21804 - 21855
Alignment:
Q  82 ttttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  21804 ttttactctgatttatgcaaaaaaatt-caagttggaaaaacggggtgttaca 21855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 188773 - 188885
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaatttcaagttggaa 119  Q
    |||||||||||||||| || ||||||  ||| |||||||||| |||| | ||||||| |  || |||||||||  |||| |||||||||||||||||| |    
T  188773 aataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttggga 188870  T
Q  120 aaacggggtgttaca 134  Q
    |||||||||||||||    
T  188871 aaacggggtgttaca 188885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 6669 - 6548
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| ||| || ||| ||| |||||||||  ||||||||||||||| ||||| |||||  ||  |||||||| |||||||| ||||||      
T  6669 atgagttgattgaa-taattaataactttactatatttatatttgaaagaagtgtatcattctgttta--gttgtttactctaatttatgc-aaaaaaaa 6574  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| ||||||||||||||||    
T  6573 tcaagttgggaaaacggggtgttaca 6548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 27760 - 27678
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| ||||||||||||||||||    
T  27760 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacact 27678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 56286 - 56338
Alignment:
Q  83 tttactctgatttatgctaaaaaatttcaa-gttggaaaaacggggtgttaca 134  Q
    ||||||||||||| |||||| |||||| || ||||| ||||||||||||||||    
T  56286 tttactctgatttttgctaagaaattttaatgttgggaaaacggggtgttaca 56338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 138667 - 138749
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| ||||||||||||||||||    
T  138667 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacact 138749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 25033 - 24993
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  25033 aaagaagtgtaacaatccgtttaaggtgttttactctgatt 24993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 396932 - 396838
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaa 106  Q
    |||||||||||||| |||||||||| ||| |||||||||  ||||||||||||||| ||| | |||||  ||  ||||||||||||||||| ||||||    
T  396932 atgagatgattgaa-taaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttta--gttgtttactctgatttatgcaaaaaaa 396838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 128284 - 128335
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  128284 ttactctgattttatgcaaaaaaatatcaagttggataaacggggtgttaca 128335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 11611 - 11692
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  11611 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacac 11692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 16876 - 16753
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||||||||||||||||||||||| ||| |||||  |   || |||||||||||| ||| | |||| | ||  |||||||| |||||||| |||||| |    
T  16876 atgagatgattgaaataaatagtaactttactataaatgtattcgaaagaagtgtagcatcctgtttta-gttgtttactctaatttatgc-aaaaaaat 16779  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||||| |||||||||    
T  16778 tcaagttgggaaaacgaggtgttaca 16753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 2215 - 2175
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  2215 aaagaagtgtaacattccgtttaaggtgttttactctgatt 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 66180 - 66220
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  66180 aaagaagtgtaacattccgtttaaggtgttttactctgatt 66220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 114313 - 114363
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  114313 ttactctgattttatgc-aaaaaatttcaagttgggaaaacggggtgttaca 114363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 128030 - 128125
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaa 105  Q
    |||| |||||||||||||||||||| ||| || ||||||  ||||||||||||||| ||| | |||| | ||  ||||||||||||||||| |||||    
T  128030 atgaaatgattgaaataaatagtaactttactgtatttatatttgaaagaagtgtagcatcctgtttta-gttgtttactctgatttatgcaaaaaa 128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 1221 - 1333
Alignment:
Q  22 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgat--ttatgctaaaaaatttcaagttggaa 119  Q
    |||||||| ||||||| |||||||||  ||| |||| ||||| |||| | |||| || | ||| ||||||||  |||||| ||||||||||||||||| |    
T  1221 aataaataataattttactatatttatcttttaaagtagtgtgacatcctgttttagttgttt-actctgatgtttatgc-aaaaaatttcaagttggga 1318  T
Q  120 aaacggggtgttaca 134  Q
    |||||||||||||||    
T  1319 aaacggggtgttaca 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 3571 - 3694
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctga-tttatgctaaaaaat 107  Q
    |||||||| ||||||||||||||||||   |||||||||  ||| ||||| ||||| ||||| |||||  ||  |||||||||| ||||||| |||||||    
T  3571 atgagatgtttgaaataaatagtaattcaactatatttatattttaaagatgtgtagcattctgttta--gttatttactctgattttatgcaaaaaaat 3668  T
Q  108 ttcaagttggaaaaacggggtgttaca 134  Q
    || |||||| ||||||| | |||||||    
T  3669 tt-aagttgaaaaaacgagatgttaca 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 72460 - 72407
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttacacta 137  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  72460 ttactctgattttatg-taaaaaatttcaagttgggaaaacggggtgttacacta 72407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 60955 - 60842
Alignment:
Q  21 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaatttcaagttgga 118  Q
    ||||||||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| |  || |||||||||  |||| ||||||||||||| |||||    
T  60955 aaataaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaatttgga 60858  T
Q  119 aaaacggggtgttaca 134  Q
    ||||||||||||||||    
T  60857 aaaacggggtgttaca 60842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 168574 - 168528
Alignment:
Q  18 ttgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 64  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||    
T  168574 ttgaaataaatattaattttactatatttacatttgaaagaagtgta 168528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1212 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 626 - 678
Alignment:
Q  84 ttactctgattt-atgctaaaaaatttcaagttggaaaaacggggtgttacact 136  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  626 ttactctgattttatg-taaaaaatttcaagttgggaaaacggggtgttacact 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 4599 - 4562
Alignment:
Q  57 gaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4599 gaagtgtaacattccgtttaaggtgttttactctgatt 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 3578 - 3659
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||||||||||| || ||||||||||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  3578 aaagaagtgtaacattccgtttaaagtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacac 3659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 18849 - 18889
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  18849 aaagaagtgtaacatttcgtttaaggtgttttactctgatt 18889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 4306 - 4188
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatt 108  Q
    ||||| |||||||| |||||||||| ||| |||||||||  ||||||||   |||| ||| | |||||  ||  ||||||||||||||||| |||||| |    
T  4306 atgagttgattgaa-taaatagtaactttactatatttatatttgaaag---tgtagcatcctgttta--gttgtttactctgatttatgc-aaaaaaat 4214  T
Q  109 tcaagttggaaaaacggggtgttaca 134  Q
    ||||||||| |||||| |||||||||    
T  4213 tcaagttgggaaaacgaggtgttaca 4188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 3658 - 3618
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  3658 aaagaagtgtaatattccgtttaaggtgttttactctgatt 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 857 - 821
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  857 aagtgtaacattccgtttaaggtgttttactctgatt 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 5177 - 5141
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  5177 aagtgtaacattccgtttaaggtgttttactctgatt 5141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 893 - 857
Alignment:
Q  58 aagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  893 aagtgtaacattccgtttaaggtgttttactctgatt 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 66559 - 66519
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  66559 aaagatgtgtaacattccgtttaaggtgttttactctgatt 66519  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 14833 - 14873
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  14833 aaagaagtgtaacattctgtttaaggtgttttactctgatt 14873  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 224929 - 224969
Alignment:
Q  54 aaagaagtgtaacattccgtttaaggtattttactctgatt 94  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  224929 aaagaggtgtaacattccgtttaaggtgttttactctgatt 224969  T

