View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8995_low_6 (Length: 733)

Name: NF8995_low_6
Description: NF8995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8995_low_6
NF8995_low_6
[»] chr7 (51 HSPs)
chr7 (233-674)||(37478751-37479193)
chr7 (233-513)||(21887456-21887739)
chr7 (92-232)||(37480569-37480710)
chr7 (94-229)||(37476049-37476185)
chr7 (135-233)||(6778729-6778827)
chr7 (135-233)||(6774442-6774540)
chr7 (670-713)||(15093534-15093577)
chr7 (673-714)||(300420-300461)
chr7 (674-714)||(4698936-4698976)
chr7 (675-714)||(299369-299408)
chr7 (675-714)||(4650551-4650590)
chr7 (673-715)||(813663-813705)
chr7 (673-715)||(3333035-3333077)
chr7 (673-719)||(12180171-12180217)
chr7 (673-706)||(7881414-7881447)
chr7 (673-714)||(11684224-11684265)
chr7 (674-715)||(17358003-17358044)
chr7 (674-715)||(37080961-37081001)
chr7 (673-714)||(42042915-42042956)
chr7 (677-717)||(3223044-3223084)
chr7 (674-714)||(4651620-4651660)
chr7 (674-714)||(11685282-11685322)
chr7 (673-717)||(20033906-20033950)
chr7 (675-715)||(29105594-29105634)
chr7 (674-714)||(33582781-33582821)
chr7 (670-706)||(34348189-34348225)
chr7 (676-715)||(4700046-4700085)
chr7 (675-714)||(9555555-9555594)
chr7 (672-707)||(13593468-13593503)
chr7 (672-715)||(37101556-37101599)
chr7 (674-708)||(9556828-9556862)
chr7 (669-715)||(14187929-14187975)
chr7 (673-715)||(16986718-16986760)
chr7 (676-714)||(23050194-23050232)
chr7 (673-715)||(24919914-24919956)
chr7 (673-715)||(38651782-38651824)
chr7 (675-717)||(45824439-45824481)
chr7 (673-706)||(3216047-3216080)
chr7 (674-715)||(11666755-11666796)
chr7 (673-706)||(18449356-18449389)
chr7 (673-706)||(22947621-22947654)
chr7 (673-706)||(23774949-23774982)
chr7 (673-706)||(30441181-30441214)
chr7 (673-706)||(31079364-31079397)
chr7 (674-715)||(37079804-37079845)
chr7 (673-706)||(38415895-38415928)
chr7 (673-714)||(39459343-39459384)
chr7 (673-714)||(42042443-42042483)
chr7 (673-706)||(43741977-43742010)
chr7 (673-706)||(46483876-46483909)
chr7 (673-706)||(47668126-47668159)
[»] chr3 (38 HSPs)
chr3 (233-511)||(41052633-41052914)
chr3 (135-233)||(50915267-50915365)
chr3 (673-715)||(55120452-55120494)
chr3 (673-714)||(6290871-6290912)
chr3 (674-714)||(20840423-20840463)
chr3 (675-714)||(6291784-6291823)
chr3 (674-716)||(20550761-20550803)
chr3 (673-715)||(29224891-29224933)
chr3 (672-714)||(48629540-48629582)
chr3 (675-717)||(51831505-51831547)
chr3 (673-714)||(20839339-20839380)
chr3 (674-715)||(34519876-34519917)
chr3 (670-715)||(40004120-40004165)
chr3 (673-714)||(40816967-40817008)
chr3 (674-714)||(38640396-38640436)
chr3 (674-714)||(48628145-48628185)
chr3 (674-706)||(51659054-51659086)
chr3 (680-715)||(20551938-20551973)
chr3 (675-714)||(25024923-25024962)
chr3 (675-714)||(38442237-38442276)
chr3 (675-706)||(39937016-39937047)
chr3 (675-714)||(43674181-43674220)
chr3 (675-714)||(55119424-55119463)
chr3 (673-715)||(25484114-25484156)
chr3 (676-706)||(31627893-31627923)
chr3 (673-719)||(52291774-52291820)
chr3 (673-715)||(52866205-52866247)
chr3 (673-706)||(3526793-3526826)
chr3 (674-715)||(5047412-5047453)
chr3 (674-711)||(6122641-6122678)
chr3 (673-706)||(7014727-7014760)
chr3 (673-706)||(8128140-8128173)
chr3 (673-706)||(9268827-9268860)
chr3 (675-708)||(9768257-9768290)
chr3 (673-706)||(16871428-16871461)
chr3 (673-706)||(33312589-33312622)
chr3 (673-706)||(40717613-40717646)
chr3 (674-715)||(54014556-54014597)
[»] chr5 (42 HSPs)
chr5 (308-513)||(1685985-1686193)
chr5 (137-229)||(8992587-8992679)
chr5 (137-217)||(8983201-8983281)
chr5 (670-717)||(13952453-13952500)
chr5 (673-714)||(7242635-7242676)
chr5 (673-714)||(41826274-41826315)
chr5 (674-714)||(22563252-22563292)
chr5 (670-714)||(32637459-32637503)
chr5 (676-719)||(23294747-23294790)
chr5 (668-715)||(38031949-38031996)
chr5 (675-714)||(39987364-39987403)
chr5 (674-716)||(22634361-22634403)
chr5 (673-715)||(25088545-25088587)
chr5 (673-715)||(25146514-25146556)
chr5 (673-715)||(27830203-27830245)
chr5 (674-715)||(22562148-22562189)
chr5 (673-706)||(22634115-22634148)
chr5 (673-714)||(26394177-26394218)
chr5 (673-714)||(38678423-38678464)
chr5 (674-714)||(1459756-1459796)
chr5 (675-715)||(1950049-1950089)
chr5 (675-715)||(10542041-10542081)
chr5 (674-706)||(10691047-10691079)
chr5 (674-706)||(14946658-14946690)
chr5 (674-706)||(21000353-21000385)
chr5 (674-714)||(39987134-39987174)
chr5 (674-714)||(41825043-41825083)
chr5 (674-716)||(13078683-13078725)
chr5 (674-716)||(29989463-29989505)
chr5 (673-719)||(38941444-38941490)
chr5 (673-706)||(7884776-7884809)
chr5 (673-706)||(10542303-10542336)
chr5 (674-715)||(11762247-11762288)
chr5 (674-715)||(13006665-13006706)
chr5 (673-706)||(21262858-21262891)
chr5 (674-715)||(22833646-22833687)
chr5 (677-706)||(26404883-26404912)
chr5 (674-715)||(26720451-26720492)
chr5 (674-715)||(26990200-26990241)
chr5 (674-715)||(29690710-29690751)
chr5 (673-706)||(36872945-36872978)
chr5 (674-715)||(40616198-40616239)
[»] chr1 (33 HSPs)
chr1 (308-513)||(52038326-52038534)
chr1 (127-233)||(45071559-45071665)
chr1 (673-715)||(9403320-9403362)
chr1 (673-714)||(13146315-13146356)
chr1 (674-714)||(13769888-13769928)
chr1 (675-715)||(26712010-26712050)
chr1 (674-717)||(7702102-7702145)
chr1 (676-715)||(26742374-26742413)
chr1 (673-715)||(16028245-16028287)
chr1 (674-715)||(3787238-3787279)
chr1 (673-714)||(7611443-7611484)
chr1 (676-717)||(16280942-16280983)
chr1 (674-715)||(16420911-16420952)
chr1 (673-714)||(17201631-17201672)
chr1 (674-715)||(35552225-35552266)
chr1 (675-719)||(5613719-5613763)
chr1 (675-715)||(8264076-8264116)
chr1 (662-714)||(39935176-39935227)
chr1 (675-707)||(48759698-48759730)
chr1 (675-714)||(7610455-7610494)
chr1 (673-716)||(17889521-17889564)
chr1 (670-717)||(22053536-22053583)
chr1 (673-715)||(8262742-8262784)
chr1 (673-715)||(15231635-15231676)
chr1 (673-715)||(23516414-23516456)
chr1 (673-715)||(26190728-26190770)
chr1 (673-715)||(30147063-30147105)
chr1 (673-706)||(12887007-12887040)
chr1 (673-706)||(16985444-16985477)
chr1 (673-706)||(22374560-22374593)
chr1 (673-706)||(23284933-23284966)
chr1 (673-706)||(37216494-37216527)
chr1 (673-706)||(40633342-40633375)
[»] chr2 (37 HSPs)
chr2 (305-513)||(5182075-5182286)
chr2 (675-715)||(34828904-34828944)
chr2 (673-714)||(20025566-20025607)
chr2 (673-714)||(27197742-27197783)
chr2 (673-714)||(27853169-27853210)
chr2 (674-714)||(10246940-10246980)
chr2 (675-714)||(10245859-10245898)
chr2 (673-714)||(6317453-6317494)
chr2 (674-715)||(39257153-39257194)
chr2 (674-714)||(8224634-8224674)
chr2 (673-717)||(18386597-18386641)
chr2 (674-714)||(39163822-39163862)
chr2 (674-714)||(42631777-42631817)
chr2 (674-714)||(43440472-43440512)
chr2 (675-714)||(43441801-43441840)
chr2 (674-716)||(2077043-2077085)
chr2 (673-715)||(5157320-5157362)
chr2 (673-715)||(14274223-14274265)
chr2 (672-706)||(20962041-20962075)
chr2 (673-715)||(22422782-22422824)
chr2 (673-715)||(23081039-23081081)
chr2 (673-715)||(24388603-24388645)
chr2 (676-714)||(27199145-27199183)
chr2 (676-714)||(27854572-27854610)
chr2 (674-716)||(39164973-39165015)
chr2 (673-715)||(39752196-39752238)
chr2 (673-706)||(3328928-3328961)
chr2 (673-706)||(5863184-5863217)
chr2 (673-706)||(12883080-12883113)
chr2 (674-715)||(20911980-20912021)
chr2 (674-715)||(20962289-20962330)
chr2 (674-719)||(26502606-26502651)
chr2 (674-715)||(27926932-27926973)
chr2 (674-715)||(36202119-36202160)
chr2 (673-714)||(36528956-36528997)
chr2 (677-706)||(40926933-40926962)
chr2 (673-706)||(44353900-44353933)
[»] chr8 (51 HSPs)
chr8 (135-233)||(37362794-37362892)
chr8 (135-233)||(37365161-37365259)
chr8 (675-715)||(43898804-43898844)
chr8 (672-715)||(34663559-34663602)
chr8 (675-714)||(43897705-43897744)
chr8 (673-715)||(34821655-34821697)
chr8 (673-714)||(7505514-7505555)
chr8 (674-715)||(19391633-19391674)
chr8 (670-715)||(26252999-26253044)
chr8 (673-714)||(28889025-28889066)
chr8 (673-714)||(28890068-28890109)
chr8 (663-715)||(15113863-15113915)
chr8 (673-717)||(17713448-17713492)
chr8 (674-714)||(28907685-28907725)
chr8 (674-714)||(28908726-28908766)
chr8 (673-715)||(13200482-13200524)
chr8 (674-719)||(1552735-1552780)
chr8 (673-714)||(1553977-1554018)
chr8 (674-715)||(7504507-7504548)
chr8 (674-715)||(13199309-13199350)
chr8 (674-715)||(27418157-27418198)
chr8 (674-707)||(29841924-29841957)
chr8 (673-714)||(43722233-43722274)
chr8 (674-714)||(4099643-4099683)
chr8 (670-706)||(22980805-22980841)
chr8 (675-715)||(26254571-26254611)
chr8 (675-719)||(29579950-29579994)
chr8 (675-714)||(4100715-4100754)
chr8 (676-715)||(6162947-6162986)
chr8 (674-717)||(12318727-12318770)
chr8 (672-715)||(23589988-23590031)
chr8 (672-715)||(23810578-23810621)
chr8 (676-715)||(29579103-29579142)
chr8 (675-714)||(33330859-33330898)
chr8 (673-715)||(5685684-5685726)
chr8 (674-708)||(12317530-12317564)
chr8 (673-715)||(28004638-28004680)
chr8 (673-715)||(28061940-28061982)
chr8 (673-715)||(28970006-28970048)
chr8 (663-717)||(36574646-36574700)
chr8 (674-715)||(116616-116657)
chr8 (673-714)||(2671987-2672028)
chr8 (673-714)||(2672222-2672263)
chr8 (674-707)||(3260871-3260904)
chr8 (674-715)||(10761173-10761214)
chr8 (673-714)||(11967052-11967093)
chr8 (673-714)||(13198091-13198132)
chr8 (675-716)||(15058296-15058337)
chr8 (673-706)||(17159109-17159142)
chr8 (673-714)||(34820570-34820611)
chr8 (673-706)||(43681445-43681478)
[»] chr4 (42 HSPs)
chr4 (540-674)||(28660479-28660617)
chr4 (673-714)||(22623229-22623270)
chr4 (673-714)||(23943885-23943926)
chr4 (674-714)||(22624349-22624389)
chr4 (674-714)||(23944954-23944994)
chr4 (674-714)||(39701998-39702038)
chr4 (137-200)||(5647012-5647075)
chr4 (672-706)||(20569896-20569930)
chr4 (673-714)||(8652852-8652893)
chr4 (673-714)||(8664659-8664700)
chr4 (674-715)||(10264397-10264438)
chr4 (673-706)||(15323684-15323717)
chr4 (674-715)||(20570146-20570187)
chr4 (675-715)||(3238415-3238455)
chr4 (675-715)||(3849823-3849863)
chr4 (674-714)||(6457407-6457447)
chr4 (675-715)||(17697154-17697194)
chr4 (675-715)||(19495411-19495451)
chr4 (670-714)||(34442599-34442643)
chr4 (675-715)||(34443543-34443583)
chr4 (673-717)||(39534061-39534105)
chr4 (674-706)||(40269808-40269840)
chr4 (674-714)||(54554129-54554169)
chr4 (675-715)||(55483802-55483842)
chr4 (137-216)||(11174913-11174992)
chr4 (674-717)||(23483205-23483248)
chr4 (676-715)||(23573383-23573422)
chr4 (675-714)||(31067946-31067985)
chr4 (675-714)||(55482514-55482553)
chr4 (673-715)||(32640-32682)
chr4 (673-715)||(13168782-13168824)
chr4 (677-715)||(15658803-15658841)
chr4 (676-714)||(17138777-17138815)
chr4 (665-715)||(22324430-22324480)
chr4 (673-715)||(22853960-22854002)
chr4 (673-706)||(6788143-6788176)
chr4 (137-202)||(11182377-11182442)
chr4 (673-706)||(15323427-15323460)
chr4 (676-717)||(18638376-18638417)
chr4 (674-715)||(19675854-19675895)
chr4 (673-714)||(39702452-39702493)
chr4 (674-715)||(49236544-49236585)
[»] scaffold0017 (1 HSPs)
scaffold0017 (674-715)||(188412-188453)
[»] chr6 (33 HSPs)
chr6 (673-714)||(26241274-26241315)
chr6 (674-714)||(4212696-4212736)
chr6 (672-716)||(10129839-10129883)
chr6 (674-714)||(22795230-22795270)
chr6 (668-714)||(21180401-21180447)
chr6 (673-706)||(2255361-2255394)
chr6 (673-714)||(4211588-4211629)
chr6 (674-715)||(18698998-18699039)
chr6 (673-714)||(20222555-20222596)
chr6 (673-714)||(22116539-22116580)
chr6 (674-715)||(28228601-28228642)
chr6 (674-715)||(32276331-32276372)
chr6 (673-717)||(2039295-2039339)
chr6 (674-714)||(11536733-11536773)
chr6 (674-714)||(11562243-11562283)
chr6 (674-714)||(16543289-16543329)
chr6 (674-714)||(16840296-16840336)
chr6 (674-706)||(25948629-25948661)
chr6 (674-714)||(26242526-26242566)
chr6 (674-706)||(30240819-30240851)
