View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8995_low_14 (Length: 615)

Name: NF8995_low_14
Description: NF8995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8995_low_14
NF8995_low_14
[»] chr6 (49 HSPs)
chr6 (1-332)||(33041473-33041789)
chr6 (96-285)||(33235996-33236192)
chr6 (97-332)||(9719034-9719271)
chr6 (96-333)||(30487308-30487547)
chr6 (99-336)||(19278039-19278282)
chr6 (91-284)||(1390365-1390566)
chr6 (96-332)||(9721140-9721378)
chr6 (97-270)||(5585304-5585486)
chr6 (96-332)||(14515476-14515713)
chr6 (141-333)||(4097559-4097755)
chr6 (96-211)||(10818343-10818458)
chr6 (91-268)||(34176397-34176581)
chr6 (139-333)||(21606889-21607086)
chr6 (143-333)||(31849112-31849305)
chr6 (96-295)||(1300654-1300862)
chr6 (146-273)||(10348850-10348986)
chr6 (96-295)||(16737998-16738205)
chr6 (218-290)||(2893670-2893742)
chr6 (140-284)||(2892650-2892801)
chr6 (396-479)||(33040656-33040739)
chr6 (218-332)||(12811112-12811221)
chr6 (167-272)||(13583777-13583890)
chr6 (139-210)||(2900038-2900109)
chr6 (218-289)||(6034204-6034275)
chr6 (97-292)||(26318343-26318546)
chr6 (96-293)||(665843-666054)
chr6 (140-274)||(1395691-1395834)
chr6 (258-332)||(9721141-9721210)
chr6 (96-165)||(10818231-10818300)
chr6 (236-309)||(9298636-9298709)
chr6 (243-332)||(10818232-10818316)
chr6 (139-198)||(9298625-9298685)
chr6 (97-165)||(19278211-19278278)
chr6 (140-332)||(30849960-30850153)
chr6 (141-293)||(2892890-2893053)
chr6 (218-273)||(14548738-14548793)
chr6 (143-193)||(7775996-7776046)
chr6 (258-332)||(9719034-9719103)
chr6 (96-165)||(14515475-14515544)
chr6 (179-261)||(25741476-25741566)
chr6 (253-295)||(1300787-1300829)
chr6 (258-296)||(10818388-10818426)
chr6 (102-167)||(23091129-23091195)
chr6 (139-188)||(31799070-31799120)
chr6 (97-162)||(21607020-21607085)
chr6 (97-165)||(4097686-4097754)
chr6 (259-295)||(21606879-21606915)
chr6 (96-136)||(23090997-23091037)
chr6 (292-332)||(23090998-23091038)
[»] chr3 (54 HSPs)
chr3 (91-332)||(41110318-41110562)
chr3 (96-296)||(24560251-24560459)
chr3 (115-301)||(25654991-25655187)
chr3 (91-333)||(18654597-18654843)
chr3 (139-301)||(220442-220612)
chr3 (114-279)||(52473966-52474139)
chr3 (139-288)||(30200133-30200293)
chr3 (139-295)||(37102194-37102358)
chr3 (139-329)||(21773788-21773981)
chr3 (91-289)||(41039947-41040153)
chr3 (113-295)||(46556178-46556369)
chr3 (100-296)||(27541937-27542141)
chr3 (145-299)||(9312522-9312687)
chr3 (96-255)||(36568906-36569072)
chr3 (96-256)||(16275707-16275875)
chr3 (151-296)||(2387817-2387970)
chr3 (97-199)||(28581189-28581291)
chr3 (98-279)||(37807131-37807321)
chr3 (220-290)||(651771-651841)
chr3 (98-273)||(10748299-10748484)
chr3 (218-285)||(46204931-46204998)
chr3 (218-284)||(14898022-14898088)
chr3 (218-296)||(28582641-28582719)
chr3 (157-289)||(43005804-43005942)
chr3 (218-332)||(6803333-6803442)
chr3 (145-285)||(52185060-52185207)
chr3 (145-278)||(55327422-55327563)
chr3 (218-285)||(54574493-54574560)
chr3 (97-316)||(40463874-40464096)
chr3 (96-165)||(34641163-34641232)
chr3 (224-329)||(10943752-10943852)
chr3 (97-188)||(17474209-17474301)
chr3 (90-165)||(24253895-24253970)
chr3 (91-183)||(26135952-26136044)
chr3 (218-254)||(31684362-31684398)
chr3 (99-162)||(14897981-14898044)
chr3 (91-165)||(220570-220644)
chr3 (98-188)||(17474356-17474446)
chr3 (115-165)||(28582682-28582732)
chr3 (96-165)||(41110494-41110563)
chr3 (224-331)||(12790377-12790478)
chr3 (218-254)||(31894020-31894056)
chr3 (218-290)||(37236963-37237034)
chr3 (96-183)||(13082856-13082943)
chr3 (98-165)||(55428552-55428619)
chr3 (96-178)||(23028086-23028168)
chr3 (97-162)||(6803377-6803442)
chr3 (100-165)||(21773788-21773853)
chr3 (96-165)||(24560219-24560288)
chr3 (258-295)||(30200123-30200160)
chr3 (258-295)||(37102184-37102221)
chr3 (259-296)||(52474088-52474125)
chr3 (117-165)||(30200264-30200312)
chr3 (292-332)||(42772047-42772087)
[»] chr2 (52 HSPs)
chr2 (96-332)||(36347543-36347782)
chr2 (96-295)||(23748130-23748337)
chr2 (94-330)||(8426879-8427110)
chr2 (133-296)||(15224733-15224904)
chr2 (96-332)||(36046206-36046442)
chr2 (139-284)||(39732774-39732926)
chr2 (96-295)||(19566822-19567030)
chr2 (139-295)||(39821704-39821868)
chr2 (137-273)||(16565832-16565978)
chr2 (118-335)||(36566874-36567096)
chr2 (96-273)||(40022427-40022615)
chr2 (100-299)||(12541796-12541999)
chr2 (96-210)||(34209592-34209706)
chr2 (151-285)||(28262500-28262642)
chr2 (97-299)||(31795772-31795982)
chr2 (139-285)||(7681293-7681443)
chr2 (96-210)||(9631688-9631802)
chr2 (133-284)||(29525768-29525931)
chr2 (139-210)||(27926681-27926752)
chr2 (222-332)||(35736178-35736283)
chr2 (145-332)||(9426988-9427179)
chr2 (139-210)||(42316809-42316880)
chr2 (156-245)||(17379897-17379994)
chr2 (143-193)||(1583222-1583272)
chr2 (178-269)||(2241471-2241570)
chr2 (150-279)||(37739949-37740085)
chr2 (224-273)||(9591973-9592022)
chr2 (96-165)||(36347714-36347783)
chr2 (96-188)||(35736337-35736429)
chr2 (96-187)||(887261-887351)
chr2 (219-290)||(41841722-41841793)
chr2 (90-188)||(45257456-45257555)
chr2 (218-284)||(6721754-6721820)
chr2 (94-162)||(9426985-9427053)
chr2 (96-164)||(15224868-15224936)
chr2 (96-172)||(17380007-17380083)
chr2 (96-163)||(34187577-34187644)
chr2 (218-296)||(41778807-41778885)
chr2 (88-165)||(39732901-39732978)
chr2 (229-285)||(27926613-27926669)
chr2 (99-158)||(8427051-8427110)
chr2 (90-165)||(22356177-22356252)
chr2 (96-163)||(31061361-31061428)
chr2 (91-165)||(35736172-35736246)
chr2 (258-332)||(36046207-36046276)
chr2 (151-290)||(39354231-39354378)
chr2 (218-290)||(886958-887028)
chr2 (224-273)||(2381125-2381174)
chr2 (96-189)||(16713494-16713587)
chr2 (220-257)||(32503232-32503269)
chr2 (96-165)||(36046375-36046443)
chr2 (90-162)||(41841678-41841750)
[»] chr4 (54 HSPs)
chr4 (96-332)||(54935070-54935311)
chr4 (96-289)||(27735786-27735987)
chr4 (96-273)||(45741947-45742132)
chr4 (113-332)||(31348340-31348562)
chr4 (91-333)||(5730827-5731073)
chr4 (90-332)||(37711141-37711371)
chr4 (96-290)||(54320474-54320676)
chr4 (96-286)||(49735470-49735668)
chr4 (96-278)||(41174397-41174587)
chr4 (102-278)||(35248738-35248922)
chr4 (157-332)||(26166940-26167118)
chr4 (120-332)||(1968377-1968600)
chr4 (139-333)||(46007744-46007943)
chr4 (96-278)||(24565348-24565536)
chr4 (108-285)||(6891405-6891590)
chr4 (140-269)||(36151637-36151773)
chr4 (478-597)||(11960695-11960817)
chr4 (139-296)||(47433754-47433919)
chr4 (96-191)||(6938394-6938489)
chr4 (151-259)||(16400871-16400987)
chr4 (102-296)||(17938115-17938318)
chr4 (145-332)||(29798291-29798478)
chr4 (139-210)||(34110933-34111003)
chr4 (139-284)||(44784038-44784190)
chr4 (114-332)||(21694910-21695129)
chr4 (115-260)||(22659268-22659413)
chr4 (145-332)||(2247854-2248042)
chr4 (96-165)||(31348494-31348563)
chr4 (114-286)||(45132517-45132695)
chr4 (139-284)||(28332850-28333003)
chr4 (224-332)||(56135752-56135855)
chr4 (218-273)||(2917095-2917150)
chr4 (139-213)||(36278376-36278450)
chr4 (96-165)||(1968532-1968601)
chr4 (98-165)||(27735749-27735816)
chr4 (97-160)||(46007879-46007942)
chr4 (89-167)||(2247972-2248050)
chr4 (258-332)||(54935241-54935310)
chr4 (99-298)||(55510202-55510407)
chr4 (96-165)||(45132668-45132737)
chr4 (141-182)||(45911327-45911368)
chr4 (96-165)||(54576329-54576398)
chr4 (96-163)||(54935069-54935137)
chr4 (219-279)||(31719966-31720028)
chr4 (244-290)||(2247843-2247889)
chr4 (251-289)||(6938322-6938360)
chr4 (242-288)||(27735901-27735947)
chr4 (96-162)||(47433885-47433951)
chr4 (91-161)||(47846233-47846303)
chr4 (258-332)||(49735471-49735540)
chr4 (218-278)||(22921033-22921094)
chr4 (218-278)||(22970705-22970766)
chr4 (224-273)||(34995108-34995157)
chr4 (96-184)||(37761467-37761555)
[»] chr1 (53 HSPs)
chr1 (98-295)||(8529834-8530039)
chr1 (96-288)||(40094935-40095136)
chr1 (96-332)||(30010335-30010574)
chr1 (91-332)||(12234013-12234257)
chr1 (91-333)||(38509891-38510136)
chr1 (91-332)||(41498407-41498652)
chr1 (96-328)||(2858934-2859169)
chr1 (142-332)||(32951366-32951559)
chr1 (96-332)||(35349468-35349703)
chr1 (146-295)||(50744332-50744490)
chr1 (140-331)||(51597672-51597866)
chr1 (139-290)||(10391912-10392072)
chr1 (139-289)||(49946633-49946791)
chr1 (139-294)||(6563614-6563775)
chr1 (148-285)||(45585739-45585884)
chr1 (91-210)||(43551993-43552108)
chr1 (237-332)||(26324017-26324112)
chr1 (97-210)||(20576136-20576247)
chr1 (97-210)||(7444623-7444736)
chr1 (125-279)||(26940874-26941036)
chr1 (139-253)||(36285619-36285741)
chr1 (90-209)||(28770852-28770969)
chr1 (90-165)||(32951491-32951566)
chr1 (139-210)||(40964726-40964798)
chr1 (218-278)||(44211037-44211097)
chr1 (218-295)||(2470867-2470944)
chr1 (139-246)||(41676363-41676480)
chr1 (224-284)||(43553068-43553129)
chr1 (101-165)||(2859105-2859169)
chr1 (91-158)||(23536777-23536844)
chr1 (91-165)||(35349635-35349709)
chr1 (96-165)||(30010334-30010403)
chr1 (96-161)||(41498406-41498471)
chr1 (91-183)||(2470727-2470819)
chr1 (96-188)||(2506689-2506781)
chr1 (242-290)||(41676437-41676485)
chr1 (98-161)||(35512974-35513037)
chr1 (115-165)||(10391893-10391943)
chr1 (83-165)||(12233999-12234081)
chr1 (258-332)||(12234182-12234251)
chr1 (258-296)||(38509928-38509966)
chr1 (224-273)||(1085628-1085677)
chr1 (96-145)||(20607410-20607459)
chr1 (92-165)||(25268437-25268510)
chr1 (96-193)||(40709294-40709391)
chr1 (236-289)||(49946629-49946682)
chr1 (97-165)||(7444481-7444549)
chr1 (258-290)||(35349504-35349536)
chr1 (97-165)||(38510067-38510135)
chr1 (258-290)||(40094973-40095005)
chr1 (261-289)||(43552037-43552065)
chr1 (218-294)||(49832583-49832659)
chr1 (477-541)||(50135026-50135090)
[»] chr5 (59 HSPs)
chr5 (96-332)||(13634714-13634953)
chr5 (91-305)||(7544161-7544383)
chr5 (91-296)||(10650463-10650661)
chr5 (96-301)||(26414922-26415136)
chr5 (96-332)||(16938482-16938721)
chr5 (96-268)||(8502837-8503017)
chr5 (99-295)||(36363067-36363271)
chr5 (96-289)||(28279478-28279680)
chr5 (146-295)||(9856915-9857072)
chr5 (96-296)||(37606929-37607136)
chr5 (139-290)||(4373611-4373770)
chr5 (91-289)||(10476067-10476275)
chr5 (97-284)||(9798615-9798810)
chr5 (139-330)||(36392195-36392388)
chr5 (139-284)||(10072692-10072845)
chr5 (96-296)||(37779139-37779345)
chr5 (96-196)||(1657955-1658055)
chr5 (96-210)||(14245090-14245204)
chr5 (96-285)||(37551453-37551647)
chr5 (96-285)||(37654283-37654477)
chr5 (145-299)||(20146917-20147088)
chr5 (140-332)||(16501836-16502033)
chr5 (139-331)||(2550397-2550592)
chr5 (218-273)||(22022907-22022962)
chr5 (140-210)||(20513491-20513561)
chr5 (139-210)||(43535-43607)
chr5 (220-290)||(11756917-11756987)
chr5 (140-255)||(17024270-17024393)
chr5 (139-210)||(22023495-22023568)
chr5 (139-210)||(32727822-32727893)
chr5 (173-273)||(42681510-42681618)
chr5 (96-182)||(14245202-14245288)
chr5 (228-285)||(11419303-11419360)
chr5 (218-279)||(14681520-14681581)
chr5 (218-332)||(40815300-40815408)
chr5 (97-171)||(11757070-11757144)
chr5 (218-284)||(39966084-39966150)
chr5 (96-165)||(13634713-13634782)
chr5 (139-199)||(17780279-17780340)
chr5 (96-165)||(26414895-26414964)
chr5 (145-213)||(4423336-4423404)
chr5 (94-182)||(10650427-10650517)
chr5 (96-163)||(34980812-34980879)
chr5 (242-332)||(1657969-1658054)
chr5 (258-332)||(14245218-14245287)
chr5 (139-204)||(11419237-11419302)
chr5 (139-187)||(2556167-2556215)
chr5 (224-332)||(34980813-34980916)
chr5 (226-296)||(43410-43481)
chr5 (98-157)||(2550533-2550592)
chr5 (218-294)||(14684614-14684692)
chr5 (139-210)||(29002251-29002322)
chr5 (294-332)||(8551621-8551659)
chr5 (96-158)||(10476028-10476090)
chr5 (292-334)||(12600703-12600745)
chr5 (91-161)||(33744190-33744260)
chr5 (96-162)||(40815299-40815365)
chr5 (96-165)||(16938481-16938550)
chr5 (220-300)||(13298296-13298376)
[»] chr8 (50 HSPs)
chr8 (100-296)||(31543078-31543282)
chr8 (102-301)||(11575415-11575621)
chr8 (97-290)||(16652989-16653190)
chr8 (96-295)||(11785561-11785768)
chr8 (140-289)||(1281184-1281341)
chr8 (96-316)||(31738442-31738665)
chr8 (139-305)||(1026894-1027067)
chr8 (139-299)||(7502999-7503167)
chr8 (98-332)||(30479721-30479958)
chr8 (90-285)||(3726859-3727054)
chr8 (139-293)||(29358385-29358547)
chr8 (133-284)||(30664407-30664566)
chr8 (138-296)||(7979174-7979340)
chr8 (96-204)||(34634277-34634385)
chr8 (100-296)||(36308876-36309081)
chr8 (145-273)||(6315119-6315255)
chr8 (139-288)||(37923123-37923280)
chr8 (97-292)||(11033455-11033659)
chr8 (145-332)||(9718530-9718720)
chr8 (156-290)||(37032419-37032561)
chr8 (124-332)||(2248455-2248666)
chr8 (96-289)||(41103506-41103709)
chr8 (146-280)||(28083792-28083934)
chr8 (97-210)||(29690925-29691038)
chr8 (96-285)||(40990183-40990383)
chr8 (218-290)||(42650468-42650540)
chr8 (139-332)||(4247563-4247761)
chr8 (96-165)||(43732860-43732929)
chr8 (114-201)||(10028259-10028347)
chr8 (178-290)||(33922560-33922680)
chr8 (218-284)||(10028156-10028222)
chr8 (140-279)||(13405027-13405178)
chr8 (87-161)||(9718656-9718730)
chr8 (100-165)||(1281149-1281214)
chr8 (97-165)||(16024327-16024394)
chr8 (91-161)||(31543249-31543319)
chr8 (167-201)||(35694828-35694862)
chr8 (224-273)||(12022281-12022330)
chr8 (96-164)||(2248454-2248522)
chr8 (96-163)||(8815316-8815383)
chr8 (96-211)||(24243052-24243164)
chr8 (258-296)||(3726897-3726935)
chr8 (141-187)||(5562012-5562058)
chr8 (98-163)||(7394636-7394701)
chr8 (90-183)||(30365126-30365219)
chr8 (259-296)||(31543106-31543143)
chr8 (218-279)||(38198181-38198241)
chr8 (154-187)||(42919879-42919912)
chr8 (90-166)||(7503126-7503202)
chr8 (98-162)||(11575582-11575646)
[»] chr7 (56 HSPs)
chr7 (96-296)||(41496959-41497167)
chr7 (139-333)||(33655153-33655350)
chr7 (115-285)||(24970187-24970364)
chr7 (96-296)||(47390889-47391098)
chr7 (96-286)||(40196534-40196732)
chr7 (140-295)||(34235053-34235219)
chr7 (97-288)||(42306376-42306571)
chr7 (91-332)||(13770945-13771187)
chr7 (114-332)||(25887195-25887417)
chr7 (114-332)||(1051520-1051739)
chr7 (97-290)||(43230276-43230476)
chr7 (96-210)||(18231714-18231828)
chr7 (100-210)||(4833537-4833647)
chr7 (91-329)||(41008188-41008425)
chr7 (96-265)||(45940658-45940835)
chr7 (222-332)||(39856001-39856106)
chr7 (141-295)||(17852906-17853067)
chr7 (140-301)||(34228364-34228534)
chr7 (146-273)||(40572287-40572421)
chr7 (99-210)||(10315761-10315872)
chr7 (167-295)||(37417706-37417842)
chr7 (139-210)||(32872826-32872897)
chr7 (96-210)||(13425122-13425236)
chr7 (151-249)||(22163167-22163272)
chr7 (151-249)||(22221875-22221980)
chr7 (97-333)||(26365769-26366009)
chr7 (218-332)||(31571600-31571711)
chr7 (96-182)||(48881560-48881646)
chr7 (232-289)||(23029480-23029537)
chr7 (96-165)||(39856038-39856107)
chr7 (96-176)||(36267555-36267635)
chr7 (145-284)||(42087041-42087188)
chr7 (96-165)||(31571643-31571712)
chr7 (231-295)||(10315648-10315712)
chr7 (141-209)||(19835838-19835906)
chr7 (91-199)||(31553182-31553287)
chr7 (96-273)||(33519105-33519290)
chr7 (150-210)||(47229888-47229948)
chr7 (218-278)||(48152036-48152092)
chr7 (96-165)||(13771119-13771188)
chr7 (96-165)||(28074105-28074174)
chr7 (96-213)||(30592255-30592372)
chr7 (96-165)||(34228492-34228561)
chr7 (210-279)||(38378096-38378165)
chr7 (243-296)||(40196566-40196619)
chr7 (141-188)||(2087786-2087833)
chr7 (139-178)||(30891039-30891078)
chr7 (96-163)||(37925843-37925910)
chr7 (91-161)||(47390852-47390922)
chr7 (224-274)||(48013558-48013608)
chr7 (218-279)||(18795727-18795788)
chr7 (291-332)||(28074106-28074147)
chr7 (258-290)||(33655148-33655180)
chr7 (97-161)||(33655285-33655349)
chr7 (138-166)||(34235180-34235208)
chr7 (224-332)||(37925844-37925947)
[»] scaffold0067 (3 HSPs)
scaffold0067 (90-296)||(39182-39400)
scaffold0067 (96-165)||(39363-39432)
scaffold0067 (258-332)||(39189-39259)
[»] scaffold0262 (1 HSPs)
scaffold0262 (100-290)||(16302-16500)
[»] scaffold0171 (1 HSPs)
scaffold0171 (115-285)||(15995-16173)
[»] scaffold0096 (2 HSPs)
scaffold0096 (141-301)||(6613-6780)
scaffold0096 (91-162)||(6581-6652)
[»] scaffold0341 (1 HSPs)
scaffold0341 (139-294)||(18807-18968)
[»] scaffold0294 (1 HSPs)
scaffold0294 (93-273)||(15320-15507)
[»] scaffold0026 (2 HSPs)
scaffold0026 (133-333)||(1174-1377)
scaffold0026 (97-165)||(1175-1243)
[»] scaffold0198 (1 HSPs)
scaffold0198 (97-182)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-188)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (96-162)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (98-161)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 33041789 - 33041473
Alignment:
Q  1 taatattgtgaacttacttggtgttatttagttgtggtgagagtaatgtttcattgtctcatttagtttgagttacttaaaaatggttgttttatggtgt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33041789 taatattgtgaacttacttggtgttatttagttatggtgagagtaatgtttcattgtctcatttagtttgagttacctaaaaatggttgttttatggtgt 33041690  T
Q  101 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatta 200  Q
    ||||||||||||||||||||||||||||           |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33041689 gtttggatggaaagtttaggaggggaag----------atttattttttatttttaaattacggatactatgaaatgttttttaaaaagttaacatatta 33041600  T
Q  201 acatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctct 300  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||||||||      |||||||||     
T  33041599 acatgataaataacacttcaatcacacttaatttattttaaaaaaacacattatatagtctataatttaaaaatgaaaaataaa-----ttctcccctcc 33041505  T
Q  301 cttcccctcataaacctccaatccaaacacac 332  Q
     |||| ||| |||||| |||||||||||||||    
T  33041504 tttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 96 - 285
Target Start/End: Complemental strand, 33236192 - 33235996
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||| |||||||||| |||||| ||| |||| ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33236192 ggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaaca 33236094  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||||||||||||        ||||  | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  33236093 tattaacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaac 33235996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 332
Target Start/End: Original strand, 9719034 - 9719271
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||||||| ||  |||||||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacat 9719133  T
Q  197 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |||||  ||||||        |||| || ||||||||||| |||||| |||| |||| |||||||||||||||| |||||||||| ||||| ||||||      
T  9719134 attaatttgataaacaatcatataatacttcaatcacactaaatttaattta-aaaagcatgttatatagtccggaatttaaaaaagaaaattaaacc-- 9719230  T
Q  289 cctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
       | |||||||||||||||||||||||  ||||||||||||||    
T  9719231 ---cacccctctcttcccctcataaaccctcaatccaaacacac 9719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 96 - 333
Target Start/End: Original strand, 30487308 - 30487547
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||| |||||||| ||| | |||||||| | ||||||||||| ||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaaca 30487406  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  |||| |||||||    
T  30487407 tattaacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtagtttaaaaaataaaactaaaccc 30487506  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacact 333  Q
    ||| ||||     ||||||||| ||||||  ||||| |||||||||    
T  30487507 tccactcc-----cttcccctcctaaaccctcaatcgaaacacact 30487547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 99 - 336
Target Start/End: Original strand, 19278039 - 19278282
Alignment:
Q  99 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 198  Q
    |||||||||||||  |||||||||||||||| | | ||  |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatat 19278138  T
Q  199 ----taacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
        ||||||||||||        | | || ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaatttaaaaaag-aaaataaacc 19278237  T
Q  287 ctcctctcccctctcttcccctcataaacctccaatccaaacacacttaa 336  Q
         |||||||| ||||||||| |||||   ||||||||||||||||||    
T  19278238 -----ctcccctcccttcccctcctaaactctcaatccaaacacacttaa 19278282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 1390566 - 1390365
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| |||||||||||||| |  |||||||||||||| ||| | |    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1390566 tttaaggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagt 1390467  T
Q  191 taacatattaacatgata-------aataacacctcaatcacacttaatttattttagaa-aaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    ||||||||||||||||||       ||||| |  ||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||| ||||| ||    
T  1390466 taacatattaacatgataaatgatcaataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattttaaaaagaaaatta 1390367  T
Q  283 aa 284  Q
    ||    
T  1390366 aa 1390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 96 - 332
Target Start/End: Original strand, 9721140 - 9721378
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaaca 9721239  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||  ||||||        |||| || ||||||||||| | |||| |||| ||||||||||||||| ||||| |||||||||| ||||| ||||||     
T  9721240 tattaatttgataaacaatcatataatacttcaatcacactaactttaattta-aaaaacatgttatatggtccggaatttaaaaaagaaaattaaacc- 9721337  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        | |||||||||| || |||||||||  |||| |||||||||    
T  9721338 ----cacccctctcttaccttcataaaccctcaattcaaacacac 9721378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 5585304 - 5585486
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttactttt-catttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    |||||||||||||||  |||||||||||||||| |||| |  |||||||||| | ||||||||||||| | |||||||||| |||||||||||| |||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaaca 5585403  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 270  Q
    ||||||||| ||||        | || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5585404 tattaacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 5585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 96 - 332
Target Start/End: Complemental strand, 14515713 - 14515476
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||| | ||||  |||||  |||||||||||||||| | | ||||| ||||||||||| || ||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaaca 14515614  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||| ||||||||||        |||| || ||| ||||||||||||||||||||| |||||  |||| |||||||||||||||||| |||||| |||||     
T  14515613 tatgaacatgataaatgataatataatacttcattcacacttaatttattttagagaaaca--ttatctagtccgtaatttaaaaaagaaaaacaaacc- 14515517  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  14515516 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 14515476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 141 - 333
Target Start/End: Original strand, 4097559 - 4097755
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaat 232  Q
    |||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaat 4097658  T
Q  233 ttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 331  Q
    ||||||| | ||||| ||||||||| |||||||||||||||| ||||| | ||||     || ||||| ||||||||| ||||||  |||||||||||||    
T  4097659 ttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacc-----cttccctcccttcccctcttaaaccctcaatccaaacaca 4097753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 10818458 - 10818343
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaaca 10818359  T
Q  196 tattaacatgataaat 211  Q
    ||||||||||||||||    
T  10818358 tattaacatgataaat 10818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 91 - 268
Target Start/End: Complemental strand, 34176581 - 34176397
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggagggga-agggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 189  Q
    |||||||||||||||||||||  ||||| ||||| | || |||| ||  ||||| ||||||||||||||||||||| |||||||||||||||||  ||||    
T  34176581 tttatggtgtgtttggatggagggtttatgagggaagagagatgaga--gtttagttttcatttttaaattacggacactatgaaatattttttttaaag 34176484  T
Q  190 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 268  Q
    ||||||||||||||| ||||        |||| ||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  34176483 ttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttattttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 139 - 333
Target Start/End: Original strand, 21606889 - 21607086
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        |||| || ||| ||||||||     
T  21606889 gtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacacttt 21606988  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 330  Q
    ||||||||||||||||||| | |||||||  |||||||||||| ||||  |||||  || |     ||||||||||||| ||||||  ||||||||||||    
