View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8991_low_32 (Length: 471)

Name: NF8991_low_32
Description: NF8991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8991_low_32
NF8991_low_32
[»] scaffold0105 (3 HSPs)
scaffold0105 (7-177)||(18630-18800)
scaffold0105 (379-437)||(19746-19804)
scaffold0105 (276-317)||(18865-18906)
[»] chr4 (4 HSPs)
chr4 (7-177)||(8192055-8192225)
chr4 (32-148)||(54420991-54421107)
chr4 (379-437)||(8193090-8193148)
chr4 (276-317)||(8192290-8192331)
[»] chr2 (2 HSPs)
chr2 (7-140)||(9795526-9795658)
chr2 (8-116)||(35917818-35917925)
[»] chr3 (5 HSPs)
chr3 (6-134)||(4179204-4179332)
chr3 (8-134)||(4172877-4173003)
chr3 (8-117)||(46589860-46589970)
chr3 (8-148)||(30694644-30694784)
chr3 (27-136)||(45731497-45731606)
[»] chr8 (2 HSPs)
chr8 (7-146)||(14139396-14139535)
chr8 (8-116)||(40147425-40147533)
[»] chr6 (2 HSPs)
chr6 (7-121)||(19403290-19403404)
chr6 (26-148)||(15107724-15107846)
[»] scaffold0740 (1 HSPs)
scaffold0740 (17-126)||(2728-2837)
[»] chr1 (1 HSPs)
chr1 (17-148)||(27024276-27024407)
[»] scaffold1619 (1 HSPs)
scaffold1619 (19-140)||(670-791)
[»] chr7 (3 HSPs)
chr7 (7-148)||(48260707-48260848)
chr7 (32-126)||(37381511-37381605)
chr7 (19-117)||(42694732-42694830)
[»] chr5 (1 HSPs)
chr5 (32-117)||(11140973-11141058)
[»] scaffold0057 (1 HSPs)
scaffold0057 (46-113)||(60652-60719)


Alignment Details
Target: scaffold0105 (Bit Score: 135; Significance: 4e-70; HSPs: 3)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 7 - 177
Target Start/End: Original strand, 18630 - 18800
Alignment:
Q  7 ggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  18630 ggagaaacaaagaggccgacaaaattacaataaaaagtaaagtttctaatgataatattatcatctggatcagttaaattatcaacaattttaaagatgc 18729  T
Q  107 aactttaatattgtatcacgaagtaagcgtacacataaaaaattgatcctaactgcaatggctgctaattt 177  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18730 aactttaatatcgtaacacgaagtaagcgtacacataaaaaattgatcctaactgcaagggctgctaattt 18800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 19746 - 19804
Alignment:
Q  379 cttctatgagaaaaagaaccgctacggcagttgaagctttataaaaaatgttttagtca 437  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  19746 cttctatgagaaaaagaaccgctagggtggttgaagctttataaaaaatgttttagtca 19804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 18865 - 18906
Alignment:
Q  276 aacttttgcgtagtaacagaaagtaaaaataataataataat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18865 aacttttgcgtagtaacagaaagtaaaaataataataataat 18906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 4e-70; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 7 - 177
Target Start/End: Original strand, 8192055 - 8192225
Alignment:
Q  7 ggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  8192055 ggagaaacaaagaggccgacaaaattacaataaaaagtaaagtttctaatgataatattatcatctggatcagttaaattatcaacaattttaaagatgc 8192154  T
Q  107 aactttaatattgtatcacgaagtaagcgtacacataaaaaattgatcctaactgcaatggctgctaattt 177  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8192155 aactttaatatcgtaacacgaagtaagcgtacacataaaaaattgatcctaactgcaagggctgctaattt 8192225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 54421107 - 54420991
Alignment:
Q  32 tacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatattgtatcacgaagta 131  Q
    ||||| ||||||| ||||||||||||| ||||||||||| || ||||||| |||| || ||||||||||||||||||||||||||| ||| |||| |||     
T  54421107 tacaggaaaaagtgaagtttctaatgaaaaaattatcatctgaatcagtcgaattgtctacaattttaaagatgcaactttaatatcgtaacacgtagtt 54421008  T
Q  132 agcgtacacataaaaaa 148  Q
    | |||||||| ||||||    
T  54421007 aacgtacacaaaaaaaa 54420991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 8193090 - 8193148
Alignment:
Q  379 cttctatgagaaaaagaaccgctacggcagttgaagctttataaaaaatgttttagtca 437  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  8193090 cttctatgagaaaaagaaccgctagggtggttgaagctttataaaaaatgttttagtca 8193148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 8192290 - 8192331
Alignment:
Q  276 aacttttgcgtagtaacagaaagtaaaaataataataataat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8192290 aacttttgcgtagtaacagaaagtaaaaataataataataat 8192331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 9795658 - 9795526
Alignment:
Q  7 ggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    |||||| || |||||||| |||||||| || ||||||| ||||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||    
T  9795658 ggagaaacaaagaggccggcaaaattatag-aaaaagtgaagtttctaatgataaaattatcatctagattagtcaaattatctacaattttaaagatgc 9795560  T
Q  107 aactttaatattgtatcacgaagtaagcgtacac 140  Q
    ||||||||||| |||| ||| |||||||||||||    
T  9795559 aactttaatatcgtataacgtagtaagcgtacac 9795526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 35917818 - 35917925
Alignment:
Q  8 gagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgca 107  Q
    ||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||||||| |||||    
T  35917818 gagaaacaaagaggccgacaaa-ttacactaaaaagtaaagtttctaatgataaaattatcatttgaatcatttaaattatcaataattttaaaaatgca 35917916  T
Q  108 actttaata 116  Q
    |||||||||    
T  35917917 actttaata 35917925  T

