View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8997_low_4 (Length: 575)

Name: NF8997_low_4
Description: NF8997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8997_low_4
NF8997_low_4
[»] chr6 (31 HSPs)
chr6 (18-468)||(30946900-30947350)
chr6 (469-575)||(25554643-25554749)
chr6 (469-575)||(2109455-2109561)
chr6 (469-571)||(6760905-6761007)
chr6 (469-567)||(8707919-8708017)
chr6 (524-575)||(29076352-29076403)
chr6 (524-575)||(29109885-29109936)
chr6 (524-575)||(29111325-29111376)
chr6 (469-575)||(32691088-32691195)
chr6 (469-546)||(13164315-13164392)
chr6 (469-545)||(13158373-13158449)
chr6 (469-545)||(13163229-13163305)
chr6 (469-575)||(13382566-13382673)
chr6 (524-575)||(14012404-14012455)
chr6 (525-575)||(15888829-15888879)
chr6 (533-574)||(11840280-11840321)
chr6 (519-573)||(9048063-9048117)
chr6 (528-575)||(29097857-29097904)
chr6 (528-575)||(31151067-31151114)
chr6 (519-573)||(9049115-9049169)
chr6 (526-575)||(22305102-22305152)
chr6 (469-551)||(28249822-28249904)
chr6 (519-573)||(32222517-32222571)
chr6 (528-573)||(29061293-29061338)
chr6 (528-573)||(29065737-29065782)
chr6 (528-573)||(29074750-29074795)
chr6 (528-573)||(29079514-29079559)
chr6 (528-573)||(29107323-29107368)
chr6 (527-572)||(32223545-32223590)
chr6 (509-545)||(35096649-35096685)
chr6 (518-574)||(35177590-35177646)
[»] chr3 (60 HSPs)
chr3 (469-575)||(27739596-27739702)
chr3 (469-575)||(12897762-12897868)
chr3 (469-575)||(28817030-28817136)
chr3 (469-575)||(11249553-11249659)
chr3 (469-575)||(34543165-34543271)
chr3 (469-575)||(19988397-19988503)
chr3 (469-575)||(50998709-50998815)
chr3 (471-575)||(4002680-4002784)
chr3 (469-575)||(11094050-11094155)
chr3 (469-574)||(10491965-10492070)
chr3 (469-546)||(26245273-26245350)
chr3 (515-575)||(19750026-19750086)
chr3 (513-575)||(14043927-14043989)
chr3 (509-575)||(24703444-24703510)
chr3 (474-551)||(2645398-2645475)
chr3 (469-546)||(11095142-11095219)
chr3 (469-542)||(19750075-19750148)
chr3 (469-546)||(27738546-27738623)
chr3 (518-574)||(2062373-2062429)
chr3 (528-575)||(55385134-55385181)
chr3 (526-575)||(2271342-2271391)
chr3 (469-546)||(16851064-16851141)
chr3 (502-575)||(19842475-19842548)
chr3 (469-573)||(2266968-2267072)
chr3 (469-545)||(16852089-16852160)
chr3 (528-575)||(16647176-16647223)
chr3 (528-575)||(43478859-43478906)
chr3 (509-575)||(13743271-13743337)
chr3 (528-574)||(48246409-48246455)
chr3 (526-575)||(4004832-4004881)
chr3 (519-575)||(4331849-4331905)
chr3 (519-575)||(7941098-7941154)
chr3 (519-575)||(16611088-16611144)
chr3 (519-575)||(22048109-22048165)
chr3 (502-575)||(2743368-2743442)
chr3 (525-575)||(8475820-8475870)
chr3 (469-546)||(12898745-12898822)
chr3 (526-575)||(36134318-36134367)
chr3 (519-575)||(4015158-4015214)
chr3 (528-575)||(43476188-43476236)
chr3 (528-575)||(596781-596828)
chr3 (509-552)||(7942057-7942100)
chr3 (532-574)||(600574-600616)
chr3 (526-575)||(2647728-2647778)
chr3 (509-575)||(13747747-13747813)
chr3 (513-575)||(45076279-45076341)
chr3 (509-546)||(1294135-1294172)
chr3 (469-574)||(4008353-4008458)
chr3 (469-546)||(11248495-11248572)
chr3 (498-551)||(16444574-16444627)
chr3 (532-573)||(17561760-17561801)
chr3 (528-573)||(19341625-19341670)
chr3 (498-551)||(34045374-34045427)
chr3 (471-575)||(42900116-42900221)
chr3 (498-551)||(42904236-42904289)
chr3 (498-551)||(46388924-46388977)
chr3 (509-573)||(24700699-24700763)
chr3 (477-545)||(26246286-26246354)
chr3 (519-551)||(32200245-32200277)
chr3 (527-575)||(42166439-42166487)
[»] chr8 (50 HSPs)
chr8 (469-575)||(5533054-5533160)
chr8 (469-575)||(28617506-28617612)
chr8 (469-575)||(38604277-38604383)
chr8 (469-575)||(44841903-44842009)
chr8 (469-575)||(27501538-27501644)
chr8 (469-573)||(43363291-43363395)
chr8 (469-575)||(44933797-44933903)
chr8 (469-575)||(2335177-2335283)
chr8 (469-575)||(32583990-32584096)
chr8 (469-575)||(22550894-22551000)
chr8 (469-541)||(915698-915770)
chr8 (469-545)||(31185504-31185580)
chr8 (469-575)||(15030821-15030928)
chr8 (469-575)||(45066390-45066497)
chr8 (519-573)||(22547457-22547511)
chr8 (469-546)||(28618494-28618571)
chr8 (513-573)||(31745164-31745224)
chr8 (469-546)||(27502623-27502700)
chr8 (469-542)||(43362261-43362334)
chr8 (475-546)||(5532405-5532476)
chr8 (528-575)||(34235152-34235199)
chr8 (532-575)||(39601705-39601748)
chr8 (469-543)||(914658-914732)
chr8 (502-550)||(12207259-12207307)
chr8 (502-550)||(12451687-12451735)
chr8 (519-575)||(45409859-45409915)
chr8 (513-575)||(13783137-13783199)
chr8 (509-575)||(28694056-28694122)
chr8 (502-575)||(7121815-7121888)
chr8 (528-573)||(20854614-20854659)
chr8 (477-546)||(32585048-32585117)
chr8 (532-573)||(34366912-34366953)
chr8 (502-575)||(38134141-38134214)
chr8 (519-575)||(10749703-10749759)
chr8 (528-575)||(36127369-36127416)
chr8 (532-575)||(39939244-39939287)
chr8 (513-575)||(16939362-16939424)
chr8 (519-573)||(39831144-39831198)
chr8 (513-575)||(40740888-40740950)
chr8 (517-575)||(41016400-41016458)
chr8 (470-552)||(41472066-41472148)
chr8 (498-551)||(22510514-22510567)
chr8 (498-551)||(26659420-26659473)
chr8 (509-550)||(39277515-39277556)
chr8 (519-551)||(25588-25620)
chr8 (519-575)||(34371875-34371931)
chr8 (509-573)||(41471071-41471135)
chr8 (525-573)||(44726499-44726547)
chr8 (525-573)||(44727536-44727583)
chr8 (527-575)||(44885711-44885759)
[»] chr4 (61 HSPs)
chr4 (469-575)||(23220616-23220722)
chr4 (469-575)||(40833639-40833745)
chr4 (469-575)||(21022917-21023023)
chr4 (481-575)||(38369211-38369305)
chr4 (469-574)||(50446946-50447051)
chr4 (469-575)||(46254477-46254583)
chr4 (469-575)||(7485690-7485796)
chr4 (469-575)||(51037497-51037603)
chr4 (469-575)||(31242153-31242260)
chr4 (509-575)||(14200539-14200605)
chr4 (469-575)||(21015677-21015783)
chr4 (469-575)||(26792273-26792380)
chr4 (469-546)||(14201585-14201662)
chr4 (469-546)||(23221725-23221802)
chr4 (469-546)||(55587296-55587373)
chr4 (504-575)||(3403820-3403891)
chr4 (528-575)||(16984190-16984237)
chr4 (524-575)||(28081451-28081502)
chr4 (528-575)||(39590597-39590644)
chr4 (502-575)||(28084019-28084090)
chr4 (469-546)||(55588342-55588419)
chr4 (499-575)||(34530798-34530874)
chr4 (528-575)||(16983519-16983566)
chr4 (509-575)||(18884533-18884599)
chr4 (469-543)||(40832584-40832658)
chr4 (519-575)||(28235590-28235646)
chr4 (469-573)||(50196941-50197045)
chr4 (528-575)||(51492068-51492115)
chr4 (469-551)||(3408294-3408376)
chr4 (519-573)||(16473711-16473765)
chr4 (513-575)||(51036485-51036547)
chr4 (469-546)||(7484668-7484745)
chr4 (469-546)||(38368169-38368246)
chr4 (530-575)||(44674163-44674208)
chr4 (498-546)||(46253453-46253501)
chr4 (519-571)||(50023580-50023632)
chr4 (519-571)||(50030698-50030750)
chr4 (509-552)||(27872357-27872400)
chr4 (528-575)||(49889680-49889727)
chr4 (528-575)||(50274757-50274804)
chr4 (525-575)||(3183975-3184025)
chr4 (469-551)||(6181845-6181927)
chr4 (502-575)||(15995692-15995766)
chr4 (502-575)||(19069157-19069231)
chr4 (509-575)||(20208488-20208554)
chr4 (509-571)||(37296218-37296280)
chr4 (519-573)||(40061192-40061246)
chr4 (509-575)||(48807415-48807481)
chr4 (519-573)||(50020105-50020159)
chr4 (526-575)||(55793914-55793964)
chr4 (498-551)||(1309168-1309221)
chr4 (498-551)||(9893318-9893371)
chr4 (498-551)||(31421672-31421725)
chr4 (502-575)||(37855830-37855903)
chr4 (526-571)||(40354609-40354654)
chr4 (518-575)||(48806472-48806529)
chr4 (498-551)||(49090413-49090466)
chr4 (509-545)||(6790242-6790278)
chr4 (519-575)||(43176657-43176713)
chr4 (525-573)||(44680105-44680153)
chr4 (501-553)||(51494900-51494952)
[»] chr1 (47 HSPs)
chr1 (469-575)||(586634-586740)
chr1 (469-575)||(4883171-4883277)
chr1 (509-575)||(30194399-30194465)
chr1 (469-575)||(19914404-19914510)
chr1 (477-575)||(19161838-19161936)
chr1 (469-545)||(43011765-43011841)
chr1 (509-575)||(48228331-48228397)
chr1 (509-570)||(49429169-49429230)
chr1 (469-541)||(30195447-30195519)
chr1 (524-573)||(94402-94451)
chr1 (522-575)||(2425714-2425767)
chr1 (528-575)||(29765558-29765605)
chr1 (528-575)||(44596858-44596905)
chr1 (524-575)||(49426706-49426757)
chr1 (528-571)||(51271624-51271667)
chr1 (469-551)||(2365172-2365254)
chr1 (469-575)||(49661762-49661868)
chr1 (509-574)||(42290274-42290339)
chr1 (528-571)||(46886420-46886463)
chr1 (498-575)||(22397786-22397864)
chr1 (509-575)||(44470040-44470106)
chr1 (509-546)||(19915373-19915410)
chr1 (528-573)||(47505916-47505961)
chr1 (502-551)||(50036818-50036867)
chr1 (528-573)||(50343999-50344044)
chr1 (502-574)||(41909735-41909807)
chr1 (469-545)||(47652665-47652741)
chr1 (477-540)||(43012709-43012772)
chr1 (513-575)||(4208378-4208440)
chr1 (502-575)||(6557886-6557959)
chr1 (526-575)||(13636151-13636201)
chr1 (509-575)||(13761073-13761139)
chr1 (519-573)||(14985326-14985380)
chr1 (526-575)||(19159617-19159667)
chr1 (498-575)||(20349423-20349501)
chr1 (519-573)||(29424368-29424422)
chr1 (502-575)||(30910032-30910106)
chr1 (509-547)||(38632469-38632507)
chr1 (469-551)||(38633207-38633289)
chr1 (509-575)||(41453816-41453882)
chr1 (469-546)||(585592-585669)
chr1 (502-575)||(5329094-5329167)
chr1 (498-551)||(13629370-13629423)
chr1 (524-573)||(18609926-18609975)
chr1 (498-551)||(19924721-19924774)
chr1 (498-551)||(26875659-26875712)
chr1 (469-545)||(37991550-37991626)
[»] chr2 (56 HSPs)
chr2 (469-575)||(36510885-36510991)
chr2 (469-575)||(30803047-30803153)
chr2 (476-574)||(39489128-39489226)
chr2 (469-575)||(10424777-10424883)
chr2 (469-575)||(29074032-29074138)
chr2 (469-575)||(3085974-3086080)
chr2 (509-572)||(29947745-29947808)
chr2 (469-575)||(28477096-28477202)
chr2 (465-575)||(22003430-22003541)
chr2 (469-575)||(43619171-43619278)
chr2 (469-551)||(20937835-20937917)
chr2 (524-573)||(23347359-23347408)
chr2 (528-575)||(3943221-3943268)
chr2 (528-575)||(7189980-7190027)
chr2 (524-575)||(23346773-23346824)
chr2 (528-575)||(10425848-10425895)
chr2 (502-573)||(12252513-12252584)
chr2 (513-556)||(33416111-33416154)
chr2 (469-575)||(20951075-20951181)
chr2 (519-575)||(41273277-41273333)
chr2 (528-575)||(43870150-43870197)
chr2 (502-575)||(3803572-3803646)
chr2 (469-575)||(39947537-39947643)
chr2 (469-551)||(43312669-43312751)
chr2 (509-574)||(2271767-2271832)
chr2 (509-546)||(4286072-4286109)
chr2 (502-575)||(37322140-37322212)
chr2 (469-542)||(39490025-39490098)
chr2 (498-551)||(42505816-42505869)
chr2 (513-573)||(29401636-29401696)
chr2 (469-545)||(36509906-36509982)
chr2 (525-573)||(43258764-43258812)
chr2 (525-563)||(3940931-3940969)
chr2 (509-575)||(14002497-14002563)
chr2 (526-575)||(17424126-17424176)
chr2 (498-575)||(21998180-21998258)
chr2 (470-575)||(28139585-28139691)
chr2 (519-553)||(28419395-28419429)
chr2 (521-575)||(29406962-29407016)
chr2 (518-556)||(29601193-29601231)
chr2 (469-551)||(30497003-30497085)
chr2 (509-575)||(33222594-33222660)
chr2 (498-575)||(38945728-38945806)
chr2 (469-547)||(39951207-39951285)
chr2 (498-551)||(3940783-3940836)
chr2 (509-546)||(4286759-4286796)
chr2 (469-550)||(28468578-28468659)
chr2 (528-573)||(36652903-36652948)
chr2 (509-574)||(40156377-40156442)
chr2 (498-551)||(43978502-43978555)
chr2 (531-575)||(24607597-24607641)
chr2 (509-573)||(29407918-29407982)
chr2 (502-546)||(35935188-35935232)
chr2 (519-551)||(39793950-39793982)
chr2 (519-551)||(39800706-39800738)
chr2 (509-573)||(40220617-40220681)
[»] chr5 (33 HSPs)
chr5 (469-575)||(3891421-3891527)
chr5 (502-575)||(8539545-8539618)
chr5 (470-571)||(5715-5816)
chr5 (498-575)||(14692-14769)
chr5 (509-575)||(11348504-11348570)
chr5 (469-551)||(27659877-27659959)
chr5 (469-546)||(3892495-3892572)
chr5 (509-574)||(30192470-30192535)
chr5 (532-575)||(7757326-7757369)
chr5 (532-575)||(43094605-43094648)
chr5 (528-574)||(7762274-7762320)
chr5 (469-551)||(8574620-8574701)
chr5 (490-575)||(30711188-30711274)
chr5 (532-575)||(11346008-11346051)
chr5 (532-575)||(43094009-43094052)
chr5 (509-575)||(13563645-13563711)
chr5 (513-575)||(41623077-41623139)
chr5 (519-575)||(20744022-20744078)
chr5 (519-551)||(28241853-28241885)
chr5 (469-552)||(11027032-11027115)
chr5 (469-575)||(13837661-13837768)
chr5 (524-575)||(34122517-34122568)
chr5 (526-575)||(8576973-8577023)
chr5 (498-575)||(8580508-8580586)
chr5 (509-575)||(18512209-18512275)
chr5 (509-575)||(18512681-18512746)
chr5 (526-575)||(30708897-30708947)
chr5 (509-551)||(35672058-35672100)
chr5 (519-573)||(38408498-38408552)
chr5 (528-573)||(5200387-5200432)
chr5 (509-546)||(13838482-13838519)
chr5 (498-551)||(38853445-38853498)
chr5 (502-542)||(34080134-34080174)
[»] scaffold0016 (1 HSPs)
scaffold0016 (469-574)||(69251-69356)
[»] chr7 (38 HSPs)
chr7 (469-575)||(42583089-42583195)
chr7 (469-575)||(12210619-12210725)
chr7 (469-575)||(45258033-45258139)
chr7 (469-575)||(46908502-46908608)
chr7 (469-575)||(7007-7113)
chr7 (469-575)||(8076-8182)
chr7 (469-575)||(27656976-27657082)
chr7 (469-575)||(13921293-13921399)
chr7 (477-575)||(17840919-17841017)
chr7 (469-546)||(46907477-46907554)
chr7 (469-545)||(42795139-42795215)
chr7 (469-556)||(10524405-10524492)
chr7 (469-542)||(49141680-49141753)
chr7 (528-575)||(46738799-46738846)
chr7 (468-546)||(49140593-49140671)
chr7 (469-546)||(42582053-42582130)
chr7 (469-546)||(42794134-42794211)
chr7 (526-573)||(17838645-17838692)
chr7 (469-551)||(18109828-18109910)
chr7 (509-575)||(30846824-30846890)
chr7 (469-559)||(38083745-38083835)
chr7 (477-551)||(40928981-40929055)
chr7 (519-575)||(17834475-17834531)
chr7 (513-575)||(38555442-38555504)
chr7 (509-546)||(47751242-47751279)
chr7 (524-575)||(34139890-34139941)
chr7 (498-575)||(618754-618832)
chr7 (509-575)||(14101426-14101492)
chr7 (509-575)||(14102377-14102443)
chr7 (509-575)||(14411443-14411509)
chr7 (509-575)||(14412394-14412460)
chr7 (509-546)||(7974917-7974954)
chr7 (498-551)||(9371441-9371494)
chr7 (470-571)||(13644360-13644461)
chr7 (470-551)||(40141280-40141361)
chr7 (498-551)||(48403338-48403391)
chr7 (509-545)||(34139728-34139764)
chr7 (528-556)||(47521414-47521442)
[»] scaffold0494 (1 HSPs)
scaffold0494 (469-551)||(11507-11589)
[»] scaffold0199 (2 HSPs)
scaffold0199 (469-575)||(10590-10696)
scaffold0199 (526-575)||(12417-12466)
[»] scaffold0184 (1 HSPs)
scaffold0184 (524-574)||(18323-18373)
[»] scaffold0078 (1 HSPs)
scaffold0078 (524-574)||(54471-54521)
[»] scaffold0101 (1 HSPs)
scaffold0101 (498-550)||(41111-41163)
[»] scaffold0268 (1 HSPs)
scaffold0268 (528-575)||(15442-15489)
[»] scaffold0176 (2 HSPs)
scaffold0176 (524-575)||(815-866)
scaffold0176 (509-545)||(653-689)
[»] scaffold0260 (1 HSPs)
scaffold0260 (498-575)||(11746-11824)
[»] scaffold0180 (1 HSPs)
scaffold0180 (525-575)||(15651-15701)
[»] scaffold0038 (1 HSPs)
scaffold0038 (469-551)||(49984-50066)
[»] scaffold0094 (1 HSPs)
scaffold0094 (469-522)||(240-293)
[»] scaffold0513 (1 HSPs)
scaffold0513 (503-575)||(8171-8243)
[»] scaffold0283 (1 HSPs)
scaffold0283 (527-575)||(1642-1690)


Alignment Details
Target: chr6 (Bit Score: 435; Significance: 0; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 18 - 468
Target Start/End: Complemental strand, 30947350 - 30946900
Alignment:
Q  18 aaattgccatgaatttagcatgaattgagaaaatatccttgatatttggaaccctaagacgaagattctgagacaaatgccattgattcgtgttgaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30947350 aaattgccatgaatttagcatgaattgagaaaatatccttgatatttggaaccctaagatgaagattctgagacaaatgccattgattcgtgttgaatga 30947251  T
Q  118 tgaaattcgattggtgatgaagatgatcgagtgttgattgggaatgtcgaagggagagaacggaaatggcgagggagaacagagagaacgaacgaaagtg 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30947250 tgaaatttgattggtgatgaagatgatcgagtgttgattgggaatgtcgaagggagagaacggaaatggcgagggagaacagagagaacgaacgaaagtg 30947151  T
Q  218 aaagcgtggaaaattaaaagaataagaactaccggcactttgatatgtttcttacataacttcaaacttggaatttcatgtaacagcttttcttcatcgc 317  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30947150 aaagcgtggaaaatcaaaagaataagaactaccggcactttgatatgtttcttacataacttcaaacttggaatttcatgtaacagcttttcttcatcgc 30947051  T
Q  318 caacatgacctgaaagaaagaacgattgtcggaaccacatagagatttttcacgtaaatttagagagatattggaacaatgattgagacgtgaaacaatg 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30947050 caacatgacctgaaagaaagaacgattgtcggaaccacatagagatttttcacgtaaatttagagagatattggaacaatgattgagacgtgaaacaatg 30946951  T
Q  418 ctgtcacggtagacatgggttacaaataacttggtcccattggttgatacc 468  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30946950 atgtcacggtagacatgggttacaaataacttggtcccattggttgatacc 30946900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 25554643 - 25554749
