View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9000_low_23 (Length: 461)

Name: NF9000_low_23
Description: NF9000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9000_low_23
NF9000_low_23
[»] scaffold0505 (1 HSPs)
scaffold0505 (205-446)||(4396-4637)
[»] chr1 (39 HSPs)
chr1 (237-361)||(25262357-25262481)
chr1 (68-205)||(16759508-16759645)
chr1 (68-192)||(25262233-25262360)
chr1 (15-211)||(21857035-21857231)
chr1 (68-199)||(41049172-41049302)
chr1 (68-211)||(35260280-35260423)
chr1 (15-195)||(22921016-22921196)
chr1 (68-211)||(52927252-52927395)
chr1 (68-211)||(35980889-35981032)
chr1 (19-145)||(40390169-40390295)
chr1 (68-173)||(21473742-21473846)
chr1 (15-179)||(49261932-49262096)
chr1 (68-206)||(50613239-50613376)
chr1 (68-206)||(50621067-50621204)
chr1 (19-145)||(13212143-13212269)
chr1 (111-205)||(26065755-26065848)
chr1 (47-174)||(29777468-29777595)
chr1 (68-199)||(33681798-33681929)
chr1 (68-179)||(28193655-28193766)
chr1 (68-134)||(26065847-26065913)
chr1 (68-199)||(14294728-14294858)
chr1 (68-199)||(21342913-21343043)
chr1 (68-199)||(21347778-21347908)
chr1 (68-199)||(27652392-27652521)
chr1 (68-199)||(51131378-51131508)
chr1 (126-197)||(12272413-12272483)
chr1 (71-199)||(16093024-16093151)
chr1 (15-103)||(15859264-15859352)
chr1 (15-103)||(20249161-20249250)
chr1 (15-95)||(20453583-20453663)
chr1 (68-199)||(50687433-50687562)
chr1 (15-103)||(433890-433979)
chr1 (68-195)||(16381960-16382087)
chr1 (51-103)||(34510664-34510717)
chr1 (47-95)||(13989787-13989835)
chr1 (47-95)||(21474277-21474325)
chr1 (15-95)||(21708174-21708254)
chr1 (15-95)||(21712717-21712797)
chr1 (47-95)||(21922482-21922530)
[»] scaffold0357 (3 HSPs)
scaffold0357 (68-211)||(15328-15471)
scaffold0357 (51-211)||(13981-14141)
scaffold0357 (68-199)||(4787-4917)
[»] chr6 (36 HSPs)
chr6 (56-205)||(9097639-9097788)
chr6 (51-211)||(25645070-25645230)
chr6 (68-211)||(27332510-27332653)
chr6 (68-211)||(27393250-27393393)
chr6 (51-211)||(19669231-19669389)
chr6 (51-174)||(19302727-19302850)
chr6 (68-179)||(23665054-23665165)
chr6 (101-193)||(23022170-23022262)
chr6 (68-174)||(18409029-18409135)
chr6 (68-199)||(19024217-19024347)
chr6 (128-207)||(5833717-5833795)
chr6 (128-207)||(22158006-22158084)
chr6 (68-199)||(23539759-23539882)
chr6 (128-207)||(20177907-20177985)
chr6 (15-96)||(20555981-20556062)
chr6 (15-95)||(17882657-17882737)
chr6 (47-95)||(18343112-18343160)
chr6 (15-95)||(19003502-19003582)
chr6 (15-86)||(18457615-18457686)
chr6 (15-86)||(18820979-18821050)
chr6 (15-86)||(27572069-27572140)
chr6 (15-86)||(29808027-29808098)
chr6 (16-95)||(30675987-30676066)
chr6 (17-95)||(16198420-16198498)
chr6 (47-95)||(1540104-1540152)
chr6 (47-95)||(8055951-8055999)
chr6 (47-95)||(8226719-8226767)
chr6 (47-95)||(12743241-12743289)
chr6 (47-95)||(18333785-18333833)
chr6 (15-95)||(19858083-19858163)
chr6 (47-95)||(22783149-22783197)
chr6 (56-96)||(22792418-22792458)
chr6 (47-95)||(24423468-24423516)
chr6 (47-95)||(26923638-26923686)
chr6 (47-95)||(33862718-33862766)
chr6 (47-95)||(33865199-33865247)
[»] chr7 (52 HSPs)
chr7 (68-211)||(2279321-2279464)
chr7 (68-195)||(12254995-12255122)
chr7 (68-199)||(15007649-15007779)
chr7 (51-211)||(12902178-12902338)
chr7 (68-211)||(16218918-16219061)
chr7 (15-179)||(9388865-9389029)
chr7 (68-195)||(22073708-22073836)
chr7 (68-195)||(16057119-16057246)
chr7 (68-195)||(47832600-47832727)
chr7 (15-195)||(15440122-15440302)
chr7 (58-174)||(3563555-3563671)
chr7 (68-199)||(14037040-14037169)
chr7 (68-199)||(14347070-14347199)
chr7 (15-194)||(15141179-15141358)
chr7 (68-199)||(14045612-14045741)
chr7 (68-199)||(14355642-14355771)
chr7 (68-199)||(16324793-16324921)
chr7 (68-199)||(15117311-15117439)
chr7 (68-199)||(16496215-16496345)
chr7 (68-194)||(18304573-18304700)
chr7 (15-95)||(48274526-48274606)
chr7 (68-199)||(15113785-15113913)
chr7 (68-199)||(9176835-9176965)
chr7 (68-199)||(1867233-1867362)
chr7 (68-194)||(9750751-9750878)
chr7 (133-173)||(5294567-5294606)
chr7 (133-173)||(5295740-5295779)
chr7 (133-173)||(5296913-5296952)
chr7 (15-95)||(9944957-9945037)
chr7 (15-95)||(14317463-14317543)
chr7 (15-95)||(17180476-17180556)
chr7 (47-95)||(26355173-26355221)
chr7 (47-95)||(26357625-26357673)
chr7 (68-103)||(17016597-17016632)
chr7 (15-86)||(17061130-17061201)
chr7 (15-86)||(44117384-44117455)
chr7 (160-206)||(20219479-20219524)
chr7 (15-103)||(28504476-28504565)
chr7 (15-103)||(44015058-44015147)
chr7 (47-95)||(457244-457292)
chr7 (47-95)||(11392495-11392543)
chr7 (47-95)||(14948312-14948360)
chr7 (47-95)||(15375906-15375954)
chr7 (47-95)||(16233444-16233492)
chr7 (47-95)||(16410981-16411029)
chr7 (15-95)||(18628487-18628567)
chr7 (15-95)||(18641193-18641273)
chr7 (47-95)||(20384316-20384364)
chr7 (47-95)||(24703145-24703193)
chr7 (47-95)||(24705592-24705640)
chr7 (47-95)||(27217782-27217830)
chr7 (15-91)||(38897496-38897572)
[»] scaffold0165 (1 HSPs)
scaffold0165 (68-211)||(26844-26987)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-211)||(13699-13895)
[»] chr8 (37 HSPs)
chr8 (15-211)||(20499414-20499610)
chr8 (58-211)||(982569-982722)
chr8 (68-195)||(21287013-21287140)
chr8 (15-207)||(38854400-38854592)
chr8 (68-199)||(13507232-13507362)
chr8 (68-199)||(13596764-13596894)
chr8 (68-195)||(7464904-7465031)
chr8 (68-206)||(17266144-17266280)
chr8 (51-211)||(6521144-6521304)
chr8 (19-145)||(21697367-21697493)
chr8 (68-173)||(17611295-17611399)
chr8 (68-145)||(22966829-22966906)
chr8 (15-174)||(28648222-28648381)
chr8 (68-199)||(14102352-14102480)
chr8 (47-168)||(15071302-15071423)
chr8 (68-179)||(5609843-5609954)
chr8 (51-174)||(22627548-22627672)
chr8 (15-103)||(19936187-19936275)
chr8 (68-199)||(17438664-17438794)
chr8 (68-199)||(19154012-19154142)
chr8 (68-195)||(19800629-19800756)
chr8 (68-199)||(22365477-22365606)
chr8 (68-182)||(40492028-40492142)
chr8 (16-103)||(23407266-23407354)
chr8 (47-95)||(22002676-22002724)
chr8 (68-103)||(20532536-20532571)
chr8 (153-199)||(39834499-39834544)
chr8 (51-96)||(22526433-22526478)
chr8 (15-95)||(1326392-1326472)
chr8 (47-95)||(1485323-1485371)
chr8 (68-96)||(2418003-2418031)
chr8 (47-95)||(4484201-4484249)
chr8 (47-95)||(5852486-5852534)
chr8 (47-95)||(14408637-14408685)
chr8 (47-95)||(14824697-14824745)
chr8 (15-95)||(20045356-20045436)
chr8 (56-96)||(28398512-28398552)
[»] chr4 (42 HSPs)
chr4 (58-205)||(12287344-12287491)
chr4 (15-195)||(52242365-52242545)
chr4 (68-204)||(46643652-46643788)
chr4 (68-211)||(11023-11166)
chr4 (15-211)||(15100104-15100300)
chr4 (15-195)||(39705433-39705614)
chr4 (68-195)||(43197840-43197967)
chr4 (68-175)||(15374280-15374386)
chr4 (16-95)||(23802354-23802433)
chr4 (68-211)||(53081303-53081444)
chr4 (19-145)||(3838097-3838223)
chr4 (68-173)||(15368481-15368585)
chr4 (68-173)||(15371990-15372094)
chr4 (19-145)||(20150844-20150970)
chr4 (68-173)||(16224330-16224434)
chr4 (68-179)||(15191124-15191235)
chr4 (119-205)||(15464182-15464268)
chr4 (51-174)||(16376707-16376829)
chr4 (15-199)||(15867817-15868000)
chr4 (68-199)||(32852240-32852370)
chr4 (15-95)||(54797833-54797913)
chr4 (12-86)||(6191334-6191408)
chr4 (15-95)||(14969974-14970054)
chr4 (15-86)||(44103111-44103182)
chr4 (18-103)||(21817874-21817960)
chr4 (16-103)||(22637317-22637406)
chr4 (47-95)||(7640379-7640427)
chr4 (15-95)||(18238773-18238853)
chr4 (47-95)||(44616212-44616260)
chr4 (47-95)||(50221531-50221579)
chr4 (68-103)||(17334214-17334249)
chr4 (15-103)||(14039503-14039593)
chr4 (15-103)||(16597499-16597588)
chr4 (51-103)||(3097493-3097546)
chr4 (15-103)||(7799509-7799598)
chr4 (47-95)||(1836713-1836761)
chr4 (47-95)||(12032964-12033012)
chr4 (47-95)||(14717913-14717961)
chr4 (47-95)||(15117545-15117593)
chr4 (15-95)||(19617343-19617422)
chr4 (56-96)||(26790279-26790319)
chr4 (47-95)||(29268277-29268325)
[»] scaffold0914 (1 HSPs)
scaffold0914 (15-208)||(3854-4047)
[»] chr5 (27 HSPs)
chr5 (68-211)||(20026072-20026215)
chr5 (15-195)||(26011183-26011363)
chr5 (15-195)||(22144841-22145021)
chr5 (68-211)||(22177347-22177488)
chr5 (70-195)||(21328724-21328849)
chr5 (29-146)||(24068247-24068364)
chr5 (68-211)||(21740745-21740888)
chr5 (68-164)||(5888390-5888487)
chr5 (51-174)||(9078765-9078889)
chr5 (51-174)||(24529984-24530107)
chr5 (68-178)||(27988105-27988213)
chr5 (68-199)||(36315366-36315496)
chr5 (69-195)||(21870803-21870929)
chr5 (69-195)||(21875083-21875209)
chr5 (19-103)||(22958712-22958797)
chr5 (15-95)||(2153899-2153979)
chr5 (47-95)||(263961-264009)
chr5 (47-95)||(10732130-10732178)
chr5 (15-95)||(20765177-20765257)
chr5 (15-95)||(22413110-22413190)
chr5 (15-95)||(39246057-39246137)
chr5 (15-95)||(20901273-20901353)
chr5 (47-95)||(20909936-20909984)
chr5 (47-95)||(29346902-29346950)
chr5 (47-95)||(29349375-29349423)
chr5 (47-95)||(29351848-29351896)
chr5 (47-95)||(39364305-39364353)
[»] scaffold0413 (2 HSPs)
scaffold0413 (68-211)||(13420-13564)
scaffold0413 (12-103)||(14762-14854)
[»] scaffold0075 (3 HSPs)
scaffold0075 (68-211)||(50746-50889)
scaffold0075 (67-172)||(7505-7610)
scaffold0075 (15-104)||(538-627)
[»] scaffold0010 (1 HSPs)
scaffold0010 (68-211)||(59886-60028)
[»] scaffold0737 (1 HSPs)
scaffold0737 (68-205)||(926-1062)
[»] chr2 (32 HSPs)
chr2 (15-211)||(20519267-20519463)
chr2 (70-211)||(18786012-18786153)
chr2 (44-211)||(7680072-7680239)
chr2 (68-205)||(19672684-19672820)
chr2 (15-195)||(23705428-23705608)
chr2 (68-204)||(22412315-22412449)
chr2 (68-211)||(23208127-23208269)
chr2 (15-195)||(25176634-25176814)
chr2 (15-195)||(23137900-23138080)
chr2 (15-195)||(23549690-23549870)
chr2 (68-199)||(23792117-23792246)
chr2 (68-199)||(23005593-23005722)
chr2 (68-199)||(25109711-25109840)
chr2 (125-174)||(23660835-23660884)
chr2 (68-194)||(21326779-21326905)
chr2 (68-199)||(22458690-22458818)
chr2 (15-103)||(27754408-27754497)
chr2 (68-194)||(21317870-21317996)
chr2 (15-95)||(22172926-22173006)
chr2 (162-211)||(6972-7021)
chr2 (26-95)||(24528825-24528894)
chr2 (47-95)||(26506300-26506348)
chr2 (47-95)||(26508778-26508826)
chr2 (47-95)||(27919957-27920005)
chr2 (15-95)||(45027167-45027247)
chr2 (47-95)||(572320-572368)
chr2 (47-95)||(18809864-18809912)
chr2 (47-95)||(23131783-23131831)
chr2 (47-95)||(23134250-23134298)
chr2 (47-95)||(23711206-23711254)
chr2 (47-95)||(32038690-32038738)
chr2 (47-95)||(39683237-39683285)
[»] scaffold0621 (1 HSPs)
scaffold0621 (68-199)||(9333-9464)
[»] scaffold0012 (1 HSPs)
scaffold0012 (68-195)||(228262-228389)
[»] chr3 (51 HSPs)
chr3 (16-199)||(37250265-37250447)
chr3 (68-205)||(23275480-23275616)
chr3 (68-195)||(2044856-2044983)
chr3 (68-195)||(2047585-2047712)
chr3 (68-195)||(52522929-52523056)
chr3 (68-205)||(15471706-15471843)
chr3 (15-211)||(1464580-1464776)
chr3 (51-199)||(42387177-42387326)
chr3 (15-174)||(18439347-18439506)
chr3 (47-174)||(8500256-8500383)
chr3 (51-174)||(40212906-40213029)
chr3 (46-211)||(22109459-22109622)
chr3 (68-173)||(24339940-24340044)
chr3 (68-206)||(12386244-12386381)
chr3 (51-174)||(25475569-25475693)
chr3 (67-174)||(27165988-27166095)
chr3 (68-179)||(22792103-22792214)
chr3 (15-103)||(12171293-12171382)
chr3 (68-199)||(14501988-14502118)
chr3 (68-211)||(21838284-21838425)
chr3 (72-199)||(28195452-28195578)
chr3 (68-199)||(10557649-10557779)
chr3 (68-194)||(12851565-12851692)
chr3 (12-104)||(45798097-45798190)
chr3 (15-174)||(53300772-53300930)
chr3 (15-103)||(13443085-13443174)
