View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8987_low_18 (Length: 338)

Name: NF8987_low_18
Description: NF8987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8987_low_18
NF8987_low_18
[»] scaffold0001 (4 HSPs)
scaffold0001 (5-247)||(391164-391406)
scaffold0001 (279-329)||(391418-391468)
scaffold0001 (17-159)||(31179-31320)
scaffold0001 (17-159)||(36486-36627)
[»] chr6 (16 HSPs)
chr6 (5-241)||(13763069-13763305)
chr6 (5-241)||(29417759-29417995)
chr6 (5-241)||(29849359-29849595)
chr6 (5-157)||(5112203-5112355)
chr6 (238-329)||(29415471-29415562)
chr6 (17-112)||(20412542-20412637)
chr6 (268-323)||(16132343-16132400)
chr6 (268-323)||(19442955-19443012)
chr6 (17-112)||(23017885-23017980)
chr6 (19-98)||(31736393-31736471)
chr6 (255-322)||(1640022-1640091)
chr6 (268-323)||(21119724-21119781)
chr6 (166-208)||(23621879-23621921)
chr6 (17-126)||(24551229-24551339)
chr6 (208-241)||(1583932-1583965)
chr6 (173-205)||(3852727-3852759)
[»] chr3 (28 HSPs)
chr3 (5-241)||(1990170-1990406)
chr3 (5-241)||(13027303-13027540)
chr3 (5-241)||(16326220-16326456)
chr3 (5-241)||(34853493-34853729)
chr3 (17-191)||(3265772-3265946)
chr3 (17-191)||(36526930-36527104)
chr3 (238-328)||(10833224-10833314)
chr3 (238-323)||(10952651-10952736)
chr3 (238-323)||(10953580-10953665)
chr3 (238-329)||(18893728-18893819)
chr3 (19-191)||(16727625-16727795)
chr3 (272-329)||(18898055-18898112)
chr3 (17-126)||(12507593-12507702)
chr3 (19-191)||(15024998-15025168)
chr3 (19-191)||(9643684-9643855)
chr3 (17-159)||(14440231-14440372)
chr3 (17-159)||(22308369-22308510)
chr3 (17-112)||(53647651-53647746)
chr3 (5-64)||(21081589-21081648)
chr3 (268-323)||(55291523-55291579)
chr3 (268-323)||(178399-178456)
chr3 (268-323)||(13025489-13025546)
chr3 (268-323)||(13029081-13029138)
chr3 (17-191)||(12513566-12513733)
chr3 (19-98)||(20416572-20416651)
chr3 (268-314)||(17547401-17547447)
chr3 (268-323)||(10551399-10551457)
chr3 (114-191)||(8492900-8492975)
[»] chr2 (24 HSPs)
chr2 (5-241)||(26895349-26895585)
chr2 (5-241)||(19803141-19803377)
chr2 (5-241)||(22702116-22702352)
chr2 (5-218)||(21244855-21245068)
chr2 (5-169)||(26900788-26900952)
chr2 (238-329)||(41300844-41300935)
chr2 (238-329)||(21072603-21072694)
chr2 (17-159)||(27039696-27039837)
chr2 (17-159)||(24782655-24782796)
chr2 (19-191)||(10898481-10898651)
chr2 (238-323)||(22841975-22842060)
chr2 (17-112)||(25084594-25084689)
chr2 (19-112)||(14692689-14692780)
chr2 (19-159)||(5984581-5984719)
chr2 (66-190)||(19357289-19357412)
chr2 (86-191)||(25044521-25044624)
chr2 (74-159)||(5033121-5033205)
chr2 (268-323)||(6477155-6477212)
chr2 (268-310)||(21245757-21245799)
chr2 (268-310)||(26904477-26904519)
chr2 (19-191)||(18389926-18390095)
chr2 (137-191)||(22671108-22671162)
chr2 (268-310)||(24272967-24273009)
chr2 (175-208)||(23084983-23085016)
[»] chr5 (23 HSPs)
chr5 (5-241)||(23537437-23537673)
chr5 (5-241)||(22468923-22469159)
chr5 (5-228)||(22358919-22359133)
chr5 (5-146)||(6555280-6555421)
chr5 (5-146)||(6554679-6554820)
chr5 (5-116)||(10815604-10815715)
chr5 (238-329)||(23539812-23539903)
chr5 (5-101)||(23540587-23540683)
chr5 (17-159)||(26760606-26760747)
chr5 (19-191)||(16226258-16226429)
chr5 (19-192)||(25251323-25251494)
chr5 (19-192)||(25315108-25315279)
chr5 (208-241)||(22358896-22358929)
chr5 (194-241)||(10815714-10815761)
chr5 (177-208)||(21906174-21906205)
chr5 (285-323)||(17813577-17813617)
chr5 (285-323)||(24276416-24276456)
chr5 (285-323)||(24385757-24385797)
chr5 (285-322)||(10817906-10817945)
chr5 (247-323)||(21663062-21663140)
chr5 (285-322)||(22776989-22777028)
chr5 (209-241)||(24278105-24278137)
chr5 (209-241)||(24384076-24384108)
[»] chr4 (22 HSPs)
chr4 (5-241)||(4832447-4832683)
chr4 (5-241)||(4829152-4829388)
chr4 (5-241)||(4835742-4835978)
chr4 (5-241)||(15988931-15989167)
chr4 (1-191)||(33184942-33185131)
chr4 (238-329)||(15747471-15747562)
chr4 (238-329)||(24046394-24046485)
chr4 (238-329)||(4830072-4830163)
chr4 (238-329)||(4833367-4833458)
chr4 (17-191)||(14184127-14184299)
chr4 (7-191)||(14187657-14187838)
chr4 (21-192)||(15607743-15607912)
chr4 (21-127)||(32467735-32467842)
chr4 (17-159)||(10358122-10358263)
chr4 (268-323)||(14912162-14912217)
chr4 (268-323)||(12729764-12729821)
chr4 (268-323)||(20898669-20898726)
chr4 (66-192)||(16027697-16027821)
chr4 (268-322)||(18230817-18230873)
chr4 (208-241)||(33685314-33685347)
chr4 (209-241)||(3336651-3336683)
chr4 (268-323)||(14049682-14049738)
[»] scaffold0066 (1 HSPs)
scaffold0066 (5-241)||(47312-47548)
[»] chr7 (37 HSPs)
chr7 (5-238)||(48742342-48742575)
chr7 (5-199)||(14189945-14190139)
chr7 (5-197)||(13254406-13254598)
chr7 (5-200)||(15212580-15212774)
chr7 (238-328)||(831549-831639)
chr7 (238-328)||(1196729-1196819)
chr7 (238-323)||(34958608-34958693)
chr7 (5-121)||(14192781-14192897)
chr7 (238-329)||(11662152-11662243)
chr7 (17-159)||(13151323-13151464)
chr7 (19-159)||(10660719-10660856)
chr7 (17-159)||(11065611-11065752)
chr7 (17-159)||(15121003-15121144)
chr7 (19-191)||(32997072-32997242)
chr7 (17-159)||(44373127-44373268)
chr7 (17-159)||(44381983-44382124)
chr7 (19-191)||(13700377-13700547)
chr7 (208-323)||(10628809-10628926)
chr7 (208-323)||(10638504-10638621)
chr7 (53-159)||(12370518-12370623)
chr7 (17-112)||(36686997-36687092)
chr7 (17-159)||(36706362-36706503)
chr7 (141-241)||(14192694-14192782)
chr7 (53-112)||(32435258-32435317)
chr7 (268-329)||(13256769-13256831)
chr7 (268-319)||(21518231-21518282)
chr7 (268-310)||(8249183-8249225)
chr7 (268-323)||(13898547-13898604)
chr7 (268-323)||(15214629-15214686)
chr7 (247-323)||(23556400-23556478)
chr7 (17-159)||(17131205-17131344)
chr7 (268-319)||(48744605-48744656)
chr7 (66-191)||(4070232-4070355)
chr7 (286-323)||(16107777-16107815)
chr7 (285-323)||(10634441-10634481)
chr7 (31-108)||(15280724-15280800)
chr7 (208-241)||(15732196-15732229)
[»] chr8 (23 HSPs)
chr8 (5-207)||(24977377-24977579)
chr8 (5-197)||(41682435-41682626)
chr8 (5-191)||(19878519-19878704)
chr8 (82-241)||(19881266-19881425)
chr8 (19-190)||(19664234-19664402)
chr8 (17-191)||(25849928-25850100)
chr8 (19-159)||(23417795-23417934)
chr8 (17-191)||(39696274-39696446)
chr8 (19-191)||(23946729-23946899)
chr8 (19-191)||(42267251-42267422)
chr8 (53-159)||(21398418-21398523)
chr8 (53-159)||(21792911-21793016)
chr8 (19-112)||(22585242-22585334)
chr8 (17-159)||(20180251-20180392)
chr8 (23-126)||(22243859-22243962)
chr8 (19-200)||(6103359-6103538)
chr8 (19-98)||(17217037-17217116)
chr8 (19-97)||(23888178-23888256)
chr8 (19-92)||(8596-8669)
chr8 (19-191)||(17908360-17908529)
chr8 (274-323)||(15635013-15635064)
chr8 (268-323)||(21860451-21860508)
chr8 (285-324)||(22815514-22815555)
[»] scaffold0577 (1 HSPs)
scaffold0577 (5-191)||(6794-6979)
[»] chr1 (19 HSPs)
chr1 (5-191)||(12359772-12359957)
chr1 (5-106)||(21652507-21652608)
chr1 (238-323)||(28313395-28313480)
chr1 (17-159)||(24725771-24725913)
chr1 (19-191)||(45753917-45754087)
chr1 (19-127)||(42696169-42696277)
chr1 (19-191)||(22348820-22348991)
chr1 (19-108)||(24724344-24724433)
chr1 (19-189)||(51475281-51475449)
chr1 (247-323)||(21660424-21660502)
chr1 (17-190)||(19762472-19762644)
chr1 (268-323)||(13527633-13527690)
chr1 (268-323)||(18271397-18271454)
chr1 (78-190)||(1641817-1641927)
chr1 (273-323)||(18276056-18276108)
chr1 (292-323)||(20805423-20805454)
chr1 (21-97)||(13301275-13301349)
chr1 (208-241)||(28205170-28205203)
chr1 (268-323)||(13227967-13228023)
[»] scaffold0117 (2 HSPs)
scaffold0117 (17-191)||(41961-42135)
scaffold0117 (285-323)||(21942-21982)
[»] scaffold0026 (1 HSPs)
scaffold0026 (17-134)||(145001-145118)
[»] scaffold0021 (2 HSPs)
scaffold0021 (240-329)||(147670-147759)
scaffold0021 (161-241)||(145314-145394)
[»] scaffold0335 (2 HSPs)
scaffold0335 (5-100)||(8635-8730)
scaffold0335 (186-241)||(8742-8797)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-191)||(94720-94892)
[»] scaffold0671 (1 HSPs)
scaffold0671 (19-127)||(4316-4424)
[»] scaffold0220 (1 HSPs)
scaffold0220 (19-159)||(16886-17024)
[»] scaffold0321 (1 HSPs)
scaffold0321 (17-191)||(1430-1602)
[»] scaffold0051 (1 HSPs)
scaffold0051 (17-112)||(69337-69432)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-159)||(79083-79224)
[»] scaffold0042 (3 HSPs)
scaffold0042 (19-126)||(48247-48355)
scaffold0042 (17-108)||(27728-27818)
scaffold0042 (268-323)||(52280-52337)
[»] scaffold0509 (1 HSPs)
scaffold0509 (17-159)||(10498-10638)
[»] scaffold0075 (1 HSPs)
scaffold0075 (17-191)||(3995-4167)
[»] scaffold0002 (1 HSPs)
scaffold0002 (19-159)||(396942-397082)
[»] scaffold1243 (1 HSPs)
scaffold1243 (53-159)||(923-1028)
[»] scaffold0375 (1 HSPs)
scaffold0375 (17-112)||(10152-10247)
[»] scaffold1600 (1 HSPs)
scaffold1600 (53-159)||(1479-1585)
[»] scaffold0083 (1 HSPs)
scaffold0083 (19-159)||(7449-7587)
[»] scaffold0413 (1 HSPs)
scaffold0413 (269-323)||(11735-11791)
[»] scaffold0071 (1 HSPs)
scaffold0071 (269-323)||(52077-52133)
[»] scaffold0207 (1 HSPs)
scaffold0207 (285-329)||(9749-9793)
[»] scaffold0462 (1 HSPs)
scaffold0462 (17-84)||(5102-5169)
[»] scaffold0328 (1 HSPs)
scaffold0328 (19-159)||(17466-17602)
[»] scaffold0124 (1 HSPs)
scaffold0124 (268-323)||(35357-35414)
[»] scaffold0004 (3 HSPs)
scaffold0004 (285-319)||(385251-385285)
scaffold0004 (19-108)||(330287-330376)
scaffold0004 (19-98)||(108665-108742)
[»] scaffold0589 (1 HSPs)
scaffold0589 (17-191)||(2788-2959)
[»] scaffold0064 (1 HSPs)
scaffold0064 (268-323)||(69065-69121)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-126)||(127913-128020)
[»] scaffold0607 (1 HSPs)
scaffold0607 (268-323)||(3870-3927)
[»] scaffold0090 (1 HSPs)
scaffold0090 (141-191)||(16856-16906)
[»] scaffold0381 (1 HSPs)
scaffold0381 (208-241)||(14529-14562)
[»] scaffold0331 (1 HSPs)
scaffold0331 (285-323)||(4801-4841)
[»] scaffold0962 (1 HSPs)
scaffold0962 (247-323)||(535-613)
[»] scaffold0334 (1 HSPs)
scaffold0334 (247-323)||(2172-2250)
[»] scaffold0181 (1 HSPs)
scaffold0181 (247-323)||(25440-25518)
[»] scaffold0016 (1 HSPs)
scaffold0016 (19-110)||(171293-171384)