chr6 (675-714)||(22794089-22794128)
chr6 (673-715)||(6176690-6176732)
chr6 (673-715)||(13788039-13788081)
chr6 (673-715)||(13796658-13796700)
chr6 (673-715)||(19591545-19591587)
chr6 (674-716)||(32009511-32009553)
chr6 (674-715)||(2965817-2965858)
chr6 (670-715)||(4408113-4408158)
chr6 (674-707)||(9218474-9218507)
chr6 (673-706)||(15502782-15502815)
chr6 (673-714)||(16542565-16542606)
chr6 (673-706)||(22043521-22043554)
chr6 (673-706)||(28039148-28039181)
[»] scaffold0038 (1 HSPs)
scaffold0038 (674-715)||(29099-29140)
[»] scaffold0014 (1 HSPs)
scaffold0014 (675-708)||(165351-165384)
[»] scaffold0580 (2 HSPs)
scaffold0580 (675-715)||(2183-2223)
scaffold0580 (675-715)||(9922-9962)
[»] scaffold0036 (1 HSPs)
scaffold0036 (670-714)||(90714-90758)
[»] scaffold0035 (1 HSPs)
scaffold0035 (674-706)||(72433-72465)
[»] scaffold0420 (1 HSPs)
scaffold0420 (673-716)||(4489-4532)
[»] scaffold0043 (2 HSPs)
scaffold0043 (675-706)||(47070-47101)
scaffold0043 (675-706)||(47328-47359)
[»] scaffold0009 (1 HSPs)
scaffold0009 (671-706)||(25019-25054)
[»] scaffold0031 (1 HSPs)
scaffold0031 (673-715)||(92664-92706)
[»] scaffold1130 (1 HSPs)
scaffold1130 (673-706)||(1251-1284)
[»] scaffold0744 (1 HSPs)
scaffold0744 (673-706)||(1525-1558)
[»] scaffold0473 (1 HSPs)
scaffold0473 (673-706)||(1872-1905)
[»] scaffold0098 (1 HSPs)
scaffold0098 (674-715)||(4205-4246)
[»] scaffold0018 (1 HSPs)
scaffold0018 (673-714)||(48614-48655)


Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 233 - 674
Target Start/End: Original strand, 37478751 - 37479193
Alignment:
Q  233 tattgttaaagcttagttcagtttaacactacctggaagaagaaaaataaaattaaacttattgaaggtaaagacattcttagattgagaaatggtgctt 332  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  37478751 tattgttaaagcttagttcagcttaacactacctgcaagaagaaaaataaaattaaacttattggagataaggacattcttagattgagaaatggtgctt 37478850  T
Q  333 tgacggg-aagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtcttacattgagcacattcgtgttcacaagtc 431  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  37478851 tgacggggaagacaattgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtataaaattgagcacattcgtgttcacaagtc 37478950  T
Q  432 taatcatagattgagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataagatatgtgtattttcaaatcatgaaggat 531  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37478951 taatcatagattgagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataagatatgtgtattttcaaatcatgaaggat 37479050  T
Q  532 taatatattgtccatattttgtcagactttgcatcacacagtgagcaaagggaaagttggcccgtacttaaattcctacttagcttacaagtagttttag 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37479051 taatatattgtccatattttgtcagactttgcatcacacagtgagcaaagggaaagttggcccgtacttaaattcctacttagcttacaagtagttttag 37479150  T
Q  632 agaccaatattcacaaatatttcataaacaataatattaacaa 674  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  37479151 agaccaatattcagaaatatttcataaacaacaatattaacaa 37479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 233 - 513
Target Start/End: Original strand, 21887456 - 21887739
Alignment:
Q  233 tattgttaaagcttagttcagtttaacactacctggaagaagaaaaataaaattaaacttattgaaggtaaagacattcttagattgagaaatggtgctt 332  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  21887456 tattgttaaagcttagttcagcttaacactacctgccagaagaaaaataaaattaaacttattagagataaggacattcttagattgagaaatggtgctt 21887555  T
Q  333 tgacggg-aagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtcttacattgagcacattcgtgttcacaagtc 431  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21887556 tgacggggaagacaatcgtataagacattgcttcagttgaccctgataatgatgaagcagagatttagtcttacattgagcacattcgtgttcacaagtc 21887655  T
Q  432 taatcatagatt--gagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataagatatgtgtat 513  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21887656 taatcatagatttagagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataagatatgtgtat 21887739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 37480569 - 37480710
Alignment:
Q  92 cgtaaaagcataataaatccttcaac-ttgcagccacaaatatgattcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagt 190  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  37480569 cgtaaaagcataataaatccttcaacgttgcagccacaaatatgattcattcaaatgcccattgattttccctacgaatttcttcctcttcctccgaagt 37480668  T
Q  191 gaaatcattcttgatattaaatgtctttcgaatttcctccgg 232  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  37480669 gaaatcattcttgatattaaaagtctttcgaatttcctccgg 37480710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 37476049 - 37476185
Alignment:
Q  94 taaaagcataataaatccttcaac-ttgcagccacaaatatgattcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtga 192  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37476049 taaaagcataataaatccttcaacgttgcagccagaaatatgattcattcaaatgcccattgattttccctgcgaacttcttcctcttcctccggagtga 37476148  T
Q  193 aatcattcttgatattaaatgtctttcgaatttcctc 229  Q
    ||||||||||||||||||| |||||||||||||||||    
T  37476149 aatcattcttgatattaaaagtctttcgaatttcctc 37476185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 6778827 - 6778729
Alignment:
Q  135 attcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttcctccggt 233  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6778827 attcattcaaatgcccattgattttccctacgaacttcttcctcttcctccggagtgaaatcattcttgatattaaaagtctttcgaatttcctccggt 6778729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 6774540 - 6774442
Alignment:
Q  135 attcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttcctccggt 233  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6774540 attcattcaactgcccattgattttccctacgaacttcttcctcttcctccggagtgaaatcattcttgatattaaaagtctttcgaatttcctccggt 6774442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 713
Target Start/End: Original strand, 15093534 - 15093577
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccatt 713  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  15093534 aacaagggttaatagtgtttttcacccttgtaatatatgccatt 15093577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 300461 - 300420
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  300461 aagggttaatagtgtttttcacccctgtaatataggccattt 300420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 4698936 - 4698976
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  4698936 agggttaatagtgtttttcacccctgtaatataggccattt 4698976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 299369 - 299408
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  299369 gggttaatagtgtttttcacccctgtaatataggccattt 299408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 4650551 - 4650590
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4650551 gggttaatagtgtttttcacccctgtaatataggccattt 4650590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 813705 - 813663
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  813705 aagggttaatagtgtttttcacccctgtaatataggtcatttt 813663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 3333077 - 3333035
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  3333077 aagggttaatagtgtttttcacccctgtaatataggtcatttt 3333035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 719
Target Start/End: Complemental strand, 12180217 - 12180171
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||    
T  12180217 aagggttaatagtgtttttcacccctgtaatatatgccaattttgat 12180171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 7881414 - 7881447
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||||    
T  7881414 aagggttaatagtgtttttcacccttgtaatata 7881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 11684224 - 11684265
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  11684224 aagggttaatagtgtttttcacccctgtaatataggtcattt 11684265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 17358003 - 17358044
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  17358003 agggttaatagtgtttttcacccttgtaatatatgtcatttt 17358044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 37081001 - 37080961
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  37081001 agggttaatagtgtttttcaccc-tgtaatataggccatttt 37080961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 42042956 - 42042915
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  42042956 aagggttaatagtgtttttcacccctgtaatataggtcattt 42042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 677 - 717
Target Start/End: Original strand, 3223044 - 3223084
Alignment:
Q  677 gttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  3223044 gttaatagtgtttttcacccctgtaatataggtcatttttg 3223084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 4651660 - 4651620
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  4651660 agggttaatagtgtttttcacccctgtaatataggctattt 4651620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 11685322 - 11685282
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  11685322 agggttaatagtgtttttcacccctgtaatataggtcattt 11685282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 673 - 717
Target Start/End: Complemental strand, 20033950 - 20033906
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||    
T  20033950 aagggttaatagtgtttttcacccctgtaatatatgtcatttttg 20033906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 29105634 - 29105594
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  29105634 gggttaatagtgtttttcacccctgtaatataggtcatttt 29105594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 33582781 - 33582821
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  33582781 agggttaatagtgattttcacccttgtaatatatgccattt 33582821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 706
Target Start/End: Complemental strand, 34348225 - 34348189
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||| |||||||||    
T  34348225 aacaagggttaatagtgtttttcacccctgtaatata 34348189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 715
Target Start/End: Complemental strand, 4700085 - 4700046
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  4700085 ggttaatagtgtttttcacccctgtaatataggctatttt 4700046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 9555555 - 9555594
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  9555555 gggttaatagtgtttttcatccctgtaatataggccattt 9555594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 707
Target Start/End: Complemental strand, 13593503 - 13593468
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatatag 707  Q
    ||||||||||||||||||||||||||| ||||||||    
T  13593503 caagggttaatagtgtttttcacccttataatatag 13593468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 715
Target Start/End: Complemental strand, 37101599 - 37101556
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||    
T  37101599 caagggttaatagtgtttttcacccctgtaatatatgtcatttt 37101556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 708
Target Start/End: Complemental strand, 9556862 - 9556828
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatatagg 708  Q
    ||||||||||||||||||||||| |||||||||||    
T  9556862 agggttaatagtgtttttcacccctgtaatatagg 9556828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 669 - 715
Target Start/End: Complemental strand, 14187975 - 14187929
Alignment:
Q  669 taacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||||||    
T  14187975 taacaagggttaatagtgttttacccccctgtaatataggtcatttt 14187929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 16986760 - 16986718
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| |||||| |||| ||||||    
T  16986760 aagggttaatagtgtttttcacccctgtaatctaggtcatttt 16986718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 714
Target Start/End: Complemental strand, 23050232 - 23050194