chr3 (15-103)||(53069848-53069937)
chr3 (68-104)||(23412376-23412412)
chr3 (68-192)||(45219412-45219533)
chr3 (15-95)||(45577602-45577682)
chr3 (15-95)||(50243836-50243916)
chr3 (68-103)||(17738197-17738232)
chr3 (68-103)||(19039517-19039552)
chr3 (68-130)||(14235331-14235393)
chr3 (68-145)||(605522-605598)
chr3 (15-95)||(21619425-21619505)
chr3 (68-144)||(43927982-43928058)
chr3 (15-95)||(15978456-15978536)
chr3 (47-95)||(45606119-45606167)
chr3 (47-95)||(55477413-55477461)
chr3 (160-199)||(45798011-45798050)
chr3 (12-86)||(29171797-29171871)
chr3 (68-141)||(320137-320209)
chr3 (68-141)||(23317937-23318009)
chr3 (15-103)||(49388792-49388881)
chr3 (47-95)||(7780538-7780586)
chr3 (47-95)||(10246915-10246963)
chr3 (47-95)||(13150981-13151029)
chr3 (47-95)||(13153449-13153497)
chr3 (47-95)||(17464099-17464147)
chr3 (47-95)||(34160247-34160295)
[»] scaffold0114 (1 HSPs)
scaffold0114 (68-205)||(46242-46378)
[»] scaffold0040 (1 HSPs)
scaffold0040 (51-211)||(102771-102931)
[»] scaffold0130 (1 HSPs)
scaffold0130 (68-211)||(905-1049)
[»] scaffold0007 (1 HSPs)
scaffold0007 (68-206)||(17107-17244)
[»] scaffold0100 (1 HSPs)
scaffold0100 (15-209)||(23654-23848)
[»] scaffold0034 (1 HSPs)
scaffold0034 (68-205)||(33276-33413)
[»] scaffold0476 (1 HSPs)
scaffold0476 (15-199)||(8567-8750)
[»] scaffold0021 (2 HSPs)
scaffold0021 (57-187)||(135515-135644)
scaffold0021 (57-187)||(144223-144352)
[»] scaffold0320 (1 HSPs)
scaffold0320 (68-205)||(12777-12913)
[»] scaffold0555 (1 HSPs)
scaffold0555 (68-211)||(9769-9912)
[»] scaffold0163 (1 HSPs)
scaffold0163 (68-189)||(26412-26533)
[»] scaffold0530 (1 HSPs)
scaffold0530 (15-195)||(177-357)
[»] scaffold1403 (1 HSPs)
scaffold1403 (68-211)||(1350-1491)
[»] scaffold0273 (1 HSPs)
scaffold0273 (44-195)||(8616-8767)
[»] scaffold0243 (1 HSPs)
scaffold0243 (15-195)||(5271-5451)
[»] scaffold0231 (1 HSPs)
scaffold0231 (68-211)||(11182-11325)
[»] scaffold0078 (1 HSPs)
scaffold0078 (51-194)||(11321-11464)
[»] scaffold0247 (2 HSPs)
scaffold0247 (68-173)||(17245-17349)
scaffold0247 (15-88)||(1108-1181)
[»] scaffold0022 (2 HSPs)
scaffold0022 (68-204)||(81109-81242)
scaffold0022 (15-95)||(117473-117553)
[»] scaffold0005 (1 HSPs)
scaffold0005 (67-211)||(268480-268622)
[»] scaffold0138 (2 HSPs)
scaffold0138 (68-195)||(13706-13833)
scaffold0138 (68-199)||(17365-17495)
[»] scaffold0122 (3 HSPs)
scaffold0122 (51-174)||(25249-25372)
scaffold0122 (51-174)||(32679-32802)
scaffold0122 (47-95)||(33816-33864)
[»] scaffold0420 (1 HSPs)
scaffold0420 (69-206)||(5461-5597)
[»] scaffold0151 (1 HSPs)
scaffold0151 (15-174)||(10957-11117)
[»] scaffold0162 (1 HSPs)
scaffold0162 (68-204)||(25475-25609)
[»] scaffold0139 (1 HSPs)
scaffold0139 (68-199)||(39159-39289)
[»] scaffold0333 (2 HSPs)
scaffold0333 (68-195)||(7405-7532)
scaffold0333 (68-195)||(14785-14912)
[»] scaffold0540 (1 HSPs)
scaffold0540 (51-174)||(197-321)
[»] scaffold0009 (1 HSPs)
scaffold0009 (68-199)||(86382-86510)
[»] scaffold0120 (5 HSPs)
scaffold0120 (19-145)||(29330-29456)
scaffold0120 (15-194)||(46718-46899)
scaffold0120 (15-194)||(32107-32288)
scaffold0120 (51-103)||(10258-10311)
scaffold0120 (51-103)||(16969-17022)
[»] scaffold0074 (1 HSPs)
scaffold0074 (72-174)||(38173-38275)
[»] scaffold0026 (1 HSPs)
scaffold0026 (15-199)||(40655-40840)
[»] scaffold0003 (1 HSPs)
scaffold0003 (68-174)||(339152-339258)
[»] scaffold0020 (2 HSPs)
scaffold0020 (122-195)||(15086-15159)
scaffold0020 (68-97)||(15050-15079)
[»] scaffold2004 (1 HSPs)
scaffold2004 (68-195)||(54-181)
[»] scaffold0056 (2 HSPs)
scaffold0056 (67-174)||(16414-16521)
scaffold0056 (15-103)||(78540-78629)
[»] scaffold0627 (1 HSPs)
scaffold0627 (68-174)||(717-823)
[»] scaffold0098 (1 HSPs)
scaffold0098 (68-199)||(29550-29680)
[»] scaffold0076 (1 HSPs)
scaffold0076 (68-199)||(22499-22628)
[»] scaffold0072 (1 HSPs)
scaffold0072 (68-199)||(62331-62459)
[»] scaffold0601 (1 HSPs)
scaffold0601 (68-185)||(7512-7627)
[»] scaffold0261 (1 HSPs)
scaffold0261 (68-199)||(17468-17598)
[»] scaffold0192 (1 HSPs)
scaffold0192 (68-172)||(10725-10829)
[»] scaffold0184 (1 HSPs)
scaffold0184 (68-199)||(247-377)
[»] scaffold0142 (2 HSPs)
scaffold0142 (68-194)||(1636-1763)
scaffold0142 (15-86)||(17673-17744)
[»] scaffold0124 (1 HSPs)
scaffold0124 (68-194)||(23851-23978)
[»] scaffold0013 (1 HSPs)
scaffold0013 (15-103)||(31147-31235)
[»] scaffold0970 (1 HSPs)
scaffold0970 (15-195)||(1376-1555)
[»] scaffold0695 (1 HSPs)
scaffold0695 (19-95)||(6866-6942)
[»] scaffold0090 (1 HSPs)
scaffold0090 (68-206)||(2847-2983)
[»] scaffold1355 (1 HSPs)
scaffold1355 (15-103)||(9-98)
[»] scaffold0686 (1 HSPs)
scaffold0686 (68-199)||(2102-2232)
[»] scaffold0358 (2 HSPs)
scaffold0358 (15-86)||(5605-5676)
scaffold0358 (15-86)||(15065-15136)
[»] scaffold0235 (1 HSPs)
scaffold0235 (15-104)||(14520-14610)
[»] scaffold0112 (1 HSPs)
scaffold0112 (13-95)||(23069-23151)
[»] scaffold0180 (1 HSPs)
scaffold0180 (68-133)||(31370-31434)
[»] scaffold0028 (4 HSPs)
scaffold0028 (16-103)||(277-366)
scaffold0028 (47-95)||(137603-137651)
scaffold0028 (47-95)||(142541-142589)
scaffold0028 (47-95)||(145010-145058)
[»] scaffold0006 (2 HSPs)
scaffold0006 (68-199)||(97869-97999)
scaffold0006 (68-199)||(107147-107277)
[»] scaffold0535 (1 HSPs)
scaffold0535 (15-95)||(7599-7679)
[»] scaffold0228 (3 HSPs)
scaffold0228 (15-86)||(5381-5452)
scaffold0228 (15-86)||(12963-13034)
scaffold0228 (15-86)||(22915-22986)
[»] scaffold0145 (1 HSPs)
scaffold0145 (15-95)||(8194-8274)
[»] scaffold0121 (1 HSPs)
scaffold0121 (15-103)||(7681-7769)
[»] scaffold0083 (1 HSPs)
scaffold0083 (15-95)||(42320-42400)
[»] scaffold0017 (1 HSPs)
scaffold0017 (68-194)||(190484-190610)
[»] scaffold0628 (1 HSPs)
scaffold0628 (15-86)||(1973-2044)
[»] scaffold0001 (1 HSPs)
scaffold0001 (69-192)||(84457-84577)
[»] scaffold1434 (1 HSPs)
scaffold1434 (15-103)||(122-212)
[»] scaffold0102 (1 HSPs)
scaffold0102 (136-194)||(47732-47789)
[»] scaffold1257 (1 HSPs)
scaffold1257 (27-103)||(1460-1537)
[»] scaffold0876 (1 HSPs)
scaffold0876 (51-103)||(2265-2318)
[»] scaffold0810 (1 HSPs)
scaffold0810 (15-103)||(4764-4853)
[»] scaffold0253 (1 HSPs)
scaffold0253 (51-103)||(3752-3805)
[»] scaffold0230 (1 HSPs)
scaffold0230 (15-95)||(14871-14951)
[»] scaffold0081 (1 HSPs)
scaffold0081 (68-141)||(4004-4076)
[»] scaffold0070 (1 HSPs)
scaffold0070 (15-103)||(5355-5444)
[»] scaffold0507 (1 HSPs)
scaffold0507 (155-195)||(7346-7386)
[»] scaffold0481 (1 HSPs)
scaffold0481 (47-95)||(51-99)
[»] scaffold0444 (1 HSPs)
scaffold0444 (47-95)||(14315-14363)
[»] scaffold0319 (1 HSPs)
scaffold0319 (15-95)||(6136-6216)
[»] scaffold0297 (1 HSPs)
scaffold0297 (47-95)||(2897-2945)
[»] scaffold0134 (1 HSPs)
scaffold0134 (47-95)||(38743-38791)
[»] scaffold0107 (1 HSPs)
scaffold0107 (47-95)||(51307-51355)
[»] scaffold0101 (1 HSPs)
scaffold0101 (19-95)||(427-503)
[»] scaffold0044 (1 HSPs)
scaffold0044 (47-95)||(41321-41369)
[»] scaffold0031 (1 HSPs)
scaffold0031 (47-95)||(56199-56247)
[»] scaffold0023 (1 HSPs)
scaffold0023 (47-95)||(95332-95380)
[»] scaffold0019 (1 HSPs)
scaffold0019 (15-95)||(158706-158786)


Alignment Details
Target: scaffold0505 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 205 - 446
Target Start/End: Complemental strand, 4637 - 4396
Alignment:
Q  205 atggttatgattaaattattaaattcaaatatgattttatcgtacttatatgcatgtttgattaaatttggtttgatactgtgatgatatgaatacgatt 304  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |    
T  4637 atggttatgattaaattattaaattcaaatatgattttatcatacttatatgcatgtttgattaaatttgatttggtactgtgatgatatgaatacgaat 4538  T
Q  305 cgtacgtgtctgttcgttttacaagcttattgaatatgcaaattaatatatggttttatgtgtgtatgctatcattttgacagtatgtctttataaattt 404  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4537 cgtacgtgtctgttcgttttacaagcttattgaataggcaaattaatatatggttttatgtgtgtctgctatcattttgacagtatgtctttataaattt 4438  T
Q  405 atattttaatgactaatatattgttttgtaatcgctaatttt 446  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  4437 atattttaatgactaatatattgttttgtaatccctaatttt 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 237 - 361
Target Start/End: Original strand, 25262357 - 25262481
Alignment:
Q  237 gattttatcgtacttatatgcatgtttgattaaatttggtttgatactgtgatgatatgaatacgattcgtacgtgtctgttcgttttacaagcttattg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25262357 gattttatcgtacttatatgcatgtttgattaaatttggtttgatactgtgatgatatgaatacgattcgtacgtgtctgttcgttttacaagcttattg 25262456  T
Q  337 aatatgcaaattaatatatggtttt 361  Q
    |||||||||||||||||||||||||    
T  25262457 aatatgcaaattaatatatggtttt 25262481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 16759645 - 16759508
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16759645 taaggtaagggtgagactagcattcaattctattaatctgtataattcttatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 16759546  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    |||||||||||||||||||||||||||||||| |||||    
T  16759545 gggttaaagtgagaaattgaggattaattgatgtagaa 16759508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 25262233 - 25262360
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25262233 taagataagggtgagactagcattcaattctattaatctgtataattctgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 25262332  T
Q  168 gggtta---aagtgagaaattgaggatt 192  Q
    ||||||   |||||||||||||||||||    
T  25262333 gggttaaataagtgagaaattgaggatt 25262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 21857035 - 21857231
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| || | | | | |||| |||| |||||| ||   |||||||||||||||||||| |||||||| ||||||  | |||||||    
T  21857035 gagaaaaagccaagagaagagaaagagacccagagagctgcgattttcattgttaaggtaagggtgagactagaattcaattatattaacctatataatt 21857134  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
     ||||  ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  21857135 ctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattagggttaaagagagaaattgaggattaattgatgtagaatggtta 21857231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 41049172 - 41049302
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||| ||||||||||||||| | || ||||||||||| |||||    
T  41049172 taaggtaagggtgagactagcattcaattctattaagttgtataattatgatggttgtattcaacaagtgtaggattaatttggagaagttgga-aatta 41049270  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||| |||||||||||    
T  41049271 gggttaaagtgagaaattgatgattaattgat 41049302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 35260280 - 35260423
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 166  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  35260280 taaggtaagggtgagactaacattcaattctattaagctgtataattttgatggttgtatttaacaagtgtaagattgattttagagaa-ttggagaatt 35260378  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||||| | ||||||||||| |||||||||| |||||| ||||    
T  35260379 agggttaaggcgagaaattgagaattaattgatgtagaattgtta 35260423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 22921016 - 22921196
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatt-ttgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| ||||||||||||||||| | |||||||| || |||| || || | ||||||||||||||||||| ||||||||||||||||  | ||| ||    
T  22921016 gagaaaaagccaagagaagggagaaagacctagagtgttgcgattatttattc-taaggtaagggtgagactaacattcaattctattaacctatatgat 22921114  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    |   ||  ||||||||| |||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  22921115 tcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaactagggttaatgagagaaattgaggattaat 22921196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 52927252 - 52927395