T  21606989 atttattttagaaaaacatataatatagtttgtaatttaaaaacgaaatgtaaacattcat-----ctctcttcccctcctaaaccctcaatccaaacac 21607083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 31849305 - 31849112
Alignment:
Q  143 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaattt 234  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||| |||||||        ||| || |||||||||||| ||||    
T  31849305 acttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgattt 31849206  T
Q  235 attttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 333  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||||| ||||||||    
T  31849205 attttagaaaaatatgttatatagtctgtagtttaaaaaagaaaactaaacc-----ctcccctcccttcccctcttaaaccctcaatcctaacacact 31849112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 1300862 - 1300654
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||| | ||  ||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1300862 ggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaaca 1300763  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttat-tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||||||| ||||||        |||| || ||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||   ||| ||||||    
T  1300762 tattaacctgataaacaatcatataatacttcaatcacacttaatttatcttgaaaaaaatatgttatataatccgtaatttaaaaacataaagtaaacc 1300663  T
Q  287 ctcctctcc 295  Q
    |||| ||||    
T  1300662 ctcccctcc 1300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 10348850 - 10348986
Alignment:
Q  146 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 237  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |||||        |||| || |||||| ||||| | |||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattatt 10348949  T
Q  238 tt-agaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    || | ||||||||||||||||||||||||||||||||    
T  10348950 ttaaaaaaaacatgttatatagtccgtaatttaaaaa 10348986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 16737998 - 16738205
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| ||| ||||| || |||||  |||||||||| ||||||||||| ||| |||||||||| |||||| | || |||| |    
T  16737998 ggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaa 16738097  T
Q  196 tattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    || |||||||||        | |||| || | ||| ||||||| |||||||||||||||||| ||||||| || |||||||||||| ||||| ||||| |    
T  16738098 taataacatgatatacgatcatataatacttaaataacacttactttattttagaaaaacattttatataatctgtaatttaaaaaagaaaagtaaactc 16738197  T
Q  288 tcctctcc 295  Q
    ||| ||||    
T  16738198 tcccctcc 16738205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 2893742 - 2893670
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||| ||||    
T  2893742 tcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaactctcc 2893670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 140 - 284
Target Start/End: Original strand, 2892650 - 2892801
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 231  Q
    |||||||||  || |||||||||| | ||||||| |||||||||||||| |||| ||| ||||||||||||        ||| |  ||||||||||| ||    
T  2892650 tttactttttgttgttaaattacgcacactatgagatattttttaaaaa-ttaaaataataacatgataaacaatcatataatatttcaatcacactaaa 2892748  T
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| ||||    
T  2892749 tttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaa 2892801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 479
Target Start/End: Complemental strand, 33040739 - 33040656
Alignment:
Q  396 tagtctttaacacagtatgactttcctatttacattattgtttgagttggcatgaggaagagataagtttgatcgaaaataaaa 479  Q
    |||||||||||| || ||| ||||||||||||||||||||||||| |||  |||||||||||||||||||||| |||| |||||    
T  33040739 tagtctttaacatagcatgtctttcctatttacattattgtttgaattgatatgaggaagagataagtttgatggaaactaaaa 33040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 218 - 332
Target Start/End: Original strand, 12811112 - 12811221
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 317  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||| | ||||| ||| ||     ||||||||||||||| || ||||||     
T  12811112 tcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatcc-----ctcccctctcttcccatcctaaaccc 12811206  T
Q  318 ccaatccaaacacac 332  Q
     ||||||||||||||    
T  12811207 tcaatccaaacacac 12811221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 272
Target Start/End: Complemental strand, 13583890 - 13583777
Alignment:
Q  167 actatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatag 258  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||        || |  ||||||||||||||||||||||||||||||||||||||||     
T  13583890 actatgaaatgttttttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttatataa 13583791  T
Q  259 tccgtaatttaaaa 272  Q
    || |||||||||||    
T  13583790 tctgtaatttaaaa 13583777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 2900109 - 2900038
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||| ||||||||||||||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaa 2900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 6034204 - 6034275
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||| |||| ||||    
T  6034204 tcaatcacacttaatttattttagaaaaacatgttatacagtctgcaatttaaaaaagaaaagtaaatcctc 6034275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 292
Target Start/End: Complemental strand, 26318546 - 26318343
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||||||| |||||||||||| |||||| |||||  |||||||||| ||||||||||| ||||  ||| ||||   ||||| ||| || |  |    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaatt 26318447  T
Q  197 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |  ||||||||||        |||| || ||||  ||||||||||||||||| |||||||| ||||||  | |||||||||||||  |||||| ||||||    
T  26318446 aacaacatgataattgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttttcgtaatttaaaaaataaaaatgaaccct 26318347  T
Q  289 cctc 292  Q
    ||||    
T  26318346 cctc 26318343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 293
Target Start/End: Original strand, 665843 - 666054
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt-aac 194  Q
    |||||||||||||| |  ||||||||||||||| || ||||  ||| | ||||||||||||||||| | ||| |||||||| | ||||||||| || |||    
T  665843 ggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaac 665941  T
Q  195 atattaacatgataaat--------aacacctcaatcacacttaatttattttaga------aaaacatgttatatagtccgtaatttaaaaatgaaaaa 280  Q
    |||||||||||||||||        || || |||| |||||||||||| |||||        |||||||||| ||||||| ||| |||||||| ||||||    
T  665942 atattaacatgataaatgatgatataatacttcaaccacacttaattttttttattttttataaaacatgttgtatagtctgtagtttaaaaaagaaaaa 666041  T
Q  281 taaaccctcctct 293  Q
    ||||| |||||||    
T  666042 taaactctcctct 666054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 1395834 - 1395691
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac--------acctcaatcacacttaa 231  Q
    |||||||||||||||||||||||  | ||| |  ||| ||||||||||| ||||||||||| |||||||||| |         |  ||||||||||||||    
T  1395834 tttacttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaa 1395735  T
Q  232 tttattttagaaaaa-catgttatatagtccgtaatttaaaaat 274  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  1395734 tttattttataaaaaacatgttacatagtccgtaattaaaaaat 1395691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 9721210 - 9721141
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||||||||||||||||     |||||||| ||||||||| ||||||| ||||||||||||||    
T  9721210 gtccgtaatttaaaaatgaaaaataaacc-----ctcccctcccttcccctcctaaaccttcaatccaaacacac 9721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 10818231 - 10818300
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacgga 10818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 9298636 - 9298709
Alignment:
Q  236 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctc 309  Q
    ||||| |||||||| | |||  ||||||||||||||| |||||| |||||||||| |||||||| |||||||||    
T  9298636 ttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcccctcccttcccctc 9298709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 10818316 - 10818232
Alignment:
Q  243 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||| |||||||||||||||| ||||||||||     |  ||||||| ||||||||| ||||||  ||||||||||||||    
T  10818316 aaaacatgttatattgtccgtaatttaaaaaagaaaaataaa-----caatcccctcccttcccctcctaaaccctcaatccaaacacac 10818232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 9298685 - 9298625
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatat 198  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||    
T  9298685 gtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 19278278 - 19278211
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacgga 19278211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 332
Target Start/End: Original strand, 30849960 - 30850153
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 231  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||  |||| ||| |||||||||||        |||| || ||||| | ||| ||    
T  30849960 tttacatttcgtttttaaattacgcatactataaaatattttttaaaa--ttaaaataataacatgataaacgatcatataatacttcaattatactaaa 30850057  T
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 331  Q
    ||| ||||| |||||||| ||||||| | | ||||||||||   |||| ||||     ||||||| |||||| ||||| ||||||  |||||||||||||    
T  30850058 tttgttttaaaaaaacatattatataattcataatttaaaataaaaaagtaaa-----ctctcccttctctttccctcctaaaccctcaatccaaacaca 30850152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 2892890 - 2893053
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactt--a 230  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||| ||  ||| ||| ||||||||||||        ||| || |||||||||||   |    
T  2892890 ttactttttgtttttaaattacgcacactatgaaatattttgtaagaaagtaaaataataacatgataaacgatcatataatacttcaatcacactataa 2892989  T
Q  231 atttattttagaaaa-acatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctct 293  Q
    |||||||| | |||| | || ||||||||| ||||||||||||| ||||| |||||||||||||    
T  2892990 atttatttaaaaaaatatattttatatagttcgtaatttaaaaaagaaaagtaaaccctcctct 2893053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 14548738 - 14548793
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||| ||||||||||||| || ||||| |||||| ||||||||||||||||    
T  14548738 tcaatcacagttaatttattttaaaataacattttatattgtccgtaatttaaaaa 14548793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 7775996 - 7776046
Alignment:
Q  143 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 193  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||    
T  7775996 acttttcattttaaaattacgaacactataaaatattttttaaaaagttaa 7776046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 9719103 - 9719034
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||||||||||||||||||||||||||| |     |||||||| ||||||||| ||||||  ||||||||||||||    
T  9719103 gtccgtaatttaaaaatgaaaaataaatc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 14515475 - 14515544
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 14515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 25741566 - 25741476
Alignment:
Q  179 tttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtcc 261  Q
    ||||||||||||||||||| ||| ||||||||        ||| || ||| |||| |||||||||||||| ||||||||||||||||||||    
T  25741566 tttttaaaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagtcc 25741476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 1300787 - 1300829
Alignment:
Q  253 atatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||| |||||||||||||||||||||| |||||||||| ||||    
T  1300787 atattgtccgtaatttaaaaatgaaaagtaaaccctcccctcc 1300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 10818388 - 10818426
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  10818388 gtccgtaatttaaaaatgaaaagtaaaccctcccctccc 10818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 23091195 - 23091129
Alignment:
Q  102 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttc-atttttaaattacggata 167  Q
    ||||||||||  |||||||||||||||||| ||||  | |||||||||  |||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggata 23091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 31799120 - 31799070
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 188  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaa 31799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 21607085 - 21607020
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    |||||||||||| ||  ||||||||||||||| ||   |||||||||| |||| ||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattac 21607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 4097754 - 4097686
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||||| ||  ||||| |||||||||||| || |  ||| ||||||| |||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacgga 4097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 21606915 - 21606879
Alignment:
Q  259 tccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  21606915 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 21606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 23090997 - 23091037
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatggga 136  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggagggga 23091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 23091038 - 23090998
Alignment:
Q  292 ctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  23091038 ctcccctcccttcccctcctaaaccttcaatccaaacacac 23090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 2e-66; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 91 - 332
Target Start/End: Original strand, 41110318 - 41110562
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagt 41110417  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    |||||||||||||||||||        |||| || |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||    
T  41110418 taacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaacgaaaagta 41110517  T
Q  283 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||| ||||||||     |||||||||| |||||  ||||||||||||||    
T  41110518 aaccttcctctcc-----cttcccctcacaaaccctcaatccaaacacac 41110562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 96 - 296
Target Start/End: Complemental strand, 24560459 - 24560251
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24560459 ggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaaca 24560360  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  24560359 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccc 24560260  T
Q  288 tcctctccc 296  Q
    ||| |||||    
T  24560259 tcccctccc 24560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 115 - 301
Target Start/End: Original strand, 25654991 - 25655187
Alignment:
Q  115 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat--- 211  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||| | |||| ||||| |||||| || |||||||||||||| |||||||||       
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaatgat 25655090  T
Q  212 -------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 301  Q
           || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  25655091 catatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaagttaaaccctcccctcccttctc 25655187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 91 - 333
Target Start/End: Original strand, 18654597 - 18654843
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  18654597 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 18654696  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||    
T  18654697 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaa----aaaagta 18654792  T
Q  283 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 333  Q
    || |   |||||||||| ||||||||| ||||||  |||| ||||||||||    
T  18654793 aaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacact 18654843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 139 - 301
Target Start/End: Original strand, 220442 - 220612
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||        ||||||| ||||||| ||||     
T  220442 gtttagttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttg 220541  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||  |||| ||||| ||||    
T  220542 atttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctc 220612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 114 - 279
Target Start/End: Complemental strand, 52474139 - 52473966
Alignment:
Q  114 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 209  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||        
T  52474139 gtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaacag 52474040  T
Q  210 ----ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
        |||| || |||||||||  |||||||||||| || ||||||||||||| ||||||||||||||| |||||    
T  52474039 tcatataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaagaaaa 52473966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 288
Target Start/End: Original strand, 30200133 - 30200293
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac-----------acctcaatcacac 227  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||| |||           || | ||||||||    
T  30200133 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacac 30200232  T
Q  228 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  30200233 ttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccct 30200293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 295
Target Start/End: Original strand, 37102194 - 37102358
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa-------ataacacctcaatcacacttaa 231  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||       |||| || |||| ||||||| |    
T  37102194 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataataacgatcatataatacttcaaccacacttga 37102293  T
Q  232 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||||||| |||||||||||||||||||||||||||||||| || || |||||| ||| ||||    
T  37102294 tttattttagaaaaaacatgttatatagtccgtaatttaaaaaagataagtaaaccttcccctcc 37102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 139 - 329
Target Start/End: Complemental strand, 21773981 - 21773788
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 230  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||||||||||||||||| ||||||||||        |||  | |||||||||||||    
T  21773981 gtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaacaatcatataattcttcaatcacactta 21773882  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 329  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||     || || || ||||||||| ||||||| |||||||||||    
T  21773881 atttattttagaaaaacatgttatatagtccgtaatttagaaaagaaaagtatacc-----cttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 289
Target Start/End: Original strand, 41039947 - 41040153
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||| ||||||||||||||| ||  | |   |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  41039947 tttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagt 41040046  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    |||||||||||||||||||        |||| || |||||||| |||| ||||||||| |||| |||||||| || ||||||||||||||  ||||| ||    
T  41040047 taacatattaacatgataaacaatcatataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagcgaaaagta 41040146  T
Q  283 aaccctc 289  Q
    |||||||    
T  41040147 aaccctc 41040153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 46556369 - 46556178
Alignment:
Q  113 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatg------- 205  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||           
T  46556369 agtttaggagaggaatggaggggag-gtttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatgacaaacg 46556271  T
Q  206 ---ataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
       ||| |||| || ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||| ||||| ||||| |||| ||||    
T  46556270 gtcatatataatacttcaatcacactcaatttattttggaaaaacatattatatagtctgtaatttaaaaaagaaaattaaactctcccctcc 46556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 296
Target Start/End: Original strand, 27541937 - 27542141
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 199  Q
    ||||||||| ||  |||||||||||||||||| | ||  ||| || ||||||||||||||||  || ||||||||||| || |||||||  |||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatatt 27542036  T
Q  200 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 291  Q
    ||||||||||        |||| || ||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||| |||||| |||| ||||     
T  27542037 aacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaaacaaactctccc 27542136  T
Q  292 ctccc 296  Q
    |||||    
T  27542137 ctccc 27542141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 145 - 299
Target Start/End: Original strand, 9312522 - 9312687
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 236  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||        |||| ||   |||||||||||||||||    
T  9312522 ttttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttat 9312621  T
Q  237 tttagaaaaac---atgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 299  Q
    ||||||||| |   ||||||||||||| |||||||||||| |||||  ||||||||| ||||||||    
T  9312622 tttagaaaatcatgatgttatatagtcggtaatttaaaaaagaaaatcaaaccctcccctcccctc 9312687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 255
Target Start/End: Original strand, 36568906 - 36569072
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  ||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||    
T  36568906 ggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaaca 36569004  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttata 255  Q
    ||||||||||||||        |||| |  ||||||||||||||||||||||||||||||||| ||||    
T  36569005 tattaacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacatgatata 36569072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 16275707 - 16275875
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||  |||| |||||| ||||  ||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||||||     
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaact 16275806  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatat 256  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||||||||||||||||||||    
T  16275807 tattaacatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacatgttatat 16275875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 151 - 296
Target Start/End: Original strand, 2387817 - 2387970
Alignment:
Q  151 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 242  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||| ||| ||||||||||||        ||| |  | |||||||||||||||||||||||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttaga 2387916  T
Q  243 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    |||||||||||||||| |||| ||||| ||| ||||| |||||||||| |||||    
T  2387917 aaaacatgttatatagaccgtgatttagaaaagaaaagtaaaccctcccctccc 2387970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 28581189 - 28581291
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||||||||||  |||||| || |||||||| ||||  ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacat 28581288  T
Q  197 att 199  Q
    |||    
T  28581289 att 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 37807321 - 37807131
Alignment:
Q  98 tgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||| |||||  |||||||||||| ||| || |  |||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||    
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatat 37807222  T
Q  197 attaacatgataa--------ataacacctcaatcacacttaa-tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
    |||||||||||||        |||| || |||||||||||||| ||||||||  ||||| |||||||||||| |||| |||||||| |||||    
T  37807221 attaacatgataaacgatcatataatacttcaatcacacttaattttattttttaaaaa-atgttatatagttcgtagtttaaaaaagaaaa 37807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 651841 - 651771
Alignment:
Q  220 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  651841 aatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctcc 651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 98 - 273
Target Start/End: Original strand, 10748299 - 10748484
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 197  Q
    ||||||||||||||  ||||||||||||||||||   ||  ||||||     |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagtttac-----atttttaaattacgggcattataaaatgttttttaaaaagttaacata 10748393  T
Q  198 ttaacatgataaat---------------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||               || || |  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10748394 ttaacatgataaatgataaaaggtcatataatacttttatcacacttaatttattttagaaaaacatgttatatactccgtaatttaaaaa 10748484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 46204998 - 46204931
