View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8995_low_4 (Length: 775)
Name: NF8995_low_4
Description: NF8995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8995_low_4 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 434; Significance: 0; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 233 - 751
Target Start/End: Original strand, 36198962 - 36199481
Alignment:
| Q |
233 |
ttggaagagaatcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacctccaaacttgt------agatgtgagcaa |
326 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||||| ||||||||||||||||| | ||||||| |||||||||||| |||||||||||| |
|
|
| T |
36198962 |
ttggaagataatcatgtcatgtct-----agttgtatcaagttatgaaccttcatttgtttggataaaatctccaaacttgtagttgtagatgtgagcaa |
36199056 |
T |
|
| Q |
327 |
tatcttgcaaccattatgatcttcaccaaaggggataccaatcttactaaaatcaagtctaccataaagatcatacactacaactaggactgtttgcagc |
426 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36199057 |
tatcttgcaaccattatgatcttcaccaaaggggataccaatcttacttaaatcaagtctaccataaagatcatacactacaactaggactgtttgcagc |
36199156 |
T |
|
| Q |
427 |
tctttcatcttagcacacagaagaagagctctttctgtagttgtcaatcttttattattaacaaaacacatgcaacaagtagattcagctatatctgtcg |
526 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36199157 |
tctttcatcttagcacacagaagaagagctctttctgtagttgtcaatcttttattattaacaaaacacatgcaacaagtagattcagctatatctgtcg |
36199256 |
T |
|
| Q |
527 |
tatcatcaaaattcagacctattgcatccccgattagtgtttgacatctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctc |
626 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
36199257 |
tatcatcaaaattcagacctattgcatccccgattagtgtttgacatctttgtcacagttgttgtgacaatcttttggaacaattgatctctctcggctc |
36199356 |
T |
|
| Q |
627 |
ttcttatgacggttttcatacaagccttgactcttttatctagaccacatagtccgattaaattttctccttaaccctatcattgttaggaatgtaaatg |
726 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36199357 |
ttcttatgacggttttcatataagccttgactcttttatctagaccacatagtccgattaaattttctccttaaccctatcattgttaggaatgtaaatg |
36199456 |
T |
|
| Q |
727 |
tccggaaaataagtccctgcaatat |
751 |
Q |
| |
|
||||||||||||| ||||||||||| |
|
|
| T |
36199457 |
tccggaaaataagcccctgcaatat |
36199481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 17 - 698
Target Start/End: Original strand, 36196598 - 36197293
Alignment:
| Q |
17 |
agacgaaattactgcaagaaacaggggaaatcttaccataatggatacatgtctcggatataatacaaacacaagcatttgacagaatacaaaatcttag |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196598 |
agacgaaattactgcaagaaacaggggaaatcttaccataatggatacatgtctcggatataatacaaacacaagcatttgacagaatacaaaatcttag |
36196697 |
T |
|
| Q |
117 |
ttcatctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgattttcatcatctct |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196698 |
ttcatctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgattttcatcatctct |
36196797 |
T |
|
| Q |
217 |
gctacaaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacctccaaacttgtag |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196798 |
gctacaaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacctccaaacttgtag |
36196897 |
T |
|
| Q |
317 |
atgtgagcaatatcttgcaaccattatgatcttcaccaaagggg---ataccaatcttactaaaatcaagtctaccataaagatcatacactacaactag |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||| ||||| ||| ||||||||||| ||||||||| |
|
|
| T |
36196898 |
atgtgagcaatatcttgcaaccattatgatcttcaccaaagggggggataccaatctcacctaaatcgagtctcccacgaagatcatacagtacaactag |
36196997 |
T |
|
| Q |
414 |
gactgtttgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaatcttttattattaacaaaacacatgcaacaagtagattca |