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| ||| ||||  ||||||||| |||||||| ||||||||||||||||||||| || ||    
T  52927252 taaggtaagggtgagactaacattcaattctattaacctatatgattctgatgattgtatttagcaagtgtatgattgaattagagaagttggaaaacta 52927351  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | |  ||||||||||||||||||| |||||||||||    
T  52927352 gggttaatgaggaaaattgaggattaattgatgtagaatggtta 52927395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 35980889 - 35981032
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||| |||||| |||||||  |||| ||| |||| |||  |||||||||||||||||||||||||||| ||||||| || ||    
T  35980889 taaggtaagggtgagactagcaatcaattatattaatcggtatgattctgatggttaaatttaacaagtgtaggattgaattagaggagttggaaaacta 35980988  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
     |||||| | |  |||||||| |||||||||| |||||||||||    
T  35980989 tggttaatgaggaaaattgagcattaattgatgtagaatggtta 35981032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 40390295 - 40390169
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 118  Q
    |||| ||||||||||||||||| | |||||| |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  40390295 aaaagccaagagaagggagaaacacctagagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 40390196  T
Q  119 tagttgtatttaacaagtgtaggattg 145  Q
    |  || |||||||||||||||||||||    
T  40390195 tgattttatttaacaagtgtaggattg 40390169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 21473846 - 21473742
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || |||||| || |||||||||||||||||||||||||| ||||||    
T  21473846 taaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttagcaggtgtaggattgaattagagaagttgg-gaatta 21473748  T
Q  168 gggtta 173  Q
    ||||||    
T  21473747 gggtta 21473742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 49262096 - 49261932
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  ||   |||||||||||||||| |||||||||||||||||||| | ||| |||    
T  49262096 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaatttctaaggtaagggtgagattagcattcaattctattaatctatatgatt 49261997  T
Q  115 ttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaattagggttaaagtga 179  Q
     |||| |||||||||| |||| |||||||| || ||||||||||| |||||||| |||||||||||    
T  49261996 ctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatta-ggttaaagtga 49261932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 50613239 - 50613376
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||| |||||||| |||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  50613239 taaggtaagggtgagactaacattcaatcctattaag-tctgtaattatgattgttgtatttaacaagtgtaggatttgttttagaaaagttg-agaatt 50613336  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    ||||||||||||| ||||||| ||||||||||| ||||||    
T  50613337 agggttaaagtgataaattgatgattaattgatgtagaat 50613376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 50621067 - 50621204
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||| |||||||| |||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  50621067 taaggtaagggtgagactaacattcaatcctattaag-tctgtaattatgattgttgtatttaacaagtgtaggatttgttttagaaaagttg-agaatt 50621164  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    ||||||||||||| ||||||| ||||||||||| ||||||    
T  50621165 agggttaaagtgataaattgatgattaattgatgtagaat 50621204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 13212143 - 13212269
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 118  Q
    |||| ||||| ||||||||||| ||||| || |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  13212143 aaaagccaagggaagggagaaacatctaaagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 13212242  T
Q  119 tagttgtatttaacaagtgtaggattg 145  Q
    |  || |||||||||||||||||||||    
T  13212243 tgattttatttaacaagtgtaggattg 13212269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 26065848 - 26065755
Alignment:
Q  111 aattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    |||| |||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  26065848 aattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aattagggttaaagtgagaaattgatgattaattgatgtagaa 26065755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 29777595 - 29777468
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga 146  Q
    |||||||| ||||||||   |||||||||||||||||||| | | ||||||||||||| |  |||||| ||||  ||||||||| ||||||| |||||||    
T  29777595 gagtgctgcgattttgagttataaggtaagggtgagactaacttacaattctattaatctaaataattctgatgattgtatttagcaagtgttggattga 29777496  T
Q  147 attagagaagttggagaattagggttaa 174  Q
    |||||| | |||||||||||||||||||    
T  29777495 attagaaaggttggagaattagggttaa 29777468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 33681929 - 33681798
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | |  |||||||||||| | ||| ||| ||||| ||||||||| |||||||||||||||||||||||||| | | || ||    
T  33681929 taaggtaagggtgagactaacttataattctattaatctatatgattctgataattgtatttagcaagtgtaggattgaattagagaagtcgaaaaacta 33681830  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||| | |  |||||||||||||||||||    
T  33681829 gggttaatgaggaaaattgaggattaattgat 33681798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 28193655 - 28193766
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    |||||||||||||||||||| |||||||||||||||| | ||| |||||||| |||||| ||| |||| |||||||| || ||||||||||| |||||||    
T  28193655 taaggtaagggtgagactagtattcaattctattaatctatatgattttgatggttgtaattagcaagagtaggattggatttagagaagtttgagaatt 28193754  T
Q  167 agggttaaagtga 179  Q
    | |||||||||||    
T  28193755 a-ggttaaagtga 28193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 26065913 - 26065847
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaa 134  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  26065913 taaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaa 26065847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 14294728 - 14294858
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  14294728 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 14294825  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||| ||||||||||   |||||||||||    
T  14294826 agggttaaggtgagaaatttgagattaattgat 14294858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 21343043 - 21342913
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    ||||||||||||| ||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||  || |||||| ||| ||||||    
T  21343043 taaggtaagggtgggactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttg-agaatt 21342946  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||   |||||||||||    
T  21342945 agggttaaagtgagaaatttgagattaattgat 21342913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 21347908 - 21347778
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    ||||||||||||| ||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||  || |||||| ||| ||||||    
T  21347908 taaggtaagggtgggactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttg-agaatt 21347811  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||   |||||||||||    
T  21347810 agggttaaagtgagaaatttgagattaattgat 21347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 27652392 - 27652521
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||| ||| |  |||||||| ||||||||||    
T  27652392 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtagaattagttttagagaa-ttggagaatt 27652489  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |  |||||||||||||||||| |||||||||||    
T  27652490 a-agttaaagtgagaaattgatgattaattgat 27652521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 51131508 - 51131378
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  51131508 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 51131411  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||| ||||||||||   |||||||||||    
T  51131410 agggttaaggtgagaaatttgagattaattgat 51131378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 12272483 - 12272413
Alignment:
Q  126 atttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattg 197  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  12272483 atttaacaagtgtaggattaatttagagaagttggagaatta-ggttaaagtgaggaattgatgattaattg 12272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 16093024 - 16093151
Alignment:
Q  71 ggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaattagg 169  Q
    |||||||||||||||| ||||||||| ||||||  | ||| |||   ||| ||  ||||||| ||||||||||||| || |||||| ||| |||||||||    
T  16093024 ggtaagggtgagactaacattcaattttattaag-tctatgattcatataattaaatttaaccagtgtaggattgattttagagaatttg-agaattagg 16093121  T
Q  170 gttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||| | |||||||||    
T  16093122 gttaaagtgagaaattgatggttaattgat 16093151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 15859264 - 15859352
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 103  Q
    |||||||| ||||||||||||||||| | |||    |||| |||||||||   |||||||||||||||||||||||| |||||||||||    
T  15859264 gagaaaaagccaagagaagggagaaagacctacgaagctgcgattttgattattaaggtaagggtgagactagcatttaattctattaa 15859352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 20249250 - 20249161
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||| | ||||||||||| |||||| |    ||||||||||||||||||| | || ||||||||||||    
T  20249250 gagaaaaagccaagagaagggagaaagacctagagtgctgcgattttcactgttaaggtaagggtgagactaactttgcaattctattaa 20249161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 20453583 - 20453663
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| | ||||||||||||||| ||||||   |||| |||||||||   ||||||||||||||||||| ||||||||    
T  20453583 gagaaaaagctaagagaagggagaaagatctagcaagctgcgattttgattgttaaggtaagggtgagactaacattcaat 20453663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 50687562 - 50687433
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    ||||||||| ||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||||  || |||||| ||| ||||||    
T  50687562 taaggtaagagtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttg-agaatt 50687465  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    ||| |||||| |||||||||| |||||||||||    
T  50687464 agg-ttaaagggagaaattgatgattaattgat 50687433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 433979 - 433890
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  433979 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 433890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 16382087 - 16381960
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 165  Q
    ||||||||||||| ||||||||||||||||||||||  | | |||||   || ||||||||||||| | ||||||||| |  || ||| | || ||||||    
T  16382087 taaggtaagggtgggactagcattcaattctattaa-gtctgtaattcatatggttgtatttaacatgttgtaggattagtttttgagga-tttgagaat 16381990  T
Q  166 tagggttaaagtgagaaattgaggattaat 195  Q
    ||||||||||||||| |||||| |||||||    
T  16381989 tagggttaaagtgaggaattgatgattaat 16381960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 34510717 - 34510664
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  34510717 gctgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 34510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 13989835 - 13989787
