View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9000_low_17 (Length: 568)

Name: NF9000_low_17
Description: NF9000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9000_low_17
NF9000_low_17
[»] chr4 (5 HSPs)
chr4 (1-375)||(8324236-8324614)
chr4 (392-550)||(8324091-8324249)
chr4 (236-266)||(43902318-43902348)
chr4 (237-273)||(5841455-5841491)
chr4 (241-273)||(56250328-56250360)
[»] chr6 (4 HSPs)
chr6 (51-209)||(10728059-10728226)
chr6 (236-273)||(1063623-1063660)
chr6 (236-273)||(4582001-4582038)
chr6 (231-268)||(16464446-16464483)
[»] chr5 (2 HSPs)
chr5 (236-273)||(4441078-4441115)
chr5 (236-273)||(11796186-11796223)
[»] chr1 (9 HSPs)
chr1 (236-273)||(7351693-7351730)
chr1 (236-273)||(32970591-32970628)
chr1 (236-275)||(31154183-31154222)
chr1 (239-281)||(9379281-9379323)
chr1 (236-274)||(27687297-27687335)
chr1 (236-273)||(6160483-6160520)
chr1 (236-281)||(8896356-8896401)
chr1 (237-270)||(28092572-28092605)
chr1 (236-273)||(44761555-44761592)
[»] chr8 (5 HSPs)
chr8 (236-273)||(36006909-36006946)
chr8 (236-272)||(5356657-5356693)
chr8 (236-273)||(4428373-4428410)
chr8 (237-273)||(13831618-13831654)
chr8 (237-273)||(15810005-15810041)
[»] chr7 (4 HSPs)
chr7 (236-273)||(2850909-2850946)
chr7 (237-270)||(30107183-30107216)
chr7 (236-273)||(39452408-39452445)
chr7 (237-273)||(39308650-39308686)
[»] chr3 (5 HSPs)
chr3 (236-273)||(30711130-30711167)
chr3 (236-273)||(24569121-24569158)
chr3 (236-273)||(51837980-51838017)
chr3 (236-273)||(54477480-54477517)
chr3 (233-281)||(38512074-38512122)
[»] chr2 (6 HSPs)
chr2 (242-273)||(19444203-19444234)
chr2 (236-275)||(43730485-43730524)
chr2 (236-273)||(15359106-15359143)
chr2 (236-273)||(39691547-39691584)
chr2 (236-273)||(43730670-43730707)
chr2 (233-273)||(36173358-36173398)
[»] scaffold0302 (1 HSPs)
scaffold0302 (236-273)||(16155-16192)