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||  |||| || |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25554643 aattgttgttcccacttttactttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagt 25554742  T
Q  569 taactgc 575  Q
    |||||||    
T  25554743 taactgc 25554749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 2109455 - 2109561
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||  |||| || |||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  2109455 aattgttgttcccactttttgtttggctgtgccacacgagtaaattactcaaatacctctcggcagttaactgccgaagttttagaaatacggctgcagt 2109554  T
Q  569 taactgc 575  Q
    |||||||    
T  2109555 taactgc 2109561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 571
Target Start/End: Complemental strand, 6761007 - 6760905
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| || |||||||| | |||||||||||||| ||| | || ||||||||||||||||||||||||||||||||||||    
T  6761007 aattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgccccttggtagttaactgccgaagttttagaaatacggctgcagt 6760908  T
Q  569 taa 571  Q
    |||    
T  6760907 taa 6760905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 469 - 567
Target Start/End: Original strand, 8707919 - 8708017
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcag 567  Q
    ||||||||||||||| |||| |||| |  |||||||| | |||||||||||||| ||| ||| ||| |||||||||||||||||||||||||| |||||    
T  8707919 aattgttgttcccacatttggtttggccgtgccacacgagtaaattactcaaatgcccatcgacagctaactgccgaagttttagaaatacggttgcag 8708017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 29076403 - 29076352
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  29076403 cccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgc 29076352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 29109936 - 29109885
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  29109936 cccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgc 29109885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 29111376 - 29111325
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  29111376 cccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgc 29111325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 32691088 - 32691195
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||||||||||||| |||| ||||  | |||||||||| |||||||| ||||| ||| ||| |||||||||||||||| |||||| ||  |||| ||||    
T  32691088 aattgttgttcccacatttggtttggttgtgccacacaagtaaattacgcaaatgcccctcgacagttaactgccgaagtttttaggaaatcggcggcag 32691187  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  32691188 ttaactgc 32691195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 13164392 - 13164315
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||  |||| ||||||||||| | |||||||||||||| ||| ||||||||||||| |||||    
T  13164392 aattgttgttcccacatttagtttggctatgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaa 13164315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 13158373 - 13158449
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||||||||  |||| || || ||||| | ||||||| |||||||||| ||||||||||||||||||    
T  13158373 aattgttgttcccacttttactttgcctgtgtcacacgagtaaattattcaaatacccctcggcagttaactgccga 13158449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 13163229 - 13163305
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||||||||  |||| || || ||||| | ||||||| |||||||||| ||||||||||||||||||    
T  13163229 aattgttgttcccacttttactttgcctgtgtcacacgagtaaattattcaaatacccctcggcagttaactgccga 13163305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 13382566 - 13382673
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||||||||||||| |||| |||| || |||||||| | ||||||||||||||  ||||||| ||| ||||| ||||| |||||| ||  |||| ||||    
T  13382566 aattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgtccttcggtagtaaactgacgaagtttttaggaaaccggcggcag 13382665  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  13382666 ttaactgc 13382673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 14012455 - 14012404
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  14012455 cccttcagcagttaactgccgaagttttagaaatccggcttcagttaactgc 14012404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 15888879 - 15888829
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  15888879 ccttcggcagttaactaccgaagttttagaaaaccggctgcagttaactgc 15888829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 533 - 574
Target Start/End: Complemental strand, 11840321 - 11840280
Alignment:
Q  533 agttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  11840321 agttaactgccgaagttttagaaattcggctgcagttaactg 11840280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 9048063 - 9048117
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  9048063 aaatgcccttcggcagttaactgccgaagtttgaaaaaaccggctgcagttaact 9048117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 29097904 - 29097857
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||||||| |||| |||||||||| |||||||||||||||||    
T  29097904 tcggcaattaactgtcgaaattttagaaatccggctgcagttaactgc 29097857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 31151114 - 31151067
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| |||| |||| ||||| |||||||||||||||||    
T  31151114 tcggcagttaactgtcgaaatttttgaaatccggctgcagttaactgc 31151067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 9049169 - 9049115
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||||| ||||||||||||||||||| | |||  |||||||||||||||    
T  9049169 aaatgcccttcgacagttaactgccgaagtttgaaaaaaccggctgcagttaact 9049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 22305102 - 22305152
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  22305102 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 22305152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 28249822 - 28249904
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||  ||| |||| |||| || |||||||| | |||||||||||||| | | ||| ||||||| ||||||||||||    
T  28249822 aattgttgtttacacatttggtttggctgtgccacacgagtaaattactcaaatgctcctcgacagttaaatgccgaagtttt 28249904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 32222517 - 32222571
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||||||||||||||||| ||||||| | |||  |||||||||||||||    
T  32222517 aaatgcccttcggcagttaactgctgaagtttgaaaaaatcggctgcagttaact 32222571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 29061293 - 29061338
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  29061293 tcggcagttaactgccgaggaattagaaattcggctgcagttaact 29061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 29065737 - 29065782
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  29065737 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 29074750 - 29074795
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  29074750 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 29079514 - 29079559
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  29079514 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 29107323 - 29107368
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  29107323 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 572
Target Start/End: Complemental strand, 32223590 - 32223545
Alignment:
Q  527 ttcggcagttaactgccgaagttttagaaatacggctgcagttaac 572  Q
    |||||||||||||||||||||||| | |||  ||||||||||||||    
T  32223590 ttcggcagttaactgccgaagtttgaaaaaatcggctgcagttaac 32223545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 545
Target Start/End: Original strand, 35096649 - 35096685
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||| |||||||| |||||||||||||    
T  35096649 taaattactcaaatgcccttcggtagttaactgccga 35096685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 35177590 - 35177646
Alignment:
Q  518 caaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||| |||||||||||| ||| ||||| | |  ||||||||||||||||    
T  35177590 caaatacccttctgcagttaactgctgaaattttaaagaatcggctgcagttaactg 35177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 27739702 - 27739596
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27739702 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 27739603  T
Q  569 taactgc 575  Q
    |||||||    
T  27739602 taactgc 27739596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 12897762 - 12897868
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| |||| || |||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  12897762 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcagcagttaactgccgaagttttagaaatacggctgcagt 12897861  T
Q  569 taactgc 575  Q
    |||||||    
T  12897862 taactgc 12897868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 28817136 - 28817030
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28817136 aattgatgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccaaagttttagaaatacggctgcagt 28817037  T
Q  569 taactgc 575  Q
    |||||||    
T  28817036 taactgc 28817030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 11249659 - 11249553
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||  |||| || |||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  11249659 aattgctgttcccacttttactttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgctgaagttttagaaatatggctgcagt 11249560  T
Q  569 taactgc 575  Q
    |||||||    
T  11249559 taactgc 11249553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 34543271 - 34543165
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| |||| || |||||||  | ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  34543271 aattgttgttcccacatttggtttggctgtgccacatgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcagt 34543172  T
Q  569 taactgc 575  Q
    |||||||    
T  34543171 taactgc 34543165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 19988397 - 19988503
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||| ||| |||| |||| || |||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  19988397 aattgctgttctcacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgcagt 19988496  T
Q  569 taactgc 575  Q
    | |||||    
T  19988497 tgactgc 19988503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 50998815 - 50998709
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||| | |||| |||| || |||||||| | |||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||    
T  50998815 aattgttgttcccgcatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttataaatccggctgcagt 50998716  T
Q  569 taactgc 575  Q
    |||||||    
T  50998715 taactgc 50998709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 471 - 575
Target Start/End: Original strand, 4002680 - 4002784
Alignment:
Q  471 ttgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagtta 570  Q
    ||||||||||||| |||| |||| || |||||||| | |||||| ||||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||    
T  4002680 ttgttgttcccacatttggtttggctgtgccacacgagtaaattgctcaaatgcccctcggcatttaattgccgaagttttagaaatccggctgcagtta 4002779  T
Q  571 actgc 575  Q
    |||||    
T  4002780 actgc 4002784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 11094050 - 11094155
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||  |||| || ||||| | || ||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||    
T  11094050 aattgctgttcccacttttactttggctgtgccatagaagtaaattactcaaatatccttcggtagttatctgccgaagttttagaaatac-gctgcagt 11094148  T
Q  569 taactgc 575  Q
    |||||||    
T  11094149 taactgc 11094155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 469 - 574
Target Start/End: Original strand, 10491965 - 10492070
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| ||||||||| || ||||| |  | ||||||||||||||  || |||| ||||||||| ||||||||||||||||||||||||||    
T  10491965 aattgatgttcccacgtttgatttggctgtgccatatgagtaaattactcaaatgtccatcggtagttaactgtcgaagttttagaaatacggctgcagt 10492064  T
Q  569 taactg 574  Q
    ||||||    
T  10492065 taactg 10492070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 26245273 - 26245350
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||||||||||||||||| || || |||||||| | |||||||||||||||||| |||||||||||||||||||    
T  26245273 aattgttgttcccacttttgatatggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaa 26245350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 19750026 - 19750086
Alignment:
Q  515 actcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19750026 actcaaatacccctcggcagttaactgccgaaattttagaaatacggctgcagttaactgc 19750086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 14043989 - 14043927
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  14043989 ttacccaaatacccttcggcagttaactgtcgaagttttagaaaatcggctgcagttaactgc 14043927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 24703510 - 24703444
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  24703510 taaattactcaaatgcccctcggcagttaactaccgaagttttagaaattcggatgcagttaactgc 24703444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 551
Target Start/End: Original strand, 2645398 - 2645475
Alignment:
Q  474 ttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||| |||| |||| ||||||||||||| |||||||| |||||  || ||||||||||||||||||||||||    
T  2645398 ttgttcccacatttggtttggctatgccacacaagtaaattacacaaatgtccctcggcagttaactgccgaagtttt 2645475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 11095219 - 11095142
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||| |||| ||||||||||| | |||||||||||||| ||| |||||||||| ||||||||    
T  11095219 aattgttgttcccacgtttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagttagctgccgaa 11095142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 542
Target Start/End: Complemental strand, 19750148 - 19750075
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgc 542  Q
    |||||||||||||||||||| |||| || |||||| | | |||||||||||||||||| |||||||||||||||    
T  19750148 aattgttgttcccacttttggtttggctgtgccacgcgagtaaattactcaaatacccctcggcagttaactgc 19750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 27738546 - 27738623
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||| ||||||||||| |||| | ||| |||| ||||| |||||||||||||||||||||||    
T  27738546 aattgttgttcccacatttggtttgactatgctacacgagtaatttacccaaatgcccttcggcagttaactgccgaa 27738623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 2062373 - 2062429
Alignment:
Q  518 caaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  2062373 caaatacccttcggcagttaactgccgaagttttagaaaactggctgcagttaactg 2062429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 55385134 - 55385181
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  55385134 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 55385181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 2271391 - 2271342
Alignment:
Q  526 cttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  2271391 cttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgc 2271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 16851064 - 16851141
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||  |||| ||||||||||| | ||| |||||||||| ||| |||||||||||||||||||    
T  16851064 aattgttgttcccacatttagtttggctatgccacacgagtaatttactcaaatgcccctcggcagttaactgccgaa 16851141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 19842475 - 19842548
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||| ||||| | |  |||||||||||||||||    
T  19842475 acacaagtaaattattcaaatgcccttcggcagttaactgccgaaattttaaagaatcggctgcagttaactgc 19842548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 573
Target Start/End: Original strand, 2266968 - 2267072
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| |  || ||||| | |||||||||||||| ||| ||| ||||||| || |||||||||||| || ||||||||||    
T  2266968 aattgatgttcccacatttggtttggccgtgtcacacgagtaaattactcaaatgcccctcgacagttaattgtcgaagttttagatatccggctgcagt 2267067  T
Q  569 taact 573  Q
    |||||    
T  2267068 taact 2267072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 545
Target Start/End: Complemental strand, 16852160 - 16852089
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||||||||| |||| || |||||||| |     |||||||||||||||||||||||||||||||||    
T  16852160 aattgttgttcccacttttggtttggctgtgccacacga-----ttactcaaatacccttcggcagttaactgccga 16852089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 16647223 - 16647176
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  16647223 tcggcagttaactgccgatgttttagaaatccggctgcagttaactgc 16647176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 43478906 - 43478859
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  43478906 tcggcagttaactgctgaagttttagaaatccggctgcagttaactgc 43478859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 13743271 - 13743337