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  13989835 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 13989787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 21474277 - 21474325
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  21474277 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 21474325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 21708254 - 21708174
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||| ||||| | ||||||    
T  21708254 gagaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgggactaaccttcaat 21708174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 21712797 - 21712717
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||| ||||| | ||||||    
T  21712797 gagaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgggactaaccttcaat 21712717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 21922482 - 21922530
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  21922482 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 21922530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 116; Significance: 8e-59; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 15328 - 15471
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15328 taaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtaggattaaattagagaagttggagaatta 15427  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  15428 gggtttaagtgagaaattgaggattaattgatgtagaatggtta 15471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 14141 - 13981
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-att 149  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||| ||||  ||    
T  14141 gctgcgattttgatttctaaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtaggtttgatttt 14042  T
Q  150 agagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  14041 agagaa-ttagagaattagggttaaggtgagaaattgaggattaattgatatagaattgtta 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 4917 - 4787
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 165  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||| |||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  4917 taaggtaagggtgggactagcattcaattctattaa-gtctatgattctgatggttgtatttaacaggttgtaggattagtttttgagaa-tttgagaat 4820  T
Q  166 tagggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||||||||||||||||| |||||||||||    
T  4819 ta-ggttaaagtgagaaattgatgattaattgat 4787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 9097639 - 9097788
Alignment:
Q  56 gattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaa 155  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| |||| || ||||||||||||||||||||||||||||||||    
T  9097639 gattttgattcttaaggtaagggtgagactagcattcaattctattaatctatataattatgatggtcgtatttaacaagtgtaggattgaattagagaa 9097738  T
Q  156 gttggagaattagggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  9097739 gttggagaattagggttaaagagagaaattgaggattaattgatgtagaa 9097788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 25645230 - 25645070
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||||||||||||    ||||||||||||||||||||||||||| ||||||||| | ||| ||| ||||| ||||||||| ||| |||||||| ||||||    
T  25645230 gctgtgattttgaattttaaggtaagggtgagactagcattcaactctattaatctatatgattctgataattgtatttagcaaatgtaggatcgaatta 25645131  T
Q  151 gagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||||||| ||  |||||||| | |||||||||||||||||||||| |||||||||||    
T  25645130 gagaagttggaaaacaagggttaatgagagaaattgaggattaattgatgtagaatggtta 25645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 27332510 - 27332653
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||||||||||   | |||||||   || |||||||||| ||| ||||||||||||||| ||||||| || || ||    
T  27332510 taaggtaagggtgagactagcattcaattctattatcctatataattcatatggttgtatttagcaaatgtaggattgaattatagaagtttgaaaacta 27332609  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  27332610 gggttaatgagagaaattgaggattaattgatgtagaatggtta 27332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 27393250 - 27393393
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||||||||||   | |||||||   || |||||||||| ||| ||||||||||||||| ||||||| || || ||    
T  27393250 taaggtaagggtgagactagcattcaattctattatcctatataattcatatggttgtatttagcaaatgtaggattgaattatagaagtttgaaaacta 27393349  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  27393350 gggttaatgagagaaattgaggattaattgatgtagaatggtta 27393393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 19669389 - 19669231
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||  |||||||||||||||||||| |||||||| |||||||  ||||||||| |||| |||||||||| |||||   ||||| | |||    
T  19669389 gctgcgattttgatttataaggtaagggtgagactaacattcaatcctattaagttgtataattctgatggttgtatttagcaagttgtggattaattta 19669290  T
Q  151 gagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    || |||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  19669289 gaaaagttgga-aatta-ggttaaagtgagaaattgatgattaattgatgtagaatggtta 19669231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 19302727 - 19302850
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||| ||||| |||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  19302727 gctgcgattttgatctataagataagggtgagactaacttgcaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 19302826  T
Q  151 gagaagttggagaattagggttaa 174  Q
    ||||||| ||||||||||||||||    
T  19302827 gagaagtcggagaattagggttaa 19302850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 23665054 - 23665165
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| |||| |||||||||| |||| |||||||| || ||||||||||| |||||||    
T  23665054 taaggtaagggtgagactagcattcaattctattaatctatatgattctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatt 23665153  T
Q  167 agggttaaagtga 179  Q
    | |||||||||||    
T  23665154 a-ggttaaagtga 23665165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 23022262 - 23022170
Alignment:
Q  101 taatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggatta 193  Q
    |||| ||||| ||| |||||||| || |||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  23022262 taatctgtatgattctgatagttataattaacaagcgtaggattgaattagagaagttggaaaattagggttaaagagagaaattgagaatta 23022170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 18409029 - 18409135
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| ||||| |||||||||||||||||||| |||||||||    
T  18409029 taaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtataggattgaattagagaagtcggagaatta 18409128  T
Q  168 gggttaa 174  Q
    |||||||    
T  18409129 gggttaa 18409135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 19024347 - 19024217
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    |||||||||||||||||| |||||||||||||||||  | | ||||| ||||  ||   |||||||||||||||||||  || |||||| ||| ||||||    
T  19024347 taaggtaagggtgagacttgcattcaattctattaag-tctgtaattctgatgattaagtttaacaagtgtaggattggttttagagaatttg-agaatt 19024250  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||  ||||||||||||    
T  19024249 agggttaaagtgagaaatttgggattaattgat 19024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 5833717 - 5833795
Alignment:
Q  128 ttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 207  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | ||| ||||||| |||||||||| |||||||    
T  5833717 ttaacaagt-taggattgaattagagaagttggaaaactagggttaatgagaggaattgagaattaattgatgtagaatg 5833795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 22158006 - 22158084
Alignment:
Q  128 ttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 207  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | ||||||||||| |||| ||||| |||||||    
T  22158006 ttaacaagt-taggattgaattagagaagttggaaaactagggttaatgagagaaattgagaattagttgatgtagaatg 22158084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 23539882 - 23539759
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaaca-agtgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||| ||||||||||| ||||||||||  ||||||||| |||| ||||||||||||| | ||||||||| | ||       || |||||||    
T  23539882 taaggtaagggtgggactagcattcgattctattaa-gtgtataattctgatggttgtatttaacagattgtaggatt-agtt-------tttgagaatt 23539792  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    ||| | ||||||||||||||| |||||||||||    
T  23539791 aggttaaaagtgagaaattgatgattaattgat 23539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 20177985 - 20177907
Alignment:
Q  128 ttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 207  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | |||| |||||| |||| ||||  |||||||    
T  20177985 ttaacaagt-taggattgaattagagaagttggaaaactagggttaatgagagagattgagaattagttgacgtagaatg 20177907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 20555981 - 20556062
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaatt 96  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||| ||||| |||||||||    
T  20555981 gagaaaaacccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgggactaacattcaatt 20556062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 17882657 - 17882737
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||| ||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  17882657 gagaaaaagccaagagaatggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 17882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 18343160 - 18343112
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  18343160 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 18343112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 19003582 - 19003502
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||||||||||||||||||| | || |||||  |||| |||||| ||   |||||||||||||| |||| ||||||||    
T  19003582 gagaaaaaaccaagagaagggaggacaacctagaaagctgcgattttcattgttaaggtaagggtgaaactaacattcaat 19003502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 18457686 - 18457615
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  18457686 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 18457615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 18820979 - 18821050
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  18820979 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 18821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 27572069 - 27572140
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| | ||||||||||||||| | |||||| |||| |||||| ||   |||||||||||||||||||    
T  27572069 gagaaaaagctaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgagacta 27572140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 29808027 - 29808098
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  29808027 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 29808098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 30675987 - 30676066
Alignment:
Q  16 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||||||||| ||| ||||    
T  30675987 agaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacatgcaat 30676066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 16198498 - 16198420
Alignment:
Q  17 gaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  16198498 gaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgtgactaacattcaat 16198420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 1540104 - 1540152
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||| | ||||||||    
T  1540104 gagtgctgcgattttcatctataaggtaagggtgagacaaacattcaat 1540152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 8055999 - 8055951
