View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8992_low_23 (Length: 211)
Name: NF8992_low_23
Description: NF8992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8992_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 10750469 - 10750283
Alignment:
| Q |
1 |
cgttttgccctttgccgctactcctcctctcgaggctccaacaactctttcttgcaccacaagaaggtctcatatgacggcactgccactgaaaacggtg |
100 |
Q |
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| T |
10750469 |
cgttttgccctttgccgctactcctcctctcgaggctccaacaactctttcttgcaccacaagaaggtctcatatgacggcactgccactgaaaacggtg |
10750370 |
T |
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| Q |
101 |
atgatcaccatctggtgatcatcaacgacagtggcagtgtggtcagtgatgaggaagagaaagggttgtttgacgagtattattatg |
187 |
Q |
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|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10750369 |
atgatcaccatctgatgatcgtcaacgacagtggcagtgtggtcagtgatgaggaagagaaagggttgtttgacgagtattattatg |
10750283 |
T |
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