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| ||||||||| |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  13743271 taaattacccaaatacccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 13743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 528 - 574
Target Start/End: Original strand, 48246409 - 48246455
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  48246409 tcggcagttaactgctgaagttttagaaatccggctgcagttaactg 48246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 4004881 - 4004832
Alignment:
Q  526 cttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  4004881 cttcggtagttaattgccgaagttttagaaatccggctgcagttaactgc 4004832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 4331905 - 4331849
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||| ||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  4331905 aaatatccttcggcagttaactgccgaagttttagtaaaccggcggcagttaactgc 4331849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 7941098 - 7941154
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||| ||||| | |  |||||||||||||||||    
T  7941098 aaatacccttcggcagttaactgccgaaattttaaagaaccggctgcagttaactgc 7941154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 16611088 - 16611144
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||||||||||||||| |||||||||||||||  |||| ||||||||||||    
T  16611088 aaatgcccttcggcagttaactaccgaagttttagaaaaccggcggcagttaactgc 16611144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 22048165 - 22048109
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||||||||||||||| |||||||||||||||  |||| ||||||||||||    
T  22048165 aaatgcccttcggcagttaactaccgaagttttagaaaaccggcggcagttaactgc 22048109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 2743368 - 2743442
Alignment:
Q  502 acacaaataaattactcaaata-cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||| |||||| ||| |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  2743368 acacaagtaaattacccaaatatcccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 2743442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 8475820 - 8475870
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  8475820 ccttcggcagttaactgccgaagttttagtaaaccggcggcagttaactgc 8475870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 12898822 - 12898745
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||| | ||| |||| ||||| ||| ||| |||||||||||||||    
T  12898822 aattgctgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccctcgacagttaactgccgaa 12898745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 36134318 - 36134367
Alignment:
Q  526 cttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||| |||||||||||||||| || ||||||||||||||    
T  36134318 cttcggaagttaactaccgaagttttagaaatccgtctgcagttaactgc 36134367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 4015214 - 4015158
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||||||||| ||  |||| | ||||||||||    
T  4015214 aaatgcccttcggcagttaactgccgaagttttagtaaaccggcgggagttaactgc 4015158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 43476188 - 43476236
Alignment:
Q  528 tcggcagttaactgccgaagttttag-aaatacggctgcagttaactgc 575  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  43476188 tcggaagttaactgccgaagttttagaaaatccggctgcagttaactgc 43476236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 596781 - 596828
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||||||||||||  |||| |||||||||||||||||    
T  596781 tcggcaattaactgccgaagttttgtaaattcggctgcagttaactgc 596828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 509 - 552
Target Start/End: Complemental strand, 7942100 - 7942057
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagtttta 552  Q
    |||||||||||||||| | ||||||||||||||||||| |||||    
T  7942100 taaattactcaaatactcctcggcagttaactgccgaaatttta 7942057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 574
Target Start/End: Complemental strand, 600616 - 600574
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||||||||| ||||| |||| |||||||||||    
T  600616 cagttaactgccgaagttttggaaatccggccgcagttaactg 600574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 2647778 - 2647728
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  2647778 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 2647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 13747813 - 13747747
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||  ||||||| | |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  13747813 taaattatccaaatactcctcggcagttaactgccgatgaatttgaaatccggctgcagttaactgc 13747747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 45076341 - 45076279
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||| |||||||||||||||||||||| ||||| | |  |||||| ||||||||||    
T  45076341 ttacccaaatatccttcggcagttaactgccgaaattttaaagaaccggctgtagttaactgc 45076279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 546
Target Start/End: Complemental strand, 1294172 - 1294135
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  1294172 taaattacccaaatacccctcggcagttaactgccgaa 1294135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 574
Target Start/End: Complemental strand, 4008458 - 4008353
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| |  |||||||| | ||  ||||  |||| |||||||||||| |||||||||| |||||| ||  |||| |||||    
T  4008458 aattgctgttcccacatttggtttggccgtgccacacgagtattttacaaaaatgcccttcggcagtaaactgccgaaattttagtaaaccggcggcagt 4008359  T
Q  569 taactg 574  Q
    ||||||    
T  4008358 taactg 4008353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 11248495 - 11248572
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| |||||||| || | ||||||| |||||| | | |||||||||||||| ||||    
T  11248495 aattgatgttcccacatttggtttggctatgccatacgagtaaattattcaaatgctcctcggcagttaactgtcgaa 11248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 16444574 - 16444627
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  16444574 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 16444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 573
Target Start/End: Original strand, 17561760 - 17561801
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||||||||| |||||||||  |||||||||||||||    
T  17561760 cagttaactgccgaaattttagaaaaccggctgcagttaact 17561801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Complemental strand, 19341670 - 19341625
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||    
T  19341670 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 19341625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 34045374 - 34045427
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  34045374 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 34045427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 575
Target Start/End: Original strand, 42900116 - 42900221
Alignment:
Q  471 ttgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt-agaaatacggctgcagtt 569  Q
    ||||||||||||| | |  |||| || |||||||| | |||| |||  |||| ||||||||||||||||||| |||||||| || ||  |||| ||||||    
T  42900116 ttgttgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgctgaagttttgagtaaaccggcggcagtt 42900215  T
Q  570 aactgc 575  Q
    ||||||    
T  42900216 aactgc 42900221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 42904289 - 42904236
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  42904289 tgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttt 42904236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 46388924 - 46388977
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  46388924 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 46388977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 573
Target Start/End: Original strand, 24700699 - 24700763
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||| | | |||||||||||||| ||| |  |||||||| ||| |||||||||||    
T  24700699 taaattactcaaatgctcatcggcagttaactgtcgaggaattagaaatccggttgcagttaact 24700763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 26246354 - 26246286
Alignment:
Q  477 ttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    ||||||| |||| |||| ||||||||||| | ||| ||||| |||| ||| ||| ||||||||||||||    
T  26246354 ttcccacatttggtttggctatgccacacgattaatttactaaaatgcccctcgacagttaactgccga 26246286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 32200277 - 32200245
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||||||||||||||||||| ||||||    
T  32200277 aaatacccttcggcagttaactgccggagtttt 32200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 42166487 - 42166439
Alignment:
Q  527 ttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||||||||| ||  |||| ||||| ||||||    
T  42166487 ttcggcagttaactgccgaagttttagtaaaccggcggcagtaaactgc 42166439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 5533160 - 5533054
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||||||||||||| || |||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  5533160 aattgttgttcccacttttgatttggctgtgccacacgagtaaattactcaaatacccctcagcagttaactgccgaagttttagaaatacggctgcagt 5533061  T
Q  569 taactgc 575  Q
    |||||||    
T  5533060 taactgc 5533054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 28617506 - 28617612
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28617506 aattgctgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 28617605  T
Q  569 taactgc 575  Q
    |||||||    
T  28617606 taactgc 28617612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 38604383 - 38604277
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| |||| || |||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  38604383 aattgttgttcccacttttggtttggctgtgccacccaagtaaattactcaaatacccctcgacagttaactgccgaagttttagaaatacggctgcagt 38604284  T
Q  569 taactgc 575  Q
    |||||||    
T  38604283 taactgc 38604277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 44842009 - 44841903
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| |||| || |||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  44842009 aattgttgttcccacttttggtttggctgtgccacacaagtaaattagtcaaatacccctcagcagttaactgccgaagttttagaaatacggttgcagt 44841910  T
Q  569 taactgc 575  Q
    |||||||    
T  44841909 taactgc 44841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 27501538 - 27501644
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  27501538 aattgctgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacctctcggcagttaactaccgaagttttagaaatacggctgcagt 27501637  T
Q  569 taactgc 575  Q
    |||||||    
T  27501638 taactgc 27501644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 469 - 573
Target Start/End: Complemental strand, 43363395 - 43363291
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  43363395 aattgatgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacctctcggcacttaactgccgaagttttagaaatacggctgcagt 43363296  T
Q  569 taact 573  Q
    |||||    
T  43363295 taact 43363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 44933797 - 44933903
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| |  |||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  44933797 aattggtgttcccacatttggtttggcactgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgcagt 44933896  T
Q  569 taactgc 575  Q
    |||||||    
T  44933897 taactgc 44933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 2335283 - 2335177
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| | |  |||| || |||||||| | |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  2335283 aattgttgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagt 2335184  T
Q  569 taactgc 575  Q
    |||||||    
T  2335183 taactgc 2335177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 32583990 - 32584096
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||  |||  || |||||||| | |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  32583990 aattgctgttcccacttttactttagctgtgccacacgagtaaattactcaaatacccctcggtagttaactgtcgaagttttagaaatacggctgcagt 32584089  T
Q  569 taactgc 575  Q
    |||||||    
T  32584090 taactgc 32584096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 22551000 - 22550894
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||  ||| ||||||  | || |||||||| | ||| ||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22551000 aattgttgtttacacatttgataaggctgtgccacacgagtaatttacctaaatgcccttcggcagttaactgccgaagttttagaaatccggctgcagt 22550901  T
Q  569 taactgc 575  Q
    |||||||    
T  22550900 taactgc 22550894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 469 - 541
Target Start/End: Complemental strand, 915770 - 915698
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactg 541  Q
    |||||||||||||||||||| |||| || |||||||| | |||||||||||||||||||||| ||||||||||    
T  915770 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcgacagttaactg 915698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 469 - 545
Target Start/End: Complemental strand, 31185580 - 31185504
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||||||||| |||| || |||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  31185580 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaattgccga 31185504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 15030821 - 15030928
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||||||||||||| |||| |||| || |||||||| | |||||||||||||| |||||||| ||| ||||||||||| |||||| ||  |||| ||||    
T  15030821 aattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcag 15030920  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  15030921 ttaactgc 15030928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 45066497 - 45066390
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||||||||||||| |||| |||| || |||||||| | |||||||||||||| |||||||| ||| ||||||||||| |||||| ||  |||| ||||    
T  45066497 aattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcag 45066398  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  45066397 ttaactgc 45066390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 22547457 - 22547511
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22547457 aaatgcccttcggcagttaactgccgaagttttagaaatccggctgcagttaact 22547511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 28618571 - 28618494
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||||| ||| |||| ||||| |||||||||||||||||||||||    
T  28618571 aattgctgttcccacatttggtttggctatgccacacaagtaatttacccaaatgcccttcggcagttaactgccgaa 28618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 513 - 573
Target Start/End: Original strand, 31745164 - 31745224
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| |||||||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  31745164 ttacccaaatacccttcggtagttaactgccgaagttttagaaaaacagctgcagttaact 31745224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 27502700 - 27502623
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||||||| || |||| |||| ||||||||||| | |||||||||||||| ||| |||||||||||||| ||||    
T  27502700 aattgttgttcctacatttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagttaactgtcgaa 27502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 542
Target Start/End: Original strand, 43362261 - 43362334
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgc 542  Q
    ||||||||||||||| |||| |||||||||| ||||| | |||||||||||||| ||  |||||||||||||||    
T  43362261 aattgttgttcccacatttggtttgactatgtcacacgagtaaattactcaaatgcctctcggcagttaactgc 43362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 546
Target Start/End: Original strand, 5532405 - 5532476
Alignment:
Q  475 tgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||| |||| |||| ||||||||||| | ||| |||| ||||| |||||||||||||||||||||||    
T  5532405 tgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa 5532476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 34235199 - 34235152
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  34235199 tcggcagttaactgccgaagttttagaaattcggctacagttaactgc 34235152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 39601705 - 39601748
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  39601705 cagttaactgccgaagttttagaaatccggctgcagttaactgc 39601748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 914658 - 914732
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgcc 543  Q
    ||||||||||||||| |||| |||| |||||||| || | ||| |||| ||||| ||||||||||||||||||||    
T  914658 aattgttgttcccacatttggtttggctatgccagacgagtaatttacccaaatgcccttcggcagttaactgcc 914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 550
Target Start/End: Complemental strand, 12207307 - 12207259