Alignment Details
Target: scaffold0001 (Bit Score: 191; Significance: 1e-103; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 391164 - 391406
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  391164 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 391263  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| | ||| |||| |||| ||||||||||||||||||    
T  391264 tctaaacagtcttcaacataaaagtcataataaatctcgtaacatatggaaaacaataaagatccccatcccgttaagtattagagcacctaagactcat 391363  T
Q  205 gtgaacagcaactaacagctactactctgcatcaccttagttt 247  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  391364 gtgaacagcaactaacaactactgctctgcatcaccttagttt 391406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 391418 - 391468
Alignment:
Q  279 ccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  391418 ccccctttggctcttctcctagccttctcttgttttctcccaaaacctctg 391468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 31179 - 31320
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||| | ||||||||||||||||||||| | ||||||||  |||| |  |    
T  31179 aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaatggcctcaacttaaacaacttaattataatccagttgaaacaaaac 31278  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  31279 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 31320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 36486 - 36627
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||| | ||||||||||||||||||||| | ||||||||  |||| |  |    
T  36486 aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaatggcctcaacttaaacaacttaattataatccagttgaaacaaaac 36585  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  36586 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 36627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 13763069 - 13763305
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||| | ||||||||||  ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  13763069 tcataatatcaaaattaaatctcaatgcagtgaaaaatatcttggtaaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 13763168  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  13763169 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcctgttacgtatcagagcacctaagactcat 13763268  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13763269 gtgaacaacaactaacagctactactctgcatcacct 13763305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 29417995 - 29417759
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||| |||    
T  29417995 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcgacttaaacaacttaataaaaattcag 29417896  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||    
T  29417895 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagattctcatcccgttacgtatcagagcacctaagactcat 29417796  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||| | |||||||||||||||||    
T  29417795 gtgtaccgcaactaacaacaactactctgcatcacct 29417759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 29849595 - 29849359
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  29849595 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 29849496  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    | ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| || ||| |||| |||| |||||||||||||||| |    
T  29849495 tttaaacagtcttcaacataaaagtcataacaaatcacgtaacatatggaaaacaataaagatcttcatcccgttatgtattagagcacctaagactcgt 29849396  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    || ||| |||||||| |||||||||||||||||||||    
T  29849395 gtaaactgcaactaatagctactactctgcatcacct 29849359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 5112355 - 5112203
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||    
T  5112355 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaattcag 5112256  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaa 157  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  5112255 tctaaacagtcttcaacataaaagtcatagtaaatcacgtaacatatggaaaa 5112203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 29415562 - 29415471
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29415562 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 29415471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 20412637 - 20412542
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||||| |||||| ||||| | || | |  |||||||||||| ||||||| ||| ||||||||||||||||| |||||||||| ||||||    
T  20412637 aattaaatctcattgcagcagaaaacaactaagttcaacatcatgttggcacaacggccttaacttaaacaacttaattaaaatccagtttaaaca 20412542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 16132400 - 16132343
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  16132400 aatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 16132343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 19443012 - 19442955
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  19443012 aatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 19442955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 23017980 - 23017885
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||||| |||||| ||||| | || | |  |||||||||||| ||||| | || |||||||||||||||||| |||||||| | ||||||    
T  23017980 aattaaatctcattgcagctgaaaacaactaagttcaacatcatgttggcacaatggccgcaacttaaacaacttaattaaaatccaatttaaaca 23017885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 31736471 - 31736393
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 98  Q
    |||||||||| |||||||||||| || | ||| ||| ||| |  |||||||||| ||||||||||||||||||| |||||    
T  31736471 ttaaatctcattgcagcggaaaacat-taaattaaatatcgtaatgacacaacggcctcaacttaaacaacttattaaaa 31736393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 1640022 - 1640091
Alignment:
Q  255 caaactcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaa 322  Q
    ||||||||  || |||| |||||||| |  ||||||||||||||||||||||||||  ||||||||||||    
T  1640022 caaactctaccaaaatctgattctcctcacttggctcttctcctagctttctcttgatttttctcccaaa 1640091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 21119781 - 21119724
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctctt--gttttctcccaaaa 323  Q
    ||||| |||||||||  |||||||||||||||||||||||||   |||||||||||||    
T  21119781 aatcaaattctcccctcttggctcttctcctagctttctcttagtttttctcccaaaa 21119724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 23621921 - 23621879
Alignment:
Q  166 atcctcgtcctgttacgtatcagagcacctaagactcatgtga 208  Q
    |||||| ||||||||||||||||||| |||||||| |||||||    
T  23621921 atcctcatcctgttacgtatcagagctcctaagacacatgtga 23621879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 24551339 - 24551229
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||| | |||||||||||| | || | |  |||||| ||||| ||||| |  ||||||||||| |||||| ||| |||||||| ||||| | ||    
T  24551339 aattaaatcttattgcagcggaaaacaactaagttcaacatcgtgttggcacaatggtctcaacttaaataacttattaataatccagtttaaacaaatc 24551240  T
Q  116 ttcaacataaa 126  Q
    |||||||||||    
T  24551239 ttcaacataaa 24551229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 241
Target Start/End: Original strand, 1583932 - 1583965
Alignment:
Q  208 aacagcaactaacagctactactctgcatcacct 241  Q
    |||||||||||||||||||||||||| |||||||    
T  1583932 aacagcaactaacagctactactctggatcacct 1583965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 3852759 - 3852727
Alignment:
Q  173 tcctgttacgtatcagagcacctaagactcatg 205  Q
    |||||||||||||||||||||||||||| ||||    
T  3852759 tcctgttacgtatcagagcacctaagacacatg 3852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 1990406 - 1990170
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  1990406 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcactacggcctcaacttaaacaacttaataaaaatccag 1990307  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||||||    
T  1990306 tctaaacagtcttcaatataaaagtcataataaatcacgtaacatatggaaaacagtaaaaatccccatcccgttacgtatcagagcacctaagactcat 1990207  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1990206 gtgaacagcaactaacaactactactctgcatcacct 1990170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 13027540 - 13027303
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| |||    
T  13027540 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacattatgttggcacaacggcctcaacttaaacaacttaataaaaattcag 13027441  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatgg-aaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactca 203  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||| | |||  ||||||||||||||||||||||||||    
T  13027440 tctaaacagtcttcaacataagagtcataataaatcacgtaacatatggaaaaacaataaagatccccatcccattacgtatcagagcacctaagactca 13027341  T
Q  204 tgtgaacagcaactaacagctactactctgcatcacct 241  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  13027340 tgtgtacagcaactaacagcaactactctgcatcacct 13027303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 16326456 - 16326220
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  16326456 tcataatattaaaattaaatctcaatgcagtggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaataacttaataaaaatccag 16326357  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||||     
T  16326356 tttaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcaa 16326257  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||||| |||||||||||||||||    
T  16326256 gtgtaccgcaactaacagcaactactctgcatcacct 16326220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 34853729 - 34853493
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||    
T  34853729 tcataacatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaattcag 34853630  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| || ||| ||||| ||||||||||||||||||||||    
T  34853629 tctaaacagtcttcaacataaaagtcatgataaatcacgtaacatatggaaaacaataaagatcttcatcccgttacatatcagagcacctaagactcat 34853530  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || ||||||| |||| |||||||||||||||||    
T  34853529 gtgtaccgcaactagcagcaactactctgcatcacct 34853493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 3265946 - 3265772
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtct 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||  |||||||||||||    
T  3265946 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaatttgaacaacttaataaaaatcatgtctaaacagtct 3265847  T
Q  117 tcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||||    
T  3265846 tcaacataaaagtcatgataaatcacgtaacatatggaaaacaataaagatctccatcccgttacgtatcagagc 3265772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 36526930 - 36527104
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtct 116  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| | |||| || ||||||||||||||||||| |||||||||||||    
T  36526930 aattaaatctcaatgcatcggaaaatatcttaataaaacatcgtgttggcacaacggcttcaatttgaacaacttaataaaaatcctgtctaaacagtct 36527029  T
Q  117 tcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||||| | ||| |||||||||||||||    
T  36527030 tcaacataaaagtcataataaatcacgtaacatatggaaaataataaagatccccatcccgttacgtatcagagc 36527104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 10833314 - 10833224
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctct 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10833314 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctct 10833224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 10952736 - 10952651
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10952736 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 10952651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 10953665 - 10953580
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10953665 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 10953580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 18893728 - 18893819
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18893728 accttagttttgatgaacaaactcttacacaatgagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 18893819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 16727625 - 16727795
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||||||||| ||||| | |||||||||||||||||| || |||||||||| | ||| | ||||    
T  16727625 ttaaatctcaatgcagcggaaaacatttaaatttaacatcatgttggcacaatggcctcaacttaaacaactt-attaaaatccagtttgaacaaatctt 16727723  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||| | ||||||||| ||| |||| ||||||||||   || |||||| | |||||||||||||||||    
T  16727724 caacataaaa-tcataataaat-acggaacacatggaaaacaagcaaaatcctcattctgttacgtatcagagc 16727795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 18898055 - 18898112
Alignment:
Q  272 agattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18898055 agattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 18898112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 12507702 - 12507593
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    ||||||||||||||||||||||||| || | ||| ||||||| ||||| ||||||||||| |||||||| ||||| || ||||||||||||| || | ||    
T  12507702 aattaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcacaacgaccttaacttaaataactt-attaaaatccagtctagacaaatc 12507604  T
Q  116 ttcaacataaa 126  Q
    |||||||||||    
T  12507603 ttcaacataaa 12507593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 15025168 - 15024998
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacag-tctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||||||||| |||||||||||| ||||| ||||||| ||| |  ||||    
T  15025168 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacgacctcaatttaaacaacttattaaaa-tccagtccaaataaatctt 15025070  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||    ||||||||| | |||||| ||||||||||   ||||||| | ||| |||||||||||||||    
T  15025069 caacataaatac-ataataaat-atgtaacacatggaaaacaagcaagatccccatcccgttacgtatcagagc 15024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 9643684 - 9643855
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  ||| || ||||| ||||||| ||||||||||||||||| | | ||||||||||||| || | ||||    
T  9643684 ttaaatctcaatgcagcggaaaacatttaaattcaacttcgtgttggcacaacggcctcaacttaaacaactcatttaaaatccagtctagacaaatctt 9643783  T
Q  118 caacataaaagtt-ataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||  ||||| ||||||||| ||| |||| || ||||||| | ||||||| | ||| ||||||||| |||||    
T  9643784 caacat--aagttcataataaat-acgcaacacatagaaaacaatcaagatccccttcccgttacgtattagagc 9643855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 14440231 - 14440372
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| || ||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||| |  |    
T  14440231 aattaaatctcattgtagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattataatccagtttaaacaaaac 14440330  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  14440331 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 14440372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 22308510 - 22308369
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| ||||| |||||| | || | |  |||||||||||  ||||||| ||||||||||||||||||||| |||||||||| ||||| |  |    
T  22308510 aattaaatctcattgcagtggaaaacaactaagttcaacatcatgttagcacaacggcctcaacttaaacaacttaattaaaatccagtttaaacaaaac 22308411  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  22308410 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 22308369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 53647746 - 53647651
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||||| |||||||||||| | || | || ||||| |||||| ||||||| ||||||||||||||||||||| |||||||| | ||||||    
T  53647746 aattaaatctcattgcagcggaaaacaactaagtacaacattatgttggcacaacggcctcaacttaaacaacttaattaaaatccaatttaaaca 53647651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 21081589 - 21081648
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttg 64  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  21081589 tcataatatcaaaattaaatctcaattcagcggaaaatatcttaatgaaatatcatgttg 21081648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 55291579 - 55291523
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  55291579 aatcagattctcccctcttggctcttctcctagctttctcttggttttctcccaaaa 55291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 178456 - 178399
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  178456 aatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 178399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 13025546 - 13025489
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  13025546 aatcagattctcccctcttggctcttctcctagctttctcttgatttttctcccaaaa 13025489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 13029138 - 13029081
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  13029138 aatcagattctcccctcttggctcttctcctagctttctcttgatttttctcccaaaa 13029081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 12513733 - 12513566
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacag-tc 115  Q
    ||||||||||||||||||||||||| || | ||| ||||||  ||||| ||||| |||||     |||| |||||| ||||| ||||||||| |||  ||    