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| |||||    
T  46204998 tcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaac 46204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 14898088 - 14898022
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||    
T  14898088 tcaatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaaaagtaaa 14898022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 28582641 - 28582719
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    |||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||    
T  28582641 tcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctcccctccc 28582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 43005804 - 43005942
Alignment:
Q  157 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaaca 248  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||        |||| || ||||||| | | ||||||||||||||||| |    
T  43005804 aattacggat--tatgaaatattttttaaaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaata 43005901  T
Q  249 tgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    |||||||||||  | |||||||||| ||||| |||| ||||    
T  43005902 tgttatatagtttggaatttaaaaaagaaaattaaatcctc 43005942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 218 - 332
Target Start/End: Original strand, 6803333 - 6803442
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 317  Q
    |||||||||| |||||||||||| |||||| | ||  |||||| |||||||||||| ||||| ||||     ||||| |||||||||||||| |||||||    
T  6803333 tcaatcacacataatttattttataaaaacttattgcatagtctgtaatttaaaaaagaaaattaaa-----ctctctcctctcttcccctcctaaacct 6803427  T
Q  318 ccaatccaaacacac 332  Q
     ||||||||||||||    
T  6803428 tcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 145 - 285
Target Start/End: Complemental strand, 52185207 - 52185060
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 236  Q
    |||| |||||||||||| ||| ||||  ||||||||| |||||||||||||||||||||||||||        |||| || ||||| | | |||||||||    
T  52185207 tttttatttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttat 52185110  T
Q  237 tttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||| |||||||||||||||| |  |||||||||||| ||||| |||||    
T  52185109 tttagaaaaaacatgttatataatttgtaatttaaaaacgaaaagtaaac 52185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 55327563 - 55327422
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 236  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||||| | ||||||||| |||||        |||  | ||||||||| || ||||||    
T  55327563 ttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaacgaacatataatgcttcaatcacatttgatttat 55327464  T
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    || |||||| |||||||| |||||||||||||||||| ||||    
T  55327463 ttaagaaaagcatgttatgtagtccgtaatttaaaaaagaaa 55327422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 54574493 - 54574560
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||| ||||    
T  54574493 tcaatcacgcttaatttattttagaaaaacgtgttatatagtctgtaattaaaaaaagaaaaacaaac 54574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 316
Target Start/End: Original strand, 40463874 - 40464096
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||||| |  ||||| ||||  ||  |||| || ||| |||||||||||||||||||||||| ||||| || | ||||||||||  |||| |     
T  40463874 gtgtgtttggatgaagggtttatgaggataaacgatgagagtgtgtacttttcatttttaaattacggacactataaattgttttttaaaatattaaaac 40463973  T
Q  197 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    | ||||||||||||        ||| |  |||||| |||||||||||||||||||||| ||||||| ||| || | ||||| ||| ||||| ||||        
T  40463974 aataacatgataaacaatcatataaaaattcaatctcacttaatttattttagaaaaatatgttatgtagcccttgatttagaaaagaaaagtaaa---- 40464069  T
Q  289 cctctcccctctcttcccctcataaacc 316  Q
     ||||||||||| |||| ||||||||||    
T  40464070 -ctctcccctctattcctctcataaacc 40464096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 34641232 - 34641163
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 10943752 - 10943852
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 323  Q
    ||||||||||||||||| |||||||| ||  || || |||||||||||||| |||| | ||||     |||||||||||| ||||||||||||  |||||    
T  10943752 acacttaatttattttaaaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaacc-----ctcccctctctttccctcataaaccctcaatc 10943846  T
Q  324 caaaca 329  Q
    ||||||    
T  10943847 caaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 17474209 - 17474301
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 188  Q
    |||||||||||| ||  ||||||||||| |||  |||| || ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaa 17474301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 24253970 - 24253895
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatg-tttacttttcatttttaaattacgga 165  Q
    ||||| ||||||||||||||||  |||||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaaggga-gggaaggatttacttttcttttttaaattacgga 24253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 26136044 - 26135952
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 183  Q
    |||| |||||| ||| |||||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||||| | ||| ||||| |||||    
T  26136044 tttaaggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttt 26135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 31684398 - 31684362
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttat 254  Q
    |||||||||||||||||||||||||||||||||||||    
T  31684398 tcaatcacacttaatttattttagaaaaacatgttat 31684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  99 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 220644 - 220570
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||| ||| ||||||||||||  |||||||||| ||||||| ||||   |||||||||| |||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacgga 220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 17474446 - 17474356
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 188  Q
    ||||||||||| ||  ||| |||||||||||||| ||||  ||| ||||||  ||||||||||||| ||| | | ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaa 17474356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 28582732 - 28582682
Alignment:
Q  115 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  28582732 tttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 28582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 41110563 - 41110494
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||| |||||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacgga 41110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 331
Target Start/End: Complemental strand, 12790478 - 12790377
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 323  Q
    |||||||||||||| |||||||||||||||||||| |   ||| |||||| ||||| |||||      |||| ||||||||| ||| ||||||  |||||    
T  12790478 acacttaatttattatagaaaaacatgttatatagcctacaatataaaaaagaaaagtaaac------ctcctctctcttcctctcctaaaccctcaatc 12790385  T
Q  324 caaacaca 331  Q
    ||||||||    
T  12790384 caaacaca 12790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 31894020 - 31894056
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttat 254  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31894020 tcaatcacatttaatttattttagaaaaacatgttat 31894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 37237034 - 37236963
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||||||||||||||||||  |||||||| || ||  ||| |||||||||||||||||| ||| ||||||    
T  37237034 tcaatcacacttaatttatttt-caaaaacattttgtagcgtctgtaatttaaaaatgaaaagtaagccctcc 37236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 13082856 - 13082943
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 183  Q
    ||||||||||||||||  |||||| || | ||| ||  |||| ||||| |||| ||||||||| |||||| |||||||||| ||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatgtttttt 13082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 55428619 - 55428552
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacgga 55428552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 23028168 - 23028086
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat 178  Q
    ||||||||||||||||  |||| |||||||||  || || |    |||||||| |||||||||||||||| ||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    |||||||||||| ||| ||||||||||||||| || | ||  ||||| ||||| ||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 21773788 - 21773853
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||| ||| |||||||||||||||||| || |  || |||||||| ||| |||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacgga 21773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 24560219 - 24560288
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 24560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 30200160 - 30200123
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  30200160 gtccgtaatttaaaaatgaaaactaaaccctcccctcc 30200123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 37102221 - 37102184
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  37102221 gtccgtaatttaaaaatgaaaactaaaccctcccctcc 37102184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 52474088 - 52474125
Alignment:
Q  259 tccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52474088 tccgtaatttaaaaataaaaagtaaaccctcctctccc 52474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 30200312 - 30200264
Alignment:
Q  117 taggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacgga 30200264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 42772087 - 42772047
Alignment:
Q  292 ctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  42772087 ctcccctcccttcccctcttaaaccttcaatccaaacacac 42772047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 96 - 332
Target Start/End: Original strand, 36347543 - 36347782
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    |||||||||||||| |  |||||||||||||||||| | ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaaca 36347642  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||       
T  36347643 tattaacatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaa--- 36347739  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
      ||||||| || ||||||||| ||||||  ||||||||||||||    
T  36347740 --ctctcccttcccttcccctcctaaaccctcaatccaaacacac 36347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 23748337 - 23748130
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaaca 23748238  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||    
T  23748237 tattaacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccc 23748138  T
Q  288 tcctctcc 295  Q
    ||| ||||    
T  23748137 tcccctcc 23748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 94 - 330
Target Start/End: Original strand, 8426879 - 8427110
Alignment:
Q  94 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 193  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  8426879 atggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaagttaa 8426978  T
Q  194 catattaacatgat-aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctc 292  Q
    |||  ||| ||||| | |||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||     |||    
T  8426979 catgataa-atgatcatataatacttcaatcgcacttaatttattttagaaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaa-----ctc 8427072  T
Q  293 tcccctctcttcccctcataaacctccaatccaaacac 330  Q
    ||||||| ||| ||||| ||||||  ||||||||||||    
T  8427073 tcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 15224733 - 15224904
Alignment:
Q  133 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 224  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||        |||| || |||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatca 15224832  T
Q  225 cacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||    
T  15224833 cacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccctccc 15224904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 332
Target Start/End: Original strand, 36046206 - 36046442
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046206 ggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaaca 36046305  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    |||||||||| |||        |||| || |||||  |||| ||||||||||| |||| |||||||||| ||||||||||||||||  |||| |||||      
T  36046306 tattaacatgttaaatgatcacataatacttcaat--cactcaatttattttataaaagcatgttatatcgtccgtaatttaaaaaacaaaagtaaac-- 36046401  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        |||||||| ||||||||||||||||  ||||||||||||||    
T  36046402 ----ctcccctcccttcccctcataaaccctcaatccaaacacac 36046442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 284
Target Start/End: Original strand, 39732774 - 39732926
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||||||||||||||||||||||| | | |||||||| |||| |||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  39732774 gtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 39732873  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  39732874 atttattttagaaaaacatg-tatatagtccgtaatttaaaaacgaaaagtaaa 39732926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 19566822 - 19567030
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaac 194  Q
    |||||||||||| |||  |||||| |||| ||| ||  |||  |||||||| ||| ||||||||||| || |||||||||| |||||| ||||||||| |    
T  19566822 ggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagc 19566921  T
Q  195 atattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||||||| ||||||||        ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||    
T  19566922 atattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaatgaaattaaacc 19567021  T
Q  287 ctcctctcc 295  Q
    |||| ||||    
T  19567022 ctcccctcc 19567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 139 - 295
Target Start/End: Complemental strand, 39821868 - 39821704
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacactta 230  Q
    ||||| ||||| ||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||        || || | |||| ||||||    
T  39821868 gtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaatgatcttataatacttaaatcgcactta 39821769  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||| ||||    
T  39821768 atttattttagaaaaacatgttatagaatccataatttaaaaatgaaaagtaaaccctcccctcc 39821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 137 - 273
Target Start/End: Complemental strand, 16565978 - 16565832
Alignment:
Q  137 atgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacact 228  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||        |||| || |||||||||||    
T  16565978 atgtttactttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacact 16565879  T
Q  229 taatttattttagaaaaacatgt--tatatagtccgtaatttaaaaa 273  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||    
T  16565878 taatttattttagaaaaacatgttatatatagttcgtaatttaaaaa 16565832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 118 - 335
Target Start/End: Original strand, 36566874 - 36567096
Alignment:
Q  118 aggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaa-tattttttaaaaagttaacatattaacatgataa------- 209  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||| | ||||||| | |||| |||||||||||||||||||||||||||           
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatca 36566973  T
Q  210 -ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa-taaaccctcctctcccctctcttcccc 307  Q
     |||| || ||||||||| |||||||||| ||||||||||||||||||| | | ||||||||||| |||||| ||||   || |||  ||||| ||||||    
T  36566974 tataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaacgaaaaagtaaa---tcatct--cctctattcccc 36567068  T
Q  308 tcataaacctccaatccaaacacactta 335  Q
    || ||||||  |||||||||||||||||    
T  36567069 tcctaaaccctcaatccaaacacactta 36567096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 96 - 273
Target Start/End: Complemental strand, 40022615 - 40022427
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 194  Q
    |||||| |||||||||  ||||| |||| ||||||| ||||  |||||| ||||||||||||||||| || ||||||||||  ||||||||||||| |||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaac 40022516  T
Q  195 atat--taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||  ||| ||| |||        |||| || ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  40022515 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaaaaa 40022427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 100 - 299
Target Start/End: Complemental strand, 12541999 - 12541796
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 199  Q
    ||||||||||||  |||||||||  ||||||| ||| |  ||||||||||||    ||||||| |||||||| |||| |||||||||||||||||| |||    
T  12541999 tgtttggatggagggtttaggagaagaaggga-gggtagatttacttttcat----aaattacagatactataaaatgttttttaaaaagttaacacatt 12541905  T
Q  200 aacatgataaa--------taacacctcaatcacacttaatttattttagaaaaac-atgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||        ||  || |||||| ||||||||||||||||||||||  || ||||||||||||||||||||||| ||||| || || ||||    
T  12541904 aacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaaatattttatatagtccgtaatttaaaaaagaaaagtagactctcc 12541805  T
Q  291 tctcccctc 299  Q
     ||||||||    
T  12541804 cctcccctc 12541796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 34209706 - 34209592
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    |||||||||||||| |  |||||| | |||| |||| || |  | ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  34209706 ggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaaca 34209607  T
Q  196 tattaacatgataaa 210  Q
    |||||||||||||||    
T  34209606 tattaacatgataaa 34209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 28262500 - 28262642
Alignment:
Q  151 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 242  Q
    ||||||||||| | | ||||||||||||||||||||||||||| ||| ||||||||||||        ||| |  |||||||||  ||||||||||||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttaga 28262599  T
Q  243 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||||||||||||||||  ||||||||||| ||||| |||||    
T  28262600 aaaacatgttatatagtcaataatttaaaaaagaaaagtaaac 28262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 97 - 299
Target Start/End: Original strand, 31795772 - 31795982
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||||||||||  ||||| |||| ||||||| ||||    ||||||||| ||||||||||||||| |||||||||  |||||| ||||  ||| ||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  197 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |  |||||||||||        ||| || ||||||||||||||||||||||| ||||||||||||| || ||||| ||||| ||| ||||| ||| ||||    
T  31795872 aacaacatgataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatttactccgtgatttagaaaagaaaattaatccct 31795971  T
Q  289 cctctcccctc 299  Q
    ||  |||||||    
T  31795972 cccttcccctc 31795982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 139 - 285
Target Start/End: Complemental strand, 7681443 - 7681293
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac---atattaacatgat-aaataacacctcaatcacacttaattt 234  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||   ||||  | | ||| | |||| || |||||||||||||||||    
T  7681443 gtttactttttatttttaaattgcggatattatgaaatatttttttaaaagttaacatgatatacaaacgatcatataatacttcaatcacacttaattt 7681344  T
Q  235 attttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    |||||| |||||  | ||||||| ||||||||| |||||||||||| ||||    
T  7681343 attttacaaaaaactattatataatccgtaattaaaaaatgaaaaacaaac 7681293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 9631802 - 9631688
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||||||||| ||||||   ||  ||| ||||||| ||||||||||||||| || ||||||| |  |||||||||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaaca 9631703  T
Q  196 tattaacatgataaa 210  Q
    |||||||||||||||    
T  9631702 tattaacatgataaa 9631688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 133 - 284
Target Start/End: Original strand, 29525768 - 29525931
Alignment:
Q  133 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaa--aaagttaacatattaacatgataaa----------taacacctca 220  Q
    |||| |||| |||||||| ||||||||||| ||||||||||| | ||||||    |||||||||||||||||||||||||          ||| || |||    
T  29525768 gggagtgttcacttttcaattttaaattactgatactatgaatttttttttttggaaagttaacatattaacatgataaaaagtattatataatacttca 29525867  T
Q  221 atcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||| ||||||||||||| |||||||| ||||||| ||||| ||||||||| ||||||||||    
T  29525868 atcacatttaatttattttaaaaaaacatattatatattccgtgatttaaaaaagaaaaataaa 29525931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 27926752 - 27926681
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    ||||| ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaa 27926681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 35736283 - 35736178
Alignment:
Q  222 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaa 321  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||| |||     || |||||||| ||||||||| ||||||  |||    
T  35736283 tcacacttcatttattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaa-----cccctcccctcccttcccctcctaaaccctcaa 35736189  T
Q  322 tccaaacacac 332  Q
    |||||||||||    
T  35736188 tccaaacacac 35736178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 9427179 - 9426988
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaa-aaagttaacatattaacatgataaa--------taacacctcaatcacacttaattta 235  Q
    ||||||||||||||||||||| ||||| |||| ||||||   ||||||| ||||||| |||||||||        ||| || |||||||| | |||||||    
T  9427179 ttttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaacaaacatataatacttcaatcacgcataattta 9427080  T
Q  236 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
     ||| |||||||||||||||||||  |||||||||||| |||||  |||||     ||| |||| ||||||||| ||||| | ||||||||||||||    
T  9427079 gttttgaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaacc-----ctctcctcccttcccctcctaaactttcaatccaaacacac 9426988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 42316809 - 42316880
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    |||||||||||||||||||||| |  | |||||||||| ||||||||||||||||| |||||||||||||||    
T  42316809 gtttacttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaa 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 17379994 - 17379897
Alignment:
Q  156 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaa 245  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||        |||| ||  |||||||||||||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 1583272 - 1583222
Alignment:
Q  143 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 193  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 2241570 - 2241471
Alignment:
Q  178 ttttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattta 269  Q
    |||||| |||| |||||||||||||||||||||        ||| || ||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  2241570 tttttttaaaatttaacatattaacatgataaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaattta 2241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 37739949 - 37740085
Alignment:
Q  150 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttag 241  Q
    ||||| |||||||| | |||||||| |  |||| |||||||||| ||||||||||||||||        ||| || ||||||||||||||||||||||||    
T  37739949 attttaaaattacgaacactatgaagt--ttttcaaaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttag 37740046  T
Q  242 -aaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
     |||||||||||||||| || | |||||||||| |||||    
T  37740047 aaaaaacatgttatataatctggaatttaaaaaagaaaa 37740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 9591973 - 9592022
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  9591973 acacttaatatattttagaaaaacatgttatatagtgcgtaatttaaaaa 9592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 36347783 - 36347714
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacgga 36347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 35736429 - 35736337
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 188  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  | | ||||||| |||||||||| |||| |||||||||  |||||||||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaaa 35736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 887351 - 887261
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 187  Q
    ||||||| |||||| || |||||||||||||||||| ||||  | ||||||||| |||||||||||||||| |||| |||| ||||| ||||    
T  887351 ggtgtgtctggatg-aaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa 887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 41841793 - 41841722
