View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8991_low_54 (Length: 324)
Name: NF8991_low_54
Description: NF8991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8991_low_54 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 11 - 324
Target Start/End: Original strand, 36525797 - 36526126
Alignment:
| Q |
11 |
cagagaaactgaaaaacaagccacttcgttaggctagccaaggcaaggtgaaagtgagtcaagtttttagatattattttgaaattcatctcattatact |
110 |
Q |
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| T |
36525797 |
cagagaaactgaaaaacaagccacttcgttaggctagccaaggcaaggtgaaagtgagtcaagtttttagatattattttgaaattcatctcattatact |
36525896 |
T |
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| Q |
111 |
atatattttaatattgaaatccaaagaatacgtttttatttgtatattattaataaaacaatgaaattgtggtatgtactttaatgtgcaaagtaaaaca |
210 |
Q |
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| T |
36525897 |
atatattttaatattgaaatccaaagaatacgtttttatttgtatattattaataaaacaatgaaattgtggtatgtactttaatgtgcaaagtaaaaca |
36525996 |
T |
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| Q |
211 |
caagtaaaacaat--at--------------taaaattgagtaaaacacatgatattcatgtagaataaaaaatcaattgttaagataccaattaaggtg |
294 |
Q |
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| T |
36525997 |
caagtaaaacaattcattgtgggcatagttatacaattgtgtaaaacacatgatattcatgtagaataaaaaatcaattgttaagataccaattaaggtg |
36526096 |
T |
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| Q |
295 |
aatcaaaggaaagcaattcttaccaacaat |
324 |
Q |
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| T |
36526097 |
aatcaaaggaaagcaattcttaccaacaat |
36526126 |
T |
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