T  12513733 aattaaatctcaatgcagcggaaaacatttaaattaaacattgtgttggcacaatgacct-----taaaaaacttattaaaa-tccagtctagacaaatc 12513640  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||  | | |||||| ||||||||| ||||||||||  |||||||| | ||  |||||||||||||||    
T  12513639 ttcaacataaat-tcacaataaa-cacgtaacacatggaaaacagcaaagatccccatctcgttacgtatcagagc 12513566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 20416572 - 20416651
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 98  Q
    ||||||||||||||||||||||| || | |||  |||||| |  || ||||||||| ||||||||||||||||| |||||    
T  20416572 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtaatggcacaacgacgtcaacttaaacaacttattaaaa 20416651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 17547447 - 17547401
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttgtttt 314  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||    
T  17547447 aatcagattctcccctcttggctcttctcctagctttttcttgtttt 17547401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 10551399 - 10551457
Alignment:
Q  268 aatcagattctccccctttggctcttct-cctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||| |||||||||||||||  |||||||||||||    
T  10551399 aatcagattctcccctcttggctcttctccctagctttctcttggtttttctcccaaaa 10551457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 8492975 - 8492900
Alignment:
Q  114 tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||||| | ||||||||| |||||||| ||||||||||   ||||||  | |||||||||||||||||||    
T  8492975 tcttcaacataaaa-tcataataaat-acgtaacacatggaaaacaaacaagatctccatcctgttacgtatcagagc 8492900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 26895349 - 26895585
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  26895349 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 26895448  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  26895449 tctaaacagtcttcaacataaaagtcataataaatcacgtaatatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcat 26895548  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| |||  ||||||||||||||||||||||||||||    
T  26895549 gtgtacaataactaacagctactactctgcatcacct 26895585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 19803141 - 19803377
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  19803141 tcataatatcaaaattaaatctcaatgaagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacctaataaaaatccag 19803240  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |  || ||||||||||||||||||||||||||||    
T  19803241 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccacaccccgttacgtatcagagcacctaagactcat 19803340  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    | ||||||||||||| ||||||||| |||||||||||    
T  19803341 gcgaacagcaactaatagctactacactgcatcacct 19803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 22702116 - 22702352
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||     
T  22702116 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcttcaacttaaacaacttaataaaaatccaa 22702215  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||| ||||    
T  22702216 tctaaacagtcttcaacataaaagtcattataaatcacgtaacatatggaaaacaataaagatcctcatctcgttacgtatcagagcacctaagattcat 22702315  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||||| |||||||||||||||||    
T  22702316 gtgtaccgcaactaacagcaactactctgcatcacct 22702352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 21244855 - 21245068
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  21244855 tcataatatcaaaattaaatctcaatgcatcggaaaatatcttaataaaacattatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 21244954  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||||||||    
T  21244955 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatctccatcctgttacgtatcagagcacctaagactcat 21245054  T
Q  205 gtgaacagcaacta 218  Q
    ||||||| ||||||    
T  21245055 gtgaacaacaacta 21245068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 26900788 - 26900952
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  26900788 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 26900887  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcc 169  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  26900888 tctaaacagtcttcaacataaaagtcataataaatcacgtaatatatggaaaacaataaagatcc 26900952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 41300935 - 41300844
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41300935 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 41300844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 21072694 - 21072603
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  21072694 accttagttttgatgaacaaactcttacagaatcagattctccccctttggctcttctcttagctttctcttgttttctcccaaaacctctg 21072603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 27039837 - 27039696
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    ||||||||||||||||||||||||| | || |||  |||||| ||||| ||||| | |||||||||||| |||||| |||||||||||| ||||| |  |    
T  27039837 aattaaatctcaatgcagcggaaaacaactaaattcaacatcgtgttggcacaatggcctcaacttaaataacttattaaaaatccagtttaaacaaaac 27039738  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | ||||||||| |||||||| ||||||||||    
T  27039737 ttcaacataaaa-tcataataaat-acgtaacacatggaaaaca 27039696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 24782796 - 24782655
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| ||||| |  |    
T  24782796 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaagtccagtttaaacaaaac 24782697  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  24782696 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 24782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 10898651 - 10898481
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | ||| ||||||| ||||| | ||||||||| ||||||||| |||| || ||||||||||||| || | ||||    
T  10898651 ttaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcgcaacgaccttaacttaaacgactt-attaaaatccagtctagacgaatctt 10898553  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
     ||||| ||| | |||||||| ||| ||||| ||||||||||   ||||||| | ||| |||||||||||||||    
T  10898552 taacat-aaattcataataaa-cacataacacatggaaaacaaacaagatccccatcccgttacgtatcagagc 10898481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 22841975 - 22842060
Alignment:
Q  238 accttagttttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 323  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| | ||| |||||||| || |||||||||| ||||||||||||    
T  22841975 accttagttttgatgaataaagctcttacacaatcagattctcccac-ttgactcttctcataactttctcttgctttctcccaaaa 22842060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 25084594 - 25084689
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||||| |||||||||||  | || | |  |||||||||||| |||||||||||||| |||||||||||||| ||||| |||| ||||||    
T  25084594 aattaaatctcattgcagcggaaatcaactaagttcaacatcatgttggcacaacgacctcaatttaaacaacttaattaaaattcagtttaaaca 25084689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 14692689 - 14692780
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||| |||||||||||||| |  | |||  |||||||||||| ||||||| ||||||||||||||||||| |  ||||||||||||||||    
T  14692689 ttaaatcttaatgcagcggaaaacaattaaattcaacatcatgttggcacaacggcctcaacttaaacaacttatt--aaatccagtctaaaca 14692780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 5984581 - 5984719
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| ||||||| ||||||||| ||||||||  | |||||||||| ||||| | ||||    
T  5984581 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacggcctcaactttaacaactt-gttaaaatccagtttaaacaaatctt 5984679  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    ||||| |||| | ||||||||| |||||| | ||||||||||    
T  5984680 caacacaaaa-tcataataaat-acgtaatacatggaaaaca 5984719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 19357289 - 19357412
Alignment:
Q  66 cacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaa 164  Q
    ||||||| ||||||||||||||||||| | |||||||| |||| || | |||||||||| ||| | ||||||||| ||| |||| |||||||||| | ||    
T  19357289 cacaacggcctcaacttaaacaacttatttaaaatccaatctagacaaatcttcaacat-aaattcataataaat-acgcaacacatggaaaacaatcaa 19357386  T
Q  165 gatcctcgtcctgttacgtatcagag 190  Q
    ||||| | ||| ||||||||||||||    
T  19357387 gatccccttcccgttacgtatcagag 19357412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 25044521 - 25044624
Alignment:
Q  86 caacttaataaaaatccagtctaaacagtc-ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgta 184  Q
    ||||||| ||||||||| || |||||| || ||||||||||||   ||||||||| |||||||| ||||||||||||||| |||||| ||| ||||||||    
T  25044521 caacttattaaaaatccggtttaaacaatccttcaacataaaacc-ataataaat-acgtaacacatggaaaacattaaa-atcctcatcccgttacgta 25044617  T
Q  185 tcagagc 191  Q
    |||||||    
T  25044618 tcagagc 25044624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 5033205 - 5033121
Alignment:
Q  74 cctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    ||||||||||||||||||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  5033205 cctcaacttaaacaacttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 5033121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 6477212 - 6477155
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||   ||||||||||||||||||||||||||  |||||||||||||    
T  6477212 aatcagattctcccatcttggctcttctcctagctttctcttggtttttctcccaaaa 6477155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 21245757 - 21245799
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  21245757 aatcagattctcccctcttggctcttctcctagctttctcttg 21245799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 26904477 - 26904519
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  26904477 aatcagattctcccctcttggctcttctcctagctttctcttg 26904519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 18390095 - 18389926
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  ||| || ||||| ||||||  |||||||||||| |||||| |  ||||| ||||||||| | ||||    
T  18390095 ttaaatctcaatgcagcggaaaacatttaaattcaacttcgtgttggcacaacagcctcaacttaaataacttatt--aaatctagtctaaacaaatctt 18389998  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcct-cgtcctgttacgtatcagagc 191  Q
    | ||||||| |  |||||||| | ||||||| ||||||||||   ||||| || | |||||||||||||||||||    
T  18389997 c-acataaatg-cataataaa-cgcgtaacacatggaaaacaagtaagattctccatcctgttacgtatcagagc 18389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 22671108 - 22671162
Alignment:
Q  137 aatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||| ||||||||||   ||||||||| ||| |||||||||||||||    
T  22671108 aatcacgtaacacatggaaaacaagtaagatcctcatcccgttacgtatcagagc 22671162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 24273009 - 24272967
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg 310  Q
    ||||||||||||| |  ||||||||||||||||||||||||||    
T  24273009 aatcagattctcctctcttggctcttctcctagctttctcttg 24272967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 23084983 - 23085016
Alignment:
Q  175 ctgttacgtatcagagcacctaagactcatgtga 208  Q
    ||||||||||||||||| ||||||||||||||||    
T  23084983 ctgttacgtatcagagctcctaagactcatgtga 23085016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 23537437 - 23537673
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  23537437 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaataacttaataaaaatccag 23537536  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  23537537 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcat 23537636  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||||| |||||||||||||||||    
T  23537637 gtgtaccgcaactaacagcaactactctgcatcacct 23537673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 22468923 - 22469159
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  22468923 tcataatatcaaaattaaatctcaatgcagcggaaaatatctcaacaaaacatcatgttggcacaacggcctcaacttaaacaacttaataaagatccag 22469022  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||   ||| ||||||||||||||||||||||||||||    
T  22469023 tctaaacagtcttcaacataaaagtcataatgaatcacataacatatggaaaacaataaagatcccaatcccgttacgtatcagagcacctaagactcat 22469122  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22469123 gtgaacagcaactaacagcaactactctgcatcacct 22469159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 22359133 - 22358919
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||         |||||||||||    
T  22359133 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaa---------taaaaatccag 22359043  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||| |    
T  22359042 tctaaatagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcgt 22358943  T
Q  205 gtgaacagcaactaacagctacta 228  Q
    ||| ||| ||||||||||| ||||    
T  22358942 gtgtacaacaactaacagcaacta 22358919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 6555280 - 6555421
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  6555280 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaatgaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 6555379  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaa 146  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  6555380 tctaaacagtcttcaacataaaagtcataataaatcacgtaa 6555421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 6554679 - 6554820
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  6554679 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaatgaaacatcatgtttgcacaacggcctcaacttaaacaacttaataaaaatccag 6554778  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaa 146  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  6554779 tctaaacagtcttcgacataaaagtcataataaatcacgtaa 6554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 10815604 - 10815715
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  10815604 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccag 10815703  T
Q  105 tctaaacagtct 116  Q
    ||||||||||||    
T  10815704 tctaaacagtct 10815715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 23539812 - 23539903
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23539812 accttagttttgatgaacaatctcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 23539903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 23540587 - 23540683
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  23540587 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaataacttaataaaaatc 23540683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 26760606 - 26760747
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||| ||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||| |  |    
T  26760606 aattaaatctcattgcagcagaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaacaaaac 26760705  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  26760706 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 26760747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 16226258 - 16226429
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||||||| |||||||||||||| || | |||  ||| || ||||| ||||||| ||||||||||||||||||| | ||||||||||||| || | ||||    
T  16226258 ttaaatcttaatgcagcggaaaacatttaaattcaacttcgtgttggcacaacggcctcaacttaaacaacttatttaaaatccagtctagacaaatctt 16226357  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||| ||| | ||||||||| ||  |||| |||||||||| | ||||||  | ||| |||||||||||||||    
T  16226358 caacat-aaattcataataaat-acacaacacatggaaaacaatcaagatctccttcccgttacgtatcagagc 16226429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 25251494 - 25251323
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||||||||||||||||  |||| || | |||  |||||| ||||| ||||| | |||||||||||||||| | || |||||||||| || || | ||||    
T  25251494 ttaaatctcaatgcagcaaaaaacatttaaattcaacatcgtgttggcacaatggcctcaacttaaacaacat-attaaaatccagtttagacaaatctt 25251396  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagca 192  Q
    |||||||||| | ||||||||| |||||||| ||||||||||   ||||||| | ||| ||||||||||||||||    
T  25251395 caacataaaa-tcataataaat-acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagca 25251323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 25315279 - 25315108
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||||||||||||||||  |||| || | |||  |||||| ||||| ||||| | |||||||||||||||| | || |||||||||| || || | ||||    
T  25315279 ttaaatctcaatgcagcaaaaaacatttaaattcaacatcgtgttggcacaatggcctcaacttaaacaacat-attaaaatccagtttagacaaatctt 25315181  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagca 192  Q
    |||||||||| | ||||||||| |||||||| ||||||||||   ||||||| | ||| ||||||||||||||||    
T  25315180 caacataaaa-tcataataaat-acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagca 25315108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 22358929 - 22358896
Alignment:
Q  208 aacagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||||||||||||||||||||    
T  22358929 aacagcaactaacagctactactctgcatcacct 22358896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 10815714 - 10815761
Alignment:
Q  194 ctaagactcatgtgaacagcaactaacagctactactctgcatcacct 241  Q
    |||||||||||||| ||  ||||||||||| |||||||||||||||||    
T  10815714 ctaagactcatgtgtaccacaactaacagcaactactctgcatcacct 10815761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 208