Alignment:
Q  219 caatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||| ||||||||||||||| |||| ||||||||||||  |||||||||||| |||||  |||||||||    
T  41841793 caatcacccttaatttattttaggaaaatatgttatatagttggtaatttaaaaaagaaaatcaaaccctcc 41841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 45257555 - 45257456
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 188  Q
    ||||| ||||||||||||||||   ||||||| ||||||||| | ||  ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 6721754 - 6721820
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||  |||||||| ||||| ||||    
T  6721754 tcaatcacacttgatttattttagaaaaacatgctatatattccgtggtttaaaaaagaaaactaaa 6721820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 9426985 - 9427053
Alignment:
Q  94 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    ||||||||||||||| |||||||||||||||||||||| | ||  ||||  ||||| ||||||||||||    
T  9426985 atggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 15224936 - 15224868
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 164  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgg 15224868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 17380083 - 17380007
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatg 172  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| ||||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 34187577 - 34187644
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||||| || |||||||||| |||||| | ||||| ||| |||||| ||||||||||||||    
T  34187577 ggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacg 34187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 41778885 - 41778807
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||||||||||||||||||| |||||||| |||||  |||| |||||||||    |||| |||||||||| |||||    
T  41778885 tcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccc 41778807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 39732978 - 39732901
Alignment:
Q  88 tgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||| ||||||||||||| ||| ||||  |||||||||| | ||||   |||||||||| |||||||||||||||    
T  39732978 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacgga 39732901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 27926669 - 27926613
Alignment:
Q  229 taatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||||||||||||||||||||||||| | |||   ||||||||| |||||||||||    
T  27926669 taatttattttagaaaaacatgttatacaatccagtatttaaaaaagaaaaataaac 27926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  99 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 158  Q
    |||||||||| ||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 22356252 - 22356177
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||| ||||||||||||| ||   ||||||||||||||||| ||||  ||| | ||||| |||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 31061361 - 31061428
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||||| ||| |||||||||||||| ||||||||  | | ||||||  |||||||||||||    
T  31061361 ggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacg 31061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 35736172 - 35736246
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||  | ||| ||||| ||||||||| |||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacgga 35736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 36046276 - 36046207
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||||||||||||||     ||||||||||  |||||||| ||||||  | ||||||||||||    
T  36046276 gtccgtaatttaaaaatgaaaaataaa-----ctctcccctcatttcccctcctaaaccctccatccaaacacac 36046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 290
Target Start/End: Original strand, 39354231 - 39354378
Alignment:
Q  151 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 242  Q
    ||||||||||||| | | |||||||||||||| ||||| |||| ||| |||||| ||||         ||| || ||||||||||| | |||||||||||    
T  39354231 tttttaaattacgcacattatgaaatatttttaaaaaaattaaaataataacataataatcgatcatgtaatacttcaatcacactaactttattttaga 39354330  T
Q  243 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
     ||||||||||||||    ||||||||||||  |||| ||||| ||||    
T  39354331 taaacatgttatataacttgtaatttaaaaaaaaaaagtaaactctcc 39354378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 887028 - 886958
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||| |||||||||||| |||| ||| |||||| ||  |||||||||||| ||||| ||| ||||||    
T  887028 tcaatcacacataatttattttaaaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctcc 886958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 2381125 - 2381174
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||    
T  2381125 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaa 2381174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 16713494 - 16713587
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 189  Q
    ||||||||| ||| ||  ||||| |||||||||||| ||||  ||| | |||| |||||||||||||| | | ||| ||||||||||| |||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaag 16713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 32503269 - 32503232
Alignment:
Q  220 aatcacacttaatttattttagaaaaacatgttatata 257  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  32503269 aatcatacttaatttattttagaaaaatatgttatata 32503232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 36046443 - 36046375
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  ||||| |||||||||||| ||| | ||||||||||  |||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaaggga-ggggaggtttacttttgttttttaaattacgga 36046375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||  ||||  ||||| ||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 6e-57; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 96 - 332
Target Start/End: Complemental strand, 54935311 - 54935070
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||| | ||||||||||||| ||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatca 54935212  T
Q  196 tattaacatgataaa---------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    |||||| ||||||||          || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  54935211 tattaatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaacc 54935112  T
Q  287 ctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||    |||||| ||||||||| ||||||  ||||||||||||||    
T  54935111 ctc----cccctcccttcccctcctaaaccctcaatccaaacacac 54935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 96 - 289
Target Start/End: Complemental strand, 27735987 - 27735786
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| |  |  ||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  196 tattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||||        || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  27735887 tattaacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccc 27735788  T
Q  288 tc 289  Q
    ||    
T  27735787 tc 27735786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 96 - 273
Target Start/End: Complemental strand, 45742132 - 45741947
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    |||||||||||||| |  ||||||| ||| |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45742132 ggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaaca 45742033  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||        |||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45742032 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaaa 45741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 113 - 332
Target Start/End: Original strand, 31348340 - 31348562
Alignment:
Q  113 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-- 210  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||      
T  31348340 agtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaaca 31348439  T
Q  211 ------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttc 304  Q
          ||| |  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||     |||    
T  31348440 atcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctccc-----ttc 31348534  T
Q  305 ccctcataaacctccaatccaaacacac 332  Q
    ||||| |||||   ||||||||||||||    
T  31348535 ccctcctaaactctcaatccaaacacac 31348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 91 - 333
Target Start/End: Original strand, 5730827 - 5731073
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  5730827 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 5730926  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||    
T  5730927 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaa----aaaagta 5731022  T
Q  283 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 333  Q
    || |   |||||||||| ||||||||| ||||||  |||| ||||||||||    
T  5731023 aaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacact 5731073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 90 - 332
Target Start/End: Complemental strand, 37711371 - 37711141
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 189  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||||| |||||||              
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatatt---------- 37711282  T
Q  190 ttaacatattaacatgataa-ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
      |||||  ||| ||||| | |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  37711281 --aacatgataa-atgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaaccct 37711185  T
Q  289 cctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    || ||||| || ||||||||| ||||||  ||||||||||||||    
T  37711184 cccctcccttcccttcccctcctaaaccctcaatccaaacacac 37711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 96 - 290
Target Start/End: Complemental strand, 54320676 - 54320474
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||||||  ||||||||||||||| ||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagca 54320577  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| ||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||  ||||||    
T  54320576 tattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgatatatagtcggtaatttaaaaaagaaaatcaaaccc 54320477  T
Q  288 tcc 290  Q
    |||    
T  54320476 tcc 54320474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 96 - 286
Target Start/End: Original strand, 49735470 - 49735668
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||||||||||||||| |  ||||||| | |||||||||||||||     
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacc 49735569  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||||||||||||||        |||| |  || ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  49735570 tattaacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaacc 49735668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 278
Target Start/End: Complemental strand, 41174587 - 41174397
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagca 41174488  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||||| ||||        |||| || ||||||||| || |||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  41174487 tattaacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaatttaaaaaagaaa 41174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 35248922 - 35248738
Alignment:
Q  102 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 201  Q
    ||||||||||  ||||||||| || ||||| ||||  |||||||||||| |||||||||| ||| |||    |||||||||| |||||||||| ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  202 catgataaataac--------acctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||||||||         || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35248822 catgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaa 35248738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 157 - 332
Target Start/End: Complemental strand, 26167118 - 26166940
Alignment:
Q  157 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaaca 248  Q
    ||||||||| ||| |||||| |||||| || |||||||||||||||||||||||        ||| || ||||||||||||||||||||||||| |||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaaca 26167019  T
Q  249 tgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||| |||||||||||| |||||| |||     ||||||||||  |||||||| ||||||  ||||||||||||||    
T  26167018 tgttatatagtctgtaatttaaaaaagaaaaacaaa-----ctctcccctccattcccctcctaaaccctcaatccaaacacac 26166940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 120 - 332
Target Start/End: Original strand, 1968377 - 1968600
Alignment:
Q  120 gaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat-tttttaa-------aaagttaacatattaacatgataaa- 210  Q
    ||||| |||||| ||||  |||||||||||| | |||||||| ||| |||||||||||| |||||||       |||||||||||||||||||||||||     
T  1968377 gagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaatatctttttaactttttaaaagttaacatattaacatgataaac 1968476  T
Q  211 -------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctctt 303  Q
           ||| || |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     |||| ||||| |||    
T  1968477 gatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatgaaaattaaa-----ctcttccctccctt 1968571  T
Q  304 cccctcataaacctccaatccaaacacac 332  Q
    |||||| ||||||  ||||||||||||||    
T  1968572 cccctcctaaaccctcaatccaaacacac 1968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 139 - 333
Target Start/End: Original strand, 46007744 - 46007943
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaata--ttttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacact 228  Q
    |||||||||||||||||||||||| || |  ||||||    ||||||||||||||||||||||||||||||||||        || || |||||| ||||    
T  46007744 gtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatctcact 46007843  T
Q  229 taatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaac 328  Q
    |||||||||||| ||||||| ||||||||||| | |||||||||| ||||| ||||||     |||||||| ||||||||| ||||||  ||||||||||    
T  46007844 taatttattttacaaaaacaagttatatagtctgcaatttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaac 46007938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 278
Target Start/End: Original strand, 24565348 - 24565536
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||| |||||||| ||||||    ||||  ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||     
T  24565348 ggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaact 24565447  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||| ||||||        |||| || |||||||| || |  ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  24565448 tattaacgtgataaacaaacatataatacttcaatcacgctca--ttattatagaaaaacatgttatatagcccgtaatttaaaaaagaaa 24565536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 285
Target Start/End: Complemental strand, 6891590 - 6891405
Alignment:
Q  108 tggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgat 207  Q
    |||| |||||||||||||||| || ||||  ||||  ||||| ||||||||||| ||| |||||||| | ||||| ||||| |||| ||| |||||| ||    
T  6891590 tggatagtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattat 6891491  T
Q  208 aaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    |||        ||| || |||||||||||||||||||||||||||||||||||||||| |  ||| |||||||| |||||||||||    
T  6891490 aaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaagaaaaataaac 6891405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 36151773 - 36151637
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 231  Q
    |||||||||||||||||||||| | | ||||  ||||  ||||||||| ||||||||||||||||||||||        ||| || ||||||||||||||    
T  36151773 tttacttttcatttttaaattatgaacactagaaaatgatttttaaaa-gttaacatattaacatgataaacgatcatataatacttcaatcacacttaa 36151675  T
Q  232 tttattttagaaaaacatgttatatagtccgtaattta 269  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36151674 tttattttagaaaaacatgttatatagtctgtaattta 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 597
Target Start/End: Complemental strand, 11960817 - 11960695
Alignment:
Q  478 aagagaaaattgcatttaccttccttgaggttttacttaatgacactcacaccccctttagtttgnnnnnnncatttacctcccctcgtgtttactttgt 577  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||| | |||||||| |||    
T  11960817 aagagaaaattacatttacctcccttgaggttttacttaatgacactcacaccccctctagttttaaaaaaacatttacctccccgcatgtttactctgt 11960718  T
Q  578 tagtcac---cgttaccaaactt 597  Q
    |||||||   |||||||||||||    
T  11960717 tagtcaccatcgttaccaaactt 11960695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 47433754 - 47433919
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaa 231  Q
    ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| ||||||      ||| | |||| || ||||||||||||||    
T  47433754 gtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacatataaacgatcatataatacttcaatcacacttaa 47433853  T
Q  232 tttattttagaaaaacatgtta-tatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||    
T  47433854 tttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctccc 47433919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 6938489 - 6938394
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 191  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  6938489 ggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 16400987 - 16400871
Alignment:
Q  151 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 242  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||        |||| || ||||||| | |||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttaga 16400888  T
Q  243 aaaacatgttatatagt 259  Q
    |||||||||| ||||||    
T  16400887 aaaacatgttgtatagt 16400871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 102 - 296
Target Start/End: Original strand, 17938115 - 17938318
Alignment:
Q  102 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 201  Q
    ||||||||||  |||||||||||||| ||| || |  ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| |||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  202 catgataa--------ataacacctcaatcacacttaatttattt-tagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctc 292  Q
    ||||||||        |||| || |||||||||||||||||||||  | ||||| ||||||||||||  |||||||||||| ||||| ||||| ||| ||    
T  17938215 catgataaacgatcatataatacttcaatcacacttaatttatttaaaaaaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatc 17938314  T
Q  293 tccc 296  Q
    ||||    
T  17938315 tccc 17938318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 29798478 - 29798291
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt-aacatgataa--------ataacacctcaatcacacttaattta 235  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| || ||||| ||||        |||| || |||||||||||| |||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgattta 29798379  T
Q  236 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        ||||||||||||||||||||| ||||||||||||  |||| ||||     || ||| ||||||||||||| ||||||  ||||||||||||||    
T  29798378 ----agaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaa-----ctatcctctctcttcccctcctaaaccatcaatccaaacacac 29798291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 34111003 - 34110933
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  34111003 gtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaa 34110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 284
Target Start/End: Complemental strand, 44784190 - 44784038
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 230  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| ||||  |||||||||||||| | |||||        ||| || |||||||||||||    
T  44784190 gtttacttttcgtttttaaattacgaacactacgaaatattttctaaac-gttaacatattaaccttataaacgatcatataatacttcaatcacactta 44784092  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    ||||| ||||||||||| |||||||| ||  |||||||||||| ||||| ||||    
T  44784091 atttactttagaaaaacctgttatatggtatgtaatttaaaaaagaaaagtaaa 44784038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 114 - 332
Target Start/End: Original strand, 21694910 - 21695129
Alignment:
Q  114 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 209  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| ||||  ||||||| || || | |||  || |||||||        
T  21694910 gtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgataatgat 21695009  T
Q  210 ---ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttccc 306  Q
       |||| || |||||||||||||||||| || | ||||| |  |||||| |||| ||||||||||  ||||| |||||||||| || |     ||||||    
T  21695010 catataatacttcaatcacacttaattta-ttaaaaaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttc-----cttccc 21695103  T
Q  307 ctcataaacctccaatccaaacacac 332  Q
    |||||||||| |||||||||||||||    
T  21695104 ctcataaacccccaatccaaacacac 21695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 260
Target Start/End: Complemental strand, 22659413 - 22659268
Alignment:
Q  115 tttaggaggggaagggatgggaatgtttacttttcattttt-aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 213  Q
    |||||||||  |||||| | || |||||||||||||||||| ||||||| || || || ||||||||||| |||| |||| |||||||||| ||||| ||    
T  22659413 tttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaacataataaacaa 22659314  T
Q  214 -cacctcaatcacacttaatttattttagaaaaacatgttatatagtc 260  Q
     ||  | |||  |||||||||| |||||| ||||||||||||||||||    
T  22659313 tcatattaat--cacttaatttcttttaggaaaacatgttatatagtc 22659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 2247854 - 2248042
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 236  Q
    ||||||||||||||||||||| | ||| |||| ||| ||||||  ||||| |||||| ||||||||        ||| || |||||||||| || ||| |    
T  2247854 ttttcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaacaattatataatacttcaatcacacatatttt-t 2247952  T
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||||||||||||||||||||| || |||||||||||| ||||| ||||     ||||||| || |||| |||| ||||||  ||||||||||||||    
T  2247953 tttagaaaaacatgttatata-tctgtaatttaaaaaagaaaagtaaa-----ctctcccttcacttctcctcctaaaccctcaatccaaacacac 2248042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 31348563 - 31348494
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 286
Target Start/End: Original strand, 45132517 - 45132695
Alignment:
Q  114 gtttaggaggggaagggatgggaatgtttacttttcat-----ttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgata 208  Q
    ||||||||| ||||| || ||||  |||||||||||||     |||||||||| | | |||| ||||| |||| ||||||||||||||||||| ||||||    
T  45132517 gtttaggagcggaagagaggggatggtttacttttcataatctttttaaattatgtacactacgaaatgtttt-taaaaagttaacatattaaaatgata 45132615  T
Q  209 a--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    |        |||| || ||||||||||||||||||||||      |||| ||||||||||||||||||||||| ||||| ||||||    
T  45132616 aacgatcatataatacttcaatcacacttaatttatttt------acatattatatagtccgtaatttaaaaaagaaaagtaaacc 45132695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 139 - 284
Target Start/End: Complemental strand, 28333003 - 28332850
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 230  Q
    ||||||||||  ||||||||||||  | |||| |||||||||| |||||  ||| ||||||||| || ||||        ||| || ||||||| |||||    
T  28333003 gtttactttttgtttttaaattaccaacactacgaaatattttctaaaacattagcatattaacctggtaaacgatcatataatacttcaatcatactta 28332904  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    ||||| ||||||||||| |||||||||||  |||||||||||| ||||| ||||    
T  28332903 atttactttagaaaaacctgttatatagtatgtaatttaaaaaagaaaagtaaa 28332850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 56135855 - 56135752
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 323  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||  |||||| ||||     |||||||| ||||||||| ||||||  |||||    
T  56135855 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaacc-----ctcccctcccttcccctcctaaaccctcaatc 56135761  T
Q  324 caaacacac 332  Q
    |||||||||    
T  56135760 caaacacac 56135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 2917095 - 2917150
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||| | |||||||||||||||| |||||||||||||||| ||||||||||    
T  2917095 tcaatcacaataaatttattttagaaaatcatgttatatagtccggaatttaaaaa 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 36278450 - 36278376
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 213  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||| ||| ||||| |||||| |||||||||||    
T  36278450 gtttagttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaatatgataaataa 36278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 1968601 - 1968532
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| || |  ||||| |||||||||||||||||||||    
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacgga 1968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 27735749 - 27735816
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||| ||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt 160  Q