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  23050232 ggttaatagtgtttttcacccctgtaatataggtcattt 23050194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 24919956 - 24919914
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  24919956 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 24919914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 38651782 - 38651824
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  38651782 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 38651824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 675 - 717
Target Start/End: Complemental strand, 45824481 - 45824439
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  45824481 gggttaatagtgtttttcacccctgtaatataggatatttttg 45824439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 3216047 - 3216080
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  3216047 aagggttaatagtgtttttcacccctgtaatata 3216080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 11666755 - 11666796
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  11666755 agggttaatagtgtttttcacccctgtaatatatgtcatttt 11666796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 18449356 - 18449389
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||| |||||||||||||||||||    
T  18449356 aagggttaatagtgcttttcacccttgtaatata 18449389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 22947654 - 22947621
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  22947654 aagggttaatagtgtttttcacccctgtaatata 22947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 23774949 - 23774982
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  23774949 aagggttaatagtgtttttcacccctgtaatata 23774982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 30441181 - 30441214
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  30441181 aagggttaatagtgtttttcacccatgtaatata 30441214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 31079397 - 31079364
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  31079397 aagggttaatagtgtttttcacccctgtaatata 31079364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 37079804 - 37079845
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
T  37079804 agggttaatagtgcttttcacccctgtaatataggtcatttt 37079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 38415895 - 38415928
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  38415895 aagggttaatagtgtttttcacccctgtaatata 38415928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 39459343 - 39459384
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||| |||||||||| ||||||||| |||||||    
T  39459343 aagggttaatagtatttttcacccctgtaatatatgccattt 39459384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 42042443 - 42042483
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  42042443 aagggttaatagtgtttt-cacccctgtaatataggccattt 42042483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 43741977 - 43742010
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  43741977 aagggttaatagtgtttttcacccctgtaatata 43742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 46483909 - 46483876
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  46483909 aagggttaatagtgtttttcacccctgtaatata 46483876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 47668126 - 47668159
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  47668126 aagggttaatagtgtttttcacccctgtaatata 47668159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 233 - 511
Target Start/End: Complemental strand, 41052914 - 41052633
Alignment:
Q  233 tattgttaaagcttagttcagtttaacactacctggaagaagaaaaataaaattaaacttattgaaggtaaagacattcttagattgagaaatggtgctt 332  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  41052914 tattgttaaagcgtagttcagcttaacactacctgcaagaagaaaaataaaattaaacttattagagataaggacattcttagattgagaaatggtgctt 41052815  T
Q  333 tgacggg-aagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtcttacattgagcacattcgtgttcacaagtc 431  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41052814 tgaaggggaagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagcagagatttagtcttacattgagcacattcgtgttcacaagtc 41052715  T
Q  432 taatcatagatt--gagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataagatatgtgt 511  Q
    | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41052714 ttatcatagattgagagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataagatatgtgt 41052633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 50915365 - 50915267
Alignment:
Q  135 attcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttcctccggt 233  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||| ||| ||||| || ||||||||||||||||||    
T  50915365 attcattcaaatgcccattgattttcccttcgaacttcttcctcttcctgcggagtgaaatcgttctcgatgttaaaagtgtttcgaatttcctccggt 50915267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 55120494 - 55120452
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  55120494 aagggttaataatgtttttcacccttgtaatataggccatttt 55120452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 6290871 - 6290912
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6290871 aagggttaatagtgtttttcacccctgtaatataggccattt 6290912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 20840463 - 20840423
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20840463 agggttaatagcgtttttcacccttgtaatataggccattt 20840423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 675 - 714
Target Start/End: Complemental strand, 6291823 - 6291784
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  6291823 gggttaatagtgtttttcacccctgtaatataggccattt 6291784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 716
Target Start/End: Original strand, 20550761 - 20550803
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  20550761 agggttaatagtgtttttcaccctggtaatataggtcattttt 20550803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 29224933 - 29224891
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  29224933 aagggttaataatgtttttcacccttgtaatataggtcatttt 29224891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 714
Target Start/End: Complemental strand, 48629582 - 48629540
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  48629582 caagggttaatagtgtttttcacccctgtaatataggtcattt 48629540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 717
Target Start/End: Complemental strand, 51831547 - 51831505
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  51831547 gggttaatagtgtttttcacccctgtaatataggtcatttttg 51831505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 20839339 - 20839380
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  20839339 aagggttaatagtgtttttcatccctgtaatataggccattt 20839380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 34519876 - 34519917
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  34519876 agggttaatagtgtttttcacccctgtaatataggtcatttt 34519917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 40004165 - 40004120
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||    
T  40004165 aacaagggttaatagtgtttttcacccctgtaatatatgtcatttt 40004120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 40817008 - 40816967
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  40817008 aagggttaatagtgtttttcacccctgtaatataggtcattt 40816967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 38640396 - 38640436
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  38640396 agggttaatagtgtttttcacccctgtaatataggtcattt 38640436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 48628145 - 48628185
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  48628145 agggttaatagtgtttttcacccctgtaatataggacattt 48628185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Original strand, 51659054 - 51659086
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  51659054 agggttaatagtgtttttcacccttgtaatata 51659086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 715
Target Start/End: Complemental strand, 20551973 - 20551938
Alignment:
Q  680 aatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20551973 aatagtgcttttcacccttgtaatataggccatttt 20551938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 25024923 - 25024962
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  25024923 gggttaatagtgtttttcacccctgtaatatatgccattt 25024962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Complemental strand, 38442276 - 38442237
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  38442276 gggttaatagtgtttttcacccctgtaatataggtcattt 38442237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 706
Target Start/End: Original strand, 39937016 - 39937047
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||    
T  39937016 gggttaatagtgtttttcacccttgtaatata 39937047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 43674181 - 43674220
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  43674181 gggttaatagtgtttttcacccctgtaatatatgccattt 43674220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 55119424 - 55119463
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  55119424 gggttaatagtgtttttcacccctgtaatataggcaattt 55119463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 25484114 - 25484156
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  25484114 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 25484156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 706
Target Start/End: Complemental strand, 31627923 - 31627893
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||    
T  31627923 ggttaatagtgtttttcacccttgtaatata 31627893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 719
Target Start/End: Original strand, 52291774 - 52291820
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    ||||||||||||||||||||| |||||||||||| | ||||| ||||    
T  52291774 aagggttaatagtgtttttcatccttgtaatatatgtcatttatgat 52291820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 52866247 - 52866205
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| || |||||    
T  52866247 aagggttaatagtgtttttcacccctgtaatatatgcaatttt 52866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 3526826 - 3526793
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  3526826 aagggttaatagtgtttttcacccctgtaatata 3526793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 5047453 - 5047412
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  5047453 agggttaatagtgtttttcacccctgtaatatatgtcatttt 5047412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 6122678 - 6122641
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggcca 711  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  6122678 agggttaatagtgcttttcacccctgtaatataggcca 6122641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 7014727 - 7014760
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  7014727 aagggttaatagtgtttttcacccctgtaatata 7014760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 8128173 - 8128140
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  8128173 aagggttaatagtgtttttcacccctgtaatata 8128140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 9268860 - 9268827
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  9268860 aagggttaatagtgtttttcacccctgtaatata 9268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 708
Target Start/End: Complemental strand, 9768290 - 9768257
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatatagg 708  Q
    |||||||||||||||||||||| |||||||||||    
T  9768290 gggttaatagtgtttttcacccctgtaatatagg 9768257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 16871461 - 16871428
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||| |||||||||||||||||||||||||||||    
T  16871461 aaggattaatagtgtttttcacccttgtaatata 16871428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 33312622 - 33312589