Target Start/End: Complemental strand, 21906205 - 21906174
Alignment:
Q  177 gttacgtatcagagcacctaagactcatgtga 208  Q
    ||||||||||||||||||||||||||||||||    
T  21906205 gttacgtatcagagcacctaagactcatgtga 21906174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 17813577 - 17813617
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  17813577 ttggctcttctcctagctttctcttggtttttctcccaaaa 17813617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 24276456 - 24276416
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  24276456 ttggctcttctcctagctttctcttggtttttctcccaaaa 24276416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 24385757 - 24385797
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  24385757 ttggctcttctcctagctttctcttggtttttctcccaaaa 24385797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 10817906 - 10817945
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaa 322  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  10817906 ttggctcttctcctagctttctcttggtttttctcccaaa 10817945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 21663140 - 21663062
Alignment:
Q  247 ttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||| |||| ||| |||| |||||| |||  |||||||||||| |||||||||||||  |||||||||||||    
T  21663140 ttgatgaacaaaactct-acagaatctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaa 21663062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 22777028 - 22776989
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaa 322  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  22777028 ttggctcttctcctagctttctcttggtttttctcccaaa 22776989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 24278137 - 24278105
Alignment:
Q  209 acagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||||||||||| |||||||    
T  24278137 acagcaactaacagctactactctggatcacct 24278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 24384076 - 24384108
Alignment:
Q  209 acagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||||||||||| |||||||    
T  24384076 acagcaactaacagctactactctggatcacct 24384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 4832683 - 4832447
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  4832683 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccag 4832584  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  4832583 tctaaacagtcttcaacataaaagtcatagtaaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcat 4832484  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||||| |||||||||||||||||    
T  4832483 gtgtaccgcaactaacagcaactactctgcatcacct 4832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 4829388 - 4829152
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||    
T  4829388 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacagcctcaacttaaacaacttaataaaaattcag 4829289  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  4829288 tctaaacagtcttcaacataaaagtcatagtaaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcat 4829189  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||||| |||||||||||||||||    
T  4829188 gtgtaccgcaactaacagcaactactctgcatcacct 4829152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 4835978 - 4835742
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  4835978 tcataatatctaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccag 4835879  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  4835878 tctaaacaatcttcaacataaaagtcatagtaaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcat 4835779  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || |||||||||||| |||||||||||||||||    
T  4835778 gtgtaccgcaactaacagcaactactctgcatcacct 4835742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 15988931 - 15989167
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| |||    
T  15988931 tcatgatatcaaaattaaatctcaatgcagcggaaaatattttaataaaacatcatgttggcacaacggcctcaacttaaataacttaataaaaattcag 15989030  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||||| |||||||||||    
T  15989031 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatcaacatcccgttacgtatcagagcatctaagactcat 15989130  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| || | |||||||||| |||||||||||||||||    
T  15989131 gtgtaccgtaactaacagcaactactctgcatcacct 15989167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 33184942 - 33185131
Alignment:
Q  1 catctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  33184942 catctcataatatca-aattaaatctcaatgcagcggaaaatatctaaataaaacatcatgttggcacaacggcttcaacttaaacaacttaatgaaaat 33185040  T
Q  101 ccagtctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||  | ||| |||| ||||||||||    
T  33185041 ccagtctaaacagtcttcaacataaaagtcataataaatcacgtaaaatatggaaaacaataaagatcaccatcccgttatgtatcagagc 33185131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 15747562 - 15747471
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15747562 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 15747471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 24046485 - 24046394
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24046485 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 24046394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 4830163 - 4830072
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4830163 accttagttttgatgaacaatctcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 4830072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 4833458 - 4833367
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4833458 accttagttttgatgaacaatctcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 4833367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 14184127 - 14184299
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacag-tc 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||| || ||||||||  ||||| || ||    
T  14184127 aattaaatctcaatgcaacggaaaatatcttaataaaacatcatgttggcacaacggcttcaactt-aacaactt-attaaaatccaaactaaatagttc 14184224  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||| | |||  || | |||||||||||||||||||   ||||||| | ||| |||||||||||||||    
T  14184225 ttcaacataaaaatcatagcaagt-acgtaacatatggaaaacaagtaagatccccatcccgttacgtatcagagc 14184299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 14187657 - 14187838
Alignment:
Q  7 ataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtc 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||| |||||||| || ||||||||  |    
T  14187657 ataatatca-aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcaaaacggcttcaactt-aacaactt-attaaaatccaaac 14187753  T
Q  107 taaacag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||| || |||||||||||||| | |||  || | |||||||||||||||||||   ||||||  | ||| |||||||||||||||    
T  14187754 taaatagttcttcaacataaaaatcatagcaagt-acgtaacatatggaaaacaagtaagatctccatcccgttacgtatcagagc 14187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 15607743 - 15607912
Alignment:
Q  21 aaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttca 119  Q
    ||||||||||||||||||||| || | |||  |||||| ||||| ||||||  ||||||||||||||||||||| |||||||||| ||||| | ||||||    
T  15607743 aaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaaccgcctcaacttaaacaacttaattaaaatccagtttaaacaaatcttca 15607842  T
Q  120 acataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagca 192  Q
    |||||||| | || |||||| |||||||| ||||||||||  ||| |||| | ||| ||||||||||||||||    
T  15607843 acataaaa-tcatgataaat-acgtaacacatggaaaacaacaaa-atccccatcccgttacgtatcagagca 15607912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 32467842 - 32467735
Alignment:
Q  21 aaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa-cagtcttca 119  Q
    ||||||||||||||||||||| || | |||  || ||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||  | ||||||    
T  32467842 aaatctcaatgcagcggaaaacatttaaattcaatatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaataaatcttca 32467743  T
Q  120 acataaaa 127  Q
    ||||||||    
T  32467742 acataaaa 32467735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 10358263 - 10358122
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||||| |||||| |||||||||||||| |||||||||| ||||| |  |    
T  10358263 aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaacggcctcaaattaaacaacttaattaaaatccagtttaaacaaaac 10358164  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  10358163 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 10358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 14912162 - 14912217
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 323  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  14912162 aatctgattctcctcccttggctcttctcctagctttctcttgttttctcccaaaa 14912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 12729821 - 12729764
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  12729821 aatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 12729764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 20898726 - 20898669
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  20898726 aatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 20898669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 16027821 - 16027697
Alignment:
Q  66 cacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaa 164  Q
    ||||||| |||||||||||||||||| || |||||||||||||  | | |||||||||||||| | | || |||| |||||||| ||||||||||   ||    
T  16027821 cacaacggcctcaacttaaacaactt-attaaaatccagtctaggcaaatcttcaacataaaa-tcaaaacaaat-acgtaacacatggaaaacaagtaa 16027725  T
Q  165 gatcctcgtcctgttacgtatcagagca 192  Q
    ||||| | ||| ||||||||||||||||    
T  16027724 gatccccatcccgttacgtatcagagca 16027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 18230817 - 18230873
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaa 322  Q
    |||| ||||||||||  ||||||||||||||||||||||||||  ||||||||||||    
T  18230817 aatctgattctccccacttggctcttctcctagctttctcttggtttttctcccaaa 18230873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 33685347 - 33685314
Alignment:
Q  208 aacagcaactaacagctactactctgcatcacct 241  Q
    |||||||||||||||||||||||||| |||||||    
T  33685347 aacagcaactaacagctactactctggatcacct 33685314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 3336651 - 3336683
Alignment:
Q  209 acagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||||||||||| |||||||    
T  3336651 acagcaactaacagctactactctggatcacct 3336683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 14049682 - 14049738
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaa 323  Q
    |||| |||||||| |  ||||||||||||||| ||||||||| ||||||||||||||    
T  14049682 aatctgattctcctcacttggctcttctcctacctttctcttggttttctcccaaaa 14049738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 47312 - 47548
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  47312 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 47411  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||    
T  47412 tttaaacagtcttcaacataaaagttataataaatcacgtaacacatggaaaacaataaagatccccatcccgttatgtatcagagcacctaagactcat 47511  T
Q  205 gtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||| |  |||||||||||| |||||||||||||||||    
T  47512 gtgtagtgcaactaacagcaactactctgcatcacct 47548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 48742342 - 48742575
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||| |||    
T  48742342 tcataatattaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaaattagtaaaaattcag 48742441  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    | |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||  ||||||||||||||||||||||||||||    
T  48742442 tataaatagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatctccatctcgttacgtatcagagcacctaagactcat 48742541  T
Q  205 gtgaacagcaactaacagctactactctgcatca 238  Q
    ||| ||| ||||||||||||||||||||||||||    
T  48742542 gtgtacaacaactaacagctactactctgcatca 48742575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 14190139 - 14189945
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  14190139 tcataatatcaaaattaaatctcaatgcagaggaaaatatcttaatagaacatcatgttgccacaacggcctcaacttaaacaacttaataaaaatccag 14190040  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaaga 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | | ||| |||||||||||||||||||||||    
T  14190039 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagattcccatcccgttacgtatcagagcacctaaga 14189945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 13254406 - 13254598
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  13254406 tcataatattaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccag 13254505  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaa 197  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||| ||||||||||||||||    
T  13254506 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttatgtatcagagcacctaa 13254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 15212580 - 15212774
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||    
T  15212580 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcagaacggcctcaacttaaactacttaataaaaatccag 15212679  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagac 200  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||| ||||||    
T  15212680 tctaaacagtcttcaacataagagtcataat-aatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacttaagac 15212774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 831639 - 831549
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctct 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  831639 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctct 831549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 1196819 - 1196729
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctct 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1196819 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctct 1196729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 34958608 - 34958693
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34958608 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 34958693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 14192897 - 14192781
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||| |||||||||| |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  14192897 tcataatatcaaaattcaatctcaatgtagcgaaaaatatcttaatagaacatcatgttggcacaacggcctcaacttaaacaacttcataaaaatccag 14192798  T
Q  105 tctaaacagtcttcaac 121  Q
    |||||||||||||||||    
T  14192797 tctaaacagtcttcaac 14192781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 11662152 - 11662243
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  11662152 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctaactttctcttgttttctcccaaaacctctg 11662243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 13151464 - 13151323
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||| |  |    
T  13151464 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaacaaaac 13151365  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  13151364 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 13151323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 10660856 - 10660719
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | ||| || |||| ||||| ||||||| |||||||||||||||||| || |||||||||||||||| | ||||    
T  10660856 ttaaatctcaatgcagcggaaaacatttaaatcaa-catcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtctaaacaaatctt 10660759  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||| ||| | ||||||||| |||||||| ||||||||||    
T  10660758 caacat-aaattcataataaat-acgtaacacatggaaaaca 10660719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 11065611 - 11065752
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||| ||||| |||||||||| ||||| |  |    
T  11065611 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaagttaattaaaatccagtttaaacaaaac 11065710  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  11065711 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 11065752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 15121144 - 15121003
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| ||||| |  |    
T  15121144 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacagcctcaacttaaacaacttaattaaaatccagtttaaacaaaac 15121045  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  15121044 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 15121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 32997072 - 32997242
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||| ||||| || | |||  ||| || ||||| ||||||| |||||||||||||||||| || |||||||||| ||||| | ||||    
T  32997072 ttaaatctcaatgcagcagaaaacatttaaattcaacgtcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtttaaacaaatctt 32997170  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||| | |||| |||| |||||||| ||||||||||   |  |||||| ||| |||||||||||||||    
T  32997171 caacataaaa-tcataacaaat-acgtaacacatggaaaacaagcagaatcctcatcccgttacgtatcagagc 32997242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 44373127 - 44373268