    |||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 2248050 - 2247972
Alignment:
Q  89 gttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggata 167  Q
    |||| ||||||||||||||| ||  |||||||||| |||| || ||||  ||||||||||| |||||||||||| ||||    
T  2248050 gtttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacagata 2247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 54935241 - 54935310
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||||||||||||||||||||||||||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  54935241 gtccgtaatttaaaaatgaaaaataaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 54935310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 298
Target Start/End: Complemental strand, 55510407 - 55510202
Alignment:
Q  99 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 198  Q
    ||||||||||||| |||||| ||||| |||  ||| ||  |||||||||| |||||||||||||| | ||||| |||||||||  ||||| | || |||     
T  55510407 gtgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatattttaaaaaaattgaa-ataa 55510310  T
Q  199 taacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
     |||||||| |||        || || ||| ||||||||||||||||||| |||||||| ||| || |||  ||| ||||||||||||| |||  |||||    
T  55510309 caacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtctttaaattaaaaatgaaaagtaagtcctcc 55510210  T
Q  291 tctcccct 298  Q
     |||||||    
T  55510209 cctcccct 55510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 45132737 - 45132668
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||| || || |||||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacgga 45132668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 45911327 - 45911368
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttt 182  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  45911327 ttacttttcttttttaaattacggatactataaaatattttt 45911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 54576329 - 54576398
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  | ||||||||| |||||| ||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacgga 54576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 54935069 - 54935137
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||||| ||  ||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacg 54935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 31719966 - 31720028
Alignment:
Q  219 caatcacacttaatttattttagaaaa--acatgttatatagtccgtaatttaaaaatgaaaa 279  Q
    |||||||||||||||||||| | ||||  ||||||||||||||  |||||||||||| |||||    
T  31719966 caatcacacttaatttatttaaaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaa 31720028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 2247889 - 2247843
Alignment:
Q  244 aaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||| |||||  |||||||||||||||||||||||| ||||||||    
T  2247889 aaacattttataatgtccgtaatttaaaaatgaaaaatgaaccctcc 2247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 6938360 - 6938322
Alignment:
Q  251 ttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  6938360 ttatatagtccgtaatttaaaaaggaaaaataaatcctc 6938322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 27735901 - 27735947
Alignment:
Q  242 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |||||||| |||||  |||||||||||||||||||||||| ||||||    
T  27735901 aaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccct 27735947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 47433951 - 47433885
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    ||||||||||| | ||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    |||| ||||||||||||| ||  ||||| |||| ||||||||||||  ||||||||||  |||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 49735540 - 49735471
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||||||||| | ||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  49735540 gtccgtaatttaaaaatgaaaagtgaacc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 49735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 22921094 - 22921033
Alignment:
Q  218 tcaatcacactta-atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||  |||||||||||| ||||    
T  22921094 tcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaa 22921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 22970705 - 22970766
Alignment:
Q  218 tcaatcacactta-atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||  |||||||||||| ||||    
T  22970705 tcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaa 22970766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 34995157 - 34995108
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    |||||||||||||||||||||||||| | | || || |||||||||||||    
T  34995157 acacttaatttattttagaaaaacatttcacattgttcgtaatttaaaaa 34995108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 37761467 - 37761555
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta 184  Q
    ||||||||||||| || ||||||||||| ||| ||| || |  ||| |||||| |||||||||||||| | |  || ||||||||||||    
T  37761467 ggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatatttttta 37761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 6e-57; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 98 - 295
Target Start/End: Complemental strand, 8530039 - 8529834
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 197  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacata 8529940  T
Q  198 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    |||||||| |||        |||| || ||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| ||||| |||||||||    
T  8529939 ttaacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaagtaaaccctc 8529840  T
Q  290 ctctcc 295  Q
    | ||||    
T  8529839 ccctcc 8529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 96 - 288
Target Start/End: Original strand, 40094935 - 40095136
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaaca 40095034  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
     |||||||||||||        |||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||    
T  40095035 aattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaaacc 40095134  T
Q  287 ct 288  Q
    ||    
T  40095135 ct 40095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 96 - 332
Target Start/End: Complemental strand, 30010574 - 30010335
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  |||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaaca 30010475  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||| ||||        |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |     
T  30010474 tattaacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatc- 30010376  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  30010375 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 30010335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 91 - 332
Target Start/End: Complemental strand, 12234257 - 12234013
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagt 12234158  T
Q  191 taacatattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    || ||||||||||| ||        | || | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  12234157 tagcatattaacataatatatgatcatattatacatcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaatta 12234058  T
Q  283 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    | ||     || ||||| ||||||||| ||||||  ||||||||||||||    
T  12234057 agcc-----ctaccctcccttcccctcctaaaccctcaatccaaacacac 12234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 91 - 333
Target Start/End: Original strand, 38509891 - 38510136
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||| ||  ||||||||||||||||||  |||  ||| ||||||||||||||||||||||| |||||||||| | ||||||||| |    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaat 38509990  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    |||||| |||||| |||||        |||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||    
T  38509991 taacatcttaacacgataaacgataatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaacta 38510090  T
Q  283 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 333  Q
    ||||     |||||||| ||||||||| ||||||   ||||||||||||||    
T  38510091 aacc-----ctcccctcccttcccctcctaaacccttaatccaaacacact 38510136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 91 - 332
Target Start/End: Complemental strand, 41498652 - 41498407
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 189  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaag 41498553  T
Q  190 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaat 281  Q
    ||||||||||||||||||||        |||| || |||||||||||||| ||||  ||||||| ||||||| ||||| | ||||||||||| ||||| |    
T  41498552 ttaacatattaacatgataaacgatcatataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaacgaaaagt 41498453  T
Q  282 aaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  41498452 aaacc-----ctcccctcacttcccctcctaaaccctcaatccaaacacac 41498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 96 - 328
Target Start/End: Original strand, 2858934 - 2859169
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||  ||||||||| || |||||||||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaaca 2859033  T
Q  196 tattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    || | |||| |||||        ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||     
T  2859034 tacttacattataaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaacc- 2859132  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaac 328  Q
        |||||||| ||||||||| ||||||| ||||||||||    
T  2859133 ----ctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 142 - 332
Target Start/End: Original strand, 32951366 - 32951559
Alignment:
Q  142 tacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatt 233  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||        ||| || ||||||||||||||||    
T  32951366 tacttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatt 32951465  T
Q  234 tattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||     ||||||||| ||||| ||| |||||   ||||||||||||||    
T  32951466 tattttagaaaaacatgttctatagtccgtaatttaaaaacgaaaagtaaac-----tctcccctcccttcctctcctaaactctcaatccaaacacac 32951559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 96 - 332
Target Start/End: Original strand, 35349468 - 35349703
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| ||||||| |||  ||||  ||||||||||||||||||||||||||| |||  ||||| |||| |||||||||||||    
T  35349468 ggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacact--gaaatgttttataaaaagttaaca 35349563  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || ||||| || |||| ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||     
T  35349564 tattaacatgataaacaatcatataatacttcaataacccttagtttattttagaaaaaaatgttatatagtccgtaatttaaaaacgaaaagtaaacc- 35349662  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        |||||||| ||||||||||||||||   |||||||||||||    
T  35349663 ----ctcccctcccttcccctcataaacccttaatccaaacacac 35349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 146 - 295
Target Start/End: Original strand, 50744332 - 50744490
Alignment:
Q  146 tttcatttttaaattacggatactatgaaatattttttaaaa-agttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 236  Q
    |||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||||||||||||        ||| || |||||||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 50744431  T
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  50744432 tttagagaaacctgttatatagtccgtaatttaaaaaagaaaaacaaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 331
Target Start/End: Complemental strand, 51597866 - 51597672
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 231  Q
    ||||||||||| |||||||||| | | ||||||||||  ||||||||||||||||||||||| ||||||||        ||| || ||||||||||||||    
T  51597866 tttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaa 51597767  T
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 331  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||     |||||||||| |||||  |||||||||  |||||||||||||    
T  51597766 tttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaa-----ctctcccctcccttcctttcataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 10392072 - 10391912
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaacatattaacatgataaa--------taacacctcaatcacactt 229  Q
    ||||||||||| ||||||||||||  | | ||| |||| |||||| |||||||||||||||||||||||||||        ||| || | ||||||| ||    
T  10392072 gtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaatt 10391973  T
Q  230 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10391972 aatttattttagaaaaacatgtaatatagtccgtaatttaaaaatgaaaagtaaaccctcc 10391912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 49946633 - 49946791
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||        |||| || ||||||||| |||    
T  49946633 gtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacattta 49946732  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    |||||||||| |||||||||||||||||||  |  |||||| | ||||| |||||||||    
T  49946733 atttattttaaaaaaacatgttatatagtctctggtttaaacaagaaaagtaaaccctc 49946791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 139 - 294
Target Start/End: Complemental strand, 6563775 - 6563614
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-------taacacctcaatcacacttaa 231  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||       ||| |  ||||| |||| |||    
T  6563775 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 6563676  T
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 294  Q
    ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  6563675 tttattttagaaagacatgttatatagtctgtcatttaaaaaag-aaaataaaccctcctctc 6563614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 285
Target Start/End: Original strand, 45585739 - 45585884
Alignment:
Q  148 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatttt 239  Q
    ||||||||||||||  |||||||| |||| |||||| ||||||||||||||||||||||||||        ||  || || |||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T
Q  240 agaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    | ||||||||||||||||||||||||||| || | ||||| |||||    
T  45585839 aaaaaaacatgttatatagtccgtaattttaagaggaaaagtaaac 45585884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 91 - 210
Target Start/End: Original strand, 43551993 - 43552108
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| ||  ||||| |||||||||||||||||||     |||||||| |||||||||||||    
T  43551993 tttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacgt----tatgaaatgttttttaaaaagt 43552088  T
Q  191 taacatattaacatgataaa 210  Q
    ||||||||||||||||||||    
T  43552089 taacatattaacatgataaa 43552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 332
Target Start/End: Complemental strand, 26324112 - 26324017
Alignment:
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||||||||||  |||||||||||| |||||  ||||||||| |||||||| ||||||||| ||||||  ||||||||||||||    
T  26324112 tttagaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccctcccctcccttcccctcctaaaccctcaatccaaacacac 26324017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 20576136 - 20576247
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||||||| ||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||  |||||| ||||||||| |||||| ||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacac--tgaaatgttttttaaagagttaatat 20576233  T
Q  197 attaacatgataaa 210  Q
    ||||||||||||||    
T  20576234 attaacatgataaa 20576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 97 - 210
Target Start/End: Complemental strand, 7444736 - 7444623
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||||| | ||||||| | |||||| || ||||  ||||| |||||||||| |||||||||| ||||| ||||  ||||||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacat 7444637  T
Q  197 attaacatgataaa 210  Q
    |||||||| |||||    
T  7444636 attaacataataaa 7444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 279
Target Start/End: Original strand, 26940874 - 26941036
Alignment:
Q  125 gaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacac 216  Q
    |||| |||||||  ||| |||||| ||||||||||||  || |||||||||||||| || |||||||||| |||||||||  ||||        ||| ||    
T  26940874 gaagagatgggagggttcactttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaacatcgtaaacagtcatataatac 26940973  T
Q  217 ctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
     |||||||||||| ||||||||||||||||||||||||| | |||||| |||||||| |||||    
T  26940974 ttcaatcacacttgatttattttagaaaaacatgttatagaatccgtattttaaaaaagaaaa 26941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 36285619 - 36285741
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||| || |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||        |||| || ||||||||||||     
T  36285619 gtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttg 36285718  T
Q  231 atttattttagaaaaacatgtta 253  Q
    || ||||||| ||||||||||||    
T  36285719 atatattttaaaaaaacatgtta 36285741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 28770969 - 28770852
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 189  Q
    ||||| ||||||||||||||||| ||||||||||| || |||  |||  ||||| |||| |||||||||||||  | | |||||||| |||| ||||||     
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaa 28770872  T
Q  190 ttaacatattaacatgataa 209  Q
    ||||||||||||||||||||    
T  28770871 ttaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 32951566 - 32951491
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||| ||||||||||||| || |||||||||| |||||||| ||||  ||||||||||| |||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacgga 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 40964798 - 40964726
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaacatgataaa 210  Q
    ||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||||||||| |||||||    
T  40964798 gtttacttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaacgtgataaa 40964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 44211037 - 44211097
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||| ||||    
T  44211037 tcaatcacacttaatttattttagaaaaacacgttatatagactgtaatttataaaagaaa 44211097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 2470867 - 2470944
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    ||||||||| ||| | ||||||||||||||||||||||||||   ||||||||||| ||||| |||||| ||| ||||    
T  2470867 tcaatcacaattagtgtattttagaaaaacatgttatatagttgataatttaaaaaagaaaagtaaaccttcccctcc 2470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 41676480 - 41676363
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaa--aagttaacatattaacatgataa--------ataacacctcaatcacact 228  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||     || ||||||||||||||||||||        |||| ||  ||||||||||    
T  41676480 gtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaacgatcatataatactacaatcacact 41676381  T
Q  229 taatttattttagaaaaa 246  Q
    ||||||||||||||||||    
T  41676380 taatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 43553068 - 43553129
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgt-aatttaaaaatgaaaaataaa 284  Q
    ||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||| ||||    
T  43553068 acacttaatttattttagagaaacaagttatataatccgtaaatttaaaaatgaaaagtaaa 43553129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 2859169 - 2859105
Alignment:
Q  101 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacgga 2859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 23536777 - 23536844
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 158  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| |||||| |||||  |||||||    
T  23536777 tttatggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 35349709 - 35349635
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||| |||||||||||||  |  ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacgga 35349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 30010334 - 30010403
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacgga 30010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 41498406 - 41498471
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 2470727 - 2470819
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 183  Q
    |||| ||||||||||||||||  ||||||||||||||| ||  |||  ||||  ||| ||||||||||||||| | ||||| |||| ||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgtttttt 2470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 2506781 - 2506689
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 188  Q
    |||||||||||||||| ||||||| || |||||||| | ||    ||| ||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaa 2506689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 41676437 - 41676485
Alignment:
Q  242 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  41676437 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 41676485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    ||||||||||||||  |||||||||||||||||| ||||  | ||||||||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 10391893 - 10391943
Alignment:
Q  115 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  10391893 tttaggaggggaaacgaggggagggtttacttttcatttttaaattacgga 10391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 12233999 - 12234081
Alignment:
Q  83 atggttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||| ||| | ||||||||||||| ||  |||||||||||||||||| || |  | ||| ||||| |||||||||||||||    
T  12233999 atggttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacgga 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 12234182 - 12234251
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||||||||| |||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  12234182 gtccgtaatttaaaaatgaaaactaaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 12234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 38509966 - 38509928
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  38509966 gtccgtaatttaaaaatgaaaagtgaaccctcctctccc 38509928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 1085628 - 1085677
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||    
T  1085628 acacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaa 1085677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 20607459 - 20607410
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttact 145  Q
    ||||||||||||||||  |||||||||||||||||| ||||  |||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 25268510 - 25268437
Alignment:
Q  92 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||| | ||||||||||  |||||| |||||||| || ||||  ||||||||| | |||||||||||||||    
T  25268510 ttatggtatatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 40709294 - 40709391
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 193  Q
    |||||||||||||  || ||||| ||||||||||||  |||    ||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| ||||    
T  40709294 ggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 49946682 - 49946629
Alignment:
Q  236 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    ||||| ||||| || |||||  ||||||||||||||||||| ||||||||||||    
T  49946682 ttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 7444481 - 7444549
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||| |||| ||  |||| ||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 35349536 - 35349504
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||||||||||||| ||||||||||    
T  35349536 gtccgtaatttaaaaatgaaaagtaaaccctcc 35349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 38510135 - 38510067
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||  |  |||||||||||||||||| ||||  ||||| ||||| |||||||| ||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacgga 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 40095005 - 40094973
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||||||||||||| ||||||||||    
T  40095005 gtccgtaatttaaaaatgaaaagtaaaccctcc 40094973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 43552065 - 43552037
Alignment:
Q  261 cgtaatttaaaaatgaaaaataaaccctc 289  Q
    |||||||||||||||||||||||||||||    
T  43552065 cgtaatttaaaaatgaaaaataaaccctc 43552037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 49832659 - 49832583
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 294  Q
    ||||||||||||| ||||||||  |||||||  ||||||  || |||||||||||| ||||| ||| | ||||||||    
T  49832659 tcaatcacacttattttatttttaaaaaacactttatattatctgtaatttaaaaaagaaaagtaagctctcctctc 49832583  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 50135026 - 50135090
Alignment:
Q  477 aaagagaaaattgcatttaccttccttgaggttttacttaatgacactcacaccccctttagttt 541  Q