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  33312622 aagggttaatagtgtttttcacccctgtaatata 33312589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 40717646 - 40717613
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  40717646 aagggttaatagtgtttttcacccctgtaatata 40717613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 54014556 - 54014597
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  54014556 agggttaatagtgtttttcacccctgtaatatatgtcatttt 54014597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 7e-91; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 308 - 513
Target Start/End: Original strand, 1685985 - 1686193
Alignment:
Q  308 attcttagattgagaaatggtgctttgacggg-aagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtcttaca 406  Q
    |||||||||||||||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1685985 attcttagattgagaaatggtgctttgacggggaagacaattgttaaagacattgcttcagtcgaccctgataatgatgaagcagagatttagtcttaca 1686084  T
Q  407 ttgagcacattcgtgttcacaagtctaatcatagatt--gagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataaga 504  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1686085 ttgagcacattcgtgttcacaagtctaatcatagattgagagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataaga 1686184  T
Q  505 tatgtgtat 513  Q
    ||| |||||    
T  1686185 tatatgtat 1686193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 8992679 - 8992587
Alignment:
Q  137 tcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttcctc 229  Q
    |||||||||||||||||| |||||||| |||| ||| ||||||||||| || | |||||||||||| || ||||| ||||| ||||| |||||    
T  8992679 tcattcaaatgcccattggttttccctacgaacttcctcctcttcctctggtgagaaatcattcttaatgttaaaggtcttgcgaatctcctc 8992587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 8983281 - 8983201
Alignment:
Q  137 tcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctt 217  Q
    |||||||||||||||||| |||||||| |||| ||| ||||||||||| || | ||| ||||||||||| || ||||||||    
T  8983281 tcattcaaatgcccattggttttccctacgaacttcctcctcttcctcaggtgagaagtcattcttgatgttgaatgtctt 8983201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 13952453 - 13952500
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  13952453 aacaagggttaatagtgtttttcacccttgtaatatatgtcatttttg 13952500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 7242635 - 7242676
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  7242635 aagggttaatagtgtttttcacccttgcaatataggccattt 7242676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 41826315 - 41826274
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  41826315 aagggttaatagtgtttttcacccctgtaatataggccattt 41826274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 22563292 - 22563252
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22563292 agggttaatagtgtttttcacccctgtaatataggccattt 22563252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 714
Target Start/End: Original strand, 32637459 - 32637503
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  32637459 aacaagggttaatagtgtttttcacccctgtaatataggtcattt 32637503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 676 - 719
Target Start/End: Complemental strand, 23294790 - 23294747
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    ||||||||||||||||||||||||||||||| | ||||||||||    
T  23294790 ggttaatagtgtttttcacccttgtaatatatgtcatttttgat 23294747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 668 - 715
Target Start/End: Original strand, 38031949 - 38031996
Alignment:
Q  668 ttaacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  38031949 ttaactagggttaatagtgtttttcacccctgtaatataggtcatttt 38031996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 675 - 714
Target Start/End: Complemental strand, 39987403 - 39987364
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  39987403 gggttaatagtgtttttcacccctgtaatataggccattt 39987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 716
Target Start/End: Complemental strand, 22634403 - 22634361
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  22634403 agggttaatagtgtttttcacccttgtaatatatgtcattttt 22634361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 25088545 - 25088587
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  25088545 aagggttaatagtgttttacccccttgtaatataggccatttt 25088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 25146514 - 25146556
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  25146514 aagggttaatagtgttttacccccttgtaatataggccatttt 25146556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 27830245 - 27830203
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  27830245 aagggttaatagtgtttttcacccctgtaatatatgccatttt 27830203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 22562148 - 22562189
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  22562148 agggttaatagtgttttttacccctgtaatataggccatttt 22562189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 22634115 - 22634148
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||||    
T  22634115 aagggttaatagtgtttttcacccttgtaatata 22634148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 26394218 - 26394177
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  26394218 aagggttaatagtgtttttcacccctgtaatataggtcattt 26394177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 38678464 - 38678423
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  38678464 aagggttaatagtgtttttcacccctgtaatatatgccattt 38678423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 1459756 - 1459796
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  1459756 agggttaatagtgcttttcacccctgtaatataggccattt 1459796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 1950089 - 1950049
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  1950089 gggttaatagtgtttttcacccctgtaatataggtcatttt 1950049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 10542041 - 10542081
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  10542041 gggttaatagtgtttttcacccttgtaatatatgtcatttt 10542081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Complemental strand, 10691079 - 10691047
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  10691079 agggttaatagtgtttttcacccttgtaatata 10691047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Complemental strand, 14946690 - 14946658
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  14946690 agggttaatagtgtttttcacccttgtaatata 14946658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Original strand, 21000353 - 21000385
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  21000353 agggttaatagtgtttttcacccttgtaatata 21000385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 39987134 - 39987174
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  39987134 agggttaatagtgtttttcacccctgtaatataggtcattt 39987174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 41825043 - 41825083
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  41825043 agggttaatagtgtttttcacccctgtaatataggtcattt 41825083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 716
Target Start/End: Complemental strand, 13078725 - 13078683
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    ||||||||||||||||||||||| ||||||||| | |||||||    
T  13078725 agggttaatagtgtttttcacccctgtaatatatgtcattttt 13078683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 716
Target Start/End: Original strand, 29989463 - 29989505
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    ||||||||||||||||||||||| ||||||||| | |||||||    
T  29989463 agggttaatagtgtttttcacccctgtaatatatgtcattttt 29989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 719
Target Start/End: Original strand, 38941444 - 38941490
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||||    
T  38941444 aagggttaatagtgtttttcacccctataatatatgtcatttttgat 38941490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 7884776 - 7884809
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||| ||||||||||    
T  7884776 aagggttaatagtgtttttcaccattgtaatata 7884809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 10542336 - 10542303
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  10542336 aagggttaatagtgtttttcacccctgtaatata 10542303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 11762247 - 11762288
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| || |||||    
T  11762247 agggttaatagtgtttttcacccctgtaatatatgctatttt 11762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 13006706 - 13006665
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  13006706 agggttaatagtgtttttcacccctgtaatatatgtcatttt 13006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 21262891 - 21262858
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  21262891 aagggttaatagtgtttttcacccctgtaatata 21262858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 22833687 - 22833646
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  22833687 agggttaatagtgtttttcacccctgtaatatatgtcatttt 22833646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 706
Target Start/End: Original strand, 26404883 - 26404912
Alignment:
Q  677 gttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||    
T  26404883 gttaatagtgtttttcacccttgtaatata 26404912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 26720492 - 26720451
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  26720492 agggttaataatgcttttcacccctgtaatataggccatttt 26720451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 26990241 - 26990200
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  26990241 agggttaataatgcttttcacccctgtaatataggccatttt 26990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 29690751 - 29690710
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  29690751 agggttaatagtgtttttcacccctgtaatatatgtcatttt 29690710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 36872945 - 36872978
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||| ||||||||||||||||||||    
T  36872945 aagggttaatagtatttttcacccttgtaatata 36872978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 40616198 - 40616239
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||| |||||||||||||||||||||| | ||||||    
T  40616198 agggttaataatgtttttcacccttgtaatatatgtcatttt 40616239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 7e-91; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 308 - 513
Target Start/End: Original strand, 52038326 - 52038534
Alignment:
Q  308 attcttagattgagaaatggtgctttgacggg-aagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtcttaca 406  Q
    |||||||||||||||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52038326 attcttagattgagaaatggtgctttgacggggaagacaattgttaaagacattgcttcagtcgaccctgataatgatgaagcagagatttagtcttaca 52038425  T
Q  407 ttgagcacattcgtgttcacaagtctaatcatagatt--gagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataaga 504  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52038426 ttgagcacattcgtgttcacaagtctaatcatagattgagagacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaataaga 52038525  T
Q  505 tatgtgtat 513  Q
    ||| |||||    
T  52038526 tatatgtat 52038534  T

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Target: chr1; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 45071559 - 45071665
Alignment:
Q  127 caaatatgattcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttc 226  Q
    ||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  45071559 caaatttgattcattcaaatgcccattgattttcccagcgaacttcttcttcttccttcggagtgaaatcattcttgatgttaaaagtctttcgaatttc 45071658  T
Q  227 ctccggt 233  Q
    |||||||    
T  45071659 ctccggt 45071665  T

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Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 9403320 - 9403362