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||| |  |    
T  44373127 aattaaatctcattgcagcggaaaacaactaagtttaacatcatgttggcacaacggtctcaacttaaacaatttaattaaaatccagtttaaacaaaac 44373226  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  44373227 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 44373268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 44381983 - 44382124
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||| |  |    
T  44381983 aattaaatctcattgcagcggaaaacaactaagtttaacatcatgttggcacaacggtctcaacttaaacaatttaattaaaatccagtttaaacaaaac 44382082  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  44382083 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 44382124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 13700547 - 13700377
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||| | ||||| || | |||  |||||| ||||| ||||||||||||||||||| ||| ||||| |||||||||| ||||| | ||||    
T  13700547 ttaaatctcaatgcaacagaaaacatttaaattcaacatcctgttggcacaacgacctcaacttaatcaatttaattaaaatccagtttaaacaaatctt 13700448  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
     |||||| || | || |||||| ||||||||| |||||||||  ||| |||| | ||| |||||||||||||||    
T  13700447 taacatagaa-tcatgataaat-acgtaacatgtggaaaacagcaaa-atccccatcccgttacgtatcagagc 13700377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 10628926 - 10628809
Alignment:
Q  208 aacagcaactaacagctactactctgcatcaccttagttttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttct 306  Q
    |||||||| ||||||| ||||||||| |||||||| |  |||||||||||| ||||   | ||| |||||||||||  ||||||||||||||||||||||    
T  10628926 aacagcaaataacagcaactactctggatcacctt-gaattgatgaacaaagctctacaaaaattagattctcccctcttggctcttctcctagctttct 10628828  T
Q  307 cttg--ttttctcccaaaa 323  Q
    ||||  |||||||||||||    
T  10628827 cttggtttttctcccaaaa 10628809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 10638621 - 10638504
Alignment:
Q  208 aacagcaactaacagctactactctgcatcaccttagttttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttct 306  Q
    |||||||| ||||||| ||||||||| |||||||| |  |||||||||||| ||||   | ||| |||||||||||  ||||||||||||||||||||||    
T  10638621 aacagcaaataacagcaactactctggatcacctt-gaattgatgaacaaagctctacaaaaattagattctcccctcttggctcttctcctagctttct 10638523  T
Q  307 cttg--ttttctcccaaaa 323  Q
    ||||  |||||||||||||    
T  10638522 cttggtttttctcccaaaa 10638504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 12370518 - 12370623
Alignment:
Q  53 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 151  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| ||||| |  ||||||||||||| | || |||||| |||||||| ||    
T  12370518 aacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatcaagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacat 12370615  T
Q  152 ggaaaaca 159  Q
    ||||||||    
T  12370616 ggaaaaca 12370623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 36687092 - 36686997
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||| | |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| ||||| |||| ||||||    
T  36687092 aattaaatctgattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaattcagtttaaaca 36686997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 36706503 - 36706362
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||| ||||| |||||||||||| | || | |  |||||| ||||| ||||||| |||||||||||||| |||| ||||||| | || ||||| | ||    
T  36706503 aattaagtctcattgcagcggaaaacaactaagttcaacatcgtgttggcacaacggcctcaacttaaacagcttattaaaaattcggtttaaacaattc 36706404  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | ||||||||| |||||||| ||||||||||    
T  36706403 ttcaacataaaa-tcataataaat-acgtaacacatggaaaaca 36706362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 14192782 - 14192694
Alignment:
Q  141 acgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacc 240  Q
    ||||||||||||| ||||| ||||||||| | ||| ||||||||||||||||||||||            ||||||||||||||||||||||||||||||    
T  14192782 acgtaacatatgggaaacaataaagatccccatcccgttacgtatcagagcacctaag------------agcaactaacagctactactctgcatcacc 14192695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 32435317 - 32435258
Alignment:
Q  53 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    ||||| |||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  32435317 aacattatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaaca 32435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 13256769 - 13256831
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaatctctg 329  Q
    |||| ||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||    
T  13256769 aatctgattctccccacttggctcttctcctagctttctcttggttttctcccaaaacctctg 13256831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 21518282 - 21518231
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttgttttctccc 319  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||    
T  21518282 aatcagaatctcccttcttggctcttctcctagctttctcttgttttctccc 21518231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 8249225 - 8249183
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  8249225 aatcagattctcccctcttggctcttctcctagctttctcttg 8249183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 13898547 - 13898604
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  ||||||||||||||||||||||| ||  |||||||||||||    
T  13898547 aatcagattctcccctcttggctcttctcctagctttctcatggtttttctcccaaaa 13898604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 15214629 - 15214686
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  |||||||||||| |||||||||||||  |||||||||||||    
T  15214629 aatcagattctcccctcttggctcttctcgtagctttctcttggtttttctcccaaaa 15214686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 23556400 - 23556478
Alignment:
Q  247 ttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||| |||| ||| |||| ||||||||||  |||||||||||| |||||||||||||  |||||||||||||    
T  23556400 ttgatgaacaaagctct-acagaatctgattctccccacttggctcttctcttagctttctcttggtttttctcccaaaa 23556478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 17131344 - 17131205
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| || | |||  |||||| ||||| || |||| ||||||| | |||||||| || ||||||||||||| || | ||    
T  17131344 aattaaatctcattgcagcggaaaacatttaaattcaacatcgtgttggcataacggcctcaacct-aacaactt-attaaaatccagtctagacaattc 17131247  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    ||||||||| || | ||||||||| |||||| | ||||||||||    
T  17131246 ttcaacatagaa-tcataataaat-acgtaagacatggaaaaca 17131205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 319
Target Start/End: Original strand, 48744605 - 48744656
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttgttttctccc 319  Q
    ||||||||||||| |  |||||||||||||||||||||||||| ||| ||||    
T  48744605 aatcagattctccactattggctcttctcctagctttctcttggtttttccc 48744656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 4070232 - 4070355
Alignment:
Q  66 cacaacgacctcaacttaaacaacttaataaaaatccagtctaaacag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaa 164  Q
    |||||||  |||||||||||||||||| ||||| || |||||| |||  |||||||||||||| | |||| || | |||||||| ||||||||||   ||    
T  4070232 cacaacggtctcaacttaaacaacttattaaaattc-agtctagacaaatcttcaacataaaa-tcataacaatt-acgtaacacatggaaaacaagtaa 4070328  T
Q  165 gatcctcgtcctgttacgtatcagagc 191  Q
    ||||| | ||| |||||||||||||||    
T  4070329 gatccccatcccgttacgtatcagagc 4070355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 16107815 - 16107777
Alignment:
Q  286 tggctcttctcctagctttctctt-gttttctcccaaaa 323  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16107815 tggctcttctcctagctttctcttggttttctcccaaaa 16107777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 10634481 - 10634441
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  10634481 ttggctcttctcctagctttctcttggtttttctcccaaaa 10634441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 15280724 - 15280800
Alignment:
Q  31 gcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtcta 108  Q
    ||||||||||| || | ||| ||||||| |  || ||||||| |||||||||||||||||| || |||||||||||||    
T  15280724 gcagcggaaaacatttaaattaaacatcgtaatggcacaacggcctcaacttaaacaactt-attaaaatccagtcta 15280800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 15732229 - 15732196
Alignment:
Q  208 aacagcaactaacagctactactctgcatcacct 241  Q
    |||||||||||||||||||||||||| |||||||    
T  15732229 aacagcaactaacagctactactctggatcacct 15732196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 24977377 - 24977579
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  24977377 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccag 24977476  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcat 204  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  24977477 tctaaacagtcttcaacataaaagtcatagtaaatcacgtaacataaggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcat 24977576  T
Q  205 gtg 207  Q
    |||    
T  24977577 gtg 24977579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 41682626 - 41682435
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  41682626 tcataatatca-aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 41682528  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaa 197  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  41682527 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaa 41682435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 19878519 - 19878704
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19878519 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaa-catcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 19878617  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||   ||| |||||||||||||||    
T  19878618 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaatatcccgatcccgttacgtatcagagc 19878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 241
Target Start/End: Original strand, 19881266 - 19881425
Alignment:
Q  82 taaacaacttaataaaaatccagtctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttac 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||    
T  19881266 taaacaacttaataaaaatccagtctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttac 19881365  T
Q  182 gtatcagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 241  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  19881366 gtatcagagcacctaagactcatgtgaagagcaactaacggctactactctgaatcacct 19881425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 19664234 - 19664402
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | ||| ||||||| ||||| ||||||| |||||||||||||||||| || |||||||||| ||||| | ||||    
T  19664234 ttaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtttaaacaaatctt 19664332  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagag 190  Q
    |||||||||| | ||||||||| |||||||| ||||||||||  ||| |||| | ||| ||||||||||||||    
T  19664333 caacataaaa-tcataataaat-acgtaacacatggaaaacaacaaa-atccccatcccgttacgtatcagag 19664402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 25850100 - 25849928
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    ||||||||||||||||||||||||| | || | |  |||||| ||||| ||||| | ||||||||||||||||||| ||||||| |||| ||||| | ||    
T  25850100 aattaaatctcaatgcagcggaaaacaactaagttcaacatcgtgttggcacaatggcctcaacttaaacaacttattaaaaattcagtttaaacaaatc 25850001  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||| | ||||||||| |||||||| ||||||||||| ||| |||| | ||| |||||||||||||||    
T  25850000 ttcaacataaaa-tcataataaat-acgtaacacatggaaaacatcaaa-atccccatcccgttacgtatcagagc 25849928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 23417795 - 23417934
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa-cagtctt 117  Q
    ||||||||||||||||||||||| || | |||  ||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||  | ||||    
T  23417795 ttaaatctcaatgcagcggaaaacatttaaattcaacatcaggttggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaataaatctt 23417894  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||| | || |||||| |||||||| ||||||||||    
T  23417895 caacataaaa-tcatgataaat-acgtaacacatggaaaaca 23417934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 39696446 - 39696274
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    ||||||||||||||||||||||||| || | ||| ||||||| ||||| ||||||| ||| |||||||||||||| || ||||||||||||| || | |     
T  39696446 aattaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcacaacggccttaacttaaacaactt-attaaaatccagtctagacaaatt 39696348  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||| ||||||| | ||||||||| |||||||| ||||||||||   || |||||| ||| |||||||||||||||    
T  39696347 ttcagcataaaa-tcataataaat-acgtaacacatggaaaacaagcaaaatcctcatcccgttacgtatcagagc 39696274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 23946729 - 23946899
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||  ||||| ||||||| |||||||||||||||||| || ||||||||||||| || | ||||    
T  23946729 ttaaatctcaatgcagcggaaaacatttaaattcaacattgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtctagacaaatctt 23946827  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||| | ||||||||| |||||| | ||||||||||   ||||||| | | | |||||||||||||||    
T  23946828 caacataaaa-tcataataaat-acgtaatacatggaaaacaagcaagatccccattccgttacgtatcagagc 23946899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 42267422 - 42267251
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | ||| ||||||  ||||| ||||||| ||||||||||||||||||| | ||||||||| ||| || | ||||    
T  42267422 ttaaatctcaatgcagcggaaaacatttaaattaaacattgtgttggcacaacggcctcaacttaaacaacttatttaaaatccagcctagacaaatctt 42267323  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||| ||  | ||||||||| ||| |||| |||||||||| | ||||||| | ||  |||||||||||||||    
T  42267322 caacat-aatttcataataaat-acgcaacacatggaaaacaatcaagatccacttctcgttacgtatcagagc 42267251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 21398418 - 21398523
Alignment:
Q  53 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 151  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||    
T  21398418 aacatcatgttggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacat 21398515  T
Q  152 ggaaaaca 159  Q
    ||||||||    
T  21398516 ggaaaaca 21398523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 21792911 - 21793016
Alignment:
Q  53 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 151  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||    
T  21792911 aacatcatgttggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacat 21793008  T
Q  152 ggaaaaca 159  Q
    ||||||||    
T  21793009 ggaaaaca 21793016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 22585334 - 22585242
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||||||||||||||||||||| || |||||||||| ||||||    
T  22585334 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacgacctcaacttaaacaactt-attaaaatccagtttaaaca 22585242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 20180392 - 20180251
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||| |  |    
T  20180392 aattaaatctcattgcagcggaaaacaactaagtttaacatcatgttggcacaacggtctcaacttaaacaatttaattaaaatccagtttaaacaaaac 20180293  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  20180292 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 20180251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 22243859 - 22243962
Alignment:
Q  23 atctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaac 121  Q
    |||||||||||||||||||||| | | | |||||||||  || ||||||| |||||||||||||||||| || ||||||||||||| || | ||||||||    
T  22243859 atctcaatgcagcggaaaatatttaatttaaacatcataatggcacaacggcctcaacttaaacaactt-attaaaatccagtctagacaaatcttcaac 22243957  T
Q  122 ataaa 126  Q
    |||||    
T  22243958 ataaa 22243962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 6103538 - 6103359
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||||||||| |||||||||||| || | | | ||||||| |  || ||||||| |||||||||||||||||| || |||||||||||||  | | ||||    
T  6103538 ttaaatctcattgcagcggaaaacatttaagttaaacatcgtagtggcacaacggcctcaacttaaacaactt-attaaaatccagtctaggcaaatctt 6103440  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagac 200  Q
    |||||||||| | | ||  ||| |||||||| ||||||||||   ||||||| | | | ||||||||||||||||||||||||    
T  6103439 caacataaaa-tcaaaacgaat-acgtaacacatggaaaacaagtaagatccccattccgttacgtatcagagcacctaagac 6103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 17217037 - 17217116
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 98  Q
    ||||||||||||||||||||||| || | ||| ||||||| | ||| ||||| | ||||||||||||||||||| |||||    
T  17217037 ttaaatctcaatgcagcggaaaacatttaaattaaacatcgtattggcacaatggcctcaacttaaacaacttattaaaa 17217116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 23888178 - 23888256
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaa 97  Q
    ||||||||||||||||||||||| || | ||| ||||||| |  || ||||||| ||||||||||||||||||| ||||    