513 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||||| ||||| || |||||| ||||| ||||| ||||||||||||| |||||| |
|
|
| T |
36196998 |
gactgtttgcagctctttcatcttagcacacaaaagatgagctctttctgcagttgccattctttttctattaccaaaaaacatgcaacaagttgattca |
36197097 |
T |
|
| Q |
514 |
gctatatctgtcgtatcatcaaaattcagacctattgcatccccgattagtgtttga-----------------catctttgtcacagttgttgtgacaa |
596 |
Q |
| |
|
||| ||| ||| |||||||||||| |||||||||| || |||||||||||| | ||||||||||||||| |||||||| |
|
|
| T |
36197098 |
gctggatccgtcttatcatcaaaat------ctattgcatcaccaattagtgtttgaatctttgtaatgtctggcttctttgtcacagttgctgtgacaa |
36197191 |
T |
|
| Q |
597 |
tcttttggaacaatagatctgtctcggctcttcttatgacggttttcatacaagccttgactcttttatctagaccacatagtccgattaaattttctcc |
696 |
Q |
| |
|
|||||||||| ||| ||||| |||| ||||||||||| | ||||| | || |||||||||||| ||| | ||||||| ||| || | ||||||||| |
|
|
| T |
36197192 |
tcttttggaataattgatctctctcagctcttcttatagctgtttttgcagaatgcttgactcttttttctggcccacataatccaatgatattttctcc |
36197291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 21 - 487
Target Start/End: Original strand, 36188285 - 36188750
Alignment:
| Q |
21 |
gaaattactgcaagaaacaggggaaatcttaccataatggatacatgtctcggatataatacaaacacaagcatttgacagaatacaaaatcttagttca |
120 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36188285 |
gaaattactgcaagaaaaaggg-aaatcttaccataatggatacatgtctcggatataatacaaacacaagcatttgacagaatacaaaatcttagttca |
36188383 |
T |
|
| Q |
121 |
tctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgattttcatcatctctgcta |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36188384 |
tctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgattttcatcatctctgcta |
36188483 |
T |
|
| Q |
221 |
caaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacctccaaacttgtagatgt |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36188484 |
caaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacctccaaacttgtagatgt |
36188583 |
T |
|
| Q |
321 |
gagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatcttactaaaatcaagtctaccataaagatcatacactacaactaggactgtt |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
36188584 |
gagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatctctcctaaattgagtcgaccatgaagatcatacattacaatcaggactgtt |
36188683 |
T |
|
| Q |
421 |
tgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaatcttttattattaa |
487 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||| |||| ||| ||||||| |||||| |
|
|
| T |
36188684 |
tgcagctctttcatcttagcacaaagaagatcagctctttctgcagttatcattcttttactattaa |
36188750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 21 - 553
Target Start/End: Original strand, 36209726 - 36210249
Alignment:
| Q |
21 |
gaaattactgcaagaaacaggggaaatcttaccataatggatacatgtctcggatataatacaaacacaagcatttgacagaatacaaaatcttagttca |
120 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209726 |
gaaattactgcaagaaacaagggaaatcttaccataatggatacatgtatcggacataatacaaacacaagcatttgacagaatacaaaatcttagttca |
36209825 |
T |
|
| Q |
121 |
tctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgattttcatcatctctgcta |
220 |
Q |
| |
|
|||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
36209826 |
tctataactgcaaa-gcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttcgacttcagattttcatcatctctgcta |
36209924 |
T |
|
| Q |
221 |
caaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacctccaaacttgtagatgt |
320 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
36209925 |
caaacgctcttgttggaagaaaatcatgccatgtctct--------tatcaatttatgaaccttcatttgcttggataaaacctccaaacttgtagatgt |
36210016 |
T |
|
| Q |
321 |
gagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatcttactaaaatcaagtctaccataaagatcatacactacaactaggactgtt |
420 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
36210017 |
cagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatctctcctaaattgagtcgaccatgaagatcatacattacaatcaggactgtt |
36210116 |
T |
|
| Q |
421 |
tgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaatcttttattattaacaaaacacatgcaacaagtagattcagctatat |
520 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||| |||| ||| ||||||| ||||| |||||| | |||||| ||| ||| | |||| || |
|
|
| T |
36210117 |
tgcagctctttcatcttagcacaaagaagatcagctctttctgcagttatcattcttttactattaccaaaacgcgtgcaaccagttgatacggctacat |
36210216 |
T |
|
| Q |
521 |
ctgtcgtatcatcaaaattcagacctattgcat |
553 |
Q |
| |
|
||| |||||| |||||| ||||||||||||| |
|
|
| T |
36210217 |
acgtcttatcattaaaattgagacctattgcat |
36210249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 80 - 552
Target Start/End: Original strand, 36207688 - 36208161
Alignment:
| Q |
80 |
tacaaacacaagcatttgacagaata-caaaatcttagttcatctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaa |
178 |
Q |
| |
|
||||| ||||||||||| |||||| | |||||||||||||||| || | | ||||| ||| | | |||||||||||||||||||||||||||||| | | |
|
|
| T |
36207688 |
tacaagcacaagcatttaacagaaaaacaaaatcttagttcatatacaacaacaaat-cacatgtgaacctctaatctctccaacatggtgttttcgata |
36207786 |
T |
|
| Q |
179 |
cgatgtgcatgtttggacttatgattttcatcatctctgctacaaacgctcttgttggaagagaa-tcatgtcatgtctctcacaattgtatcaatttat |
277 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||| || | ||| | || |||||||||||| ||||||||||||||| | |||||||| ||||||| |
|
|
| T |
36207787 |
tgatgtgcatgtttggacttcaaattttcatcaactctacttctaacacactggttggaagagaaatcatgtcatgtctctgataattgtattaatttat |
36207886 |
T |
|
| Q |
278 |
gaaccttcatttgctcagataaaacctccaaacttgtagatgtgagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatcttactaaa |
377 |
Q |
| |
|
||||||||| || | |||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
36207887 |
caaccttcatatgtttggataaagcctccgagcttgtagatgtcagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatctcacctaa |
36207986 |
T |
|
| Q |
378 |
atcaagtctaccataaagatcatacactacaactaggactgtttgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaatctt |
477 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
36207987 |
atcaagtctaccatgaagatcatacagtacaactagtactgtttgcagtttctttatcttagcacacagaagaagagctctttctgcagttgtcattctt |
36208086 |
T |
|
| Q |
478 |
ttattattaacaaaacacatgcaacaagtagattcagctatatctgtcgtatcatcaaaattcagacctattgca |
552 |
Q |
| |
|
|| |||||| || |||||| |||||||| | ||||| || ||| || |||||||||||||||||||||||||| |
|
|
| T |
36208087 |
ttgttattaccataacacacgcaacaagatgtttcagatagatcgatcttatcatcaaaattcagacctattgca |
36208161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 173 - 570
Target Start/End: Original strand, 36202310 - 36202707
Alignment:
| Q |
173 |
tccaaacgatgtgcatgtttggacttatgattttcatcatctctgctacaaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaa |
272 |
Q |
| |
|
||||||| |||| ||||||| ||||| ||||||||||||||||||| |||||||||| || ||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
36202310 |
tccaaactatgttcatgtttcgacttcagattttcatcatctctgcttcaaacgctctagtaagaagagattcatttcatgtctctgacaattgtatcaa |
36202409 |
T |
|
| Q |
273 |
tttatgaaccttcatttgctcagataaaacctccaaacttgtagatgtgagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatctta |
372 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| | | |
|
|
| T |
36202410 |
tttatgaaccttcatttctttggataaaacctccaaatttgtagatgtcagcaatatcttgcaacccttatgatcttcaccaaagggcataccaatttca |
36202509 |
T |
|
| Q |
373 |