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  9403320 aagggttaatagtgtttttcacccttgtaatatatgccatttt 9403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 13146356 - 13146315
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  13146356 aagggttaatagtgtttttcacccttgtaatataggtcattt 13146315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 13769928 - 13769888
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13769928 agggttaatagtgtttttcacccctgtaatataggccattt 13769888  T

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Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 26712010 - 26712050
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  26712010 gggttaatagtgtttttcacccttgtaatatatgccatttt 26712050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 674 - 717
Target Start/End: Original strand, 7702102 - 7702145
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  7702102 agggttaatagtgtttttcacccctgtaatataggtcatttttg 7702145  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 676 - 715
Target Start/End: Original strand, 26742374 - 26742413
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  26742374 ggttaatagtgattttcacccttgtaatataggccatttt 26742413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 16028245 - 16028287
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  16028245 aagggttaatagtgtttttcacccctataatataggccatttt 16028287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 3787238 - 3787279
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  3787238 agggttaatagtgtttttcacccctgtaatataggtcatttt 3787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 7611484 - 7611443
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  7611484 aagggttaatagtgtttttcacccctgtaatataggtcattt 7611443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 717
Target Start/End: Complemental strand, 16280983 - 16280942
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  16280983 ggttaatagtgtttttcacccatgtaatataggtcatttttg 16280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 16420911 - 16420952
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  16420911 agggttaatagtgttttacacccttgtaatataggtcatttt 16420952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 17201631 - 17201672
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  17201631 aagggttaatagtgtttttcacccctgtaatataggtcattt 17201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 35552266 - 35552225
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  35552266 agggttaatagtgtttttcatccttgtaatatatgccatttt 35552225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 719
Target Start/End: Original strand, 5613719 - 5613763
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  5613719 gggttaatagtgtttttcacccctgtaatataggtcatttctgat 5613763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 8264116 - 8264076
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  8264116 gggttaatagtgtttttcacccctgtaatataggtcatttt 8264076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 662 - 714
Target Start/End: Complemental strand, 39935227 - 39935176
Alignment:
Q  662 ataatattaacaagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||| || |||||||||||||||||||||||| ||||||||| |||||||    
T  39935227 ataatataaaaaagggttaatagtgtttttcaccc-tgtaatatatgccattt 39935176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 707
Target Start/End: Complemental strand, 48759730 - 48759698
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatatag 707  Q
    |||||||||||||||||||||||||||||||||    
T  48759730 gggttaatagtgtttttcacccttgtaatatag 48759698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 7610455 - 7610494
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  7610455 gggttaatagtgtttttcacccctgtaatataggtcattt 7610494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 716
Target Start/End: Original strand, 17889521 - 17889564
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  17889521 aagggttaatagtgtttttcacccatgtaatatatgtcattttt 17889564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Complemental strand, 22053583 - 22053536
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||| |||||||||| ||||||||||  ||||||||    
T  22053583 aacaagggttaatagtatttttcacccctgtaatatagctcatttttg 22053536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 8262742 - 8262784
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||    
T  8262742 aagggttaatagagtttttcacccctgtaatataggtcatttt 8262784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 15231635 - 15231676
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  15231635 aagggttaatagtgtttttcaccc-tgtaatataggtcatttt 15231676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 23516456 - 23516414
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| | |||||||||| |||||    
T  23516456 aagggttaatagtgtttttcacccctataatataggctatttt 23516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 26190728 - 26190770
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| | ||||||||||||||| ||||||    
T  26190728 aagggttaatagtgttttacccccttgtaatataggtcatttt 26190770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 30147063 - 30147105
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| | ||||||||||||||| ||||||    
T  30147063 aagggttaatagtgttttacccccttgtaatataggtcatttt 30147105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 12887040 - 12887007
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  12887040 aagggttaatagtgtttttcacccctgtaatata 12887007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 16985477 - 16985444
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||| |||||||    
T  16985477 aagggttaatagtgtttttcacccttataatata 16985444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 22374560 - 22374593
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  22374560 aagggttaatagtgtttttcacccctgtaatata 22374593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 23284966 - 23284933
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  23284966 aagggttaatagtgtttttcacccctgtaatata 23284933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 37216527 - 37216494
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  37216527 aagggttaatagtgtttttcacccctgtaatata 37216494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 40633375 - 40633342
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  40633375 aagggttaatagtgtttttcacccctgtaatata 40633342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 4e-83; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 305 - 513
Target Start/End: Complemental strand, 5182286 - 5182075
Alignment:
Q  305 gacattcttagattgagaaatggtgctttgacggg-aagacaatcgtataagacattgcttcagtcgaccctgataatgatgaagtagagatttagtctt 403  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||    
T  5182286 gacattcttagattgagaaatggtgctttgttggggaagacaattgtataagacattgcttcagtcgaccctgataatgatgcagcggagattcagtctt 5182187  T
Q  404 acattgagcacattcgtgttcacaagtctaatcatagattgag--acatgattattgaacttcaatagggatgacatagaattatgactcatgttcaata 501  Q
    ||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5182186 acattgagcacattcgtatttacaagtctaatcatagattgagaaacatgattattgaacttcaatagggatgacatagaattatgactcatgttcaata 5182087  T
Q  502 agatatgtgtat 513  Q
    ||||||||||||    
T  5182086 agatatgtgtat 5182075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 34828904 - 34828944
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34828904 gggttaatagtgtttttcacccttgtaatataggccatttt 34828944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 20025607 - 20025566
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  20025607 aagggttaatagtgtttttcacccttgtaatatatgccattt 20025566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 27197742 - 27197783
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27197742 aagggttaatagtgtttttcacccctgtaatataggccattt 27197783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 27853169 - 27853210
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27853169 aagggttaatagtgtttttcacccctgtaatataggccattt 27853210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 10246980 - 10246940
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  10246980 agggttaatagtgtttttcacccctgtaatataggccattt 10246940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 10245859 - 10245898
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  10245859 gggttaatagtgtttttcacccctgtaatataggccattt 10245898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 6317494 - 6317453
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  6317494 aagggttaatagtgtttttcacccctgtaatataggtcattt 6317453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 39257153 - 39257194
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  39257153 agggttaatagtgtttttcacccttgtaatatatgtcatttt 39257194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 8224674 - 8224634
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  8224674 agggttaatagtgtttttcacccctgtaatatatgccattt 8224634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 673 - 717
Target Start/End: Complemental strand, 18386641 - 18386597
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||||||| ||||||||| || |||||||    
T  18386641 aagggttaatagtgtttttcacccctgtaatataagctatttttg 18386597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 39163822 - 39163862
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  39163822 agggttaatagtgtttttcacccctgtaatataggtcattt 39163862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 42631777 - 42631817
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  42631777 agggttaatagtgtttttcacccctgtaatataggtcattt 42631817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 43440472 - 43440512
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  43440472 agggttaatagtgtttttcacccctgtaatataggtcattt 43440512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Complemental strand, 43441840 - 43441801
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  43441840 gggttaatagtgtttttcacccctgtaatataggtcattt 43441801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 716
Target Start/End: Original strand, 2077043 - 2077085
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    ||||||||||||||||||||||| ||||||||| | |||||||    
T  2077043 agggttaatagtgtttttcacccctgtaatatatgtcattttt 2077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 5157362 - 5157320
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||    
T  5157362 aagggttaatagtgcttttcacccctgtaatataggtcatttt 5157320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 14274223 - 14274265
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||| |||||||||||||||||||| | ||||||    
T  14274223 aagggttaatagtttttttcacccttgtaatatatgtcatttt 14274265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 706
Target Start/End: Original strand, 20962041 - 20962075
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||| |||||||||    
T  20962041 caagggttaatagtgtttttcacccctgtaatata 20962075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 22422782 - 22422824
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||| |||||||| | ||||||    
T  22422782 aagggttaatagtgtttttcaccctcgtaatatatgtcatttt 22422824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 23081081 - 23081039
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  23081081 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 23081039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 24388603 - 24388645
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||| |||||||||||||| | ||||||    
