View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9000_high_31 (Length: 209)
Name: NF9000_high_31
Description: NF9000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9000_high_31 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 36577901 - 36578109
Alignment:
| Q |
1 |
tgtgtgtggaagattttgaatgtcaagttgaagagtgtgtcaaaagttgtatttcacgcttatgcttatattcttacattttagatttggtgcgacacat |
100 |
Q |
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| T |
36577901 |
tgtgtgtggaagattttggatgtcaagttgaagagtgtgtcaaaagttgtatttcacgcttatgcttatattcttacattttagatttggtgcaacacat |
36578000 |
T |
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| Q |
101 |
tcttataaccaatttgtatagtgaaatagtatttttctctataaacnnnnnnngaggataagatattcacgctgaacactgttggattaagtaaaagcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36578001 |
tcttataaccaatttgtatagtgaaatagtatttttctctataaactttttttgaggataagatattcacgctgaacactgttggattaagtaaaagcta |
36578100 |
T |
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| Q |
201 |
aataaagcc |
209 |
Q |
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| T |
36578101 |
aataaagcc |
36578109 |
T |
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