Alignment Details
Target: chr4 (Bit Score: 326; Significance: 0; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 8324614 - 8324236
Alignment:
Q  1 tggatagacatctattcatgcattgcaatgtgtggttgagggtgctatattggttccaaggggagatgataatgcaccaaatttgttcaacctttggaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||    
T  8324614 tggatagacatctattcatgcattgcaatgtgtggttgagggtgctatattggttacaaggggagatgataatgcgccaaatttgttcaacctttgtaag 8324515  T
Q  101 t----gttggaatagtatgtcgaggagtaaaaaggaaacaaaggggatgagactcatttgacattcaacgatttgggtcatatggaaagctagaaacaat 196  Q
    |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8324514 taagtgttggaatagtatgtcgaggagtaaaaaggaaacaaaggggatgagactcatttgacattcaacgatttgggtcatatggaaagttagaaacaat 8324415  T
Q  197 tgtattttcaacatctattcaagccttcggtatcacttttgttgattttaatgataaaattaatattatttactaaattatattttccgagctacactta 296  Q
    || |||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8324414 tgcattttcaacatctattcaagtctttggtatcgcttttgttgattttaatgataaaattaatattatttactaaattatattttccgagttacactta 8324315  T
Q  297 ttttgaataggaacttgatttattaaagagtgttttgagaataatgacatttaataaaatgaagatagttagattttac 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8324314 ttttgaataggaacttgatttattaaagagtgttttgagaataatgacatttaataaaatgaagatagttagattttac 8324236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 392 - 550
Target Start/End: Complemental strand, 8324249 - 8324091
Alignment:
Q  392 tagttagattttacttatattttttaccactaactatgagttctttttggtttatattttgaggggaaaatgatcattttcttatttgtttgcaatttac 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8324249 tagttagattttacttatattttttaccactaactatgagttctttttggtttatattttgaggggaaaatgatcattttcttatttgttggcaatttac 8324150  T
Q  492 ttgaagcgtttcttatctgatgcaaaattggtttataactggtgttttttgtttgtggt 550  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8324149 ttgaagcgtttcttatctgatgcaaaattggtttataactgatgttttttgtttgtggt 8324091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 266
Target Start/End: Complemental strand, 43902348 - 43902318
Alignment:
Q  236 tgttgattttaatgataaaattaatattatt 266  Q
    |||||||||||||||||||||||||||||||    
T  43902348 tgttgattttaatgataaaattaatattatt 43902318  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 5841455 - 5841491
Alignment:
Q  237 gttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  5841455 gttgattttaatggtaaaattaatatcatttactaaa 5841491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 56250328 - 56250360
Alignment:
Q  241 attttaatgataaaattaatattatttactaaa 273  Q
    ||||| |||||||||||||||||||||||||||    
T  56250328 attttgatgataaaattaatattatttactaaa 56250360  T