T  23888178 ttaaatctcaatgcagcggaaaacatttaaattaaacatcgtaatggcacaacggcctcaacttaaacaacttattaaa 23888256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 8596 - 8669
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaactta 92  Q
    ||||||||||||||||||||||| || |  ||  |||||| ||||| ||||||| |||||||||||||||||||    
T  8596 ttaaatctcaatgcagcggaaaacatttagattcaacatcttgttggcacaacggcctcaacttaaacaactta 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 17908529 - 17908360
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||||||||| || ||||||||| || | ||| ||||||| |  || ||||||| |||||||||||||||||| || |||||||||||||  | | ||||    
T  17908529 ttaaatctcattgtagcggaaaacat-taaattaaacatcgtaatggcacaacggcctcaacttaaacaactt-attaaaatccagtctaggcaaatctt 17908432  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||| | ||||  | | |||||||| ||||||||||   ||||||| | ||| |||||||||||||||    
T  17908431 caacataaaa-tcataa-catttacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 17908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 15635064 - 15635013
Alignment:
Q  274 attctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  15635064 attctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 15635013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 21860508 - 21860451
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||| |||||||| |  ||||||||||||||||||||||||||  |||||||||||||    
T  21860508 aatctgattctcctcacttggctcttctcctagctttctcttggtttttctcccaaaa 21860451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 22815555 - 22815514
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaat 324  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  22815555 ttggctcttctcctagctttctcttggtttttctcccaaaat 22815514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 6794 - 6979
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||     
T  6794 tcataatatca-aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccaa 6892  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||   ||| |||||||||||||||    
T  6893 tctaaatagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatcccgatcccgttacgtatcagagc 6979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 1e-72; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 12359957 - 12359772
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12359957 tcataatatca-aattaaatttcaatgcagcgaaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccag 12359859  T
Q  105 tctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  12359858 tctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatccagttacgcatcagagc 12359772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 21652507 - 21652608
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||| |||    
T  21652507 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcactatggcctcaacttaaacaacttaataaaaattcag 21652606  T
Q  105 tc 106  Q
    ||    
T  21652607 tc 21652608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 28313395 - 28313480
Alignment:
Q  238 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaa 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  28313395 accttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctaactttcttttgttttctcccaaaa 28313480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 24725771 - 24725913
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag-tctaaac-agt 114  Q
    ||||||||||||||||||||||||| || | |||  |||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||| | |    
T  24725771 aattaaatctcaatgcagcggaaaacatttaaattcaacaccatgttggcacaacgacctcaacttaaacaacttaattaaaatccagttttaaacaaat 24725870  T
Q  115 cttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    ||||||||||||| | || |||||| |||||||| ||||||||||    
T  24725871 cttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 24725913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 45753917 - 45754087
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||| ||||||||||||||||||||| | |||  |||||||||||| ||||||| ||||||||||| |||||| || | || ||||| || || | ||||    
T  45753917 ttaagtctcaatgcagcggaaaatatttaaattcaacatcatgttggcacaacggcctcaacttaagcaactt-attagaacccagtttagacaattctt 45754015  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||| | ||||||||| |||||||| ||| ||||||   ||||||||| |||||||||||||||||||    
T  45754016 caacataaaa-tcataataaat-acgtaacacatgaaaaacaagcaagatcctcatcctgttacgtatcagagc 45754087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 42696169 - 42696277
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||||||||| ||||||| |||||||||||||||||| || |||||||||| ||||| | ||||    
T  42696169 ttaaatctcaatgcagcggaaaacatttaaattcaacatcatgttggcacaacggcctcaacttaaacaactt-attaaaatccagtttaaacaaatctt 42696267  T
Q  118 caacataaaa 127  Q
    ||||||||||    
T  42696268 caacataaaa 42696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 22348820 - 22348991
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  ||| || ||||| ||||||  ||||||||||||||||| | | ||||||||||||| || | ||||    
T  22348820 ttaaatctcaatgcagcggaaaacatttaaattcaacttcgtgttggcacaacagcctcaacttaaacaactaatttaaaatccagtctagacaaatctt 22348919  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||| ||  | ||||||||| ||| |||| |||||||||| | ||||||| | || ||||||||||||||||    
T  22348920 caacat-aatttcataataaat-acgcaacacatggaaaacaatcaagatccccttcatgttacgtatcagagc 22348991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 24724433 - 24724344
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtcta 108  Q
    |||||| ||||| |||||||||| || | ||| ||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  24724433 ttaaatttcaattcagcggaaaacatttaaattaaacatcgtgttggcacaacgacctcaacttaaacaacttatttaaaatccagtcta 24724344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 51475281 - 51475449
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  ||| || ||||| ||||||| | |||||||||| |||||| |  ||||||||||||||| | ||||    
T  51475281 ttaaatctcaatgcagcggaaaacatttaaattcaacttcgtgttggcacaacggcttcaacttaaataacttatt--aaatccagtctaaacaaatctt 51475378  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaacattaaaga-tcctcgtcctgttacgtatcaga 189  Q
     ||||| ||| | |||||||| ||||||||| ||||||||||   |||| ||||| ||| |||||||||||||    
T  51475379 taacat-aaattcataataaa-cacgtaacacatggaaaacaagcaagattcctcatcccgttacgtatcaga 51475449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 21660424 - 21660502
Alignment:
Q  247 ttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||| |||| ||| ||||||||||| |||  ||||||||||||||||||||||||||  |||||||||||||    
T  21660424 ttgatgaacaaagctct-acaaaatcagattcttccctcttggctcttctcctagctttctcttggtttttctcccaaaa 21660502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 19762644 - 19762472
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaa-caacttaataaaaatccagtctaaac-agt 114  Q
    ||||||||||||||||| ||||||| | || | |  |||||| || || || || | || ||||||||| ||||||| |||||||||||| ||||| | |    
T  19762644 aattaaatctcaatgcatcggaaaacaactaagttcaacatcgtgatggcataatggccccaacttaaaacaacttattaaaaatccagtttaaacaaat 19762545  T
Q  115 cttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagag 190  Q
    ||||||| ||||| | ||||||||| |||||||| ||||||||||  ||| || ||| ||| ||||||||||||||    
T  19762544 cttcaacgtaaaa-tcataataaat-acgtaacacatggaaaacagcaaa-attctcatcccgttacgtatcagag 19762472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 13527690 - 13527633
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  |||||||||||||||||||| |||||  |||||||||||||    
T  13527690 aatcagattctcccctcttggctcttctcctagctttttcttggtttttctcccaaaa 13527633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 18271397 - 18271454
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||| |||||||| || ||||||||||||||||||||||||||  |||||||||||||    
T  18271397 aatctgattctcctcccttggctcttctcctagctttctcttggtttttctcccaaaa 18271454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 1641817 - 1641927
Alignment:
Q  78 aacttaaacaacttaataaaaatccagtctaaacag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcct 176  Q
    ||||||||||||||| ||||| ||||||||| |||  |||||||||||||  | |||||||| ||||||||| ||||||||||   ||||||| | |||     
T  1641817 aacttaaacaacttattaaaa-tccagtctagacaaatcttcaacataaat-tcataataaa-cacgtaacacatggaaaacaaacaagatccccatccc 1641913  T
Q  177 gttacgtatcagag 190  Q
    ||||||||||||||    
T  1641914 gttacgtatcagag 1641927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 18276056 - 18276108
Alignment:
Q  273 gattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||| || ||||||||||||||||||||||||||  |||||||||||||    
T  18276056 gattctcctcccttggctcttctcctagctttctcttggtttttctcccaaaa 18276108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 323
Target Start/End: Original strand, 20805423 - 20805454
Alignment:
Q  292 ttctcctagctttctcttgttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||||||||    
T  20805423 ttctcctagctttctcttgttttctcccaaaa 20805454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 13301275 - 13301349
Alignment:
Q  21 aaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaa 97  Q
    |||||||| |||||||||||| ||  |||| ||||| | |  |||||||||||||||||| ||||||||||| ||||    
T  13301275 aaatctcattgcagcggaaaacat--taattaaacaacgtaatgacacaacgacctcaacataaacaacttattaaa 13301349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 28205203 - 28205170
Alignment:
Q  208 aacagcaactaacagctactactctgcatcacct 241  Q
    |||||||||||||||||||||||||| |||||||    
T  28205203 aacagcaactaacagctactactctggatcacct 28205170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 13227967 - 13228023
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaa 323  Q
    |||| |||||||| |  ||||||||||||||| ||||||||| ||||||||||||||    
T  13227967 aatctgattctcctcacttggctcttctcctaactttctcttggttttctcccaaaa 13228023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 42135 - 41961
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtct 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  42135 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaatttaaacaacttaataaaaatccagtctaaacagtct 42036  T
Q  117 tcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||| | ||| |||||||||||||||    
T  42035 tcaacataaaagtcataataaattacgtaacttatggaaaacaataaagatccccatcccgttacgtatcagagc 41961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 21942 - 21982
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  21942 ttggctcttctcctagctttctcttggtttttctcccaaaa 21982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 145001 - 145118
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtct 116  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  145001 aattaaatctcaatgcagtggaaattatcttaataaaacatcatgttggcacaacggccgcaacttaaacaacttaataaaaattcagtctaaacagtct 145100  T
Q  117 tcaacataaaagttataa 134  Q
    ||||||||||||| ||||    
T  145101 tcaacataaaagtcataa 145118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 147670 - 147759
Alignment:
Q  240 cttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  147670 cttagttttgatgaacaaactcttacacaatcagattctccccctttggctcttctcctagctttctcttgttttctcccaaaacctctg 147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 145314 - 145394
Alignment:
Q  161 taaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||||||||| | ||| |||||||||||||||||||||||||||| || || |||||||||||| |||||||||||||||||    
T  145314 taaagatccccatcccgttacgtatcagagcacctaagactcatatgtaccgcaactaacagcaactactctgcatcacct 145394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 8635 - 8730
Alignment:
Q  5 tcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaat 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  8635 tcataatatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggtctcaacttaaacaacttaataaaaat 8730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 8742 - 8797
Alignment:
Q  186 cagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8742 cagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 8797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 94720 - 94892
Alignment:
Q  19 ttaaatctcaatgcagcggaaaat-atcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtct 116  Q
    |||||||||||||||||||||||  || | ||| ||||||| ||||| ||||||| |||||||||||||||||| || ||||||||||||| || | |||    
T  94720 ttaaatctcaatgcagcggaaaaacatttaaattaaacatcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtctagacaaatct 94818  T
Q  117 tcaacataaaagttataataaatcacgtaacatatggaaaac-attaaagatcctcgtcctgttacgtatcagagc 191  Q
    ||||||||||| | ||||||||| | |||||| ||||||||| | |||||||||   ||| |||||||||||||||    
T  94819 tcaacataaaa-tcataataaat-atgtaacacatggaaaacaagtaaagatcccaatcccgttacgtatcagagc 94892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 4316 - 4424
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||||||||||||||||||||| || |||||||||| ||||| | ||||    
T  4316 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacgacctcaacttaaacaactt-attaaaatccagtttaaacaattctt 4414  T
Q  118 caacataaaa 127  Q
    ||||||||||    
T  4415 caacataaaa 4424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 16886 - 17024
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| ||||||| ||||||||| |||||||| || |||||| ||| ||||| | ||||    
T  16886 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacggcctcaactttaacaactt-attaaaatcaagtttaaacaaatctt 16984  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||| | ||||||||| |||||||||||||||||||    
T  16985 caacataaaa-tcataataaat-acgtaacatatggaaaaca 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 1602 - 1430
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| |  | | |  |||||| ||||| ||||||| ||||||||||||||||||| ||||||| |||| ||||| | |     
T  1602 aattaaatctcattgcagcggaaaacaattaagttcaacatcctgttggcacaacggcctcaacttaaacaacttattaaaaattcagtttaaacaaata 1503  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||| | ||||||||| |||||||| ||||||||||  ||| |||| | ||| |||||||||||||||    
T  1502 ttcaacataaaa-tcataataaat-acgtaacacatggaaaacagcaaa-atccccatcccgttacgtatcagagc 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 69432 - 69337
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  69432 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaaca 69337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 79224 - 79083
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||||||||| ||||||||||||||| |||||||| | ||||| |  |    
T  79224 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacgacctcagcttaaacaacttaattaaaatccaatttaaacaaaac 79125  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  79124 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 79083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 48355 - 48247
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||| ||||| || | |||  ||| |||||||| ||||||| ||||||||||||||||||| | ||||||||||||| || | ||||    
T  48355 ttaaatctcaatgcagcagaaaacatttaaattcaacttcatgttggcacaacggcctcaacttaaacaacttatttaaaatccagtctagacaaatctt 48256  T
Q  118 caacataaa 126  Q
    |||||||||    
T  48255 caacataaa 48247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 27728 - 27818
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtcta 108  Q
    |||||||||||||||||||||||||||| | ||| ||||||| ||||| ||| ||| ||| | ||||||||||||||| |||||||||||||    
T  27728 aattaaatctcaatgcagcggaaaatatttaaattaaacatcgtgttggcacgacggccttagcttaaacaacttaat-aaaatccagtcta 27818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 52280 - 52337
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||||||  |||||||||||||||||||||| |||  |||||||||||||    
T  52280 aatcagattctcccctcttggctcttctcctagctttctattggtttttctcccaaaa 52337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 10638 - 10498
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| | ||||||||||||||||||| |||||||||| ||||| |  |    
T  10638 aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggc-tcaacttaaacaacttaattaaaatccagtttaaacaaaac 10540  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  10539 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 4167 - 3995
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||| | ||||| |  |    
T  4167 aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccaatttaaacaaaac 4068  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||| | || |||||| || ||||| ||||||||||   || |||||| ||| |||||||||||||||    
T  4067 ttcaacataaaa-tcatgataaat-acataacacatggaaaacaagcaa-atcctcatcccgttacgtatcagagc 3995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 396942 - 397082
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaa-taaaaatccagtctaaac-agtct 116  Q
    ||||||||||||||| ||||||| || | |||  |||||| ||||| ||||| | ||| |||||||||||||||| |||||||||||| ||||| | |||    
T  396942 ttaaatctcaatgcatcggaaaacatttaaattcaacatcgtgttggcacaatggcctaaacttaaacaacttaattaaaaatccagtttaaacaaatct 397041  T
Q  117 tcaacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    ||||||||||| | || |||||| |||||||| ||||||||||    
T  397042 tcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 397082  T