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttt 550  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  12207307 acacgaataaattactcaaatgcccatcggcagttaactgccgaagttt 12207259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 550
Target Start/End: Complemental strand, 12451735 - 12451687
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttt 550  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  12451735 acacgaataaattactcaaatgcccatcggcagttaactgccgaagttt 12451687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 45409859 - 45409915
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  45409859 aaatgcccttcggcagttaactgccgaagttttagtaaatcggcggcagttaactgc 45409915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 13783199 - 13783137
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||| ||||||||||||||| |||| ||||| | |  |||||||||||||||||    
T  13783199 ttactcaaataccattcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgc 13783137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 28694056 - 28694122
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||  || |||||||||||||||||||||||   |||  |||||||||||||||||    
T  28694056 taaattactcaaatgtccctcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgc 28694122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 7121888 - 7121815
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||||||||| ||  |||||||||||||| |||| ||||| | |  |||||||||||||||||    
T  7121888 acacaagtaaattactcaaatgcctctcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgc 7121815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 20854614 - 20854659
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||    
T  20854614 tcggcagttaactgccgaagttttagaaaaccggcggcagttaact 20854659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 546
Target Start/End: Complemental strand, 32585117 - 32585048
Alignment:
Q  477 ttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||| |||| |||| ||||||||||| | ||||||||||||||  || |||| ||||||||||||||    
T  32585117 ttcccacatttggtttggctatgccacacgagtaaattactcaaatgtccctcggtagttaactgccgaa 32585048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 532 - 573
Target Start/End: Original strand, 34366912 - 34366953
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  34366912 cagttaactgccgaagttttataaatccggctgcagttaact 34366953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 38134214 - 38134141
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||||||||| ||| |||||||||||||| | || ||||| | |  |||||||||||||||||    
T  38134214 acacaagtaaattactcaaatgcccatcggcagttaactgtcaaaattttaaagaaccggctgcagttaactgc 38134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 10749759 - 10749703
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||||||||| ||  | || ||||||||||||    
T  10749759 aaatgcccttcggcagttaactgccgaagttttagtaaaccagcggcagttaactgc 10749703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 36127369 - 36127416
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||||||||||||||  |||||| ||||||||||    
T  36127369 tcggcagttaactgacgaagttttagaaaaccggctgaagttaactgc 36127416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 575
Target Start/End: Complemental strand, 39939287 - 39939244
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||| || ||||||||||||||| |||||||||||||||||    
T  39939287 cagttaattgtcgaagttttagaaatccggctgcagttaactgc 39939244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 16939362 - 16939424
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||| |||||||||||||||| ||| ||||| | |  |||||||||||||||||    
T  16939362 ttacccaaatacctttcggcagttaactgctgaaattttaaagaaccggctgcagttaactgc 16939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 39831144 - 39831198
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||| |||| |||||||||||||| |||||||||  |||||||||||||||    
T  39831144 aaatgcccctcggtagttaactgccgaaattttagaaaaccggctgcagttaact 39831198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 40740888 - 40740950
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||| |||||| ||||||||||||||| ||||| | |  |||||||||||||||||    
T  40740888 ttacccaaatatccttcgacagttaactgccgaaattttaaagaaccggctgcagttaactgc 40740950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 41016400 - 41016458
Alignment:
Q  517 tcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||| ||| ||||||||| |||||||||||||||| |  ||||||||||||||    
T  41016400 tcaaatgcccctcgacagttaactaccgaagttttagaaatccaactgcagttaactgc 41016458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 552
Target Start/End: Complemental strand, 41472148 - 41472066
Alignment:
Q  470 attgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttta 552  Q
    |||||||||| ||| ||||||||| ||  |  |||| | ||| |||| ||||||||||||| ||||||||||||||| |||||    
T  41472148 attgttgttcacacatttgatttggctgagaaacacgagtaatttacccaaatacccttcgacagttaactgccgaaatttta 41472066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 22510514 - 22510567
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  22510514 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 22510567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 26659420 - 26659473
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  26659420 tgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttt 26659473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 550
Target Start/End: Complemental strand, 39277556 - 39277515
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttt 550  Q
    ||||||| |||||| ||| |||||||||||||||||||||||    
T  39277556 taaattattcaaatgcccctcggcagttaactgccgaagttt 39277515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 25620 - 25588
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagtttt 551  Q
    |||| ||||||||||||||||||||||||||||    
T  25620 aaatgcccttcggcagttaactgccgaagtttt 25588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 34371931 - 34371875
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||| ||||||||||||||||||||||| ||  |||| ||||| ||||||    
T  34371931 aaatgcccttcagcagttaactgccgaagttttagtaaaccggcggcagtaaactgc 34371875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 573
Target Start/End: Original strand, 41471071 - 41471135
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||||||||  |||||| |||||||||| |||| ||||| | |  |||||||||||||||    
T  41471071 taaattactcaaatgtccttcgacagttaactgtcgaaattttaaagaatcggctgcagttaact 41471135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 525 - 573
Target Start/End: Original strand, 44726499 - 44726547
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||||||||||| |||||||| | |||  |||||||||||||||    
T  44726499 ccttcggcagttaactgtcgaagtttgaaaaaatcggctgcagttaact 44726547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 44727583 - 44727536
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||| |||||||||||||||| | ||| ||||||||||||||||    
T  44727583 ccttcggcaattaactgccgaagtttga-aaaaacggctgcagttaact 44727536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 44885711 - 44885759
Alignment:
Q  527 ttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||  |||||||||||||  ||| |||||||||||||    
T  44885711 ttcggcagttaactgttgaagttttagaaaatcggttgcagttaactgc 44885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 5e-39; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 23220616 - 23220722
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| |||| || |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23220616 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaataccctttggcagttaactgccgaagttttagaaatacggctgcagt 23220715  T
Q  569 taactgc 575  Q
    |||||||    
T  23220716 taactgc 23220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 40833745 - 40833639
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||  |||| || |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40833745 aattgttgttcccacttttactttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagt 40833646  T
Q  569 taactgc 575  Q
    |||||||    
T  40833645 taactgc 40833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 21023023 - 21022917
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| || |||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  21023023 aattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgcagt 21022924  T
Q  569 taactgc 575  Q
    |||||||    
T  21022923 taactgc 21022917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 481 - 575
Target Start/End: Complemental strand, 38369305 - 38369211
Alignment:
Q  481 cacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| |||| || ||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38369305 cacttttggtttggctgtgccatacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 38369211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 469 - 574
Target Start/End: Original strand, 50446946 - 50447051
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| ||||||| || || |||| |||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  50446946 aattgttgttcccacatttggtttgactgtgtcatacaagtaaattactcaaatgctcttcggcagttaactgccgaagttttaaaaatacggctgcagt 50447045  T
Q  569 taactg 574  Q
    ||||||    
T  50447046 taactg 50447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 46254583 - 46254477
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||  |||| || |||||||||| ||||||| ||||||| |  |||| ||||||||||||||||||||||||||||||||||||    
T  46254583 aattgttgttcccacttttagtttggctgtgccacacaagtaaattattcaaatatctctcggtagttaactgccgaagttttagaaatacggctgcagt 46254484  T
Q  569 taactgc 575  Q
    |||||||    
T  46254483 taactgc 46254477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 7485796 - 7485690
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| |||| ||||||||||| | ||| |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| |    
T  7485796 aattgttgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccctcggcagttaactgtcgaagttttagaaatacggctgcaat 7485697  T
Q  569 taactgc 575  Q
    |||||||    
T  7485696 taactgc 7485690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 51037603 - 51037497
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||  |||| || |||||||| | ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||| |    
T  51037603 aattgttgttcccacatttagtttggctgtgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcaat 51037504  T
Q  569 taactgc 575  Q
    |||||||    
T  51037503 taactgc 51037497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 31242153 - 31242260
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||| ||| ||||| |||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||||||| |||||| ||  |||| ||||    
T  31242153 aattgctgtgcccacatttgatttgactgtgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcag 31242252  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  31242253 ttaactgc 31242260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 14200539 - 14200605
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  14200539 taaattactcaaatatccctcggcagttaactgtcgaagttttagaaatacggctgcagttaactgc 14200605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 21015677 - 21015783
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||| ||  |||| ||||  | ||||| || | |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  21015677 aattgttgttctcatatttggtttggttgtgccatacgagtaaattactcaaatacccctcggcagttaactgtcgaagttttagaaatacgggtgcagt 21015776  T
Q  569 taactgc 575  Q
    |||||||    
T  21015777 taactgc 21015783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 26792380 - 26792273
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||||||||||||| |||| |||| || |||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||| ||  |||| ||||    
T  26792380 aattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggcaattaactgccgaagtttttagtaaaccggcggcag 26792281  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  26792280 ttaactgc 26792273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 14201662 - 14201585
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||| | |||||||||||||| ||| |||||||||||||||||||    
T  14201662 aattgctgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaa 14201585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 23221802 - 23221725
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||| |||| ||||||||||| | ||| ||| |||||| |||||||||||||||||||||||    
T  23221802 aattgttgttcccacatttggtttggctatgccacacgagtaatttattcaaatgcccttcggcagttaactgccgaa 23221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 55587296 - 55587373
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||| |||| ||||||||||| | ||| |||| ||||| |||||||||||||||||||||||    
T  55587296 aattgttgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa 55587373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 504 - 575
Target Start/End: Original strand, 3403820 - 3403891
Alignment:
Q  504 acaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||| |||||||||||||||||||||||||||| |  || ||||| |||||||||||||||||    
T  3403820 acaagtaaattacgcaaatacccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 3403891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 16984237 - 16984190
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  16984237 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 16984190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 28081451 - 28081502
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  28081451 cccttcggcagttaactgccgaagttttagaaatccgactgcagttaactgc 28081502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 39590644 - 39590597
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  39590644 tcggcagttaactgccgaagttttagaaatacagctgcagttaactgc 39590597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 28084090 - 28084019
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||||||||||||||| |  ||||||| |||||||||||||||||||||| | |||||||||||||||    
T  28084090 acacaagtaaattactcaaatatc--tcggcagataactgccgaagttttagaaatccagctgcagttaactgc 28084019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 55588419 - 55588342
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||| | ||| |||| ||||| |||||||||||||||||||||||    
T  55588419 aattgctgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa 55588342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 575
Target Start/End: Complemental strand, 34530874 - 34530798
Alignment:
Q  499 gccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||| ||||| ||||  ||||  ||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  34530874 gccacacgaataatttacctaaatgtccttcggcagttaactgtcgaagttttagaaatctggctgcagttaactgc 34530798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 16983519 - 16983566
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  16983519 tcggcagttaactgccgaagttttagaaatccggctacagttaactgc 16983566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 18884599 - 18884533
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||  |||  |||||||||||||||||    
T  18884599 taaattactcaaatgcccctcggcagttaactgccgaaattttgaaaaaccggctgcagttaactgc 18884533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 40832584 - 40832658
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgcc 543  Q
    ||||| ||||||||| |||| |||| ||||||||||| | ||||||| |||||| ||| ||||||||||||||||    
T  40832584 aattgctgttcccacatttggtttggctatgccacacgagtaaattattcaaatgcccctcggcagttaactgcc 40832658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 28235646 - 28235590
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  28235646 aaatgcccttcggcagttaactgccgaagttttagtaaaccggcggcagttaactgc 28235590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 469 - 573
Target Start/End: Complemental strand, 50197045 - 50196941
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||  ||| ||||||||| ||| | ||||| ||||| ||||  |||| ||| ||||||||||||| |||||||||||||||   | |||||||    
T  50197045 aattgttgttgacacatttgatttggctaagacacacgaataatttacctaaatgcccctcggcagttaactaccgaagttttagaaaattgactgcagt 50196946  T
Q  569 taact 573  Q
    |||||    
T  50196945 taact 50196941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 51492068 - 51492115
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  51492068 tcggcaattaactgtcgaagttttagaaatccggctgcagttaactgc 51492115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 3408376 - 3408294
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| |||| ||||  | | |||||| | |||||||||||||| ||||||| |||| |||||||||| ||||    
T  3408376 aattgttgttcccacatttggtttggttgtaccacacgagtaaattactcaaatgcccttcgacagtaaactgccgaaatttt 3408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 16473765 - 16473711