    |||||||||| | ||||||||| |||||||||||   | || |||||||||||||||| ||||||    
T  50135026 aaagagaaaactacatttacctcccttgaggtttgcttaaaagacactcacaccccctctagttt 50135090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 3e-56; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 96 - 332
Target Start/End: Complemental strand, 13634953 - 13634714
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaaca 13634854  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| |  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||     
T  13634853 tattaacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaacc- 13634755  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  13634754 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 13634714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 91 - 305
Target Start/End: Complemental strand, 7544383 - 7544161
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||  ||||  ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagt 7544284  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    || ||||||||||| ||||        |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  7544283 tagcatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaattt 7544184  T
Q  283 aaccctcctctcccctctcttcc 305  Q
    | |||||| ||||| || |||||    
T  7544183 agccctcccctcccttcccttcc 7544161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 91 - 296
Target Start/End: Complemental strand, 10650661 - 10650463
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagt 10650562  T
Q  191 taacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||| ||||||       || |||||||||||||||||||||||||||||||| | |||  ||||||||||||||||| |||| |||| |||||    
T  10650561 taacatattaccatgat-------acttcaatcacacttaatttattttagaaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcc 10650469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 96 - 301
Target Start/End: Complemental strand, 26415136 - 26414922
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 194  Q
    ||||||||||||||||  ||||| |||||| || ||| ||||  ||||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaac 26415037  T
Q  195 atattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||||||||||||||||        ||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  26415036 atattaacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaacgaaaagtaaacc 26414937  T
Q  287 ctcctctcccctctc 301  Q
    |||| ||||| ||||    
T  26414936 ctcccctcccttctc 26414922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 96 - 332
Target Start/End: Complemental strand, 16938721 - 16938482
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  |||||  ||||||||||||||||| || |||||||||| ||||||||| ||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaaca 16938622  T
Q  196 tattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    | ||||||||||||||        || |  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||     
T  16938621 tgttaacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacatgttatatagtccgtaacttaaaaaagaaaaacaaacc- 16938523  T
Q  288 tcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  16938522 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 16938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 96 - 268
Target Start/End: Original strand, 8502837 - 8503017
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| || ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8502837 ggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaaca 8502936  T
Q  196 tattaacatga--------taaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 268  Q
     ||||| ||||        || |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8502937 aattaatatgatacacaattacataatacttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 99 - 295
Target Start/End: Complemental strand, 36363271 - 36363067
Alignment:
Q  99 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 198  Q
    |||||||||||||  |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatat 36363172  T
Q  199 taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    || ||||||||        |||| || ||||| |||||| ||||||||||||||||||||||||||||| |||| |||||| | ||||| ||||| ||||    
T  36363171 tagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacatgttatatagtacgtagtttaaacaagaaaattaaactctcc 36363072  T
Q  291 tctcc 295  Q
     ||||    
T  36363071 cctcc 36363067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 289
Target Start/End: Original strand, 28279478 - 28279680
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||| ||| ||||| ||  | |||  |||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  28279478 ggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaaca 28279577  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||||||||||||||        |||| || ||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  28279578 tattaacatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaaacatgttatatattccataatttaaaaaggaaaagtaaacc 28279677  T
Q  287 ctc 289  Q
    |||    
T  28279678 ctc 28279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 146 - 295
Target Start/End: Complemental strand, 9857072 - 9856915
Alignment:
Q  146 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatt 237  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||        ||| || |||||||||||| |||||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttatt 9856973  T
Q  238 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||||    
T  9856972 ttagaaaaacatgttatatagtccttaatttaaaaaagaaaactaaactctcccctcc 9856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 96 - 296
Target Start/End: Complemental strand, 37607136 - 37606929
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37607136 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaaca 37607037  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || |||||||||  |||||||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| |    
T  37607036 tattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-ttatatagtccttaatttaaaaacgaaaagtaaactc 37606938  T
Q  288 tcctctccc 296  Q
    || ||||||    
T  37606937 tcatctccc 37606929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 4373611 - 4373770
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||        |||| |  |||||||||||||    
T  4373611 gtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaatgatcatataatatttcaatcacactta 4373710  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||  |||||| ||||||||||||||||||||||||| ||||| |||| |||||    
T  4373711 atttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctcc 4373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 91 - 289
Target Start/End: Complemental strand, 10476275 - 10476067
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| | ||||||||||||||   |||||||||||||| | |||||      
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaa 10476176  T
Q  191 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgt-tatatagtccgtaa-tttaaaaatgaaaaa 280  Q
     |||||||||| |||||||        |||| || |||||||||||||||||||||||||||||||||| |||||| || |||| |||||||| |||||     
T  10476175 aaacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaag 10476076  T
Q  281 taaaccctc 289  Q
    |||||||||    
T  10476075 taaaccctc 10476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 97 - 284
Target Start/End: Original strand, 9798615 - 9798810
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||||||||||   |||||||||  |||||||| ||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatat 9798714  T
Q  197 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
     ||||||||| ||        |||| || ||||||||| ||||||||||| |||||||||||||||||| || ||||||| |||| ||||| ||||    
T  9798715 tttaacatgaaaaacgatcatataatacttcaatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaaaagaaaagtaaa 9798810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 139 - 330
Target Start/End: Original strand, 36392195 - 36392388
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||        |||| || |||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacactta 36392294  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 330  Q
    || |||||||| |||| || ||||||||||||||||||||||| |||| |||||     | | || ||||||||||||| ||||||  ||||||||||||    
T  36392295 atctattttag-aaaatatattatatagtccgtaatttaaaaacgaaatataaa-----cacaccgctctcttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 139 - 284
Target Start/End: Original strand, 10072692 - 10072845
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||||||||||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  10072692 gtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 10072791  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||||||||||||||||||||||  ||| |||||||||||| ||||| ||||    
T  10072792 atttattttagaaaaacatgttataccgtcggtaatttaaaaaagaaaagtaaa 10072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 296
Target Start/End: Complemental strand, 37779345 - 37779139
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37779345 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaaca 37779246  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || |||||||||  |||||||||||| |||||||| ||| ||||||| ||||||||||| ||||| ||||| |    
T  37779245 tattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-tta-atagtccttaatttaaaaacgaaaagtaaactc 37779148  T
Q  288 tcctctccc 296  Q
    || ||||||    
T  37779147 tcatctccc 37779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 1658055 - 1657955
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaaca 1657956  T
Q  196 t 196  Q
    |    
T  1657955 t 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 14245090 - 14245204
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaaca 14245189  T
Q  196 tattaacatgataaa 210  Q
    |||||||||||||||    
T  14245190 tattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 285
Target Start/End: Complemental strand, 37551647 - 37551453
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37551647 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37551550  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||||||||||||        |||| || |||||||||| |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  37551549 tattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaacgaaaagtaaac 37551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 285
Target Start/End: Complemental strand, 37654477 - 37654283
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37654477 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37654380  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||||||||||||        |||| || |||||||||| |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  37654379 tattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaacgaaaagtaaac 37654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 145 - 299
Target Start/End: Original strand, 20146917 - 20147088
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatc----------aca 226  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||        |||| |  ||||||          |||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacacttaattaca 20147016  T
Q  227 cttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 299  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  20147017 cttaatttattttagaaaaacatg-tatataatccgtaatttaaaaatgaaaagtaaaccctcccttcccctc 20147088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 140 - 332
Target Start/End: Original strand, 16501836 - 16502033
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 231  Q
    |||| ||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||| ||||        |||| || | |||||||||| |    
T  16501836 tttagttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaatgatcatataaaactttaatcacacttga 16501935  T
Q  232 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 330  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||  |||| |||   |||    |||||||||| ||||| ||||||  ||||||||||||    
T  16501936 tttattttagaaaaaatatgatatatagtccgtaatttaaaaaataaaagtaatttctc----cccctctctttccctcctaaaccctcaatccaaacac 16502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 139 - 331
Target Start/End: Original strand, 2550397 - 2550592
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa-agttaacatattaacatgataaa--------taacacctcaatcacactt 229  Q
    |||||||||||||||||||||||| || ||||||| || |||||| ||| | |||| ||| || |||||||||        ||| || |||||||||| |    
T  2550397 gtttacttttcatttttaaattacagacactatgatatgtttttttaaacaattaaaataata-catgataaacaatcatataatacttcaatcacacgt 2550495  T
Q  230 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 329  Q
    |||||||| |||||||||||||||||||||||| |  ||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||||||||||    
T  2550496 aatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaaca 2550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 22022962 - 22022907
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22022962 tcaatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaa 22022907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 20513491 - 20513561
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    ||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| |||||||||    
T  20513491 tttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaa 20513561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 43607 - 43535
Alignment:
Q  139 gtttacttttcatttttaaa-ttacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  43607 gtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaacataataaa 43535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 11756987 - 11756917
Alignment:
Q  220 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||| |||| ||||    
T  11756987 aatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaaataaaaacaaactctcc 11756917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 17024270 - 17024393
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 231  Q
    ||||||||||||||||||||| | || | |||||||| || |||||||||||| ||||||||||||| ||        |||| || ||||||  ||||||    
T  17024270 tttacttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaa 17024369  T
Q  232 tttattttagaaaaacatgttata 255  Q
    ||||||||||||||||||||||||    
T  17024370 tttattttagaaaaacatgttata 17024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 22023568 - 22023495
Alignment:
Q  139 gtttacttttcatttttaaattacggatact-atgaaatattttttaaaaa-gttaacatattaacatgataaa 210  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  22023568 gtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaacatgataaa 22023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 32727822 - 32727893
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||||||   |||||||||||||||||||    
T  32727822 gtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaacatgataaa 32727893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 42681618 - 42681510
Alignment:
Q  173 aaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgta 264  Q
    |||||||||||||||| |||| ||| |||||||||||||        || || | ||||||||| || ||||||||||||||||||||||||||||||||    
T  42681618 aaatattttttaaaaaattaaaataataacatgataaatgatcatataatactttaatcacactaaaattattttagaaaaacatgttatatagtccgta 42681519  T
Q  265 atttaaaaa 273  Q
    ||| |||||    
T  42681518 attaaaaaa 42681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 14245288 - 14245202
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 182  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||||||||||||||||||| ||| |||||| |||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 11419303 - 11419360
Alignment:
Q  228 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||    
T  11419303 ttaatttattttagaaaaacatgttatataacccgtaatttaaaaaagaaaagtaaac 11419360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 14681581 - 14681520
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
    ||||||||| ||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  14681581 tcaatcacatttaatttattttaaaaaaacatgttatataatctgtaatttaaaaaagaaaa 14681520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 218 - 332
Target Start/End: Complemental strand, 40815408 - 40815300
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 317  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||   ||||||  | || ||||||||| |||| ||    
T  40815408 tcaatcacacttt-tttattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaa---tcctct--cttcccttcccctcctaaatct 40815315  T
Q  318 ccaatccaaacacac 332  Q
     ||||||||||||||    
T  40815314 tcaatccaaacacac 40815300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactat 171  Q
    |||||||||||||||  ||||| |||||||||||| ||||  |||||  |||||||||||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 39966084 - 39966150
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    ||||||||  ||||||||||| | ||||| |||||||||| |||||||||||||||| |||||||||    
T  39966084 tcaatcacgtttaatttatttaaaaaaaatatgttatataatccgtaatttaaaaataaaaaataaa 39966150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 13634713 - 13634782
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 13634782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 17780279 - 17780340
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatatt 199  Q
    |||||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  17780279 gtttacttttcagttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 26414895 - 26414964
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 4423404 - 4423336
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 213  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||| ||||||||| | ||||||||    
T  4423404 ttttcatttttaaattacgaacattatgaaatatttttttaaaatttagcatattaacgtaataaataa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 10650427 - 10650517
Alignment:
Q  94 atggtgtgtttggatggaaagtttaggaggggaa--gggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 182  Q
    |||||| |||||||||||   |||||||||||||  |||| ||||   ||||||||| |||||||||||||||| |||||||||| |||||    
T  10650427 atggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 34980812 - 34980879
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||||| ||| |||||||||||||||||| || |  ||| |||||| ||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacg 34980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 332
Target Start/End: Original strand, 1657969 - 1658054
Alignment:
Q  242 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  1657969 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 1658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 14245218 - 14245287
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||||||||||||||||||||||| |||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  14245218 gtccgtaatttaaaaatgaaaaacaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 14245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 11419237 - 11419302
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 204  Q
    |||||||||||||||| |||||| ||| | ||| |||| ||||| ||||||| |||||||||||||    
T  11419237 gtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaacat 11419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 2556215 - 2556167
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa 187  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  2556215 gtttacttttcatttttaaattatggatgatataaaatattttttaaaa 2556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 34980916 - 34980813
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 323  Q
    ||||||||||||||||| ||||| || |||  | || |||||||||||||| |||| | ||||     || ||||| ||||||||| ||||||| |||||    
T  34980916 acacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacc-----cttccctcccttcccctcctaaaccttcaatc 34980822  T
Q  324 caaacacac 332  Q
    |||||||||    
T  34980821 caaacacac 34980813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 43481 - 43410
Alignment:
Q  226 acttaatttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||||||||||| ||||| ||||||||||| ||| ||||||||||| || || |||| |||| ||||||    
T  43481 acttaatttattttaaaaaaaacatgttatataatccctaatttaaaaaagagaagtaaatcctcatctccc 43410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaa 157  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 14684614 - 14684692
Alignment:
Q  218 tcaatcacacttaatttattt--tagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 294  Q
    |||||||||||||||||||||   | |||||||| |||||| | |||||||| ||||| ||||| ||| ||||||||||    
T  14684614 tcaatcacacttaatttatttaaaaaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctc 14684692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 29002251 - 29002322
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    ||||||||||||||||||||||| | | ||||| |||| ||||||  |||   |||||||||||||||||||    
T  29002251 gtttacttttcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaa 29002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 8551621 - 8551659
Alignment:
Q  294 cccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  8551621 cccctctcttcccctcctaaaccttcaatccaaacacac 8551659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 10476028 - 10476090
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 158  Q
    |||||||||| || ||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 12600703 - 12600745
Alignment:
Q  292 ctcccctctcttcccctcataaacctccaatccaaacacactt 334  Q
    |||||||||||||||||| |||||||  |||||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacactt 12600745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 33744190 - 33744260
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    |||| ||||||||||||||||  ||| ||| || ||||||| ||||  ||||||||||| |||||||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 40815299 - 40815365
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    ||||||||||||| |||  ||||||||||||||||| | ||   |||||||||| ||||||||||||    
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 16938481 - 16938550
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| ||||||| |||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacgga 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 13298376 - 13298296
Alignment:
Q  220 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctct 300  Q
    ||||||||||||||||| ||  |||||| | |||||| ||||| |||||||||| ||||| |||   |||| |||||||||    
T  13298376 aatcacacttaatttatattgcaaaaacgttttatattgtccgcaatttaaaaaagaaaagtaagttctcccctcccctct 13298296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 6e-54; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 100 - 296
Target Start/End: Original strand, 31543078 - 31543282
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 199  Q
    ||||||||||||  ||||| |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatatt 31543177  T
Q  200 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 291  Q
    ||||| ||||        |||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||     
T  31543178 aacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaaagtaaaccctccc 31543277  T
Q  292 ctccc 296  Q
    |||||    
T  31543278 ctccc 31543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 102 - 301
Target Start/End: Original strand, 11575415 - 11575621
Alignment:
Q  102 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 201  Q
    ||||||||||   |||||||| |||||||| ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575415 tttggatggaggatttaggagaggaaggga-gggagggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaa 11575513  T
Q  202 catgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctct 293  Q
    ||||||||        |||| || | |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||| ||    
T  11575514 catgataaacgatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaaatgaaaagtaaaccctcccct 11575613  T
Q  294 cccctctc 301  Q
    ||| ||||    
T  11575614 cccttctc 11575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 97 - 290
Target Start/End: Complemental strand, 16653190 - 16652989
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||||| |  ||||| |||||||||||| | ||  ||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacat 16653091  T
Q  197 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |||||||  |||||        ||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  16653090 attaacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccct 16652991  T
Q  289 cc 290  Q
    ||    
T  16652990 cc 16652989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 11785768 - 11785561
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||||||||| ||| || ||||  ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  11785768 ggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagca 11785669  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || |||||| || ||||| |||||||||||||||||||||||||| | ||||||||||| ||||| ||||| |    