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Target: scaffold1243 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 1028 - 923
Alignment:
Q  53 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 151  Q
    |||||||||||| |||||||  |||||||||||||||||| |||||||||||| ||  | | ||||||||||||||| |||||| ||| |||||||| ||    
T  1028 aacatcatgttggcacaacggtctcaacttaaacaacttattaaaaatccagtttacgcaaatcttcaacataaaag-tataatcaat-acgtaacacat 931  T
Q  152 ggaaaaca 159  Q
    ||||||||    
T  930 ggaaaaca 923  T

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Target: scaffold0375 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 10247 - 10152
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 112  Q
    |||||||||||| || ||||||||| | || | |  |||||||||||| |||||   |||||||||||||||||||||||||||||||| ||||||    
T  10247 aattaaatctcattgtagcggaaaacaactaagttcaacatcatgttggcacaatagcctcaacttaaacaacttaataaaaatccagtttaaaca 10152  T

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Target: scaffold1600 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 1479 - 1585
Alignment:
Q  53 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa--cagtcttcaacataaaagttataataaatcacgtaacata 150  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||||   | |||||||||||||| | || |||||| |||||||| |    
T  1479 aacatcgtgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaaacaaatcttcaacataaaa-tcatgataaat-acgtaacaca 1576  T
Q  151 tggaaaaca 159  Q
    |||||||||    
T  1577 tggaaaaca 1585  T