ctaaaatcaagtctaccataaagatcatacactacaactaggactgtttgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtca |
472 |
Q |
| |
|
|| |||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| | | |
|
|
| T |
36202510 |
cttaaatcaagtctaccatggagatcatacattacaactaggactgtttgcagctccttcatcttagcacacagtagaagagctctttctgcagttctta |
36202609 |
T |
|
| Q |
473 |
atcttttattattaacaaaacacatgcaacaagtagattcagctatatctgtcgtatcatcaaaattcagacctattgcatccccgattagtgtttga |
570 |
Q |
| |
|
|||||| |||||| | || |||||||||| | |||||||||| ||| || |||||||||||||||||| ||||||||| || ||| |||||||| |
|
|
| T |
36202610 |
ttcttttgttattaccgtaagacatgcaacaggatgattcagctagatcaatcttatcatcaaaattcagacatattgcatcaccaatttgtgtttga |
36202707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 80 - 552
Target Start/End: Original strand, 36184500 - 36184977
Alignment:
| Q |
80 |
tacaaacacaagcatttgacagaata-caaaatcttagttcatctatacctacaaaagcacttctcaac----ctctaatctctccaacatggtgttttc |
174 |
Q |
| |
|
||||| ||||||||||| |||||| | ||||||||||||||||||| | | || ||||||||| | ||| ||||||||||||||||||||||| ||| |
|
|
| T |
36184500 |
tacaagcacaagcatttaacagaaaaacaaaatcttagttcatctacaacaac-aaagcacttgtgaacctctctctaatctctccaacatggtgtcttc |
36184598 |
T |
|
| Q |
175 |
caaacgatgtgcatgtttggacttatgattttcatcatctctgctacaaacgctcttgttggaag-agaatcatgtcatgtctctcacaattgtatcaat |
273 |
Q |
| |
|
| | ||| | ||||||||||||| ||||||||||| ||||||| | ||| |||| |||||||| | ||||||||||||||||| | |||||||||| | |
|
|
| T |
36184599 |
cgtatgatattcatgtttggacttcagattttcatcaactctgcttctaacactctagttggaagaaaaatcatgtcatgtctctgataattgtatcact |
36184698 |
T |
|
| Q |
274 |
ttatgaaccttcatttgctcagataaaacctccaaacttgtagatgtgagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatcttac |
373 |
Q |
| |
|
|||| ||||||||| || | ||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
36184699 |
ttatcaaccttcatatgtttggataatgcctccgagcttgttgatgtgagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatctcac |
36184798 |
T |
|
| Q |
374 |
taaaatcaagtctaccataaagatcatacactacaactaggactgtttgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaa |
473 |
Q |
| |
|
|||||||||||||||| ||||||| ||| ||||||||| ||||||||||| || || |||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
36184799 |
ctaaatcaagtctaccatgaagatcacacaatacaactagtactgtttgcagttcctttatcttagcgcacagaagaagagctctttctgcagttgtcat |
36184898 |
T |
|
| Q |
474 |
tcttttattattaacaaaacacatgcaacaagtagattcagctatatctgtcgtatcatcaaaattcagacctattgca |
552 |
Q |
| |
|
|||||| |||||| || |||||| |||||||| | ||||| || ||| || |||||||||||||||||||||||||| |
|
|
| T |
36184899 |
tcttttgttattaccataacacacgcaacaagatgtttcagatagatcgatcttatcatcaaaattcagacctattgca |
36184977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 180 - 570
Target Start/End: Original strand, 36213218 - 36213608
Alignment:
| Q |
180 |
gatgtgcatgtttggacttatgattttcatcatctctgctacaaacgctcttgttggaagagaatcatgtcatgtctctcacaattgtatcaatttatga |
279 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||| ||||| || | ||| ||||||||||||||||||||||| | ||||| |||||||||||| |
|
|
| T |
36213218 |
gatgtgcatgtttggacttcaaatttttatcaactctgcttcaaacactttagtttgaagagaatcatgtcatgtctctgataattgaatcaatttatga |
36213317 |
T |
|
| Q |
280 |
accttcatttgctcagataaaacctccaaacttgtagatgtgagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatcttactaaaat |
379 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |||| |
|
|
| T |
36213318 |
gccttcatttgattggataaaacctccacacttgtagatgtgagtaatatcttgcaaccattatgatcttcaccaaaggggacaccaatctcacctaaat |
36213417 |
T |
|
| Q |
380 |
caagtctaccataaagatcatacactacaactaggactgtttgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaatctttt |
479 |
Q |
| |
|
| ||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||| | |||| |
|
|
| T |
36213418 |
cgagtctcccatgaagatcatacattacaatcaggactgtttgcagctctttcatcttagcacaaataagatgagctctttctgcagttgtcactgtttt |
36213517 |
T |
|
| Q |
480 |
attattaacaaaacacatgcaacaagtagattcagctatatctgtcgtatcatcaaaattcagacctattgcatccccgattagtgtttga |
570 |
Q |
| |
|
| ||||| ||||||||||||||||||| ||||| |||| || || |||||| |||||| |||||||||||||| || ||| |||||||| |
|
|
| T |
36213518 |
actattaccaaaacacatgcaacaagttgattcggctacattcatcttatcattaaaattgagacctattgcatcaccaatttgtgtttga |
36213608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 105 - 554
Target Start/End: Original strand, 36200857 - 36201306
Alignment:
| Q |
105 |
acaaaatcttagttcatctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgatt |
204 |
Q |
| |
|
|||||||||||||||||||| ||| ||| | |||| | |||||| |||||| ||||||||||||| |||||| | |||||||||||||| ||| || |
|
|
| T |
36200857 |
acaaaatcttagttcatctacaccaacaca-gcacctgtcaaccactaatcactccaacatggtgctttccatatgatgtgcatgtttgaactacaagtt |
36200955 |
T |
|
| Q |
205 |
ttcatcatctctgctacaaacgctcttgttggaagagaa-tcatgtcatgtctctcacaattgtatcaatttatgaaccttcatttgctcagataaaacc |
303 |
Q |
| |
|
||| ||| ||||||| ||||| ||| || |||| |||| |||| |||||||||| | || ||| ||||||||||||| ||||||| || ||||||||| |
|
|
| T |
36200956 |
ttcgtcaactctgcttcaaacagtctagtaggaaaagaaatcatatcatgtctctgataactgtgtcaatttatgaactgtcatttgttcggataaaacc |
36201055 |
T |
|
| Q |
304 |
tccaaacttgtagatgtgagcaatatcttgcaaccattatgatcttcaccaaaggggataccaatcttactaaaatcaagtctaccataaagatcataca |
403 |
Q |
| |
|
|||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||| ||||||||||| |
|
|
| T |
36201056 |
tccacacttttaggtgtgagcaataccttgcaaccattatgatcttcaccaaaggggacaccaatctcccctaaatcaaatctaccatgaagatcataca |
36201155 |
T |
|
| Q |
404 |
ctacaactaggactgtttgcagctctttcatcttagcacacagaagaagagctctttctgtagttgtcaatcttttattattaacaaaacacatgcaaca |
503 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| | |||| ||||||| |||| |||||||| ||||||| ||||| |||||||||||||||| |
|
|
| T |
36201156 |
gtacaactaggactgtttgcagctccttcatcttagcacaaataagatgagctctatctgcagttgtcattcttttactattaccaaaacacatgcaaca |
36201255 |
T |
|
| Q |
504 |
agtagattcagctatatctgtcgtatcatcaaaattcagacctattgcatc |
554 |
Q |
| |
|
||| |||| ||| || ||| |||||| |||||| |||||||||||||| |
|
|
| T |
36201256 |
agttgattttgctgcctccgtcatatcattaaaattgagacctattgcatc |
36201306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 36198878 - 36198958
Alignment:
| Q |
117 |
ttcatctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggactt |
198 |
Q |
| |
|
|||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||| |
|
|
| T |
36198878 |
ttcatctataccta-aaaagcacttaccaatctctaatctctccaacattgtgttttccaaaggatgtgcatgtttagactt |
36198958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 36214722 - 36214833
Alignment:
| Q |
106 |
caaaatcttagttcatctatacctacaaaagcacttctcaacctctaatctctccaacatggtgttttccaaacgatgtgcatgtttggacttatgattt |
205 |
Q |
| |
|
|||| ||||| || ||||||||| ||||| |||||| |||| |||||||||| ||||||| |||||||||||| | |||||||||||||||| |||| |
|
|
| T |
36214722 |
caaagtcttaattgatctataccaacaaa-gcacttgtcaatctctaatctccccaacattgtgttttccaaataaagtgcatgtttggacttcaaattt |
36214820 |
T |
|
| Q |
206 |
tcatcatctctgc |
218 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
36214821 |
tcaccatctctgc |
36214833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 573 - 633
Target Start/End: Original strand, 36214872 - 36214932
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttcttat |
633 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
36214872 |
tctttgtcacagttgctgtgacaatcttttggaacaattgatctctctcagctcttcttat |
36214932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 573 - 633
Target Start/End: Original strand, 36188805 - 36188865
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttcttat |
633 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| ||||| |||| ||| ||||||| |
|
|
| T |
36188805 |
tctttgttacagttgttgtgacaatcttttggaacaattgatctttctcagctgttcttat |
36188865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 573 - 633
Target Start/End: Original strand, 36210286 - 36210346
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttcttat |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||| |
|
|
| T |
36210286 |
tctttgtcacagttgttgtgacaatcttttggaacgaatgatctttctctgctcttcttat |
36210346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 573 - 698
Target Start/End: Original strand, 36202727 - 36202852
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttcttatgacggttttcatacaagccttgactcttttatctagacc |
672 |
Q |
| |
|
|||| ||||| |||| |||||||||||||| ||||||| ||||| |||| | |||||| || |||||| | | | ||||||||||||||| |||| | || |
|
|
| T |
36202727 |
tcttcgtcacggttgctgtgacaatcttttcgaacaattgatctctctcagatcttctcataacggttgtgacagaagccttgactctttcatctggccc |
36202826 |
T |
|
| Q |
673 |
acatagtccgattaaattttctcctt |
698 |
Q |
| |
|
|||| ||| |||| |||||||||| |
|
|
| T |
36202827 |
gcataatccaattatgttttctcctt |
36202852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 573 - 698
Target Start/End: Original strand, 36208199 - 36208324
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttcttatgacggttttcatacaagccttgactcttttatctagacc |
672 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| ||||| |||| ||| ||||| | ||||| | | || ||||||| |||||||| | || |
|
|
| T |
36208199 |
tcttggtcacagttgctgtgacaatcttttggaacaattgatctctctcagcttttcttctagatgttttaacagaatgcttgactattttatctggccc |
36208298 |
T |
|
| Q |
673 |
acatagtccgattaaattttctcctt |
698 |
Q |
| |
|
|||| |||||||| ||||||||||| |
|
|
| T |
36208299 |
gcataatccgattatattttctcctt |
36208324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 573 - 631
Target Start/End: Original strand, 36185015 - 36185073
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttctt |
631 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| ||||| |||| ||| ||||| |
|
|
| T |
36185015 |
tcttggtcacagttgctgtgacaatcttttggaacaattgatctctctcagcttttctt |
36185073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 589 - 633
Target Start/End: Original strand, 36213650 - 36213694
Alignment:
| Q |
589 |
tgtgacaatcttttggaacaatagatctgtctcggctcttcttat |
633 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
36213650 |
tgtgacaatcttttggaacaattgatctctctcagctcttcttat |
36213694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 463
Target Start/End: Original strand, 36183441 - 36183484
Alignment:
| Q |
420 |
ttgcagctctttcatcttagcacacagaagaagagctctttctg |
463 |
Q |
| |
|
||||||||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
36183441 |
ttgcagctccttcatcttagcacacaaaataagagctctttctg |
36183484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 633
Target Start/End: Original strand, 36201342 - 36201400
Alignment:
| Q |
573 |
tctttgtcacagttgttgtgacaatcttttggaacaatagatctgtctcggctcttcttat |
633 |
Q |
| |
|
|||| |||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
36201342 |
tcttggtcacagttgctgtgacagtcttttggaacaattgatc--tctcagctcttcttat |
36201400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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