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  8055999 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 8055951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 8226719 - 8226767
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  8226719 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 8226767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 12743289 - 12743241
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  12743289 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 12743241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 18333785 - 18333833
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  18333785 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 18333833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 19858083 - 19858163
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || |  |||||||   |||||||||||||| ||||| ||||||||    
T  19858083 gagaaaaagccaagagaagggagaaagacctagaaagcggcaattttgagttataaggtaagggtgggactaacattcaat 19858163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 22783197 - 22783149
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  22783197 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 22783149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 22792418 - 22792458
Alignment:
Q  56 gattttgatccataaggtaagggtgagactagcattcaatt 96  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  22792418 gattttgaatcataaggtaagggtgagactaacattcaatt 22792458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 24423516 - 24423468
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  24423516 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 24423468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26923638 - 26923686
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  26923638 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 26923686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 33862766 - 33862718
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  33862766 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 33862718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 33865247 - 33865199
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  33865247 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 33865199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 2279321 - 2279464
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2279321 taaggtaagggtgagactagcattcaattctattaatctatataattctgatagttgtatttaacaagtgtatgattgaattagagaagttggagaatta 2279420  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||    
T  2279421 gggttaaagagagaaattgaggagtaattgatgtagaacggtta 2279464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 12254995 - 12255122
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  12254995 taaggtaagggtgagactagcattcaattctattaatctgtatgattctgatagttataattaacaagtgtaggattgaattagagaagttggaaaatta 12255094  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| ||||||||||||||||||    
T  12255095 gggttaaagagagaaattgaggattaat 12255122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 15007649 - 15007779
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||| | |||||||||||||| |||||    
T  15007649 taaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aatta 15007747  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||||||||||||||||||    
T  15007748 gggttaaagtgagaaattgaggattaattgat 15007779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 12902338 - 12902178
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-att 149  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||  | |||||||  ||| ||||||||| ||||||||||||||||  ||    
T  12902338 gctgcgattttgatttataaggtaagggtgagactagcattcaattctattaagctatataattcggatggttgtatttgacaagtgtaggattgatttt 12902239  T
Q  150 agagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||| |||||| ||||    
T  12902238 agagaa-ttggagaattagggttaaggtgagaagttgaggattaattgatgtagaattgtta 12902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 16218918 - 16219061
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |   ||  ||||||||| |||||||||||||||||||||||||||||| || ||    
T  16218918 taaggtaagggtgagactagcattcaattctattattctatataactcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaacta 16219017  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  16219018 gggttaatgagagaaattgaggattaattgatgtagaatggtta 16219061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 9388865 - 9389029
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  || | ||||||||||||||||||||||||||||||||||||| | ||| |||    
T  9388865 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaattcttaaggtaagggtgagactagcattcaattctattaatctatatgatt 9388964  T
Q  115 ttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaattagggttaaagtga 179  Q
     |||| |||||||||| |||| |||||||| || ||||||||||| |||||||| |||||||||||    
T  9388965 ctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatta-ggttaaagtga 9389029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 22073836 - 22073708
Alignment:
Q  68 taaggtaagggtgagactagcatt-caattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||| |  | |||||||||||||  |||| | | |||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  22073836 taaggtaagggtgagactaactctgcaattctattaatcggtatgactctgatagttataattaacaagtgtaggattgaattagagaagttggaaaatt 22073737  T
Q  167 agggttaaagtgagaaattgaggattaat 195  Q
    |||||||| | ||||||||||||||||||    
T  22073736 agggttaatgagagaaattgaggattaat 22073708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 16057246 - 16057119
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | ||||||||||||  | ||||||| ||||  ||||||||| |||||||||||||| ||||||||||||||| |||||    
T  16057246 taaggtaagggtgagactaacttacaattctattaagctatataattctgatgattgtatttagcaagtgtaggattggattagagaagttggaaaatta 16057147  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| | |||||| |||||||||    
T  16057146 gggttaaagagtgaaatttaggattaat 16057119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 47832727 - 47832600
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||| ||||||| | ||||| |   ||  ||||||||| ||||| |||||||||||||||||||||||| |||||    
T  47832727 taaggtaagggtgagactaacattcaattttattaatctatataactcatatgattgtatttagcaagtataggattgaattagagaagttggaaaatta 47832628  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||| | ||||||||||||||||||    
T  47832627 gggttaatgagagaaattgaggattaat 47832600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 15440302 - 15440122
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    ||||||||  ||||||||||||| || | |||||| ||||  ||||  ||   ||||||||||||||||||||||||||||| ||||||  | ||| |||    
T  15440302 gagaaaaagtcaagagaagggaggaagacctagagagctgcaatttcaatttctaaggtaagggtgagactagcattcaattttattaacctatatgatt 15440203  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
       ||  ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| | | ||||||||||||||||    
T  15440202 catatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattaggattaatgagggaaattgaggattaat 15440122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 3563555 - 3563671
Alignment:
Q  58 ttttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagt 157  Q
    |||||||| |||||||||||||||||||| | | ||||||||||||| | | || || ||||  |  |||||| ||||||||||||||||||||||||||    
T  3563555 ttttgatctataaggtaagggtgagactaacttacaattctattaatctatttatttctgatgatcatatttagcaagtgtaggattgaattagagaagt 3563654  T
Q  158 tggagaattagggttaa 174  Q
     ||||||||||||||||    
T  3563655 cggagaattagggttaa 3563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 14037169 - 14037040
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| ||  |||||||||    
T  14037169 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtatttaacaagtgtaggattagttttaga-aaaatggagaatt 14037072  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | |||||||||||| |||||| |||||||||||    
T  14037071 a-ggttaaagtgaggaattgatgattaattgat 14037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 14347199 - 14347070
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| ||  |||||||||    
T  14347199 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtatttaacaagtgtaggattagttttaga-aaaatggagaatt 14347102  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | |||||||||||| |||||| |||||||||||    
T  14347101 a-ggttaaagtgaggaattgatgattaattgat 14347070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 15141179 - 15141358
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||||||||||||||||||||| | ||||||||||  |||||| | |   ||||||||||||||||||| | |  |||||||||||  | | ||||    
T  15141179 gagaaaaaaccaagagaagggagaaaga-ctagagtgctacgattttcactttctaaggtaagggtgagactaacttataattctattaagctatgtaat 15141277  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 194  Q
    | ||||  |  |||||| ||||||||||||||||||| |||||||||| || ||||||||| | |||||||||| ||||||    
T  15141278 tctgatgatcatatttagcaagtgtaggattgaattaaagaagttggaaaactagggttaatgagagaaattgatgattaa 15141358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 14045741 - 14045612
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    |||||||| |||||||||||||||||||||||||||  | | ||||| |||| |||||| ||||||||||||||||| |  ||||| || ||||||||||    
T  14045741 taaggtaaaggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtacttaacaagtgtaggattagttttaga-aaattggagaatt 14045644  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | |||||||||||| |||||| |||||||||||    
T  14045643 a-ggttaaagtgaggaattgatgattaattgat 14045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 14355771 - 14355642
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    |||||||| |||||||||||||||||||||||||||  | | ||||| |||| |||||| ||||||||||||||||| |  ||||| || ||||||||||    
T  14355771 taaggtaaaggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtacttaacaagtgtaggattagttttaga-aaattggagaatt 14355674  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | |||||||||||| |||||| |||||||||||    
T  14355673 a-ggttaaagtgaggaattgatgattaattgat 14355642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 16324921 - 16324793
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | || || ||||  ||  ||||||||||||||||||| | ||||||||||||||||||||    
T  16324921 taaggtaagggtgagactagcattcaatcttattaag-tctgtacttctgatgatta-atttaacaagtgtaggattaatttagagaagttggagaatta 16324824  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
     |||||||||||| |||||| |||||||||||    
T  16324823 -ggttaaagtgaggaattgatgattaattgat 16324793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 15117439 - 15117311
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | || || ||||  ||  ||||||||||||||||||| | ||||||||||||||||||||    
T  15117439 taaggtaagggtgagactagcattcaatcttattaag-tctgtacttctgatgatta-atttaacaagtgtaggattaatttagagaagttggagaatta 15117342  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
     |||||||||||| |||| | |||||||||||    
T  15117341 -ggttaaagtgaggaatttatgattaattgat 15117311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 16496345 - 16496215
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    |||| |||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  16496345 taagataagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 16496248  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||| ||||||||||   |||||||||||    
T  16496247 agggttaaggtgagaaatttgagattaattgat 16496215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 18304700 - 18304573