T  24388603 aagggttaatagtgtttttaacccttgtaatatatgtcatttt 24388645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 714
Target Start/End: Complemental strand, 27199183 - 27199145
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  27199183 ggttaatagtgtttttcacccctgtaatataggtcattt 27199145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 714
Target Start/End: Complemental strand, 27854610 - 27854572
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  27854610 ggttaatagtgtttttcacccctgtaatataggtcattt 27854572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 716
Target Start/End: Complemental strand, 39165015 - 39164973
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||    
T  39165015 agggttaatagtgcttttcacccttataatatatgccattttt 39164973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 39752238 - 39752196
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| | ||||||||||||||| ||||||    
T  39752238 aagggttaatagtgttttacccccttgtaatataggtcatttt 39752196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 3328928 - 3328961
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  3328928 aagggttaatagtgtttttcacccctgtaatata 3328961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 5863184 - 5863217
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  5863184 aagggttaatagtgtttttcacccctgtaatata 5863217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 12883080 - 12883113
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  12883080 aagggttaatagtgtttttcacccctgtaatata 12883113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 20911980 - 20912021
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
T  20911980 agggttaatagtgcttttcacccctgtaatataggtcatttt 20912021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 20962330 - 20962289
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  20962330 agggttaatagtgtttttcacccctgtaatatatgtcatttt 20962289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 719
Target Start/End: Complemental strand, 26502651 - 26502606
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    ||||||||||||| ||||||||||||||||||| | ||||| ||||    
T  26502651 agggttaatagtgcttttcacccttgtaatatatgtcatttctgat 26502606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 27926932 - 27926973
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  27926932 agggttaatagtgtttttcacccctgtaatatatgtcatttt 27926973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 36202119 - 36202160
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  36202119 agggttaatagtgtttttcacccctgtaatatatgtcatttt 36202160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 36528956 - 36528997
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  36528956 aagggttaatagtgcttttcacccctgtaatataggtcattt 36528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 706
Target Start/End: Complemental strand, 40926962 - 40926933
Alignment:
Q  677 gttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||    
T  40926962 gttaatagtgtttttcacccttgtaatata 40926933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 44353900 - 44353933
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  44353900 aagggttaatagtgtttttcacccctgtaatata 44353933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 37362794 - 37362892
Alignment:
Q  135 attcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttcctccggt 233  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||    
T  37362794 attcattcaaatacccattgattttccctacgaacttcttcctcttcctccggagtgaaatcattcttgatgtgaaaagtctctcgaatttgctccggt 37362892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 37365259 - 37365161
Alignment:
Q  135 attcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtctttcgaatttcctccggt 233  Q
    |||||||||||||||||||| |||||||| |||| |||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||    
T  37365259 attcattcaaatgcccattggttttccctacgaacttcttccttttcctccggagtgaaatcattcttgatgtgaaaagtctctcgaatttgctccggt 37365161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 43898844 - 43898804
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43898844 gggttaatagtgtttttcacccttgtaatataggccatttt 43898804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 672 - 715
Target Start/End: Complemental strand, 34663602 - 34663559
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  34663602 caagggttaatagtgtttttcacccctgtaatataggccatttt 34663559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 43897705 - 43897744
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43897705 gggttaatagtgtttttcacccttgtaatataggccattt 43897744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 34821697 - 34821655
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  34821697 aagggttaatagtgtttttcacccctgtaatataggccatttt 34821655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 7505555 - 7505514
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  7505555 aagggttaatagtgtttttcacccctgtaatataggccattt 7505514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 19391633 - 19391674
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  19391633 agggttaatagtgtttttcacccctgtaatataggccatttt 19391674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 26252999 - 26253044
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  26252999 aacaagggttaatagtgtttttcacccctgtaatataggtcatttt 26253044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 28889025 - 28889066
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  28889025 aagggttaatagtgtttttcacccctgtaatataggccattt 28889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 28890109 - 28890068
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  28890109 aagggttaatagtgtttttcacccctgtaatataggccattt 28890068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 715
Target Start/End: Original strand, 15113863 - 15113915
Alignment:
Q  663 taatattaacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| | ||||||    
T  15113863 taataataataagggttaatagtgtttttcacccttgtaatatatgtcatttt 15113915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 673 - 717
Target Start/End: Original strand, 17713448 - 17713492
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  17713448 aagggttaatagtgtttttcacccctgtaatataggtcatttttg 17713492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 28907685 - 28907725
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  28907685 agggttaatagtgtttttcacccctgtaatataggccattt 28907725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 28908766 - 28908726
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  28908766 agggttaatagtgtttttcacccctgtaatataggccattt 28908726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 13200482 - 13200524
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  13200482 aagggttaatagtgtttttcacccctgtaatataggtcatttt 13200524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 719
Target Start/End: Original strand, 1552735 - 1552780
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  1552735 agggttaatagtgtttttcacccctgtaatataggtcatttctgat 1552780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 1554018 - 1553977
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  1554018 aagggttaatagtgtttttcacccctgtaatataggctattt 1553977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 7504507 - 7504548
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  7504507 agggttaatagtgtttttcacccctgtaatataggctatttt 7504548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 13199350 - 13199309
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  13199350 agggttaatagtgtttttcacccctgtaatataggtcatttt 13199309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 27418198 - 27418157
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  27418198 agggttaatagtgtttttcacccctgtaatataggtcatttt 27418157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 707
Target Start/End: Original strand, 29841924 - 29841957
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatatag 707  Q
    ||||||||||||||||||||||||||||||||||    
T  29841924 agggttaatagtgtttttcacccttgtaatatag 29841957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 43722233 - 43722274
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  43722233 aagggttaatagtgtttttcacccctgtaatataggctattt 43722274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 4099643 - 4099683
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  4099643 agggttaatagtgtttttcacccctgtaatataggctattt 4099683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 706
Target Start/End: Original strand, 22980805 - 22980841
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||| |||||||||    
T  22980805 aacaagggttaatagtgtttttcacccctgtaatata 22980841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 26254611 - 26254571
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  26254611 gggttaatagtgtttttcacccctgtaatataggtcatttt 26254571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 719
Target Start/End: Complemental strand, 29579994 - 29579950
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttttgat 719  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  29579994 gggttaatagtgtttttcacccctgtaatataggtcatttctgat 29579950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Complemental strand, 4100754 - 4100715
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  4100754 gggttaatagtgtttttcacccctgtaatataggtcattt 4100715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 715
Target Start/End: Original strand, 6162947 - 6162986
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  6162947 ggttaatagtgtttttcacccttgtaatatatgtcatttt 6162986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 717
Target Start/End: Complemental strand, 12318770 - 12318727
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||    
T  12318770 agggttaatagtgcttttcacccctgtaatataggtcatttttg 12318727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 715
Target Start/End: Complemental strand, 23590031 - 23589988
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||    
T  23590031 caagggttaataatgtttttcacccctgtaatataggtcatttt 23589988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 715
Target Start/End: Complemental strand, 23810621 - 23810578
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||    
T  23810621 caagggttaatagtatttttcacccctgtaatataggtcatttt 23810578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 715
Target Start/End: Original strand, 29579103 - 29579142
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  29579103 ggttaatagtgtttttcacccctgtaatataggtcatttt 29579142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 33330859 - 33330898
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  33330859 gggttaatagtgtttttcacccctgtaatataggtcattt 33330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 5685726 - 5685684
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||| ||||||||| |||||||||| |||||||    
T  5685726 aagggttaatagtgcttttcacccctgtaatatagaccatttt 5685684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 708
Target Start/End: Original strand, 12317530 - 12317564
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatatagg 708  Q
    ||||||||||||||||||||||| |||||||||||    
T  12317530 agggttaatagtgtttttcacccctgtaatatagg 12317564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 28004638 - 28004680
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  28004638 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 28004680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 28061940 - 28061982
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  28061940 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 28061982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 28970006 - 28970048