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| |||||||||||||||||||||||||||||| ||  |||| ||||||||||    
T  16473765 aaatgcccttcggcagttaactgccgaagttttagtaaaccggcggcagttaact 16473711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 51036485 - 51036547
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||| ||| ||| |||||| ||| |||||||||||||||||||||| ||||||||||    
T  51036485 ttacccaaatgcccctcgacagttagctgtcgaagttttagaaatacggctgtagttaactgc 51036547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 7484668 - 7484745
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||| | ||| |||  ||||| ||| |||||||||||||||||||    
T  7484668 aattgatgttcccacatttggtttggctatgccacacgagtaatttatccaaatgcccctcggcagttaactgccgaa 7484745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 38368169 - 38368246
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||  |||| ||||||||||| | ||| |||  |||||  ||||||||||||||||||||||    
T  38368169 aattgttgttcccacatttagtttggctatgccacacgagtaatttatccaaatgtccttcggcagttaactgccgaa 38368246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 44674163 - 44674208
Alignment:
Q  530 ggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||    
T  44674163 ggcagttaactgccgaagtttaagaaacccggctgcagttaactgc 44674208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 546
Target Start/End: Original strand, 46253453 - 46253501
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||| | |||||||||||||| ||| |||||||||||||||||||    
T  46253453 tgccacacgagtaaattactcaaatgcccatcggcagttaactgccgaa 46253501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 571
Target Start/End: Complemental strand, 50023632 - 50023580
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaa 571  Q
    |||| ||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  50023632 aaatgcccctcggcagttaactgccaaagttttagaaaatcggctgcagttaa 50023580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 571
Target Start/End: Complemental strand, 50030750 - 50030698
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaa 571  Q
    |||| ||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  50030750 aaatgcccctcggcagttaactgccaaagttttagaaaatcggctgcagttaa 50030698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 509 - 552
Target Start/End: Original strand, 27872357 - 27872400
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagtttta 552  Q
    ||||||||||||||| || ||||||||||||||||||| |||||    
T  27872357 taaattactcaaatatccatcggcagttaactgccgaaatttta 27872400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 49889680 - 49889727
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| |||||||||||||||  || |||||||||||||    
T  49889680 tcggcagttaactgtcgaagttttagaaatctggttgcagttaactgc 49889727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 50274757 - 50274804
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||||    
T  50274757 tcggcagttaactgccgaggaattagaaatccggctgcagttaactgc 50274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 3183975 - 3184025
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||||||||||||||||| ||  |||| ||||||||||||    
T  3183975 ccttcgacagttaactgccgaagttttagtaaaccggcggcagttaactgc 3184025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 6181927 - 6181845
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| | |  | || || |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  6181927 aattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 6181845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 15995692 - 15995766
Alignment:
Q  502 acacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||| |||||||||  ||||||||||| |||||| |  || ||||| |||||||||||||||||    
T  15995692 acacaagtaaattacccaaataccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgc 15995766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 19069157 - 19069231
Alignment:
Q  502 acacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||| |||||||||  ||||||||||| |||||| |  || ||||| |||||||||||||||||    
T  19069157 acacaagtaaattacccaaataccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgc 19069231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 20208488 - 20208554
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||  || |||||||||||||||||||||||   | |  |||||||||||||||||    
T  20208488 taaattactcaaatgtccctcggcagttaactgccgaagtttactagaaccggctgcagttaactgc 20208554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 571
Target Start/End: Complemental strand, 37296280 - 37296218
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaa 571  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| | | |  |||||||||||||    
T  37296280 taaattactcaaatgcccttcgacagttaactgccgaaatttaaaagaaccggctgcagttaa 37296218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 40061246 - 40061192
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||| |||||||||||| ||||||||||||||||  ||| |||||||||||    
T  40061246 aaatgcccatcggcagttaaccgccgaagttttagaaaaccggttgcagttaact 40061192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 48807481 - 48807415
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||  || |||||||||||||| |||| ||||| | |  |||||||||||||||||    
T  48807481 taaattactcaaatgtccctcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgc 48807415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 50020105 - 50020159
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||| || ||||||||||||||||||||||||  ||| |||||||||||    
T  50020105 aaatgccctttggtagttaactgccgaagttttagaaaatcggttgcagttaact 50020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 55793914 - 55793964
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  55793914 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 55793964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 1309221 - 1309168
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  1309221 tgccacacgagtaaaatacaaaaatgcccttcggcagttaactgccgaagtttt 1309168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 9893371 - 9893318
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||| |||| |||  |||| ||||||||||||||||||| ||||||||    
T  9893371 tgccacacaagtaaaatacgaaaatgcccttcggcagttaactgctgaagtttt 9893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 31421672 - 31421725
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  31421672 tgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttt 31421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 37855830 - 37855903
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||||||||| |||||  | ||||||||||||| ||||| ||||| | |  |||||||||||||||||    
T  37855830 acacgaataaattacttaaatattcatcggcagttaacttccgaaattttaaagaaccggctgcagttaactgc 37855903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 571
Target Start/End: Complemental strand, 40354654 - 40354609
Alignment:
Q  526 cttcggcagttaactgccgaagttttagaaatacggctgcagttaa 571  Q
    ||||||||||||||||||||| ||||  |||| |||||||||||||    
T  40354654 cttcggcagttaactgccgaaattttgaaaatccggctgcagttaa 40354609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 575
Target Start/End: Original strand, 48806472 - 48806529
Alignment:
Q  518 caaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| ||||||||||||||| |||| ||||| | |  |||||||||||||||||    
T  48806472 caaatacctttcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgc 48806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 49090413 - 49090466
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  49090413 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 49090466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 545
Target Start/End: Original strand, 6790242 - 6790278
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccga 545  Q
    |||| |||| |||||||||||||||||||||||||||    
T  6790242 taaaatactaaaatacccttcggcagttaactgccga 6790278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 43176713 - 43176657
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||| ||||||||||||||| ||||| | |  | |||||||||||||||    
T  43176713 aaatacccttcgacagttaactgccgaaattttaaagaacctgctgcagttaactgc 43176657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 44680153 - 44680105
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||| |||||||||||||||||||||| ||  |||| ||||||||||    
T  44680153 ccttcgacagttaactgccgaagttttagtaaaccggcggcagttaact 44680105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 553
Target Start/End: Complemental strand, 51494952 - 51494900
Alignment:
Q  501 cacacaaataaattactcaaatacccttcggcagttaactgccgaagttttag 553  Q
    ||||| ||||| ||||  |||| ||||||||||||||||||| ||||||||||    
T  51494952 cacacgaataatttacctaaatgcccttcggcagttaactgcagaagttttag 51494900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 5e-39; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 586740 - 586634
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  586740 aattgctgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 586641  T
Q  569 taactgc 575  Q
    |||||||    
T  586640 taactgc 586634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 4883171 - 4883277
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| |||| || || ||||| | |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  4883171 aattgttgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatacccctcaacagttaactgccgaagttttagaaatacggctgcagt 4883270  T
Q  569 taactgc 575  Q
    |||||||    
T  4883271 taactgc 4883277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 30194399 - 30194465
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30194399 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 30194465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 19914404 - 19914510
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| | |  |||| || |||||||| | |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  19914404 aattgttgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaacttccgaagttttagaaatacggctgcagt 19914503  T
Q  569 taactgc 575  Q
    |||||||    
T  19914504 taactgc 19914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 477 - 575
Target Start/End: Original strand, 19161838 - 19161936
Alignment:
Q  477 ttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||| |||| |||| || |||||||  | |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19161838 ttcccacatttggtttggctgtgccacaagagtaaattactcaaatgcctttcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 19161936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 43011765 - 43011841
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||||||||| |||| || |||||||| | |||||||||||||||||| ||||||||||||||||||    
T  43011765 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccga 43011841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 48228397 - 48228331
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  48228397 taaattactcaaatgtccttcggcagttaactgccgaagttttagaaatctggctgcagttaactgc 48228331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 509 - 570
Target Start/End: Complemental strand, 49429230 - 49429169
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagtta 570  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  49429230 taaattactcaaatgctcttcggcagttaactgccgaagttttagaaatccggctgcagtta 49429169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 469 - 541
Target Start/End: Complemental strand, 30195519 - 30195447
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactg 541  Q
    ||||||||||||||| |||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||||    
T  30195519 aattgttgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccttcggcagttaactg 30195447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 524 - 573
Target Start/End: Original strand, 94402 - 94451
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  94402 cccttcggcagttaactgccgaagttttagaaatccagctgcagttaact 94451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 522 - 575
Target Start/End: Complemental strand, 2425767 - 2425714
Alignment:
Q  522 tacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  2425767 tacccctcggcagttaactgccgaagttttggaaatccggctgcagttaactgc 2425714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 29765605 - 29765558
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29765605 tcggcagttaactgccgaagttttagaaatccggttgcagttaactgc 29765558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 44596858 - 44596905
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  44596858 tcggcagttaactgccgaagttttagaaatccggttgcagttaactgc 44596905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 49426706 - 49426757
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  49426706 cccttcggcagttaaccgccgaagttttagaaatccggctgcaattaactgc 49426757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 571
Target Start/End: Complemental strand, 51271667 - 51271624
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaa 571  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  51271667 tcggcagttaactgccgaagttttagaaatccggctgcagttaa 51271624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 2365172 - 2365254
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||||||||  ||| |||| || |||||||| | ||||| ||  |||| ||||||||||||||||||||||||||||    
T  2365172 aattgttgttcccacaattggtttggctgtgccacacgagtaaatgacctaaatgcccttcggcagttaactgccgaagtttt 2365254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 49661868 - 49661762
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||| || |||| ||||  || ||||||| | ||||||| ||||||   | |||| | |||| || ||||||||||||||||||||||||||    
T  49661868 aattgttgttcctacatttggtttggttaggccacacgagtaaattattcaaatgttcctcggtaattaattgtcgaagttttagaaatacggctgcagt 49661769  T
Q  569 taactgc 575  Q
    |||||||    
T  49661768 taactgc 49661762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 509 - 574
Target Start/End: Original strand, 42290274 - 42290339
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||  ||||||||||||||||    
T  42290274 taaattactcaaatgccccttggcagttaactgccgaaattttaaaaaatcggctgcagttaactg 42290339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 528 - 571
Target Start/End: Complemental strand, 46886463 - 46886420
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaa 571  Q
    |||||||||||||||||||||||||||||| |||||| ||||||    
T  46886463 tcggcagttaactgccgaagttttagaaatccggctgtagttaa 46886420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 22397786 - 22397864
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    |||||||| | |||| |||  ||||||||||||||||||||||||||||||||| || ||  |||| ||||||||||||    
T  22397786 tgccacacgagtaaaataccaaaatacccttcggcagttaactgccgaagttttgagtaaaccggcggcagttaactgc 22397864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 44470106 - 44470040
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||  ||||||||| |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  44470106 taaattatccaaatacccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 44470040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 546
Target Start/End: Complemental strand, 19915410 - 19915373
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||||||||| |||||||||||||||||||||||    
T  19915410 taaattactcaaatgcccttcggcagttaactgccgaa 19915373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 528 - 573
Target Start/End: Complemental strand, 47505961 - 47505916
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  47505961 tcggcagttaattgccgaagttttagaaaatcggctgcagttaact 47505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 551
Target Start/End: Original strand, 50036818 - 50036867
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  50036818 acacaagtaaattactcaaatgtccctcggcagttaactgccgaagtttt 50036867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 528 - 573
Target Start/End: Complemental strand, 50344044 - 50343999
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||    
T  50344044 tcggcagttaactgccgaagttttagaaaaccggcggcagttaact 50343999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 574
Target Start/End: Complemental strand, 41909807 - 41909735
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    ||||||||||||||||||||| | | ||| |||||||||| |||| ||||| | |  ||||||||||||||||    
T  41909807 acacaaataaattactcaaatgctcatcgacagttaactgtcgaaattttaaagaatcggctgcagttaactg 41909735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 47652665 - 47652741
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    ||||| ||||||||| |||| |||| || || ||||| | ||||||||||||||  || ||||||||||||||||||    