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| || |    
T  18304700 taaggtaagggtgagactagcatacaattctattaat-tctgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaact 18304602  T
Q  167 agggttaaagtgaga-aattgaggattaa 194  Q
    |||||||| | |||| |||||| ||||||    
T  18304601 agggttaatgagagagaattgatgattaa 18304573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 48274606 - 48274526
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  |||||||||||||   |||||||||||||||||||| ||||||||    
T  48274606 gagaaaaagccaagagaagggagaaagacctagaaagctgtgattttgagttataaggtaagggtgagactaacattcaat 48274526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 15113913 - 15113785
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | || || ||||  ||  |||||||||||||| |||| | ||| ||||||||||||||||    
T  15113913 taaggtaagggtgagactagcattcaatcttattaag-tctgtacttctgatgatta-atttaacaagtgtatgattaatttaaagaagttggagaatta 15113816  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
     |||||||||||| |||||| |||||||||||    
T  15113815 -ggttaaagtgaggaattgatgattaattgat 15113785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 9176835 - 9176965
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||| ||||||  | | ||||| ||||| ||  ||||||||||||||||||| |  |||||||| || ||| |||    
T  9176835 taaggtaagggtgagactagcattcaattttattaa-gtctgtaattctgataattaaatttaacaagtgtaggattagttttagagaa-tttgaggatt 9176932  T
Q  167 agggttaa-agtgagaaattgaggattaattgat 199  Q
    |||||||| |||||| |||||| |||||||||||    
T  9176933 agggttaagagtgag-aattgatgattaattgat 9176965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 1867233 - 1867362
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||  ||||||| ||||||||  ||||||  | | ||||| ||||||||||||||||||||||||||||| |  ||||| || |||||||||     
T  1867233 taaggtaaggacgagactaacattcaatcttattaag-tctgtaattctgatagttgtatttaacaagtgtaggattagttttagacaa-ttggagaatc 1867330  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | |||||||||||| |||||| |||||||||||    
T  1867331 a-ggttaaagtgaggaattgatgattaattgat 1867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 9750751 - 9750878
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||| ||| ||||||||||||| | | |||||    | |||||| |||||||| ||||| |||| ||||||||||||||| || |    
T  9750751 taaggtaagggtgagactaccatacaattctattaat-tctgtaattcaattggttgtaattaacaagttgtagaattggattagagaagttggaaaact 9750849  T
Q  167 agggttaaagtgaga-aattgaggattaa 194  Q
    |||||||| | |||| |||||| ||||||    
T  9750850 agggttaatgagagagaattgatgattaa 9750878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 5294567 - 5294606
Alignment:
Q  133 aagtgtaggattgaattagagaagttggagaattagggtta 173  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5294567 aagtgtaggattgaattagagaagttgg-gaattagggtta 5294606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 5295740 - 5295779
Alignment:
Q  133 aagtgtaggattgaattagagaagttggagaattagggtta 173  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5295740 aagtgtaggattgaattagagaagttgg-gaattagggtta 5295779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 5296913 - 5296952
Alignment:
Q  133 aagtgtaggattgaattagagaagttggagaattagggtta 173  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5296913 aagtgtaggattgaattagagaagttgg-gaattagggtta 5296952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 9944957 - 9945037
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||  ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  9944957 gagaaaaggccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 9945037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 14317463 - 14317543
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||| ||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  14317463 gagaaaaagccaagagaatggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 14317543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 17180476 - 17180556
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||| |  | | | ||||||||||| ||||||||    ||||||||||||||||||||||||||||    
T  17180476 gagaaaaagccaagagaagagcaagagacctagagtgctgcgattttgagtattaaggtaagggtgagactagcattcaat 17180556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26355173 - 26355221
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  26355173 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 26355221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26357625 - 26357673
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  26357625 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 26357673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 17016597 - 17016632
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaa 103  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17016597 taaggtaagggtgagactagcattcaattctcttaa 17016632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 17061130 - 17061201
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  17061130 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 17061201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 44117455 - 44117384
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  44117455 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 44117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 20219479 - 20219524
Alignment:
Q  160 gagaattagggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  20219479 gagaattagg-ttaaagtgagaaattgatgattaattgatgtagaat 20219524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 28504476 - 28504565
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||| |||||||| |  |||| ||||||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  28504476 gagaaaaagccaagaggagggagaagac-ctaggagtgctgcgattttcatctataaggtaagggtgagactaactttgcaattctattaa 28504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 44015147 - 44015058
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||||||||||||||||| |  | | | ||||||||||| ||||||||    ||||||||||||||||||| | || ||||||||||||    
T  44015147 gagaaaaaaccaagagaagagcaagagacctagagtgctgcgattttgagtattaaggtaagggtgagactaactttgcaattctattaa 44015058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 457292 - 457244
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  457292 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 11392495 - 11392543
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  11392495 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 11392543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 14948312 - 14948360
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14948312 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14948360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 15375906 - 15375954
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  15375906 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 15375954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 16233492 - 16233444
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  16233492 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 16233444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 16411029 - 16410981
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  16411029 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 16410981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18628567 - 18628487
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| || || ||||||||    
T  18628567 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgggaataacattcaat 18628487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18641273 - 18641193
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| || || ||||||||    
T  18641273 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgggaataacattcaat 18641193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 20384316 - 20384364
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  20384316 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 20384364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 24703193 - 24703145
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  24703193 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 24703145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 24705640 - 24705592
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  24705640 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 24705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 27217830 - 27217782
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  27217830 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 27217782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 38897496 - 38897572
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt 91  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||| ||||||||||| ||||    
T  38897496 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaggggtgagactaacatt 38897572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 26844 - 26987
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  26844 taaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtaagattaaattagagaagttggagaatta 26943  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||| |||||||||||||||||||||||||  |||||||||||    
T  26944 gggtttaagtgagaaattgaggattaattgacgtagaatggtta 26987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 13699 - 13895
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| ||||||||||| ||||  |  ||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||| | ||| |||    
T  13699 gagaaaaagccaagagaaggcagaagcacttagagagctgcgattttcattgttaaggtaagggtgagactagcattcaattctattaatctatatgatt 13798  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
     ||||  || |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  13799 ctgatgattttatttagcaagtgtaggattgaattagagaagttggagaattagggtttaagagagaaattgaggattaattgatgtagaatggtta 13895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 20499610 - 20499414
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| || | | | | |||| ||||||||||| |    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  20499610 gagaaaaagccaagagaagagaaagagaccaagagagctgtgattttcaattctaaggtaagggtgagactagcattcaattctattaatctatataatt 20499511  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
     ||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  20499510 ctgatgattgtatttagcaagtgtaggattgaattagagaagttggagaattagggttaaggtgagaatttgagggttaattgatgtagaatggtta 20499414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 58 - 211
Target Start/End: Original strand, 982569 - 982722
Alignment:
Q  58 ttttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagt 157  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||   ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  982569 ttttgattcttaaggtaagggtgagactagcattcaattatattaatcaatataattctgatggttgtatttaacaagtgtaggattgaattagagaagt 982668  T
Q  158 tggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||||||||||||| ||||| ||||||||||||||| |  |||||||||||    
T  982669 tggagaattagggttaaggtgaggaattgaggattaattaacgtagaatggtta 982722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 21287140 - 21287013
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  21287140 taaggtaagggtgagactagcattcaattctattaatcagtatgattatgatagttataattaacaagtgtaggattgaattagagaagttggaaaatta 21287041  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| ||||||||||||||||||    
T  21287040 gggttaaagagagaaattgaggattaat 21287013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 38854400 - 38854592