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||| ||||||||| |||||||||| |||||||    
T  28970006 aagggttaatagtgcttttcacccatgtaatatagcccatttt 28970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 717
Target Start/End: Complemental strand, 36574700 - 36574646
Alignment:
Q  663 taatattaacaagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||||||  ||||||||||||||||||||| || ||||||||| | ||||||||    
T  36574700 taatattataaagggttaatagtgtttttcaaccctgtaatatatgtcatttttg 36574646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 116616 - 116657
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  116616 agggttaatagtgtttttcacccctgtaatatatgtcatttt 116657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 2671987 - 2672028
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||| ||||||||| ||||||||| |||||||    
T  2671987 aagggttaatagtgcttttcacccctgtaatatatgccattt 2672028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 2672263 - 2672222
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||| ||||||||| ||||||||| |||||||    
T  2672263 aagggttaatagtgcttttcacccctgtaatatatgccattt 2672222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 707
Target Start/End: Original strand, 3260871 - 3260904
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatatag 707  Q
    ||||||||||||||||||||||| ||||||||||    
T  3260871 agggttaatagtgtttttcacccctgtaatatag 3260904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 10761214 - 10761173
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  10761214 agggttaatagtgtttttcacccctgtaatatatgtcatttt 10761173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 11967093 - 11967052
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  11967093 aagggttaatagtgtttttcacccctggaatataggtcattt 11967052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 13198091 - 13198132
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  13198091 aagggttaatagtgcttttcacccctgtaatataggtcattt 13198132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 716
Target Start/End: Original strand, 15058296 - 15058337
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    ||||||||| || ||||||||| |||||||||||||||||||    
T  15058296 gggttaataatgcttttcacccctgtaatataggccattttt 15058337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 17159109 - 17159142
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  17159109 aagggttaatagtgtttttcacccctgtaatata 17159142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 34820570 - 34820611
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  34820570 aagggttaatagtgcttttcacccctgtaatataggtcattt 34820611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 43681478 - 43681445
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  43681478 aagggttaatagtgtttttcacccctgtaatata 43681445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 540 - 674
Target Start/End: Original strand, 28660479 - 28660617
Alignment:
Q  540 tgtccatatttt--gtcagactttgcatcacacagtgagcaaa-gggaaagttggcccgtacttaaattcctacttagcttacaagtagttttagagacc 636  Q
    ||||||||||||  ||| || ||||||||| | |||||||||| |||| |||||||||  |||||||||||||||||||||||||||||||||||| |||    
T  28660479 tgtccatattttctgtctgaatttgcatcagatagtgagcaaaagggacagttggccctcacttaaattcctacttagcttacaagtagttttagaaacc 28660578  T
Q  637 -aatattcacaaatatttcataaacaataatattaacaa 674  Q
     ||||||||||| | ||||||||| || |||||||||||    
T  28660579 taatattcacaattttttcataaataacaatattaacaa 28660617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 22623229 - 22623270
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22623229 aagggttaatagtgtttttcacccttgtaatataggccattt 22623270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 23943885 - 23943926
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  23943885 aagggttaatagtgtttttcacccctgtaatataggccattt 23943926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 22624389 - 22624349
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  22624389 agggttaatagtgtttttcacccttgtaatataggtcattt 22624349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 23944994 - 23944954
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  23944994 agggttaatagtgtttttcacccctgtaatataggccattt 23944954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 39701998 - 39702038
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  39701998 agggttaatagtgtttttcacccctgtaatataggccattt 39702038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 5647075 - 5647012
Alignment:
Q  137 tcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattc 200  Q
    |||||| || ||||||||||||||| | ||||| || |||||||||||||||| ||||||||||    
T  5647075 tcattctaaagcccattgattttccttacgaatctcctcctcttcctccggagagaaatcattc 5647012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 706
Target Start/End: Original strand, 20569896 - 20569930
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||||    
T  20569896 caagggttaatagtgtttttcacccttgtaatata 20569930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 8652893 - 8652852
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  8652893 aagggttaatagtgtttttcacccctgtaatataggtcattt 8652852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 8664700 - 8664659
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  8664700 aagggttaatagtgtttttcacccctgtaatataggtcattt 8664659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 10264397 - 10264438
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  10264397 agggttaatagtgtttttcacccttgtaatatatgtcatttt 10264438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 15323717 - 15323684
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||||    
T  15323717 aagggttaatagtgtttttcacccttgtaatata 15323684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 20570187 - 20570146
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  20570187 agggttaatggtgtttttcacccttgtaatatatgccatttt 20570146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 3238415 - 3238455
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  3238415 gggttaatagtgtttttcacccttgtaatatatgtcatttt 3238455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 3849823 - 3849863
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  3849823 gggttaatagtgtttttcacccctgtaatataggtcatttt 3849863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 6457407 - 6457447
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  6457407 agggttaatagtgtttttcacccctgtaatatatgccattt 6457447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 17697154 - 17697194
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  17697154 gggttaatagtgtttttcacccttgtaatatatgtcatttt 17697194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 19495411 - 19495451
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  19495411 gggttaatagtgtttttcacccttgtaatatatgtcatttt 19495451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 714
Target Start/End: Original strand, 34442599 - 34442643
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||    
T  34442599 aacaagggttaatagtgcttttcacccctgtaatataggtcattt 34442643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 34443583 - 34443543
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  34443583 gggttaatagagtttttcacccttgtaatataggtcatttt 34443543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 673 - 717
Target Start/End: Original strand, 39534061 - 39534105
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||||||| ||||||||| || |||||||    
T  39534061 aagggttaatagtgtttttcacccctgtaatatatgcaatttttg 39534105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Complemental strand, 40269840 - 40269808
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  40269840 agggttaatagtgtttttcacccttgtaatata 40269808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 54554169 - 54554129
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  54554169 agggttaatagtgtttttcacccctgtaatataggcaattt 54554129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 55483842 - 55483802
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  55483842 gggttaatagtgtttttcacccctgtaatataggtcatttt 55483802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 11174992 - 11174913
Alignment:
Q  137 tcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattcttgatattaaatgtct 216  Q
    ||||||||| |||||||||||||| || |||||||  | ||||||||| ||| || |||||||||| || || |||||||    
T  11174992 tcattcaaaagcccattgattttcgctacgaattttctgctcttcctcaggactgtaatcattcttaatgttgaatgtct 11174913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 717
Target Start/End: Original strand, 23483205 - 23483248
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    |||||||||||||||||||| |||||||| |||||||| |||||    
T  23483205 agggttaatagtgtttttcatccttgtaaaataggccaattttg 23483248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 715
Target Start/End: Complemental strand, 23573422 - 23573383
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  23573422 ggttaatagtgtttttcacccttgtaatatatgtcatttt 23573383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 31067946 - 31067985
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  31067946 gggttaatagtgtttttcacccctgtaatataggtcattt 31067985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 55482514 - 55482553
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  55482514 gggttaatagtgtttttcacccctgtaatataggtcattt 55482553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 32682 - 32640
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  32682 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 32640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 13168782 - 13168824
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| || |||||    
T  13168782 aagggttaatagtgtttttcacccctgtaatatatgctatttt 13168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 15658803 - 15658841
Alignment:
Q  677 gttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  15658803 gttaatagtatttttcacccttgtaatatatgccatttt 15658841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 714
Target Start/End: Complemental strand, 17138815 - 17138777
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  17138815 ggttaatagtgtttttcacccctgtaatataggctattt 17138777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 715
Target Start/End: Original strand, 22324430 - 22324480
Alignment:
Q  665 atattaacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||| ||||||||||||||||| ||||||||| ||||||||| | ||||||    
T  22324430 atataaacaagggttaatagtgcttttcacccctgtaatatatgtcatttt 22324480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 22853960 - 22854002
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||| | ||||||||||||||| ||||||    
T  22853960 aagggttaatagtgttttacccccttgtaatataggtcatttt 22854002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 6788176 - 6788143
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||| |||||||    
T  6788176 aagggttaatagtgtttttcacccttataatata 6788143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 11182442 - 11182377
Alignment:
Q  137 tcattcaaatgcccattgattttccctgcgaatttcttcctcttcctccggagtgaaatcattctt 202  Q
    ||||||||| |||||||||||||| || |||||||  | ||||||||| ||| || ||||||||||    
T  11182442 tcattcaaaagcccattgattttcgctacgaattttctgctcttcctcgggactgtaatcattctt 11182377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 15323427 - 15323460
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  15323427 aagggttaatagtgtttttcacccctgtaatata 15323460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 717
Target Start/End: Complemental strand, 18638417 - 18638376