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Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 7449 - 7587
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| || | |||  ||| ||||||||  ||||||  ||||||||||||||||| || |||||| ||| ||||| | ||||    
T  7449 ttaaatctcaatgcagcggaaaacatttaaattcaacgtcatgttggtacaacggtctcaacttaaacaactt-attaaaatctagtttaaacaaatctt 7547  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||||||| | ||||||||| ||||| || ||||||||||    
T  7548 caacataaaa-tcataataaat-acgtagcacatggaaaaca 7587  T

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Target: scaffold0413 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 11735 - 11791
Alignment:
Q  269 atcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  11735 atcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 11791  T

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Target: scaffold0071 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 52077 - 52133
Alignment:
Q  269 atcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  52077 atcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaa 52133  T

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Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 9749 - 9793
Alignment:
Q  285 ttggctcttctcctagctttctcttgttttctcccaaaatctctg 329  Q
    |||||||||||||||| |||||||||||||||||||||| |||||    
T  9749 ttggctcttctcctagatttctcttgttttctcccaaaacctctg 9793  T

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Target: scaffold0462 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 5102 - 5169
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 84  Q
    ||||||||||||||||||||||||| | || | |  |||||||||||| ||||||| |||||||||||    
T  5102 aattaaatctcaatgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaa 5169  T

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Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 17466 - 17602
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    ||||||||||||||||||||||| |  ||||| ||||| | |  || ||||||| ||||||||||||| |||| || ||||||||||||| || | ||||    
T  17466 ttaaatctcaatgcagcggaaaaca--ttaattaaacaacgtaatggcacaacggcctcaacttaaacgactt-attaaaatccagtctagacaaatctt 17562  T
Q  118 caacataaaagttataataaatcacgtaacatatggaaaaca 159  Q
    |||||| ||| | ||||||||| | |||||| ||||||||||    
T  17563 caacat-aaattcataataaat-atgtaacacatggaaaaca 17602  T

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Target: scaffold0124 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 35414 - 35357
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||| |||||||| || ||||||||||||||||||||||||||  |||||||||||||    
T  35414 aatctgattctcctcccttggctcttctcctagctttctcttggtttttctcccaaaa 35357  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 385251 - 385285
Alignment:
Q  285 ttggctcttctcctagctttctcttgttttctccc 319  Q
    |||||||||||||||||||||||||||||||||||    
T  385251 ttggctcttctcctagctttctcttgttttctccc 385285  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 330376 - 330287
Alignment:
Q  19 ttaaatctcaa-tgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtcta 108  Q
    ||||||||||| |||||||||||| || | |||  |||||| ||||| ||||| | |||||| ||||||||||| || |||||||||||||    
T  330376 ttaaatctcaaatgcagcggaaaacatttaaattcaacatcgtgttggcacaatggcctcaatttaaacaactt-attaaaatccagtcta 330287  T

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Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 108665 - 108742
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 98  Q
    |||||||||| |||||||||||| ||  |||| ||||||| |  || ||||||||||||||| |||| |||||| |||||    
T  108665 ttaaatctcattgcagcggaaaacat--taattaaacatcgtaatggcacaacgacctcaacataaataacttattaaaa 108742  T

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Target: scaffold0589 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 2788 - 2959
Alignment:
Q  17 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 115  Q
    |||||||| ||||||||||||||||  | | |||  ||| || | ||| || |||  |||||||||||||||||| || |||||||||| ||||| | ||    
T  2788 aattaaatttcaatgcagcggaaaacttttaaattcaacttcgtattggcataaccgcctcaacttaaacaactt-attaaaatccagtttaaacaaatc 2886  T
Q  116 ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||||||| | |||||||||   |||||| ||||||||||    | |||| | |||||||||||||||||||    
T  2887 ttcaacataaaa-tcataataaat--agtaacacatggaaaacaaacgaaatccccatcctgttacgtatcagagc 2959  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 69065 - 69121
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaa 323  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||    
T  69065 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 69121  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 128020 - 127913
Alignment:
Q  19 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 117  Q
    |||||||||||||||||| |||| || | | | ||||||| |  || ||||||| |||||||||||||||||| || ||||| ||||||| || | ||||    
T  128020 ttaaatctcaatgcagcgaaaaacatttaatttaaacatcgtaatggcacaacggcctcaacttaaacaactt-attaaaattcagtctagacaaatctt 127922  T
Q  118 caacataaa 126  Q
    |||||||||    
T  127921 caacataaa 127913  T

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Target: scaffold0607 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 3870 - 3927
Alignment:
Q  268 aatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||| |||||||| |  ||||||||||||||||||||||||||  |||||||||||||    
T  3870 aatctgattctcctcacttggctcttctcctagctttctcttggtttttctcccaaaa 3927  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 16856 - 16906
Alignment:
Q  141 acgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 191  Q
    |||||||| |||||||||| | ||||||||| ||| |||||||||||||||    
T  16856 acgtaacacatggaaaacaatcaagatcctcatcccgttacgtatcagagc 16906  T

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Target: scaffold0381 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 14562 - 14529
Alignment:
Q  208 aacagcaactaacagctactactctgcatcacct 241  Q
    ||||||||||| ||||||||||||||||||||||    
T  14562 aacagcaactatcagctactactctgcatcacct 14529  T

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Target: scaffold0331 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 4801 - 4841
Alignment:
Q  285 ttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  4801 ttggctcttctcctagctttctcttggtttttctcccaaaa 4841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 613 - 535
Alignment:
Q  247 ttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||| |||| ||| |||| |||||| |||  |||||||||||| |||||||||||||  |||||||||||||    
T  613 ttgatgaacaaaactct-acagaatctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaa 535  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 2172 - 2250
Alignment:
Q  247 ttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||| |||| ||| |||| |||||| |||  |||||||||||| |||||||||||||  |||||||||||||    
T  2172 ttgatgaacaaagctct-acagaatctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaa 2250  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 25518 - 25440
Alignment:
Q  247 ttgatgaacaaa-ctcttacacaatcagattctccccctttggctcttctcctagctttctcttg--ttttctcccaaaa 323  Q
    |||||||||||| |||| ||| |||| |||||| |||  |||||||||||| |||||||||||||  |||||||||||||    
T  25518 ttgatgaacaaaactct-acagaatctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaa 25440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 171384 - 171293
Alignment:
Q  19 ttaaatctcaa-tgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 110  Q
    ||||||||||| | |||||||||| || | |||  ||||| |||||| ||||| | |||||| ||||||||||| || |||||||||||||||    
T  171384 ttaaatctcaaatacagcggaaaacatttaaattcaacattatgttggcacaatggcctcaaattaaacaactt-attaaaatccagtctaaa 171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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