T  47652665 aattgctgttcccacgtttggtttggctgtgtcacacgagtaaattactcaaatgtccctcggcagttaactgccga 47652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 43012772 - 43012709
Alignment:
Q  477 ttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaact 540  Q
    ||||||| |||| |||| ||||||||||| | |||||||||||||| || ||||||||| ||||    
T  43012772 ttcccacatttggtttggctatgccacacgagtaaattactcaaatgcctttcggcagtaaact 43012709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 4208378 - 4208440
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||| |||||||||||||||||||||| ||| |   |  |||||||||||||||||    
T  4208378 ttactcaaatatccttcggcagttaactgccgaattttgaaggaaccggctgcagttaactgc 4208440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 6557886 - 6557959
Alignment:
Q  502 acacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| ||||||| ||||||||||  |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  6557886 acacaagtaaatta-tcaaataccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgc 6557959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 13636201 - 13636151
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  13636201 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 13636151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 13761139 - 13761073
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| ||||||||||||||||  | ||||| | |  |||||||||||||||||    
T  13761139 taaattactcaaatgcccctcggcagttaactgcctcaattttaaagaaccggctgcagttaactgc 13761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 14985326 - 14985380
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||||| |||||||||||||||||||||| ||  |||| ||||||||||    
T  14985326 aaatgcccttcgacagttaactgccgaagttttagtaaatcggcggcagttaact 14985380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 19159617 - 19159667
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  19159617 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 19159667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 20349423 - 20349501
Alignment:
Q  498 tgccacacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | ||| |||| |||||||||| ||||||||||||| |||| |  || ||||| |||||||||||||||||    
T  20349423 tgccacaccagtaatttacgcaaataccctctcggcagttaactaccgaggaatttgaaatccggctgcagttaactgc 20349501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 29424368 - 29424422
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||||||||||||| ||||||||||| | |||  |||||||||||||||    
T  29424368 aaatgcccttcggcagttaattgccgaagtttaaaaaaaccggctgcagttaact 29424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 30910106 - 30910032
Alignment:
Q  502 acacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||| |||||||||  |||||||||||||| ||| |  || ||||| |||||||||||||||||    
T  30910106 acacaagtaaattacccaaataccccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgc 30910032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 547
Target Start/End: Original strand, 38632469 - 38632507
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaag 547  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  38632469 taaattactcaaatgcccttcggtagttaactgccgaag 38632507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 38633289 - 38633207
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| | |  |||| || |||||||| | |||||||||||||| || ||||  ||| |||||||||||||||    
T  38633289 aattgttgttcccacatatagtttggctgtgccacacgagtaaattactcaaatgcctttcgatagtaaactgccgaagtttt 38633207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 41453816 - 41453882
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| |||| |||| |||| ||||||||||||| |  || ||||| |||||||||||||||||    
T  41453816 taaattacgcaaacacccctcggtagttaactgccgaggaatttgaaatccggctgcagttaactgc 41453882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 585592 - 585669
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||  |||| ||||||||||  | ||| |||| ||||| |||||||||| ||||||||||||    
T  585592 aattgctgttcccacatttagtttggctatgccacaggagtaatttacccaaatgcccttcggcaattaactgccgaa 585669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 5329094 - 5329167
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||| |||| |||||||| ||| |||||||||||||||| ||||| | |  ||| |||||||||||||    
T  5329094 acacgaataatttacccaaataccattcagcagttaactgccgaaattttaaagaaccggttgcagttaactgc 5329167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 13629370 - 13629423
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  13629370 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 13629423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 573
Target Start/End: Complemental strand, 18609975 - 18609926
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||| |||||||||||||||||||||||| ||  |||| ||||||||||    
T  18609975 ccctttggcagttaactgccgaagttttagtaaaccggcggcagttaact 18609926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 19924721 - 19924774
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  19924721 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 19924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 26875659 - 26875712
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  26875659 tgccacaccagtaaaatacaaaaatgcccttcggcagttaactgccgaagtttt 26875712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 37991550 - 37991626
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||| |||  |||| |||| || | |||||| ||||||||||||||||  || ||| ||||||||||||||    
T  37991550 aattgttgtttccatatttggtttggctgtcccacacgaataaattactcaaatgtccctcgacagttaactgccga 37991626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 36510991 - 36510885
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| |||| || || ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36510991 aattgttgttcccacttttggtttggctgtgtcacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagt 36510892  T
Q  569 taactgc 575  Q
    |||||||    
T  36510891 taactgc 36510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 30803153 - 30803047
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| |||| || |||||||| | ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  30803153 aattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcagt 30803054  T
Q  569 taactgc 575  Q
    |||||||    
T  30803053 taactgc 30803047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 476 - 574
Target Start/End: Original strand, 39489128 - 39489226
Alignment:
Q  476 gttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    ||||||||||||| |||| || |||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  39489128 gttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttacaaatacgactgcagttaactg 39489226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 10424777 - 10424883
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| || |||||||| | |||||||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||    
T  10424777 aattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcagcagttaactgccgaagttttagaaatacggctacagt 10424876  T
Q  569 taactgc 575  Q
    |||||||    
T  10424877 taactgc 10424883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 29074138 - 29074032
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| ||||  | |||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||| | || |||||    
T  29074138 aattgttgttcccacatttggtttggttgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatccagcggcagt 29074039  T
Q  569 taactgc 575  Q
    |||||||    
T  29074038 taactgc 29074032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 3085974 - 3086080
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||  ||||  | |||||||| | ||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |||    
T  3085974 aattgttgttcccacatttagtttggttgtgccacacgagtaaattactcaaatgttcctcggcagttaactgccgaagttttagaaatacggctgtagt 3086073  T
Q  569 taactgc 575  Q
    |||||||    
T  3086074 taactgc 3086080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 572
Target Start/End: Original strand, 29947745 - 29947808
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaac 572  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  29947745 taaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctggagttaac 29947808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 28477202 - 28477096
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| | |  ||||  | |||||||| |  ||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  28477202 aattgttgttcccacatatagtttggttgtgccacacgagcaaattactctaatgcccctcgacagttaactgccgaagttttagaaatacggctgcagt 28477103  T
Q  569 taactgc 575  Q
    |||||||    
T  28477102 taactgc 28477096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 465 - 575
Target Start/End: Complemental strand, 22003541 - 22003430
Alignment:
Q  465 taccaattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggct 563  Q
    ||||||||| ||||||||| |||| |||| || |||||||| | |||||||||||||| |||||||| ||| ||||||||||| |||||| ||  ||||     
T  22003541 taccaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcg 22003442  T
Q  564 gcagttaactgc 575  Q
    ||||||||||||    
T  22003441 gcagttaactgc 22003430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 43619278 - 43619171
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||| ||||||||| |||| |||| || |||||||| | ||||||| |||||| |||||||||||||||||||||||| |||||| ||  |||| ||||    
T  43619278 aattgctgttcccacatttggtttggctgtgccacacgagtaaattaatcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcag 43619179  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  43619178 ttaactgc 43619171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 20937835 - 20937917
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| |||| |||| || |||||||| | ||||||||  |||| ||||||||||||||||||||||||||||    
T  20937835 aattgttgttcccacatttggtttggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttt 20937917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 524 - 573
Target Start/End: Complemental strand, 23347408 - 23347359
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23347408 cccttcggcagttaactgccgaagttttagaaatccggctgcagttaact 23347359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 3943268 - 3943221
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  3943268 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 3943221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 7190027 - 7189980
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  7190027 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 7189980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 23346773 - 23346824
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23346773 cccttcggcagttaactgccgaagttttataaatccggctgcagttaactgc 23346824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 10425895 - 10425848
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  10425895 tcggtagttaactgtcgaagttttagaaatacggctgcagttaactgc 10425848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 573
Target Start/End: Complemental strand, 12252584 - 12252513
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||  ||||||||||||||||| |||| ||||| | |  |||||||||||||||    
T  12252584 acacaaataaattactcaaatgtccttcggcagttaactgtcgaaattttaaagaaccggctgcagttaact 12252513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 556
Target Start/End: Original strand, 33416111 - 33416154
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaa 556  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  33416111 ttactcaaatacccttcggcagttaactaccgaagttttagaaa 33416154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 20951181 - 20951075
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| | ||||  | || |||||||| | ||||||||  |||| |||||||||||||||||||||| |  || ||||| ||||||||||    
T  20951181 aattgctgttcccacatgtgataaggctgtgccacaccagtaaattacctaaatgcccttcggcagttaactgccgaggaatttgaaatccggctgcagt 20951082  T
Q  569 taactgc 575  Q
    |||||||    
T  20951081 taactgc 20951075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 41273333 - 41273277
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  41273333 aaatgcccttcggcagttaactgccgaagttttagtaaatcggcggcagttaactgc 41273277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 43870197 - 43870150
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| || ||||||||| ||||    
T  43870197 tcggcagttaactgccgaagttttagaaatccgactgcagttagctgc 43870150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 3803646 - 3803572
Alignment:
Q  502 acacaaataaattactcaaata-cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||| |||||| ||| |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  3803646 acacaagtaaattacccaaatatcccatcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 3803572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 39947537 - 39947643
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| |||  || |||||||| | ||  ||||  ||||||||||||| ||| ||||| ||||||||||| ||  |||| |||||    
T  39947537 aattgttgttcccacatttggttttgctgtgccacacgagtactttacgaaaatacccttcggtagtaaactgtcgaagttttagtaaaccggcggcagt 39947636  T
Q  569 taactgc 575  Q
    |||||||    
T  39947637 taactgc 39947643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 43312669 - 43312751
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| |||| |||| || | |||||| ||||  ||||  |||| |||||||||||| |||||||||||||||    
T  43312669 aattgttgttcccacatttggtttggctgtaccacacgaatattttacgaaaatgcccttcggcagtaaactgccgaagtttt 43312751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 574
Target Start/End: Complemental strand, 2271832 - 2271767
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||| | |  | ||||||||||||||    
T  2271832 taaattactcaaatacccctcggccgttaactgccgaaattttaaagaatcagctgcagttaactg 2271767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 546
Target Start/End: Original strand, 4286072 - 4286109
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||||||||||||| |||||||||||||||||||    
T  4286072 taaattactcaaatacccatcggcagttaactgccgaa 4286109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 37322212 - 37322140
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||| |||| |||||||||||||||||| ||||  | |  |||||||||||||||||    
T  37322212 acacgaataaattactcaaatgccct-cggcagttaactgccgaaattttgaagaaccggctgcagttaactgc 37322140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 469 - 542
Target Start/End: Complemental strand, 39490098 - 39490025
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgc 542  Q
    ||||||||||||||| |||| |||| |||||||||||   ||||||| ||||||  || |||||||||||||||    
T  39490098 aattgttgttcccacatttggtttggctatgccacacgggtaaattattcaaatgtccctcggcagttaactgc 39490025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 42505869 - 42505816
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||||||||||||||||||||||||||||||||    
T  42505869 tgccacacgagtaaaataccaaaatacccttcggcagttaactgccgaagtttt 42505816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 29401696 - 29401636
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||| |||| ||| |||||||||||||| ||||||||||||||  |||| ||||||||||    
T  29401696 ttacttaaatgcccctcggcagttaactgtcgaagttttagaaaaccggcggcagttaact 29401636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 36509906 - 36509982
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    ||||||||||||||| |||| |||| ||||| ||||| | ||||||||||||||  || |||||||| |||| ||||    
T  36509906 aattgttgttcccacatttggtttggctatgtcacacgagtaaattactcaaatgtccctcggcagtaaactaccga 36509982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 43258812 - 43258764
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||||    
T  43258812 ccttcggcagttaactgccgaagtttgaaaaaaccggctgcagttaact 43258764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 563
Target Start/End: Original strand, 3940931 - 3940969
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggct 563  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  3940931 ccttcggcagttaactgctgaagttttagaaattcggct 3940969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 14002497 - 14002563
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||  || ||||||||||||||| ||| ||||| | |  |||||||||||||||||    
T  14002497 taaattactcaaatgtccctcggcagttaactgctgaaattttaaagaaccggctgcagttaactgc 14002563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 17424126 - 17424176
Alignment:
Q  526 cttcggcagttaactgccgaagttttag-aaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  17424126 cttcggcagttaactgccgaaattttggaaaatccggctgcagttaactgc 17424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 21998180 - 21998258