T  11785668 tattaacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaactc 11785569  T
Q  288 tcctctcc 295  Q
    ||| ||||    
T  11785568 tcccctcc 11785561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 1281341 - 1281184
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 231  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||        |||| || |||| ||||||| |    
T  1281341 tttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttga 1281242  T
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  1281241 tttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctc 1281184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 96 - 316
Target Start/End: Complemental strand, 31738665 - 31738442
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||  | ||||  |||||  |||||||||||||||||||| ||||| ||||||||||| || ||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaaca 31738566  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        |||| || ||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||  ||||| |||       
T  31738565 tattaacatgataaatgatcatataatacttcaattacacttaatttattctagagaaacatgttatatagtctgtaatttaaaaaaaaaaaaaaaa--- 31738469  T
Q  288 tcctctcccctctcttcccctcataaacc 316  Q
      ||||||| |||||||||||| ||||||    
T  31738468 --ctctcccttctcttcccctcctaaacc 31738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 139 - 305
Target Start/End: Original strand, 1026894 - 1027067
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||        |||| || ||||||| |||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 1026993  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcc 305  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||| | ||||| || |||||    
T  1026994 atttattttagaaaaacat-ttatatagtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcc 1027067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 139 - 299
Target Start/End: Original strand, 7502999 - 7503167
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 230  Q
    |||| |||| ||||||||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||        ||| || | |||||||||||    
T  7502999 gtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaacaatcatataatactttaatcacactta 7503098  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 299  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||    
T  7503099 atttattttagaaaaacatgttatataatccataatttaaaaacgaaaagtaaaccctcccctcccctc 7503167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 98 - 332
Target Start/End: Original strand, 30479721 - 30479958
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 197  Q
    ||||||||||||||   ||||||||||| | ||| ||||  ||| |||||||||||||||||||| || |||||||||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacata 30479820  T
Q  198 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    ||||  ||||||        |||| || |||||||||||| ||||||||||||||||||||  |||||||| ||| |||||||| ||||| |||||||||    
T  30479821 ttaaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacatgacatatagtctgtagtttaaaaaagaaaactaaaccctc 30479920  T
Q  290 ctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    | ||||      |||| ||||||||||  ||||||||||||||    
T  30479921 cgctcc-----attcctctcataaaccctcaatccaaacacac 30479958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 90 - 285
Target Start/End: Original strand, 3726859 - 3727054
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 189  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||  ||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatag 3726958  T
Q  190 ttaacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    |||||||  |||   |  | |||| |  |||||||  |||||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||    
T  3726959 ttaacatgataaacggtcatataatatttcaatcatgcttaatttattttagaaaaacatgttatatagtctgtaatctaaaaaagaaaagtaaac 3727054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 29358385 - 29358547
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 230  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||        ||| || |||||||||||||    
T  29358385 gtttactttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaacgatcctataatacttcaatcacactta 29358483  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa-taaaccctcctct 293  Q
    ||||||| |||||||| |||||||||| |||||| ||||||||||||||| ||||| |||||||    
T  29358484 atttattctagaaaaatatgttatataatccgtagtttaaaaatgaaaaagtaaacactcctct 29358547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 133 - 284
Target Start/End: Complemental strand, 30664566 - 30664407
Alignment:
Q  133 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 224  Q
    ||||||||||| |||||| |||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||||        |||| || |||||||    
T  30664566 gggaatgtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaacggttatataatacttcaatca 30664467  T
Q  225 cacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    ||||||||||||||| ||||||||||||||| |||| | |||||||||| ||||||||||    
T  30664466 cacttaatttatttttgaaaaacatgttataaagtctgcaatttaaaaaagaaaaataaa 30664407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 138 - 296
Target Start/End: Complemental strand, 7979340 - 7979174
Alignment:
Q  138 tgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac--------acctcaatcacactt 229  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||  ||||| ||||||||||||||||||         || |||||  |||||    
T  7979340 tgtttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataatcatataatacttcaattgcactt 7979241  T
Q  230 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  7979240 gatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcctctccc 7979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 34634385 - 34634277
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaaca 34634286  T
Q  196 tattaacat 204  Q
    |||||||||    
T  34634285 tattaacat 34634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 100 - 296
Target Start/End: Complemental strand, 36309081 - 36308876
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 199  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||| ||||||||||| | | | |||||||| |||| |||||| ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatatt 36308982  T
Q  200 aacatgataa--------ataacacctcaatcacacttaatttatttta-gaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||||||        |||| || ||||||||||||| |||||||||  |||||||||||||||||||  || ||||| || ||||||| ||||||||    
T  36308981 aacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaaacatgttatatagtctctagtttaacaaagaaaaatgaaccctcc 36308882  T
Q  291 tctccc 296  Q
     |||||    
T  36308881 cctccc 36308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 145 - 273
Target Start/End: Complemental strand, 6315255 - 6315119
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 236  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||| |||||||        ||| || |||||||||||||||||||    
T  6315255 ttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttat 6315156  T
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6315155 tttagaaaaacatgttatatagtccgtaattaaaaaa 6315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 139 - 288
Target Start/End: Original strand, 37923123 - 37923280
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||| |||||||||||||||        |||| |  | |||| ||||||    
T  37923123 gtttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcactta 37923222  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||    
T  37923223 atttattttagaaaaacatgttatatagtctgtaatttaaaaataaatattaaaccct 37923280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 97 - 292
Target Start/End: Complemental strand, 11033659 - 11033455
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaaca 195  Q
    |||| ||| ||||||  |||||||||| ||||||| | |||  ||||||||||| |||||||||| | ||| |||||||| |||||| ||||| ||||||    
T  11033659 gtgtctttagatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaaca 11033560  T
Q  196 tattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    |||||||||||||||        |||    |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||||||    
T  11033559 tattaacatgataaacgatcatataattattcaatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaaaagaaaagtaaaccc 11033460  T
Q  288 tcctc 292  Q
     ||||    
T  11033459 ccctc 11033455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 9718530 - 9718720
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 236  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||        |||| || ||||||||| |||||  ||    
T  9718530 ttttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaacaatcatataatacttcaatcacaattaatgaat 9718629  T
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||| |||||||||||| | ||||||||||| ||||| ||||     || ||||||| |||| |||| ||||||  ||||||||||||||    
T  9718630 tttagaaaaatatgttatatagttcataatttaaaaaagaaaagtaaa-----ctttcccctcccttctcctcctaaaccctcaatccaaacacac 9718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 156 - 290
Target Start/End: Complemental strand, 37032561 - 37032419
Alignment:
Q  156 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaac 247  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||| ||||||||        ||| || | ||||||||||||||||||||| ||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaac 37032462  T
Q  248 atgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||    
T  37032461 atgttatatagtctgtaatttaaaaaagaaaaataaactctcc 37032419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 332
Target Start/End: Complemental strand, 2248666 - 2248455
Alignment:
Q  124 ggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataaca 215  Q
    |||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||  |||        |||| |    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataata 2248567  T
Q  216 cctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaac 315  Q
       ||||||||||| |||||||||||||||||||||||||||  |||||||||||||| | ||| | ||     |||||||||| ||||||||| |||||    
T  2248566 ttccaatcacacttgatttattttagaaaaacatgttatataaaccgtaatttaaaaaaggaaattgaa-----ctctcccctcccttcccctcctaaac 2248472  T
Q  316 ctccaatccaaacacac 332  Q
       ||||||||||||||    
T  2248471 tctcaatccaaacacac 2248455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 96 - 289
Target Start/End: Original strand, 41103506 - 41103709
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa--ttacggatactatgaaatattttttaaaaagttaa 193  Q
    ||||||||||||||||  ||||||||||||||| || ||||  ||||  ||||| ||||||||  ||| ||| |||||||||  ||||| ||||| ||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaa 41103605  T
Q  194 catattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
     | | ||||||||||||        ||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||||    
T  41103606 aacaataacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaac 41103705  T
Q  286 cctc 289  Q
    ||||    
T  41103706 cctc 41103709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 146 - 280
Target Start/End: Complemental strand, 28083934 - 28083792
Alignment:
Q  146 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatt 237  Q
    |||| ||||||||||||||||||||||| || ||||||||| ||||||||| | |||||||||||        ||| ||  |||||||||||||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttatt 28083835  T
Q  238 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa 280  Q
    ||||| ||||||||||||| ||| |||||||||||| ||||||    
T  28083834 ttagagaaacatgttatattgtctgtaatttaaaaaagaaaaa 28083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 29690925 - 29691038
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||||| |||||||||||||  ||| || | ||  ||||||||||||||| |||  ||| ||||||| ||||||||||| |||||||||||||    
T  29690925 gtgtgtttggatgaaaagtttaggaggaaaagagacgagagagtttacttttcatttataacatactgatactaggaaatatttttaaaaaagttaacat 29691024  T
Q  197 attaacatgataaa 210  Q
    ||||||||||||||    
T  29691025 attaacatgataaa 29691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 96 - 285
Target Start/End: Original strand, 40990183 - 40990383
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt-acggatactatgaaatatttttt--aaaaagtta 192  Q
    ||||||||||||||||  |||| ||||  ||| ||| ||||  |||||  |||||||||| |||| |  || |||||||||| ||||||  ||| |||||    
T  40990183 ggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttttaaagagtta 40990282  T
Q  193 acatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||||||||||||||||        |||| || ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||    
T  40990283 acatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaa 40990382  T
Q  285 c 285  Q
    |    
T  40990383 c 40990383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 42650468 - 42650540
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  42650468 tcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacgaaaagtaaactctcc 42650540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 139 - 332
Target Start/End: Original strand, 4247563 - 4247761
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||| |||||||||||||| ||||||||        |||| || | ||||| |||||    
T  4247563 gtttactttttatttttaaattacggc-actttaaaatattttttaagaagttaacatattagcatgataaacgatcatataatacttaaatcatactta 4247661  T
Q  231 atttattttagaaaaacatgttatatagtccgtaattt-aaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 329  Q
    |||||||||| |||||||| |   ||| | | |||||| ||||| ||||| |||||||||||||  |||| ||||||||| ||||||| |||||||||||    
T  4247662 atttattttaaaaaaacatat--aataattcataatttaaaaaaagaaaagtaaaccctcctct-acctcccttcccctcctaaaccttcaatccaaaca 4247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 43732929 - 43732860
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 10028347 - 10028259
Alignment:
Q  114 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaa 201  Q
    ||||||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10028347 gtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaa 10028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 33922680 - 33922560
Alignment:
Q  178 ttttttaaaaagttaacatattaacatgataaataac--------acctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattta 269  Q
    ||||||||||||||||||||||| ||||||||| ||         || ||||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaattta 33922581  T
Q  270 aaaatgaaaaataaaccctcc 290  Q
    |||| ||||| ||||| ||||    
T  33922580 aaaaagaaaagtaaactctcc 33922560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 10028222 - 10028156
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||| ||||    
T  10028222 tcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaa 10028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 13405178 - 13405027
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagt----taacatattaacatgataaa--------taacacctcaatcacac 227  Q
    |||||||||||||||||||||||||| | ||  ||||||||||| ||||||    |||| |||||||||||||||        ||| |  ||||| | |     
T  13405178 tttacttttcatttttaaattacggacattaaaaaatatttttttaaaagtgaattaacgtattaacatgataaacgatcatataataattcaattatat 13405079  T
Q  228 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
     |||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  13405078 ataatttattttagaaaaacatgttatatagtctgttatttaaaaaagaaaa 13405027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 9718730 - 9718656
Alignment:
Q  87 ttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    |||||| | ||||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9718730 ttgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 1281149 - 1281214
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||| ||  |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacgga 1281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 16024394 - 16024327
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||||||||   ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacgga 16024327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    |||| ||||||||| ||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 35694828 - 35694862
Alignment:
Q  167 actatgaaatattttttaaaaagttaacatattaa 201  Q
    |||||||||||||||||||||||||||||||||||    
T  35694828 actatgaaatattttttaaaaagttaacatattaa 35694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 12022281 - 12022330
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  12022281 acacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaa 12022330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 2248454 - 2248522
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 164  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||||||||||||||    
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacgg 2248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 8815383 - 8815316
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||||| ||  |||||||||||| ||||| ||||  ||| |||||| ||||||||||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 24243052 - 24243164
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    |||||||||||||||| |||||| || ||||||||| ||||    |||||||||||||| ||||||| || ||||| |||| | ||||||||| || | |    
T  24243052 ggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatgtcttttaaaaa-ttgaaa 24243148  T
Q  196 tattaacatgataaat 211  Q
    || |||||||||||||    
T  24243149 taataacatgataaat 24243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 3726935 - 3726897
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  3726935 gtccgtaatttaaaaatgaaaaataaaccgtcctttccc 3726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 5562012 - 5562058
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaa 187  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaa 5562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 30365126 - 30365219
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 183  Q
    ||||| ||||||||||||| ||  |||||||||| ||| ||| ||||  ||| |||||| |||||||||||||| | |  || |||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttt 30365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 31543143 - 31543106
Alignment:
Q  259 tccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  31543143 tccgtaatttaaaaatgaaaagtaaaccctcccctccc 31543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 38198181 - 38198241
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
    |||||||||||||||| |||||| |||||||  |||||  ||| ||||||||||||||||||    
T  38198181 tcaatcacacttaattcatttta-aaaaacactttatagtgtctgtaatttaaaaatgaaaa 38198241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 42919912 - 42919879
Alignment:
Q  154 ttaaattacggatactatgaaatattttttaaaa 187  Q
    |||||||||||||||||| |||||||||||||||    
T  42919912 ttaaattacggatactataaaatattttttaaaa 42919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 7503202 - 7503126
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 166  Q
    ||||| ||||||||||||| ||   ||| |||||||| |||| ||||  ||||||||||| ||||||||||| ||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggat 7503126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    |||||||||||  |  |||||||| | ||||||| ||||  ||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 6e-54; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 96 - 296
Target Start/End: Original strand, 41496959 - 41497167
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||   ||||||||| |||||||||||||||| | || ||||| ||||||||||| ||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaaca 41497058  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 287  Q
    ||||||||||||||        ||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  41497059 tattaacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccc 41497158  T
Q  288 tcctctccc 296  Q
    ||| |||||    
T  41497159 tcccctccc 41497167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 139 - 333
Target Start/End: Original strand, 33655153 - 33655350
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 230  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacactta 33655252  T
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 330  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||     ||| |||||||||||||| ||||||  ||||||||||||    
T  33655253 atttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaacc-----ctcgcctctcttcccctcctaaaccctcaatccaaacac 33655347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 115 - 285
Target Start/End: Original strand, 24970187 - 24970364
Alignment:
Q  115 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa----- 209  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  24970187 tttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgat 24970285  T
Q  210 ---ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
       |||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  24970286 catataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaaagaaaaacaaac 24970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 96 - 296
Target Start/End: Complemental strand, 47391098 - 47390889
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaaca 47390999  T
Q  196 tattaacatgataa---------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||||||||||||||         |||| || ||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  47390998 tattaacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacc 47390899  T
Q  287 ctcctctccc 296  Q
    |||| |||||    
T  47390898 ctccactccc 47390889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 96 - 286
Target Start/End: Original strand, 40196534 - 40196732
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||| |||||||||||||  |||  ||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaaca 40196633  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 286  Q
    ||| ||| ||||||        |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||    
T  40196634 tatcaacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacaaaaagtaaacc 40196732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 140 - 295
Target Start/End: Original strand, 34235053 - 34235219
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 231  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34235053 tttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaa 34235152  T
Q  232 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataa--accctcctctcc 295  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||  ||||||||||||    
T  34235153 tttattttagaaaaaacatgttatataatccgtaatttaaaaatgaaaagtaaacaccctcctctcc 34235219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 97 - 288
Target Start/End: Complemental strand, 42306571 - 42306376
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    |||||||||||| ||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcat 42306472  T
Q  197 attaacatgataa----ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    |||||| | ||||    |||| ||  ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||  |||||||    
T  42306471 attaacctcataaacatataatactccaatcacgcttaatttattttagaaatacatgttatatagtcggtaatttaaaaaagaaaatcaaaccct 42306376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 91 - 332
Target Start/End: Original strand, 13770945 - 13771187
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||||   ||||||| | |||||||||||||||| ||||| ||||||| |  |||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaatattat--aaaaagt 13771042  T
Q  191 taacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 282  Q
    ||||||||||||||||||||        ||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||    
T  13771043 taacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagta 13771142  T
Q  283 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||     ||||| |||| ||||||||| ||||||  ||||| ||||||||    
T  13771143 aa-----ctctcacctcccttcccctcctaaaccctcaatctaaacacac 13771187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 114 - 332
Target Start/End: Complemental strand, 25887417 - 25887195
Alignment:
Q  114 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta-aaaagttaacatattaacatgataaa-- 210  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||| | |  ||||||| ||||||  ||||||||||||||||| ||||||||      
T  25887417 gtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaatatgataaaca 25887318  T
Q  211 ------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttc 304  Q
          ||| ||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |     |||||||| ||||    
T  25887317 atcatataatactccaatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaagaaaaacaaatc-----ctcccctcccttc 25887223  T
Q  305 ccctcataaacctccaatccaaacacac 332  Q