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Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 4179332 - 4179204
Alignment:
Q  6 tggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatg 105  Q
    ||||||| || |||||||  |||||||| || ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||     
T  4179332 tggagaaacaaagaggccagcaaaattaaaggaaaaagtgaagtttctaatgataaaattatcatctggatcagtcaaattatctacaattttaaagata 4179233  T
Q  106 caactttaatattgtatcacgaagtaagc 134  Q
    |||||||||||| |||  ||| |||||||    
T  4179232 caactttaatatcgtaaaacgtagtaagc 4179204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 4173003 - 4172877
Alignment:
Q  8 gagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgca 107  Q
    ||||| || |||||||| |||||||| || ||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||    
T  4173003 gagaaacaaagaggccggcaaaattaaaggaaaaagtgaagtttctaatgataaaattatcatctgaatcagtcaaattatctacaattttaaagataca 4172904  T
Q  108 actttaatattgtatcacgaagtaagc 134  Q
    |||||||||| |||  ||| |||||||    
T  4172903 actttaatatcgtaaaacgtagtaagc 4172877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 46589860 - 46589970
Alignment:
Q  8 gagaagcagagaggccgacaaaattacagtaaaaa-gtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    ||||| || ||||||||||||| |||||| ||||| || ||||||||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  46589860 gagaaacaaagaggccgacaaatttacagaaaaaaagtgaagtttctaataataaaattatcatctagatcagtcaaattatctacaattttaaagatgc 46589959  T
Q  107 aactttaatat 117  Q
    |||||||||||    
T  46589960 aactttaatat 46589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 30694644 - 30694784
Alignment:
Q  8 gagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgca 107  Q
    ||||| || ||||| ||||||||||||||  ||||   ||||||||||||||||||||||||| | ||||| ||||||||||  ||||||||||||||||    
T  30694644 gagaaacaaagaggtcgacaaaattacagagaaaaacgaagtttctaatgataaaattatcatctagatcaatcaaattatctccaattttaaagatgca 30694743  T
Q  108 actttaatattgtatcacgaagtaagcgtacacataaaaaa 148  Q
    |||||||||| |||  ||| ||||| |||||||| ||||||    
T  30694744 actttaatatcgtaaaacgtagtaaacgtacacaaaaaaaa 30694784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 45731497 - 45731606
Alignment:
Q  27 aaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatattgtatcacg 126  Q
    |||||||||  || |||| ||||||||||| || ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||  |||    
T  45731497 aaaattacacgaacaagtgaagtttctaataattaaattatcatttgaattagtcaaattatcaacaattttaaagatgcaactttaatatcgtaatacg 45731596  T
Q  127 aagtaagcgt 136  Q
     |||||||||    
T  45731597 tagtaagcgt 45731606  T