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| ||||||||||| ||||| | |||||  |||| |||||| ||   ||||||||||||||||||||||||||||||||||| | | |||||||    
T  38854400 gagaaaaagccaagagaaggaagaaagacctagaaagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattattctatataatt 38854499  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 207  Q
       ||  ||||||||| |||||||| ||||||||||||||||||||| || ||||||||| | ||| ||||||| |||||||||| |||||||    
T  38854500 catatgattgtatttagcaagtgtaagattgaattagagaagttggaaaactagggttaatgagaggaattgagtattaattgatgtagaatg 38854592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 13507232 - 13507362
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||| ||||||||||||||||||||||||||||||    
T  13507232 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtataggattgaattagagaagttggagaatta 13507330  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||||||||||||||||||    
T  13507331 gggttaaagtgagaaattgaggattaattgat 13507362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 13596764 - 13596894
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||| ||||||||||||||||||||||||||||||    
T  13596764 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtataggattgaattagagaagttggagaatta 13596862  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||||||||||||||||||    
T  13596863 gggttaaagtgagaaattgaggattaattgat 13596894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 7464904 - 7465031
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||| ||||||  | ||||||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  7464904 taaggtaagggtgagactaacattcaattttattaacctatataattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 7465003  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||| | ||||||||||| ||||||    
T  7465004 gggttaatgagagaaattgagaattaat 7465031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 17266144 - 17266280
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||  |||||| || | ||||| |||| |||||||||||||||||||||||||  |||||||||||||| |||||    
T  17266144 taaggtaagggtgagactaacattcaatcttattaa-atctgtaattctgatggttgtatttaacaagtgtaggattgttttagagaagttgga-aatta 17266241  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    |||||||||||||||||||| |||| |||||| ||||||    
T  17266242 gggttaaagtgagaaattgatgatttattgatgtagaat 17266280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 6521304 - 6521144
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||||||  | ||| |||   ||  ||||||||| |||||||||||||||||||    
T  6521304 gctgcgattttgattattaaggtaagggtgagactagcattcaattctattaacctatatgattcatatgattgtatttagcaagtgtaggattgaatta 6521205  T
Q  151 gagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    || |||||||| || ||||||||| |  || |||||||||||||||||| |||||||||||    
T  6521204 gaaaagttggaaaactagggttaatgaaaggaattgaggattaattgatgtagaatggtta 6521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 21697367 - 21697493
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 118  Q
    |||||||||||||||||||||| | |||||| ||||  ||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  21697367 aaaaaccaagagaagggagaaacacctagagagctgccatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 21697466  T
Q  119 tagttgtatttaacaagtgtaggattg 145  Q
    |  || |||||||||||||||||||||    
T  21697467 tgattttatttaacaagtgtaggattg 21697493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 17611295 - 17611399
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||||| ||||  || |||||| |||||||||||||||||||||||||||||| |||||    
T  17611295 taaggtaaggttgagactagcattcaattatattaatctatataattctgatgattttatttagcaagtgtaggattgaattagagaagttgga-aatta 17611393  T
Q  168 gggtta 173  Q
    ||||||    
T  17611394 gggtta 17611399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 22966906 - 22966829
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattg 145  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || |||||||||||||||||||||    
T  22966906 taaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttaacaagtgtaggattg 22966829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 28648222 - 28648381
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| ||||||||||||| ||| | ||||   |||| |||||| |||  |||||||||||||||||||| | | ||||||||||||| | |||| |    
T  28648222 gagaaaaagccaagagaaggga-aaagacctaggaagctgcgattttcatcttataaggtaagggtgagactaacttacaattctattaatctatatact 28648320  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 174  Q
    | ||||  |  |||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  28648321 tctgatgatcatatttagcaagtgtatgattgaattagagaagtcggagaattagggttaa 28648381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 14102352 - 14102480
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||| | |||| |||||||||||||||    
T  14102352 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatta-atttaacaagtgtaggattaatttagcgaagttggagaatta 14102449  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
     |||||||||||| |||||| |||||||||||    
T  14102450 -ggttaaagtgaggaattgatgattaattgat 14102480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 15071423 - 15071302
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga 146  Q
    |||||||| ||||||||   |||||||||||||||||||| | | ||||||||||||| |  |||||| ||||  ||| ||||| |||||||| ||||||    
T  15071423 gagtgctgcgattttgagttataaggtaagggtgagactaacttacaattctattaatctaaataattctgatgattgcatttagcaagtgtacgattga 15071324  T
Q  147 attagagaagttggagaattag 168  Q
    |||||| | |||||||||||||    
T  15071323 attagaaaggttggagaattag 15071302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 5609843 - 5609954
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| ||| |||| |||||||||| |||| ||||| || || ||||||||||| || ||||    
T  5609843 taaggtaagggtgagactagcattcaattttattaatctatatgattctgatggttgtatttagcaagagtagggttggatttagagaagtttgaaaatt 5609942  T
Q  167 agggttaaagtga 179  Q
    | |||||||||||    
T  5609943 a-ggttaaagtga 5609954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 22627672 - 22627548
Alignment:
Q  51 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 149  Q
    ||||||||||| |||| |||||||||||||| ||||| | | || || ||||||| | ||||||| ||||  |  |||||| ||||| ||||||||||||    
T  22627672 gctgtgattttcatcctataaggtaagggtgggactaacttacagttttattaatctatataattctgatgatcatatttagcaagtataggattgaatt 22627573  T
Q  150 agagaagttggagaattagggttaa 174  Q
    |||||||| ||||||||||||||||    
T  22627572 agagaagtcggagaattagggttaa 22627548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 19936187 - 19936275
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 103  Q
    |||||||| ||||||||||||||||| | ||||   |||| |||||| ||   ||||||||||||||||||||||||||||||||||||    
T  19936187 gagaaaaagccaagagaagggagaaagacctaggaagctgcgatttttattattaaggtaagggtgagactagcattcaattctattaa 19936275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 17438664 - 17438794
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagaga-agttggagaat 165  Q
    |||||||||| |||||||||||||||||||||||||  | ||| ||| |||| || |||||||||||| ||||||||| | || | || | || ||||||    
T  17438664 taaggtaaggttgagactagcattcaattctattaa-gtctatgattctgatggtcgtatttaacaagttgtaggatt-agtttgtgagaatttgagaat 17438761  T
Q  166 tagggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||||||||||||||||| |||||||||||    
T  17438762 ta-ggttaaagtgagaaattgatgattaattgat 17438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 19154012 - 19154142
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 165  Q
    |||||||| |||| ||||||||||||||||||||||  | ||| ||| |||||||||||||||||| | ||||||||| |  || ||||| || || |||    
T  19154012 taaggtaacggtgggactagcattcaattctattaa-gtttatgattctgatagttgtatttaacaggttgtaggattagtttttgagaa-tttgaaaat 19154109  T
Q  166 tagggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||||||||||||||||| |||||||||||    
T  19154110 ta-ggttaaagtgagaaattgatgattaattgat 19154142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 19800629 - 19800756
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 166  Q
    ||||||||||||||||||| ||||||||||||||||| |   |||||    | |||||| |||||||||||||||||||  |||||||| || |||||||    
T  19800629 taaggtaagggtgagactaacattcaattctattaat-tccgtaattcaattggttgtaattaacaagtgtaggattgattttagagaa-tttgagaatt 19800726  T
Q  167 agggttaaagtga-gaaattgaggattaat 195  Q
    |||||||||| || |||||||| |||||||    
T  19800727 agggttaaagagaggaaattgatgattaat 19800756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 22365606 - 22365477
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||||| || |||||| ||| ||||||    
T  22365606 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtaggattgattttagagaatttg-agaatt 22365509  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | | ||||||||||||||||  |||||||||||    
T  22365508 aag-ttaaagtgagaaattggtgattaattgat 22365477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 40492028 - 40492142
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||||||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  40492028 taaggtaagggtgagactagcattcaatcttattaa-gtctgtaattttgatgattaaatttaacaagtgtaggattaattttagagaa-tttgagaatt 40492125  T
Q  167 agggttaa-agtgagaa 182  Q
    |||||||| ||||||||    
T  40492126 agggttaagagtgagaa 40492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 23407354 - 23407266
Alignment:
Q  16 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||||| ||||||||||||||||| | |||||| |||| |||||| |||  |||||||||||||||||||| | || ||||||||||||    
T  23407354 agaaaaagccaagagaagggagaaagacctagag-gctgcgattttcatcttataaggtaagggtgagactaactttgcaattctattaa 23407266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 22002724 - 22002676
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  22002724 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 22002676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 20532536 - 20532571
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaa 103  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20532536 taaggtaagggtgagactaacattcaattctattaa 20532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 39834544 - 39834499
Alignment:
Q  153 gaagttggagaattagggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  39834544 gaagttggagaattagg-ttaaagtgaggaattgatgattaattgat 39834499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 22526478 - 22526433
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaatt 96  Q
    |||| |||||||||  |||||||||||||||||||| |||||||||    
T  22526478 gctgcgattttgatttataaggtaagggtgagactaacattcaatt 22526433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 1326392 - 1326472
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||  | |||||| ||||  ||||| ||   ||||||||||||| ||||| ||||||||    
T  1326392 gagaaaaagccaagagaagggagaagcacctagagagctgcaattttcattgttaaggtaagggtgggactaacattcaat 1326472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 1485371 - 1485323
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  1485371 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 1485323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 2418003 - 2418031
Alignment:
Q  68 taaggtaagggtgagactagcattcaatt 96  Q
    |||||||||||||||||||||||||||||    
T  2418003 taaggtaagggtgagactagcattcaatt 2418031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 4484249 - 4484201
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  4484249 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 4484201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 5852486 - 5852534