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | |||||||||||||| |||||||| ||||  ||||||||| |||||| ||  |||| ||||||||||||    
T  21998180 tgccacacgagtaaattactcaaatgcccttcggtagtttgctgccgaagtttttaggaaaccggcggcagttaactgc 21998258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 575
Target Start/End: Complemental strand, 28139691 - 28139585
Alignment:
Q  470 attgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaata-cggctgcagt 568  Q
    |||||||||| ||| ||||||||| ||  |  |||| | ||| ||| |||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |    
T  28139691 attgttgttcacacatttgatttggctgagaaacacgagtaatttattcaaatacccttcgacagttaactaccgaaattttaaaaaaatcggctgcatt 28139592  T
Q  569 taactgc 575  Q
    |||||||    
T  28139591 taactgc 28139585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 28419395 - 28419429
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttag 553  Q
    |||| ||||||||||||||||||||||||||||||    
T  28419395 aaatgcccttcggcagttaactgccgaagttttag 28419429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 575
Target Start/End: Original strand, 29406962 - 29407016
Alignment:
Q  521 atacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||| ||||| | |  |||||||| ||||||||    
T  29406962 atacccttcggcagttaactgccgaaattttaaagaaccggctgcaattaactgc 29407016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 29601231 - 29601193
Alignment:
Q  518 caaatacccttcggcagttaactgccgaagttttagaaa 556  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  29601231 caaatatccttcggcagttaactgctgaagttttagaaa 29601193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 30497085 - 30497003
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| | |  | || || |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  30497085 aattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 30497003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 33222594 - 33222660
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| | | ||||||||||||| ||||| ||||| | |  |||||||||||||||||    
T  33222594 taaattactcaaatgctcctcggcagttaactaccgaaattttaaagaaccggctgcagttaactgc 33222660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 38945728 - 38945806
Alignment:
Q  498 tgccacacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | ||| |||| |||||||||  |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  38945728 tgccacacgagtaatttacgcaaataccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 38945806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 547
Target Start/End: Complemental strand, 39951285 - 39951207
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag 547  Q
    ||||| ||||||||| |||| |||| || || ||||| | |||||||||||||| | | ||||||||||||||| ||||    
T  39951285 aattgctgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatgctcctcggcagttaactgcagaag 39951207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 3940836 - 3940783
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  3940836 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 3940783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 546
Target Start/End: Complemental strand, 4286796 - 4286759
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  4286796 taaattactcaaatacccctcgacagttaactgccgaa 4286759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 28468578 - 28468659
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttt 550  Q
    ||||||||||||||| | |  |||| || |||||||| | |||| ||| |||||||||||||  ||| ||||||||||||||    
T  28468578 aattgttgttcccacgtatagtttggctgtgccacacgagtaaaatacgcaaatacccttcgatagtaaactgccgaagttt 28468659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 36652903 - 36652948
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||| ||||||||||||||  ||| |||||||||||    
T  36652903 tcggcagttaactgtcgaagttttagaaaaccggatgcagttaact 36652948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 574
Target Start/End: Original strand, 40156377 - 40156442
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||| ||| ||| ||||||| ||||||| ||||  |||  ||||||||||||||||    
T  40156377 taaattactcaaatgcccctcgacagttaattgccgaaattttgaaaaaccggctgcagttaactg 40156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 43978502 - 43978555
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  43978502 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 43978555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 575
Target Start/End: Complemental strand, 24607641 - 24607597
Alignment:
Q  531 gcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||    
T  24607641 gcagttaactgccgaagatttaaaaaaccggctgcagttaactgc 24607597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 573
Target Start/End: Complemental strand, 29407982 - 29407918
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    ||||||||||||||  || |||||||||||||| |||| ||||| | |  |||||||||||||||    
T  29407982 taaattactcaaatgtccctcggcagttaactgtcgaaattttaaagaaccggctgcagttaact 29407918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 546
Target Start/End: Original strand, 35935188 - 35935232
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||    
T  35935188 acacaagtaatttacccaaatgcccttcggcagttaactgccgaa 35935232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 551
Target Start/End: Original strand, 39793950 - 39793982
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagtttt 551  Q
    |||| ||||||||||||||||||||||||||||    
T  39793950 aaatgcccttcggcagttaactgccgaagtttt 39793982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 39800738 - 39800706
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagtttt 551  Q
    |||| ||||||||||||||||||||||||||||    
T  39800738 aaatgcccttcggcagttaactgccgaagtttt 39800706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 573
Target Start/End: Original strand, 40220617 - 40220681
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||| ||||||| | ||||||||||||||||||| | | | |||  |||||||||||||||    
T  40220617 taaattacccaaatactcctcggcagttaactgccgaattctgaaaaaatcggctgcagttaact 40220681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 3891421 - 3891527
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||  |||| || |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3891421 aattgctgttcccacttttactttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagt 3891520  T
Q  569 taactgc 575  Q
    |||||||    
T  3891521 taactgc 3891527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 8539618 - 8539545
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  8539618 acacaagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 8539545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 470 - 571
Target Start/End: Original strand, 5715 - 5816
Alignment:
Q  470 attgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagtt 569  Q
    |||||||||||||| |||| |||  || |||||||| | |||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  5715 attgttgttcccacatttggtttagctgtgccacacgagtaaattactcaaacgcccctcggcagttaactgccgaagttttagaaatacgactgcagtt 5814  T
Q  570 aa 571  Q
    ||    
T  5815 aa 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 14769 - 14692
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14769 tgccacacgagtaaattactcaaatgtccttcggcagttaactgccgaagttttagaaatacggctgtagttaactgc 14692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 11348570 - 11348504
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||   | |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  11348570 taaattactcaaatgttcctcggcagttaactgccgaagttttagaaatccggatgcagttaactgc 11348504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 27659877 - 27659959
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||| ||||||||| |||| |||| || |||||||| | |||||||||||||| |||||||| ||| |||||||||||||||    
T  27659877 aattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttt 27659959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 3892572 - 3892495
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||| ||||  |||||||||| | ||||||||||||||  || |||||||||||||||||||    
T  3892572 aattgttgttcccacatttggtttggttatgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaa 3892495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 509 - 574
Target Start/End: Original strand, 30192470 - 30192535
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| | |  ||||||||||||||||    
T  30192470 taaattactcaaatgcccttcggcagttaactgccgaaattttaaagaaccggctgcagttaactg 30192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 7757326 - 7757369
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  7757326 cagttaactgccgaagttttagaaatccggctgcagttaactgc 7757369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 575
Target Start/End: Complemental strand, 43094648 - 43094605
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  43094648 cagttaactgccgaagttttagaaatccggctgcagttaactgc 43094605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 528 - 574
Target Start/End: Complemental strand, 7762320 - 7762274
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  7762320 tcggcagttaactgccgaagttttagaaattcggttgcagttaactg 7762274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 8574620 - 8574701
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| |||| |||| || ||| |||| | |||||||||||||| |||||||| ||| |||||||||||||||    
T  8574620 aattgttgttcccacatttggtttggctgtgc-acacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttt 8574701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 575
Target Start/End: Complemental strand, 30711274 - 30711188
Alignment:
Q  490 tttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||||||||||| |||||||| ||||| | | |||||||||||||||||||| |||||| ||  |||| ||||||||||||    
T  30711274 tttggctatgccacacaagtaaattacgcaaatgctcctcggcagttaactgccgaagtttttaggaagtcggcggcagttaactgc 30711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 11346008 - 11346051
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  11346008 cagttaactgccgaagttttagaaatccagctgcagttaactgc 11346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 43094009 - 43094052
Alignment:
Q  532 cagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  43094009 cagttaactgccgaaattttagaaatccggctgcagttaactgc 43094052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 13563645 - 13563711
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| ||||||||| ||||||||||||||||||||  |  | ||| |||||||||||||||||    
T  13563645 taaattacccaaatacccctcggcagttaactgccgaagaatatgtaatccggctgcagttaactgc 13563711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 41623139 - 41623077
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||||||||||||||||||||||||||||| ||||| | |  |||||||||| ||||||    
T  41623139 ttacccaaatacccttcggcagttaactgccgaaattttaaagaaccggctgcagtaaactgc 41623077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 20744078 - 20744022
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| ||| ||||||||||||||||||||||||| | |  |||||||||||||||||    
T  20744078 aaatgcccctcggcagttaactgccgaagttttaaagaatcggctgcagttaactgc 20744022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 28241885 - 28241853
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||||||||||||||||||||||||||    
T  28241885 aaatacccttcggcagttaactgccgaagtttt 28241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 552
Target Start/End: Original strand, 11027032 - 11027115
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttta 552  Q
    ||||||||||||||| | |  | || || |||||||| | |||| |||  |||| |||||||||||||||||||||||||||||    
T  11027032 aattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttta 11027115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 13837661 - 13837768
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcag 567  Q
    ||||| ||||||||| |||| |||| || |||||||| | ||  ||||  |||| |||||||||||| ||||||||||| |||||| ||  |||| ||||    
T  13837661 aattgctgttcccacatttgctttggctgtgccacacgagtactttacaaaaatgcccttcggcagtaaactgccgaagtttttagtaaaccggcggcag 13837760  T
Q  568 ttaactgc 575  Q
    ||||||||    
T  13837761 ttaactgc 13837768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 34122517 - 34122568
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||| |  || ||||| |||||||||||||||||    
T  34122517 cccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 34122568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 8577023 - 8576973
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  8577023 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 8576973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 8580586 - 8580508
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaag-ttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | |||||||||||||| |||||||| ||||  ||||||||| |||||| ||  |||| ||||||||||||    
T  8580586 tgccacacgagtaaattactcaaatgcccttcggtagtttgctgccgaagtttttaggaaatcggcggcagttaactgc 8580508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 18512209 - 18512275
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||| |||||| | | |||||||||||||||||||||||   |||  |||||||||||||||||    
T  18512209 taaattattcaaatgctcatcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgc 18512275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 18512746 - 18512681
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||| |||| | |||||||||||||||||||||||||   |||  |||||||||||||||||    
T  18512746 taaattact-aaatgctcttcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgc 18512681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 30708897 - 30708947
Alignment:
Q  526 cttcggcagttaactgccgaagtttt-agaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  30708897 cttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgc 30708947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 551
Target Start/End: Complemental strand, 35672100 - 35672058
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||  || ||||||||||||||||||||||||    
T  35672100 taaattactcaaatgtccctcggcagttaactgccgaagtttt 35672058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 38408552 - 38408498
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| |||||||||| ||||||||||||||||||||||  || | ||||||||||    
T  38408552 aaatgcccttcggcaattaactgccgaagttttagaaaaccgacggcagttaact 38408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Complemental strand, 5200432 - 5200387
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||| ||||||||| ||||||||||||||  |||||||||||||||    
T  5200432 tcggtagttaactgtcgaagttttagaaaatcggctgcagttaact 5200387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 546
Target Start/End: Complemental strand, 13838519 - 13838482
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  13838519 taaattacccaaatacccctcggcagttaactgccgaa 13838482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 38853445 - 38853498
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  38853445 tgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagtttt 38853498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 542
Target Start/End: Complemental strand, 34080174 - 34080134
Alignment:
Q  502 acacaaataaattactcaaatacccttcggcagttaactgc 542  Q
    |||||| |||||||| ||||||||| |||||||||||||||    
T  34080174 acacaagtaaattacccaaatacccctcggcagttaactgc 34080134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 469 - 574
Target Start/End: Complemental strand, 69356 - 69251
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  69356 aattgatgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggatgcagt 69257  T
Q  569 taactg 574  Q
    ||||||    
T  69256 taactg 69251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 42583195 - 42583089
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    |||||||||||||||||||| ||||  | |||||||| | |||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||    
T  42583195 aattgttgttcccacttttggtttggatgtgccacacgagtaaattactcaaatacctctcggcagttaactgtagaagttttagaaatacggctgcagt 42583096  T
Q  569 taactgc 575  Q
    |||||||    
T  42583095 taactgc 42583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 12210725 - 12210619
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| |||| || ||||| || | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  12210725 aattgctgttcccacatttggtttggctgtgccatacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggccgcagt 12210626  T
Q  569 taactgc 575  Q
    |||||||    
T  12210625 taactgc 12210619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 45258139 - 45258033