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Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 14139535 - 14139396
Alignment:
Q  7 ggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    |||||| || ||||||||||||||||||| |||||||| ||| || ||||||||||||||||||  | |||||| ||||| |||||||||||||||||||    
T  14139535 ggagaaacaaagaggccgacaaaattacactaaaaagtgaagcttttaatgataaaattatcatacgaatcagttaaattgtcaacaattttaaagatgc 14139436  T
Q  107 aactttaatattgtatcacgaagtaagcgtacacataaaa 146  Q
    | ||||||||| ||| ||  ||||||||||||||| ||||    
T  14139435 atctttaatatcgtaacattaagtaagcgtacacaaaaaa 14139396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 40147425 - 40147533
Alignment:
Q  8 gagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgca 107  Q
    ||||| || |||||| |||||||||||| |||||| | ||||||||||||||||||||||||  || |||| | |||||||||||||||||||| |||||    
T  40147425 gagaaacaaagaggcagacaaaattacactaaaaaatgaagtttctaatgataaaattatcacctgaatcatttaaattatcaacaattttaaaaatgca 40147524  T
Q  108 actttaata 116  Q
    |||||||||    
T  40147525 actttaata 40147533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 19403404 - 19403290
Alignment:
Q  7 ggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    |||||| || |||||||||||||||||||| ||||||| || ||||||||||  |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  19403404 ggagaaacaaagaggccgacaaaattacaggaaaaagtgaaatttctaatgaataaattaccatctgaatcagtcaaattatctacaattttaaagatgc 19403305  T
Q  107 aactttaatattgta 121  Q
    |||||||||||||||    
T  19403304 aactttaatattgta 19403290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 15107724 - 15107846
Alignment:
Q  26 caaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatattgtatcac 125  Q
    ||||||||| | ||||||| ||||||||||||| ||| ||||||| | |||||||||||||||| ||||||||||||||||||||||| ||| ||| |||    
T  15107724 caaaattactggaaaaagtgaagtttctaatgaaaaagttatcatctagatcagtcaaattatctacaattttaaagatgcaactttactatcgtaacac 15107823  T
Q  126 gaagtaagcgtacacataaaaaa 148  Q
    | ||| | |||||||| ||||||    
T  15107824 gtagttaacgtacacaaaaaaaa 15107846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 2728 - 2837
Alignment:
Q  17 agaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaata 116  Q
    |||||||  |||||||||| |||||||| |||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  2728 agaggcctgcaaaattacattaaaaagtgaagtttgtaatgataaaattataatttggatcaatcaaattatcaaaaattttaaagatgcaactttaata 2827  T
Q  117 ttgtatcacg 126  Q
    | ||| ||||    
T  2828 tcgtaacacg 2837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 27024276 - 27024407
Alignment:
Q  17 agaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaata 116  Q
    |||||||||| |||||| || |||| || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||    
T  27024276 agaggccgaccaaattatagaaaaaggtgaagtttctaatgataaaattatcatcaggatcagtcaaattatctacaattttaaagatgaaactttaata 27024375  T
Q  117 ttgtatcacgaagtaagcgtacacataaaaaa 148  Q
    | |||  ||| || |||| |||||| ||||||    
T  27024376 tcgtaaaacgtagcaagcatacacaaaaaaaa 27024407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1619 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 670 - 791
Alignment:
Q  19 aggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatatt 118  Q
    |||||||||||||||||  ||||||| ||||||||||||| ||||||||||| | |||||||||||||||| |||||||| || || ||||||||||||     
T  670 aggccgacaaaattacatgaaaaagtgaagtttctaatgaaaaaattatcatctcgatcagtcaaattatctacaattttgaatatacaactttaatatc 769  T
Q  119 gtatcacgaagtaagcgtacac 140  Q
    ||| |||| ||| |||||||||    
T  770 gtaacacgtagttagcgtacac 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 48260848 - 48260707
Alignment:
Q  7 ggagaagcagagaggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgc 106  Q
    |||||| || |||| ||| ||||||||||| ||||| | |||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||| |    
T  48260848 ggagaaacaaagagaccggcaaaattacaggaaaaaatgaagtttttaatgataaaattatcatccggatcagtcaaattatctacaattttaaagatac 48260749  T
Q  107 aactttaatattgtatcacgaagtaagcgtacacataaaaaa 148  Q
    ||||||||||| |||  ||  |||||||||||| | ||||||    
T  48260748 aactttaatatcgtaaaacatagtaagcgtacaaaaaaaaaa 48260707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 37381605 - 37381511
Alignment:
Q  32 tacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatattgtatcacg 126  Q
    ||||| ||||||| ||||||||||||| ||||||||||| | |||||||||| ||||| |||||||||||||| |||||||||||| ||| ||||    
T  37381605 tacaggaaaaagtgaagtttctaatgaaaaaattatcatctagatcagtcaagttatctacaattttaaagatacaactttaatatcgtaacacg 37381511  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 42694732 - 42694830
Alignment:
Q  19 aggccgacaaaattacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatat 117  Q
    |||| ||||||||||||  ||||||| |||||| ||||||||| ||||| || || |||||| |||||||||| |||||||||||| ||| ||||||||    
T  42694732 aggctgacaaaattacatcaaaaagtgaagtttataatgataagattataatctgaatcagttaaattatcaataattttaaagatccaattttaatat 42694830  T

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Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 11141058 - 11140973
Alignment:
Q  32 tacagtaaaaagtaaagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaactttaatat 117  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  11141058 tacaggaaaaagtgaagtttctaatgaaaaaattatcatttggatcagtaaaattatctacaattttaaagatgcaactttaatat 11140973  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 60719 - 60652
Alignment:
Q  46 aagtttctaatgataaaattatcatttggatcagtcaaattatcaacaattttaaagatgcaacttta 113  Q
    ||||||||||||| |||||||||||   ||| |||||||||||| |||||||| || |||||||||||    
T  60719 aagtttctaatgaaaaaattatcatcccgattagtcaaattatctacaattttgaatatgcaacttta 60652  T

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