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Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 10728226 - 10728059
Alignment:
Q  51 tggttccaaggggagatgataatgca-ccaaatttgttcaacctttggaagtgttggaa--------tagtatgtcgaggagtaaaaaggaaacaaaggg 141  Q
    ||||| |||||||||||||||||||  ||||||||||| |||| |||| | ||||||||        ||||||||||||||  |||||||||||||||||    
T  10728226 tggttacaaggggagatgataatgctgccaaatttgtttaaccattgggaatgttggaaacatggaatagtatgtcgaggaacaaaaaggaaacaaaggg 10728127  T
Q  142 gatgagactcatttgacattcaacgatttgggtcatatggaaagctagaaacaattgtattttcaaca 209  Q
    |||||| |||||||  |||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  10728126 gatgagtctcatttagcattcaacgatttgggtcttatggaaagctagaaacaatttcattttcaaca 10728059  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 1063623 - 1063660
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  1063623 tgttgatttcaatgataaaattagtattatttactaaa 1063660  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 4582001 - 4582038
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  4582001 tgttgattttaatggtaaaattaatatcatttactaaa 4582038  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 16464483 - 16464446
Alignment:
Q  231 acttttgttgattttaatgataaaattaatattattta 268  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  16464483 actttggttgattttaatggtaaaattaatattattta 16464446  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 4441115 - 4441078
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4441115 tgttgattttaatgataaaattaatattatttactaaa 4441078  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 11796186 - 11796223
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11796186 tgttgattttaatgataaaattaatattatttactaaa 11796223  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 7351730 - 7351693
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7351730 tgttgattttaatgataaaattaatattatttactaaa 7351693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 32970591 - 32970628
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32970591 tgttgatttcaatgataaaattaatattatttactaaa 32970628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 31154222 - 31154183
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaatt 275  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  31154222 tgttgattttaatgataaaattagtattatctactaaatt 31154183  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 9379323 - 9379281
Alignment:
Q  239 tgattttaatgataaaattaatattatttactaaattatattt 281  Q
    |||||||||||||||||||||||| ||||| |||| |||||||    
T  9379323 tgattttaatgataaaattaatatcatttattaaaatatattt 9379281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 27687335 - 27687297
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaat 274  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  27687335 tgttgatttcaatggtaaaattaatattatttactaaat 27687297  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 6160483 - 6160520
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  6160483 tgttgatttcaatgataaaattagtattatttactaaa 6160520  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 8896356 - 8896401
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaattatattt 281  Q
    ||||||||| |||| |||||||||||| |||||||||| |||||||    
T  8896356 tgttgatttcaatggtaaaattaatatcatttactaaaatatattt 8896401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 28092605 - 28092572
Alignment:
Q  237 gttgattttaatgataaaattaatattatttact 270  Q
    ||||||||||||| ||||||||||||||||||||    
T  28092605 gttgattttaatggtaaaattaatattatttact 28092572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 44761555 - 44761592
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  44761555 tgttaattttaatgataaaattaatatcatttactaaa 44761592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 36006909 - 36006946
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  36006909 tgttgattttaatgataaaattaatattattgactaaa 36006946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 5356693 - 5356657
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaa 272  Q
    ||||||||||||||||||||||||||| |||||||||    
T  5356693 tgttgattttaatgataaaattaatatcatttactaa 5356657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 4428373 - 4428410
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  4428373 tgttgattttaatgataaaattattatcatttactaaa 4428410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 13831618 - 13831654
Alignment:
Q  237 gttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  13831618 gttgattttaatggtaaaattaatattatttattaaa 13831654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 15810005 - 15810041
Alignment:
Q  237 gttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||| || ||||||||||||||||||||    
T  15810005 gttgattttaatggtagaattaatattatttactaaa 15810041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000008; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 2850909 - 2850946
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2850909 tgttgatttcaatgataaaattaatattatttactaaa 2850946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 30107216 - 30107183
Alignment:
Q  237 gttgattttaatgataaaattaatattatttact 270  Q
    ||||||||||||| ||||||||||||||||||||    
T  30107216 gttgattttaatggtaaaattaatattatttact 30107183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 39452445 - 39452408
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  39452445 tgttgattttaatggtaaaattaatatcatttactaaa 39452408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 39308686 - 39308650
Alignment:
Q  237 gttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||  |||||||||||||||||||||||    
T  39308686 gttgattttaatagtaaaattaatattatttactaaa 39308650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 30711167 - 30711130
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  30711167 tgttgattttaatgataaaattaatatcatttactaaa 30711130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 24569121 - 24569158
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  24569121 tgttgatttcaatggtaaaattaatattatttactaaa 24569158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 51837980 - 51838017
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  51837980 tgttgatttcaatgataaaattaatatcatttactaaa 51838017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 54477480 - 54477517
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  54477480 tgttgattttaatggtaaaattaatatcatttactaaa 54477517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 38512122 - 38512074
Alignment:
Q  233 ttttgttgattttaatgataaaattaatattatttactaaattatattt 281  Q
    |||| |||||||||||||||||||| |||| ||||| |||| |||||||    
T  38512122 ttttattgattttaatgataaaattgatatcatttattaaaatatattt 38512074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 273
Target Start/End: Complemental strand, 19444234 - 19444203
Alignment:
Q  242 ttttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||||||||    
T  19444234 ttttaatgataaaattaatattatttactaaa 19444203  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 43730524 - 43730485
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaatt 275  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  43730524 tgttgattttaatggtaaaattaatatcatttactaaatt 43730485  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 15359106 - 15359143
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  15359106 tgttgattttgatgataaaattaatatcatttactaaa 15359143  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 39691584 - 39691547
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  39691584 tgttgatttcaatgataaaattaatatcatttactaaa 39691547  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 43730707 - 43730670
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  43730707 tgttgattttaatggtaaaattaatatcatttactaaa 43730670  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 36173358 - 36173398
Alignment:
Q  233 ttttgttgattttaatgataaaattaatattatttactaaa 273  Q
    |||||||||||||| ||||||||||||||| ||||| ||||    
T  36173358 ttttgttgattttagtgataaaattaatatcatttattaaa 36173398  T

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Target: scaffold0302 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 16192 - 16155
Alignment:
Q  236 tgttgattttaatgataaaattaatattatttactaaa 273  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  16192 tgttgattttaatgataaaattaatagcatttactaaa 16155  T

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