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||| ||| ||||||||| || |||||||| | |||||||||||||| ||| |||||||||||||||  || |||||||||||||||||||||    
T  45258139 aattgttgttctcacatttgatttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgcataaattttagaaatacggctgcagt 45258040  T
Q  569 taactgc 575  Q
    |||||||    
T  45258039 taactgc 45258033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 46908608 - 46908502
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| |||||||||||||| |||| || |||||||| | ||||||| | |||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  46908608 aattgctgttcccacttttggtttggctgtgccacacgagtaaattatttaaatacctctcggcagttaactgtcgaagttttagaaatacggctgcagt 46908509  T
Q  569 taactgc 575  Q
    |||||||    
T  46908508 taactgc 46908502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 7007 - 7113
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| | |  |||| || |||||||| | |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  7007 aattgctgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagt 7106  T
Q  569 taactgc 575  Q
    |||||||    
T  7107 taactgc 7113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 8182 - 8076
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| | |  |||| || |||||||||| |||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||    
T  8182 aattgctgttcccacatgttgtttggctgtgccacacaagtaaattactcaaatgcccctcggcagttaactacagaagttttagaaatacggctgcagt 8083  T
Q  569 taactgc 575  Q
    |||||||    
T  8082 taactgc 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 27656976 - 27657082
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||| ||||||||| |||| ||||  | |||||||| | ||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  27656976 aattgctgttcccacatttggtttggttgtgccacacgagtaaattattcaaatgcccctcggcagttaactgccaaagttttagaaatacggctgcagt 27657075  T
Q  569 taactgc 575  Q
    |||||||    
T  27657076 taactgc 27657082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 469 - 575
Target Start/End: Complemental strand, 13921399 - 13921293
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| ||||  | |||||||| | |||||||||||||| | | |||||||||||||||||||||||||||||| | || |||||    
T  13921399 aattgttgttcccacatttggtttggttgtgccacacgagtaaattactcaaatgctcctcggcagttaactgccgaagttttagaaatccagcggcagt 13921300  T
Q  569 taactgc 575  Q
    |||||||    
T  13921299 taactgc 13921293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 477 - 575
Target Start/End: Complemental strand, 17841017 - 17840919
Alignment:
Q  477 ttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||| ||||||||| || |||||||| | ||||||||||||||   | |||||||||||||||||||||||||||||| || ||||||||||||||    
T  17841017 ttcccacgtttgatttggctgtgccacacgagtaaattactcaaatgttcatcggcagttaactgccgaagttttagaaatccgactgcagttaactgc 17840919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 46907477 - 46907554
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||| | |||||||||||||| |||||||||||||||||||||||    
T  46907477 aattgctgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaa 46907554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 469 - 545
Target Start/End: Complemental strand, 42795215 - 42795139
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||||||||| |||| || |||||||| | ||||||||||||||| || ||||||||||||||||||    
T  42795215 aattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatatccctcggcagttaactgccga 42795139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 556
Target Start/End: Complemental strand, 10524492 - 10524405
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaa 556  Q
    ||||||||||||||| |||| |||| || || ||||| | |||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  10524492 aattgttgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatgcccctcggcagttaactgtcgaagttttagaaa 10524405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 542
Target Start/End: Complemental strand, 49141753 - 49141680
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgc 542  Q
    ||||||||||||||| |||| |||| ||||||||||| | |||||||||||||| ||| |||||||||||||||    
T  49141753 aattgttgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagttaactgc 49141680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 46738799 - 46738846
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  46738799 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 46738846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 546
Target Start/End: Original strand, 49140593 - 49140671
Alignment:
Q  468 caattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||| ||||||||| |||| ||||  ||||| |||| | |||||||||||||||||| |||||||||||||||||||    
T  49140593 caattgatgttcccacatttggtttggttatgctacacgagtaaattactcaaatacccctcggcagttaactgccgaa 49140671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 42582053 - 42582130
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||| ||||||||| |||| |||| ||||||||||| | ||||||||||||||  || |||||||||||||||||||    
T  42582053 aattgctgttcccacatttggtttggctatgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaa 42582130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 42794134 - 42794211
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||| |||| || ||||||||||||| | |||||||||||||| | | ||||||| |||||||||||    
T  42794134 aattgttgttcccacatttggttggactatgccacacgagtaaattactcaaatgctcctcggcagataactgccgaa 42794211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 573
Target Start/End: Original strand, 17838645 - 17838692
Alignment:
Q  526 cttcggcagttaactgccgaagttttagaaatacggctgcagttaact 573  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  17838645 cttcggcagttaactgccgaagttttagaaatccggctgcagtaaact 17838692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 18109910 - 18109828
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| |||| |||| || ||| |||| | ||||||| |||||| |||||||||||| ||||| |||||||||    
T  18109910 aattgttgttcccacatttggtttggctgtgctacacgagtaaattattcaaatgcccttcggcagtaaactgtcgaagtttt 18109828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 30846890 - 30846824
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| | |  |||||||||||||||||    
T  30846890 taaattactcaaatacccctcgacagttaactgccgaaattttaaagaaccggctgcagttaactgc 30846824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 559
Target Start/End: Original strand, 38083745 - 38083835
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatac 559  Q
    |||||||||| |||| |||| |||| || || ||||| | || ||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  38083745 aattgttgtttccacatttggtttggctgtgtcacacgagtacattactcaaatgcccctcggcagttaactgctgaagttttggaaatac 38083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 477 - 551
Target Start/End: Complemental strand, 40929055 - 40928981
Alignment:
Q  477 ttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||| |||||||||  | |||||||| ||||| |||||||||| || ||||||||| |||||||||||||||    
T  40929055 ttcccacatttgatttggttgtgccacacgaataatttactcaaatgcctttcggcagtaaactgccgaagtttt 40928981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 17834475 - 17834531
Alignment:
Q  519 aaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||| |||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  17834475 aaatgcccttcggcagttaactgccgaagttttagtaaaccggcggcagttaactgc 17834531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 38555504 - 38555442
Alignment:
Q  513 ttactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||| |||||||||||||||||||||| ||||| | |  | |||||||||||||||    
T  38555504 ttactcaaatatccttcggcagttaactgccgaaattttaaagaaccagctgcagttaactgc 38555442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 546
Target Start/End: Complemental strand, 47751279 - 47751242
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  47751279 taaattactcaaatacccttcggcacttaactgccgaa 47751242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 34139890 - 34139941
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | |||||||||||||  |||||||| |||||||||||||||||    
T  34139890 cccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgc 34139941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 618832 - 618754
Alignment:
Q  498 tgccacacaaataaattactcaaata-cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | ||| |||| |||||| ||| |||||||||||||||||| |  || ||||| |||||||||||||||||    
T  618832 tgccacacgagtaatttacgcaaatatcccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 618754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 14101426 - 14101492
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| | |  ||||||||| |||||||    
T  14101426 taaattactcaaatgccccttggcagttaactgccgaaattttaaagaaccggctgcagctaactgc 14101492  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 14102443 - 14102377
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| ||| ||||||||||||||| ||||| | |  |||||||| ||||||||    
T  14102443 taaattactcaaatgcccctcgacagttaactgccgaaattttaaagaatcggctgcaattaactgc 14102377  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 14411443 - 14411509
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| | |  ||||||||| |||||||    
T  14411443 taaattactcaaatgccccttggcagttaactgccgaaattttaaagaaccggctgcagctaactgc 14411509  T

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Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 14412460 - 14412394
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||| ||| ||| ||||||||||||||| ||||| | |  |||||||| ||||||||    
T  14412460 taaattactcaaatgcccctcgacagttaactgccgaaattttaaagaatcggctgcaattaactgc 14412394  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 546
Target Start/End: Original strand, 7974917 - 7974954
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccgaa 546  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  7974917 taaattacccaaatacccctcggcagttaactgccgaa 7974954  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 9371494 - 9371441
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||| |||| |||  |||| ||||| ||||||||||||||||||||||    
T  9371494 tgccacacaagtaaaataccaaaatgccctttggcagttaactgccgaagtttt 9371441  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 571
Target Start/End: Original strand, 13644360 - 13644461
Alignment:
Q  470 attgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagtt 569  Q
    |||||||||| ||| ||||||||| ||  |  |||| | ||| |||| |||||| ||| |||||||||||||||||| ||||| | |  |||||||||||    
T  13644360 attgttgttcacacatttgatttggctgagaaacacgagtaatttacccaaatatcctacggcagttaactgccgaaattttaaagaaccggctgcagtt 13644459  T
Q  570 aa 571  Q
    ||    
T  13644460 aa 13644461  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 551
Target Start/End: Complemental strand, 40141361 - 40141280
Alignment:
Q  470 attgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||||||||| | |  |||| || |||||||| | |||||||||||||| |||||||| ||||   ||||||||||||    
T  40141361 attgttgttcccacatatagtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtttgttgccgaagtttt 40141280  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 48403338 - 48403391
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    |||||||| | |||| |||  |||| ||||||||||||||||||||||||||||    
T  48403338 tgccacaccagtaaaatacaaaaatgcccttcggcagttaactgccgaagtttt 48403391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 545
Target Start/End: Complemental strand, 34139764 - 34139728
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  34139764 taaattactcaaatgcccctcggcagttaactgccga 34139728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 556
Target Start/End: Original strand, 47521414 - 47521442
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaa 556  Q
    |||||||||||||||||||||||||||||    
T  47521414 tcggcagttaactgccgaagttttagaaa 47521442  T

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Target: scaffold0494 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 11589 - 11507
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||||||| |||| |||| || |||||||| | ||||||||  |||| ||||||||||||||||||||||||||||    
T  11589 aattgttgttcccacatttggtttggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttt 11507  T

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Target: scaffold0199 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 10590 - 10696
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagt 568  Q
    ||||||||||||||| |||| ||||  | || ||||| | ||||||||| |||| |||||||||| ||||||||||||||||||| ||  |||| |||||    
T  10590 aattgttgttcccacatttggtttggttgtgtcacacgagtaaattacttaaatgcccttcggcaattaactgccgaagttttagtaaaccggcggcagt 10689  T
Q  569 taactgc 575  Q
    |||||||    
T  10690 taactgc 10696  T

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Target: scaffold0199; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 12466 - 12417
Alignment:
Q  526 cttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12466 cttcggcagttaactgccgaagttttagaaatccggctgcagttaactgc 12417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 18373 - 18323
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    ||||||||| |||||||||||||||||||||||| || |||||||| ||||    
T  18373 cccttcggcggttaactgccgaagttttagaaatccgactgcagtttactg 18323  T

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Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 524 - 574
Target Start/End: Original strand, 54471 - 54521
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactg 574  Q
    ||||||||| |||||||||||||||||||||||| || |||||||| ||||    
T  54471 cccttcggcggttaactgccgaagttttagaaatccgactgcagtttactg 54521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 41163 - 41111
Alignment:
Q  498 tgccacacaaataaattactcaaatacccttcggcagttaactgccgaagttt 550  Q
    |||||||| | |||| |||| |||||||||||||||||||||| |||||||||    
T  41163 tgccacacgagtaaaatactaaaatacccttcggcagttaactaccgaagttt 41111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 15489 - 15442
Alignment:
Q  528 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||| ||||| |||||||| |||| ||||||||||||    
T  15489 tcggcagttaactgctgaagtattagaaatccggcggcagttaactgc 15442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 815 - 866
Alignment:
Q  524 cccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | |||||||||||||  |||||||| |||||||||||||||||    
T  815 cccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgc 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 545
Target Start/End: Complemental strand, 689 - 653
Alignment:
Q  509 taaattactcaaatacccttcggcagttaactgccga 545  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  689 taaattactcaaatgcccctcggcagttaactgccga 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 11746 - 11824
Alignment:
Q  498 tgccacacaaataaattactcaaataccct-tcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||| | ||| |||| |||||||||| ||||||||||||| |||| |  || ||||| |||||||||||||||||    
T  11746 tgccacaccagtaatttacgcaaataccctctcggcagttaactaccgaggaatttgaaatccggctgcagttaactgc 11824  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 15701 - 15651
Alignment:
Q  525 ccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||||||||||||||| ||||||||||| ||  |||| ||||||||||||    
T  15701 ccttcggcagttaactgtcgaagttttagtaaaccggcggcagttaactgc 15651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 49984 - 50066
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaatacccttcggcagttaactgccgaagtttt 551  Q
    ||||||||||  ||| |||| |||| || |||||||| | |||||||||||||| | | ||| ||||||| ||||||||||||    
T  49984 aattgttgtttacacatttggtttggctgtgccacacgagtaaattactcaaatgctcctcgacagttaaatgccgaagtttt 50066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 293 - 240
Alignment:
Q  469 aattgttgttcccacttttgatttgactatgccacacaaataaattactcaaat 522  Q
    ||||||||||||||| |||| |||| || |||||||||| |||||||| |||||    
T  293 aattgttgttcccacatttggtttggctgtgccacacaagtaaattacgcaaat 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 575
Target Start/End: Original strand, 8171 - 8243
Alignment:
Q  503 cacaaataaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    ||||| |||||||| ||||||| | |||||||||||||||| | |  || ||||| ||| |||||||||||||    
T  8171 cacaagtaaattacccaaatactcctcggcagttaactgccaaggaatttgaaatccggatgcagttaactgc 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 1690 - 1642
Alignment:
Q  527 ttcggcagttaactgccgaagttttagaaatacggctgcagttaactgc 575  Q
    |||||||||||||||  |||||||||||||  ||| |||||||||||||    
T  1690 ttcggcagttaactgttgaagttttagaaaatcggttgcagttaactgc 1642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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