    ||||||||||||  ||||||||||||||    
T  25887222 ccctcataaaccctcaatccaaacacac 25887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 114 - 332
Target Start/End: Original strand, 1051520 - 1051739
Alignment:
Q  114 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--- 210  Q
    ||||||||||||||  || ||||  ||| || |||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||       
T  1051520 gtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatta-catgataaacaa 1051617  T
Q  211 -----taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcc 305  Q
         |||  | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||   ||||||  |||| |||||    
T  1051618 tcatataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaaaagaaaaataaa---tcctct--cctcccttcc 1051712  T
Q  306 cctcataaacctccaatccaaacacac 332  Q
    |||| ||||||  ||||||||||||||    
T  1051713 cctcctaaaccctcaatccaaacacac 1051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 290
Target Start/End: Complemental strand, 43230476 - 43230276
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||||| |  ||||| ||| |||| | | ||||  |||||||||| |||||||||||||||| ||| |||| | |||||| ||||||||||||    
T  43230476 gtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacat 43230378  T
Q  197 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    ||||||||||||||        |||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  43230377 attaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaaaagtaaaccct 43230278  T
Q  289 cc 290  Q
    ||    
T  43230277 cc 43230276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 18231828 - 18231714
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||   |||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaaca 18231729  T
Q  196 tattaacatgataaa 210  Q
    |||||||||||||||    
T  18231728 tattaacatgataaa 18231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 4833537 - 4833647
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 199  Q
    ||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctatt 4833636  T
Q  200 aacatgataaa 210  Q
    |||||||||||    
T  4833637 aacatgataaa 4833647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 329
Target Start/End: Complemental strand, 41008425 - 41008188
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt--taaaaa 188  Q
    |||| |||||||||||||| |  |||||||||||||||| |   ||  |||||| ||||||||||||||||||||||||||||  | ||| |  | ||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaa---ga--gtttacatttcatttttaaattacggatactatgatttttttgtcttcaaaa 41008331  T
Q  189 gttaacatattaacatgataaataac------acctcaatcacacttaatttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaat 281  Q
    |||||||||||||||||||||| ||       || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||     
T  41008330 gttaacatattaacatgataaacaatcatataacttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaagaaaaac 41008231  T
Q  282 aaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 329  Q
    |||      ||||||||| |||||||||  |||||  |||||||||||    
T  41008230 aaa-----ttctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 96 - 265
Target Start/End: Original strand, 45940658 - 45940835
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||| |||||| ||||||||||| || || |||||||||| ||||||| |||||||| |||||||||| ||||||| |||| ||  |    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagta 45940757  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaa 265  Q
    ||||||||| ||||        |||| || ||||| ||| ||||||||||||||||||| ||||||||||||| ||||    
T  45940758 tattaacataataagcgataatataatacttcaattacatttaatttattttagaaaaatatgttatatagtctgtaa 45940835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 332
Target Start/End: Original strand, 39856001 - 39856106
Alignment:
Q  222 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaa 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||    
T  39856001 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaa 39856095  T
Q  322 tccaaacacac 332  Q
    |||||||||||    
T  39856096 tccaaacacac 39856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 295
Target Start/End: Complemental strand, 17853067 - 17852906
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaat 232  Q
    |||||||||||||||||||||||   ||||||||| | ||||||||||| ||| |||  |||||||||||        ||| ||||||||||||||||||    
T  17853067 ttacttttcatttttaaattacgagcactatgaaa-agtttttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaat 17852969  T
Q  233 ttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||| ||| |||||| ||||    
T  17852968 ttattttagaaaaacatgttatttaatccgtaatttaaaaaagaaaagtaatccctcccctcc 17852906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 34228364 - 34228534
Alignment:
Q  140 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 231  Q
    |||||||| ||||||  ||||||||| ||||||||   ||| | |||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34228364 tttactttacattttgtaattacggacactatgaatgttttataaaaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaa 34228463  T
Q  232 tttattttagaaaaacatgttatatag-tccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 301  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||||    
T  34228464 tttattttagaaaaacatgttatatagttccgtaattttaaaatgaaaagtaaatcctcccctcccttctc 34228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 40572287 - 40572421
Alignment:
Q  146 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 237  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||        |||| || | |||||| |||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttt-aaaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttatt 40572385  T
Q  238 ttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||||| |||||| |||||||||||||||||| ||||    
T  40572386 ttagagaaacatattatatagtccgtaattttaaaa 40572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 10315872 - 10315761
Alignment:
Q  99 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 198  Q
    |||||||||||||| ||||||||||||||||||  ||    |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  10315872 gtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatat 10315773  T
Q  199 taacatgataaa 210  Q
    ||||| ||||||    
T  10315772 taacaagataaa 10315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 37417706 - 37417842
Alignment:
Q  167 actatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatag 258  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||        ||| || |||||||||||||| ||| ||| ||||||||||||||||||    
T  37417706 actatgaaatgttttctaaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttatatag 37417805  T
Q  259 tccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    ||||| ||||||||||||||| |||||| ||| ||||    
T  37417806 tccgttatttaaaaatgaaaagtaaaccatcccctcc 37417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 32872826 - 32872897
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  32872826 gtttacttttcttttttaaattacgaatattataaaatactttttaaaaagttaacatattaacatgataaa 32872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 13425122 - 13425236
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||| ||  |||||||||||||||| |  |||  ||||| |||| ||||||||||||| || ||||  ||||||||||| |||||| ||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaaca 13425221  T
Q  196 tattaacatgataaa 210  Q
    |||||||||||||||    
T  13425222 tattaacatgataaa 13425236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 22163167 - 22163272
Alignment:
Q  151 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 242  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22163265  T
Q  243 aaaacat 249  Q
    |||||||    
T  22163266 aaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 22221875 - 22221980
Alignment:
Q  151 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 242  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22221973  T
Q  243 aaaacat 249  Q
    |||||||    
T  22221974 aaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 333
Target Start/End: Complemental strand, 26366009 - 26365769
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 196  Q
    ||||||||||| |||  ||||| || |||||| || ||||  ||||  ||||| ||||||||||| ||||||||  |||||||||||  ||| |||| ||    
T  26366009 gtgtgtttggacggagggtttaagatgggaagagaggggatagtttgattttcgtttttaaattatggatactacaaaatattttttttaaaattaaaat 26365910  T
Q  197 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 288  Q
    | |||||||| |||        ||| || |||||||||| || ||||||||||||||| ||||||||||||  ||||| |||||| ||||| ||||| ||    
T  26365909 aataacatgagaaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagtaaactct 26365810  T
Q  289 cctctcccctctcttcccctcataaacctccaatccaaacacact 333  Q
    |  ||||| ||    |||||| ||||||  |||||||||||||||    
T  26365809 caactcccttc----cccctcctaaaccctcaatccaaacacact 26365769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 332
Target Start/End: Original strand, 31571600 - 31571711
Alignment:
Q  218 tcaatcacacttaat-ttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaac 315  Q
    ||||||||||||||| || ||||| ||||| |||||||||| |||||||||||||||| ||||| ||||     |||||||||| ||||||||| |||||    
T  31571600 tcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaa-----ctctcccctcgcttcccctcctaaac 31571694  T
Q  316 ctccaatccaaacacac 332  Q
    |  ||||||||||||||    
T  31571695 cctcaatccaaacacac 31571711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 48881560 - 48881646
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 182  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| | ||| ||||| ||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataatttt 48881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 23029480 - 23029537
Alignment:
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 289  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  23029480 tttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctc 23029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 39856107 - 39856038
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 39856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 36267555 - 36267635
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat 176  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||| ||||| ||||||||||||||||| ||| ||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaat 36267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 145 - 284
Target Start/End: Complemental strand, 42087188 - 42087041
Alignment:
Q  145 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 236  Q
    |||||||||||||||||||| || |||  ||  ||||||||||||||| ||||||||| ||| |||        ||| |  ||||| |||||||||||||    
T  42087188 ttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaatttat 42087089  T
Q  237 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 284  Q
    |||| || || |||||||||| | |||||||| |||| ||||||||||    
T  42087088 tttaaaataatatgttatataattcgtaattttaaaaagaaaaataaa 42087041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 31571712 - 31571643
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacgga 31571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 10315712 - 10315648
Alignment:
Q  231 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 295  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||||| |||| ||||| ||||    
T  10315712 atttattttagaaaaatatgttatatagtctgaaatttaaaaaagaaaagtaaatcctcccctcc 10315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 19835906 - 19835838
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 209  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||| |||| ||| |||||| ||||    
T  19835906 ttacttttcatttttaaattacggaaactataaaatgttctttaaaaaattaaaataataacatcataa 19835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 31553182 - 31553287
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 190  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||  ||  |||||| ||||| |||| ||||| | |||||||| |||||||||||||    
T  31553182 tttagggtgtgtttggatggag-gtttaggaggggaagggaggagagggtc-acttttaatttt-aaataacggacattatgaaatgttttttaaaaagt 31553278  T
Q  191 taacatatt 199  Q
    |||||||||    
T  31553279 taacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 273
Target Start/End: Complemental strand, 33519290 - 33519105
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| | |||||||||| || | ||| ||||  |||||| ||| || |      
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaat 33519191  T
Q  196 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    ||  ||||||||||        |||| || ||||  ||||||||||||||| | |||||||| |||||| || |||||||||||||    
T  33519190 taacaacatgataaatgatcatataatacttcaaaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaa 33519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 47229888 - 47229948
Alignment:
Q  150 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 210  Q
    ||||||||| ||||| || |||||||||||| ||||||||  |||||||||||||||||||    
T  47229888 atttttaaactacgggtattatgaaatatttcttaaaaagcgaacatattaacatgataaa 47229948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 48152092 - 48152036
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 278  Q
    ||||||||||| ||||||||||||||||||||||||||    |||||||||||||| ||||    
T  48152092 tcaatcacactaaatttattttagaaaaacatgttata----ccgtaatttaaaaaagaaa 48152036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 13771188 - 13771119
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||| ||| ||  |||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacgga 13771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 28074105 - 28074174
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    | ||||||| |||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 30592255 - 30592372
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 195  Q
    ||||| ||||||||||   |||||||||| |||||| ||||  | ||||||||| |||||||||||| || ||||| ||||  |||||||||| || | |    
T  30592255 ggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaa 30592354  T
Q  196 tattaacatgataaataa 213  Q
    || | | |||||||||||    
T  30592355 taatcatatgataaataa 30592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 34228561 - 34228492
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||| || ||| |||||||||| ||||||| ||||   ||||||||||||||| ||||||||||    
T  34228561 ggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacgga 34228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 38378165 - 38378096
Alignment:
Q  210 ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
    |||| |||||||| ||| || |||||||||  |||||||||||||||||| |||| |||||||| |||||    
T  38378165 ataatacctcaattacaattgatttatttttaaaaaacatgttatatagttcgtagtttaaaaaagaaaa 38378096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 40196619 - 40196566
Alignment:
Q  243 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 296  Q
    ||||||| |||||  |||||||||| ||||||||||| ||||||||||||||||    
T  40196619 aaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctccc 40196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 2087786 - 2087833
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaaa 188  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  2087786 ttacttttcttttttaaattacggatattataaaataatttttaaaaa 2087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 30891039 - 30891078
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatat 178  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  30891039 gtttacttttcatttttaaattacggacactataaaatat 30891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 37925843 - 37925910
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 163  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacg 37925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    |||| ||||||||||||| ||  | ||||||||||||||||  |||  ||||||||||| |||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 48013608 - 48013558
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaat 274  Q
    ||||||||||||||||| |||||||| ||| || || ||||||||||||||    
T  48013608 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaat 48013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 18795727 - 18795788
Alignment:
Q  218 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 279  Q
    ||||| |||||| |||| ||||| |||||||| |||||| || ||||||||||||| |||||    
T  18795727 tcaataacacttgatttgttttaaaaaaacattttatattgttcgtaatttaaaaaagaaaa 18795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 28074147 - 28074106
Alignment:
Q  291 tctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  28074147 tctcccctcccttcccctcctaaaccttcaatccaaacacac 28074106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 33655180 - 33655148
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    |||||||||||||||||||||| ||||||||||    
T  33655180 gtccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    |||||||||||| ||  ||||||||||||||| || | ||  ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 34235208 - 34235180
Alignment:
Q  138 tgtttacttttcatttttaaattacggat 166  Q
    |||||||||||||||||||||||||||||    
T  34235208 tgtttacttttcatttttaaattacggat 34235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 37925947 - 37925844
Alignment:
Q  224 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 323  Q
    ||||||||| ||||| | |||||||| ||| || || |||||||||||||  |||| | ||||     |||||||| ||||||||| ||||||  |||||    
T  37925947 acacttaatctatttaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaacc-----ctcccctcccttcccctcctaaaccctcaatc 37925853  T
Q  324 caaacacac 332  Q
    |||||||||    
T  37925852 caaacacac 37925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 104; Significance: 2e-51; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 90 - 296
Target Start/End: Original strand, 39182 - 39400
Alignment:
Q  90 ttttatggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 188  Q
    ||||| ||||||||||||||||  ||||||||||||||  ||  ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 39281  T
Q  189 gttaacatattaacatgataaat-aaca----------cctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaa 277  Q
    ||||||||||||||||||||||| | ||          | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  39282 gttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaa 39381  T
Q  278 aaataaaccctcctctccc 296  Q
    || |||||||||| |||||    
T  39382 aagtaaaccctcccctccc 39400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 39432 - 39363
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    ||||||||||||| ||  |||||| |||| |||||| ||||  ||||||||||| |||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacgga 39363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 39259 - 39189
Alignment:
Q  258 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 332  Q
    |||||||||||||||||||||| |||||||||    ||||||  |||||||| ||||||  | ||||||||||||    
T  39259 gtccgtaatttaaaaatgaaaagtaaaccctc----cccctcatttcccctcctaaaccctccatccaaacacac 39189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 16302 - 16500
Alignment:
Q  100 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 199  Q
    ||||||||||||  ||||||||||| || ||| ||||  ||||||||||||||||||||||| | | |||||||||| |||| ||||| |||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatatt 16401  T
Q  200 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 290  Q
    ||||||||||        |||| || ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  16402 aacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacatgttatatagtccgtgagttaaaaacgaaaagtaaaccctcc 16500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 115 - 285
Target Start/End: Complemental strand, 16173 - 15995
Alignment:
Q  115 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga-------- 206  Q
    ||||||||||||||||| |  |  ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||            
T  16173 tttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatgaaaaacaat 16074  T
Q  207 taaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 285  Q
    || | || || |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||| ||||| |||||    
T  16073 tataaaatacttcaatcacacataattttttttaaaaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaac 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 301
Target Start/End: Complemental strand, 6780 - 6613
Alignment:
Q  141 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaatt 233  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| ||||||||||      ||| | |||| || ||||||||||| ||||    
T  6780 ttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacatataaacgatcatataatacttcaatcacactaaatt 6681  T
Q  234 tattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 301  Q
    |||||||||| |||| ||||||||||| |||||||||||| ||||| |||||||||| ||||| ||||    
T  6680 tattttagaataacaagttatatagtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctc 6613  T

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Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  91 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    |||| ||||||||||||| |||  ||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0341 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 139 - 294
Target Start/End: Complemental strand, 18968 - 18807
Alignment:
Q  139 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-------taacacctcaatcacacttaa 231  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||       ||| |  ||||| |||| |||    
T  18968 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 18869  T
Q  232 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 294  Q
    ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  18868 tttattttagaaagacatgttatatagtctgtcatttaaaaaag-aaaataaaccctcctctc 18807  T

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Target: scaffold0294 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 93 - 273
Target Start/End: Complemental strand, 15507 - 15320
Alignment:
Q  93 tatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtta 192  Q
    |||||||||||||||||||  |||||||| |||||||||   ||   | ||||||| |||||||||||||||| |||||||| | |||||||||| || |    
T  15507 tatggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatgaa-tgttttttaaaaggtca 15409  T
Q  193 acatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 273  Q
    |||||||||| |||||||        ||| || |||| |||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  15408 acatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacatgttatgtaatccgtagtttaaaaa 15320  T

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Target: scaffold0026 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 133 - 333
Target Start/End: Complemental strand, 1377 - 1174
Alignment:
Q  133 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa------------taacacctca 220  Q
    ||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||  |||||||||            ||| || |||    
T  1377 gggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaacgatcatatatataatacttca 1278  T
Q  221 atcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctcca 320  Q
     ||| |||||||||    ||||| ||||||||| ||||||||||||||||||| ||||| ||||     |||||||||||||||||||| ||||||  ||    
T  1277 gtcatacttaattt----tagaataacatgttacatagtccgtaatttaaaaaagaaaagtaaa-----ctctcccctctcttcccctcctaaaccctca 1187  T
Q  321 atccaaacacact 333  Q
    |||||||||||||    
T  1186 atccaaacacact 1174  T

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Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 1175 - 1243
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 165  Q
    |||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacgga 1243  T

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Target: scaffold0198 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  97 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 182  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||||||||| |||||||||||| || |||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 242456 - 242366
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 188  Q
    ||||||||||||||  |||||  ||||||||||| ||||  ||||||||||| ||||||||||||||| | ||| ||||  ||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaa 242366  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 17780 - 17716
Alignment:
Q  96 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 162  Q
    ||||||||||||||||  ||||||||| |||||||| |||   ||||||||||| ||||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattac 17716  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  98 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 161  Q
    ||||||||||||||  ||||||||||| |||||| ||||  ||||||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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