View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8988_low_17 (Length: 237)
Name: NF8988_low_17
Description: NF8988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8988_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 44768676 - 44768893
Alignment:
| Q |
6 |
aaatataactgaacccaagtccttgggagaaatacacttcaagttttcaagccactatcggatcaaccaacgcgggtttagaagttagttagtaattgaa |
105 |
Q |
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| T |
44768676 |
aaatataactgaacccaagtccttgggagaaatacacttcaagttttcaagccactatcggatcaaccaacgcgggtttagaagttagttagtaattgaa |
44768775 |
T |
|
| Q |
106 |
aaatacttagaagttagttagtataaagttcattaaagaagattatgtacaaagtacatatcgtctatcaatgtgaaatgttttaagcaattttcttccc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44768776 |
aaatacttagaagttagttagtataaagttcattaaagaagattatgtacaaagtacatatcgtctatcaatgtgaaatgttttaagcaattttcttccc |
44768875 |
T |
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| Q |
206 |
tatcaagctctcagactt |
223 |
Q |
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|||||||||||||||||| |
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| T |
44768876 |
tatcaagctctcagactt |
44768893 |
T |
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