Alignment:
Q  676 ggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||||||||||||||||||| ||||||||| | ||||||||    
T  18638417 ggttaatagtgtttttcacccctgtaatatatgtcatttttg 18638376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 19675895 - 19675854
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  19675895 agggttaatagtgtttttcacccctgtaatatatgtcatttt 19675854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 39702493 - 39702452
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||| ||||| ||||||||||| |||||    
T  39702493 aagggttaatagtgttttacacccctgtaatataggtcattt 39702452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 49236585 - 49236544
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  49236585 agggttaatagtgtttttcacccctgtaatatatgtcatttt 49236544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 188412 - 188453
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  188412 agggttaatagtgtttttcacccttgtaatataggccatttt 188453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 26241274 - 26241315
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  26241274 aagggttaatagtgtttttcacccctgtaatataggccattt 26241315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 4212736 - 4212696
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  4212736 agggttaatagtgtttttcacccttgtaatataggtcattt 4212696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 716
Target Start/End: Original strand, 10129839 - 10129883
Alignment:
Q  672 caagggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    |||||||||||||||||||||| || |||||||||||||||||||    
T  10129839 caagggttaatagtgtttttcaaccctgtaatataggccattttt 10129883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 22795270 - 22795230
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22795270 agggttaatagtgtttttcacccctgtaatataggccattt 22795230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 668 - 714
Target Start/End: Complemental strand, 21180447 - 21180401
Alignment:
Q  668 ttaacaagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||    
T  21180447 ttaagaagggttaatagtgtttttcacccctgtaatataggtcattt 21180401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 2255361 - 2255394
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||||    
T  2255361 aagggttaatagtgtttttcacccttgtaatata 2255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 4211588 - 4211629
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  4211588 aagggttaatagtgtttttcacccctgtaatatagggcattt 4211629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 18698998 - 18699039
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  18698998 agggttaatagtgtttttcacccttgtaatatatgtcatttt 18699039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 20222596 - 20222555
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  20222596 aagggttaatagtgtttttcacccttataatatatgccattt 20222555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 22116580 - 22116539
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  22116580 aagggttaatagtgtttttcacccttataatatatgccattt 22116539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 28228601 - 28228642
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  28228601 agggttaatagtgtttttcacccctgtaatatatgccatttt 28228642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 32276372 - 32276331
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  32276372 agggttaatagtgtttttcacccttgtaatatatgtcatttt 32276331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 673 - 717
Target Start/End: Original strand, 2039295 - 2039339
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttttg 717  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||    
T  2039295 aagggctaatagtgtttttcacccttgtaatatatgtcatttttg 2039339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 11536733 - 11536773
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  11536733 agggttaatagtgtttttcacccctgtaatataggtcattt 11536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 11562243 - 11562283
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  11562243 agggttaatagtgtttttcacccctgtaatataggtcattt 11562283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 16543329 - 16543289
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  16543329 agggttaatagtgtttttcacccctgtaatataggtcattt 16543289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 16840296 - 16840336
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  16840296 agggttaatagtgtttttcacccctgtaatataggtcattt 16840336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Original strand, 25948629 - 25948661
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  25948629 agggttaatagtgtttttcacccttgtaatata 25948661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 26242566 - 26242526
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  26242566 agggttaatagtgtttttcacccctgtaatataggtcattt 26242526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Complemental strand, 30240851 - 30240819
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  30240851 agggttaatagtgtttttcacccttgtaatata 30240819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 714
Target Start/End: Original strand, 22794089 - 22794128
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  22794089 gggttaatagtgtttttcacccctgtaatataggtcattt 22794128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 6176690 - 6176732
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  6176690 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 6176732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 13788039 - 13788081
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  13788039 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 13788081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 13796658 - 13796700
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  13796658 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 13796700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Complemental strand, 19591587 - 19591545
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  19591587 aagggttaatagtgtttttcacccctgtaatatatgtcatttt 19591545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 716
Target Start/End: Original strand, 32009511 - 32009553
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    |||||||||||||||||| |||| ||||||||||| |||||||    
T  32009511 agggttaatagtgtttttgacccctgtaatataggtcattttt 32009553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 2965858 - 2965817
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  2965858 agggttaatagtgtttttcacccctgtaatatatgtcatttt 2965817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 4408158 - 4408113
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||||||| || |||||| | ||||||    
T  4408158 aacaagggttaatagtgtttttcacccctgcaatatatgtcatttt 4408113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 707
Target Start/End: Complemental strand, 9218507 - 9218474
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatatag 707  Q
    ||||||||||||||||||||||| ||||||||||    
T  9218507 agggttaatagtgtttttcacccctgtaatatag 9218474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 15502815 - 15502782
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  15502815 aagggttaatagtgtttttcacccctgtaatata 15502782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 16542565 - 16542606
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  16542565 aagggttaatagtgtttttcatccctgtaatataggtcattt 16542606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 22043521 - 22043554
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  22043521 aagggttaatagtgtttttcacccctgtaatata 22043554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 28039181 - 28039148
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  28039181 aagggttaatagtgtttttcacccctgtaatata 28039148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 29099 - 29140
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  29099 agggttaatagtgtttttcacccctgtaatatatgccatttt 29140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 708
Target Start/End: Original strand, 165351 - 165384
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatatagg 708  Q
    ||||||||||||||||||||||||||||||||||    
T  165351 gggttaatagtgtttttcacccttgtaatatagg 165384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 2183 - 2223
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  2183 gggttaatagtgtttttcacccctgtaatataggtcatttt 2223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 9922 - 9962
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  9922 gggttaatagtgtttttcacccctgtaatataggtcatttt 9962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 714
Target Start/End: Original strand, 90714 - 90758
Alignment:
Q  670 aacaagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||    
T  90714 aacaagggttaatagtgtttttcacccctataatatatgccattt 90758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 706
Target Start/End: Complemental strand, 72465 - 72433
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||||||||||    
T  72465 agggttaatagtgtttttcacccttgtaatata 72433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 716
Target Start/End: Complemental strand, 4532 - 4489
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattttt 716  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  4532 aagggttaatagtgtttttcacccctgtaatatatgtcattttt 4489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 706
Target Start/End: Original strand, 47070 - 47101
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||    
T  47070 gggttaatagtgtttttcacccttgtaatata 47101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 706
Target Start/End: Complemental strand, 47359 - 47328
Alignment:
Q  675 gggttaatagtgtttttcacccttgtaatata 706  Q
    ||||||||||||||||||||||||||||||||    
T  47359 gggttaatagtgtttttcacccttgtaatata 47328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 671 - 706
Target Start/End: Complemental strand, 25054 - 25019
Alignment:
Q  671 acaagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||||| |||||||||    
T  25054 acaagggttaatagtgtttttcacccctgtaatata 25019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 715
Target Start/End: Original strand, 92664 - 92706
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    |||||||||||||| ||||||||||||||||||| | ||||||    
T  92664 aagggttaatagtgcttttcacccttgtaatatatgtcatttt 92706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 1251 - 1284
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||| |||||||||||||||||||    
T  1251 aagggttaatagtgcttttcacccttgtaatata 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 1558 - 1525
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  1558 aagggttaatagtgtttttcacccctgtaatata 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 1905 - 1872
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatata 706  Q
    |||||||||||||||||||||||| |||||||||    
T  1905 aagggttaatagtgtttttcacccctgtaatata 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 4246 - 4205
Alignment:
Q  674 agggttaatagtgtttttcacccttgtaatataggccatttt 715  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  4246 agggttaatagtgtttttcacccctgtaatatatgtcatttt 4205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 714
Target Start/End: Complemental strand, 48655 - 48614
Alignment:
Q  673 aagggttaatagtgtttttcacccttgtaatataggccattt 714  Q
    |||||||||||||||||||||||| |||| ||||| ||||||    
T  48655 aagggttaatagtgtttttcacccctgtagtatagaccattt 48614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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