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Target: scaffold0645 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 1402 - 1454
Alignment:
Q  83 tttactctgat--ttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||  |||||| |||||||| |||||||||||||||||||||||||    
T  1402 tttactctgatgtttatgcaaaaaaatt-caagttggaaaaacggggtgttaca 1454  T

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Target: scaffold0594 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 1972 - 1938
Alignment:
Q  101 aaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  1972 aaaaaatttcatgttggaaaaacggggtgttacac 1938  T

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Target: scaffold0453 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 6620 - 6661
Alignment:
Q  92 atttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  6620 atttatgcaaaaaaatt-caagttggaaaaacggggtgttaca 6661  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 18616 - 18650
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||||||||||| ||||||||    
T  18616 taaaaaatttcaagttggaaaaacggagtgttaca 18650  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 67053 - 67087
Alignment:
Q  100 taaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||||||||| ||||||||||||||||    
T  67053 taaaaaatttcaagttgggaaaacggggtgttaca 67087  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 66341 - 66260
Alignment:
Q  53 gaaagaagtgtaacattccgtttaaggtattttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||| | ||||||||||||||| ||||||||| |||| |   | ||| ||||||| ||| | ||||||||||||||    
T  66341 gaaagaagtgcagcattccgtttaaggtgttttactctaatttttatgagaaattttcaagatgggataacggggtgttaca 66260  T

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Target: scaffold0859 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 3142 - 3017
Alignment:
Q  9 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtattttactctgatt--tatgctaaaaaa 106  Q
    |||||||| ||  |||||||||||||| | || ||||||  ||| |||| ||||| |||||  ||||||| |  || |||||||||  |||| |||||||    
T  3142 atgagatgttttgaataaatagtaattctactctatttatcttttaaagtagtgtgacattttgtttaagttgatt-actctgattattatg-taaaaaa 3045  T
Q  107 tttcaagttggaaaaacggggtgttaca 134  Q
    |||||||||||  |||||||||||||||    
T  3044 tttcaagttggggaaacggggtgttaca 3017  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 8758 - 8706
Alignment:
Q  83 tttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||| ||| |||||| |  |||| |||||||||||||||||    
T  8758 tttactctgatttatgttaagaaattttatattgggaaaacggggtgttacac 8706  T

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Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 19429 - 19377
Alignment:
Q  83 tttactctgatttatgctaaaaaatttcaagttggaaaaacggggtgttacac 135  Q
    |||||||||||||||| ||| |||||| |  |||| |||||||||||||||||    
T  19429 tttactctgatttatgttaagaaattttatattgggaaaacggggtgttacac 19377  T

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