View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8992_low_10 (Length: 379)
Name: NF8992_low_10
Description: NF8992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8992_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 8 - 364
Target Start/End: Complemental strand, 10581881 - 10581525
Alignment:
| Q |
8 |
tgagatacacatacttactttacatgtataaagcttattttgaatcacttatcatgagcctggttctagtcaagtgaagatatctattagaaaaccagtt |
107 |
Q |
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| T |
10581881 |
tgagatacacatacttactttacatgtataaagcttaatttgaatcacttatcatgagcctggttctagtcaagtgaagatatctattagaaaaccagtt |
10581782 |
T |
|
| Q |
108 |
caattaattgtatggttagaagccagtattagtccctttcttttagaggttactaatatggaaactttatattgcagagatttttgaatcaatgtcagag |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10581781 |
caattaattgtatggttagaagccagtattagtccctttcttttagaggttactaatatggaaactttatattgcagagatttttgaatcaatgtcagag |
10581682 |
T |
|
| Q |
208 |
aaatggggccatgttgatgttggtattctagtttgtggtcctccaactcttcagtcaagtgttgcacaagaaatcaggtcacatagtttaacaagacaac |
307 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10581681 |
aaatggggccatgttgatgtaggtattctagtttgtggtcctccaactcttcagtcaagtgttgcacaagaaatcaggtcacatagtttaacaagacaac |
10581582 |
T |
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| Q |
308 |
cttatcaccccatcttccatttccacagtcatagctttgatctctagcttccttcct |
364 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10581581 |
cttatcaccccatcttccatttccacagtcatagctttgatctctagcttccttcct |
10581525 |
T |
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