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  5852486 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 5852534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 14408637 - 14408685
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14408637 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14408685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 14824745 - 14824697
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14824745 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 20045356 - 20045436
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| |  ||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  20045356 gagaaaaagccaagagaagggagaaagacttagaaagcggcgattttgaattataaggtaagggtgggactaacattcaat 20045436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 28398552 - 28398512
Alignment:
Q  56 gattttgatccataaggtaagggtgagactagcattcaatt 96  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  28398552 gattttgaatcataaggtaagggtgagactaacattcaatt 28398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 12287344 - 12287491
Alignment:
Q  58 ttttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagt 157  Q
    ||||||| | ||||||||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  12287344 ttttgattcttaaggtaagggtgagactgacattcaattctattaatctgtataattctgatggttgtatttaacaagtgtatgattgaattagagaagt 12287443  T
Q  158 tggagaattagggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  12287444 tggagaattagagttaaagagagaaattgaggattaattgatgtagaa 12287491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 52242365 - 52242545
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| || | ||| |||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||| ||||| |||    
T  52242365 gagaaaaagccaagagaagagaaagaaacctagagagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattaatctgtatgatt 52242464  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
     |||| ||| || |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  52242465 ctgatggttataattaacaagtgtatgattgaattagagaagttggaaaattagggttaaagagagaaattgaggattaat 52242545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 46643788 - 46643652
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  46643788 taaggtatgggtgagactagcattcaattctattaaactgtatgattttgatagttataattaacaagtgtaggattgaattagagaaattggagaatta 46643689  T
Q  168 gggttaaagtgagaaattgaggattaattgatataga 204  Q
    ||||| ||| |||||||||||||||||||||| ||||    
T  46643688 gggtttaagagagaaattgaggattaattgatgtaga 46643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 11023 - 11166
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  11023 taaggtaagggtgagactagcattcaattgtattaatctatataattctgatgattgtatttagcaagtgtaggattgaattacagaagttggagaatta 11122  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||    
T  11123 gggtttaagagagaaattgaggattaattgatgtagaacggtta 11166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 15100300 - 15100104
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattt-tgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||||||| || | |||||| |||| ||||| |||| | ||||||||||||||| |||||| |||||| |||||||  |||| ||    
T  15100300 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttctgattc-taaggtaagggtgaggctagcaatcaattttattaatcggtatgat 15100202  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    | |||| |||  |||||||| ||||||||||||||||||| ||||||| || ||||||||| | |  ||||||||||||||||||| |||||||||||    
T  15100201 tctgatggttaaatttaacatgtgtaggattgaattagaggagttggaaaactagggttaatgaggaaaattgaggattaattgatgtagaatggtta 15100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 39705433 - 39705614
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctaga-gtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    ||||||||||||||||||| || |||   ||||| | |||| |||||||||   |||||||||||||||||||||||||| ||||||||| || ||  ||    
T  39705433 gagaaaaaaccaagagaagagaaaaagtcctagaagagctgcgattttgattattaaggtaagggtgagactagcattcatttctattaacatatacgat 39705532  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    |   ||  ||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  39705533 tcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattagggttaatgagagaaattgagaattaat 39705614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 43197840 - 43197967
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |   ||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  43197840 taaggtaagggtgagactagcattcaattctattattctatataactcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 43197939  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    |||||||   ||||||||||||||||||    
T  43197940 gggttaataagagaaattgaggattaat 43197967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 15374386 - 15374280
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  15374386 taaggtaagggtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 15374288  T
Q  168 gggttaaa 175  Q
    ||||||||    
T  15374287 gggttaaa 15374280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 23802354 - 23802433
Alignment:
Q  16 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23802354 agaaaaagccaagagaagggagaaaaacctagagtgctgcgattttgatccataaggtaagggtgagactaacattcaat 23802433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 53081303 - 53081444
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  |||||||||||||| |||| | |||||||||||||| |||||    
T  53081303 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtatgattaatttagagaagttgga-aatta 53081400  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||    
T  53081401 gggttaaagtgagaaattgatgattaattgatgtagaattgtta 53081444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 3838223 - 3838097
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 118  Q
    |||| ||||||||||||||||| | |||||| | || |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  3838223 aaaagccaagagaagggagaaacacctagagagttgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 3838124  T
Q  119 tagttgtatttaacaagtgtaggattg 145  Q
    |  || |||||||||||||||||||||    
T  3838123 tgattttatttaacaagtgtaggattg 3838097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 15368585 - 15368481
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  15368585 taaggtaagggtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 15368487  T
Q  168 gggtta 173  Q
    ||||||    
T  15368486 gggtta 15368481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 15372094 - 15371990
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  15372094 taaggtaagggtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 15371996  T
Q  168 gggtta 173  Q
    ||||||    
T  15371995 gggtta 15371990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 20150970 - 20150844
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 118  Q
    |||| ||||||||||||||||    |||||| |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  20150970 aaaagccaagagaagggagaaccccctagagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 20150871  T
Q  119 tagttgtatttaacaagtgtaggattg 145  Q
    |  || |||||||||||||||||||||    
T  20150870 tgattttatttaacaagtgtaggattg 20150844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 16224434 - 16224330
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||| ||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  16224434 taaggtaagagtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 16224336  T
Q  168 gggtta 173  Q
    ||||||    
T  16224335 gggtta 16224330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 15191235 - 15191124
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    |||||||||||| |||||||||||||||||||||||| | ||| ||| |||| |||||||||| |||| |||||||| || ||||||||||| |||||||    
T  15191235 taaggtaagggtaagactagcattcaattctattaatctatatgattctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatt 15191136  T
Q  167 agggttaaagtga 179  Q
    | |||||||||||    
T  15191135 a-ggttaaagtga 15191124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 15464182 - 15464268
Alignment:
Q  119 tagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    |||||||||||||||| ||||||||| ||||||| ||||| || ||||||||||||||  ||||||||||||||||||||| |||||    
T  15464182 tagttgtatttaacaaatgtaggattaaattagaaaagtttgaaaattagggttaaagatagaaattgaggattaattgatgtagaa 15464268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 16376707 - 16376829
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||| |||||||||||||| || || | | ||||| ||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  16376707 gctgcgattttgatctataaggtaagggtgggagtaacttacaatt-tattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 16376805  T
Q  151 gagaagttggagaattagggttaa 174  Q
    ||||||| ||||||||||||||||    
T  16376806 gagaagtcggagaattagggttaa 16376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 15867817 - 15868000
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||| ||||| ||   |||||| |||| |||||  || | |||||||||||||||||||||||||||||||| |||| | |||||||    
T  15867817 gagaaaaagccaagagaggggaggaaggcctagagagctgcgatttcaattcttaaggtaagggtgagactagcattcaattctaataat-tctataatt 15867915  T
Q  115 ttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 199  Q
          |||||| ||||||||||| |||||||  |||||||| || ||||||||||||||||||||| ||||   |||||||||||    
T  15867916 caatcggttgtaattaacaagtgttggattgattttagagaa-tttgagaattagggttaaagtgaggaatttgagattaattgat 15868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 32852370 - 32852240
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||      |||||| |||||||||||| |||| |  |||||||| || |||||||    
T  32852370 taaggtaagggtgagactagcattcaattctattaat-tctgtaattcaatcggttgtaattaacaagtgtatgattggttttagagaa-tttgagaatt 32852273  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||||||||||||||  ||||||||||||    
T  32852272 agagttaaagtgagaaatttgggattaattgat 32852240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 54797833 - 54797913
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || ||||||||||   |||||||||||||||||||| ||||||||    
T  54797833 gagaaaaagccaagagaagggagaaagacctagaaagcggtgattttgagttataaggtaagggtgagactaacattcaat 54797913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 6191408 - 6191334
Alignment:
Q  12 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    ||||||||||||||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  6191408 agagagaaaaaaccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 6191334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 14969974 - 14970054
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  14969974 gagaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacattcaat 14970054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 44103182 - 44103111
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||| | |||||| |||| |||||| ||   |||||||||||||||||||    
T  44103182 gagaaaaagccaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgagacta 44103111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 21817874 - 21817960
Alignment:
Q  18 aaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||| ||||||||||||||||| | |||||| |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  21817874 aaaaagccaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 21817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 22637406 - 22637317
Alignment:
Q  16 agaaaaaaccaagagaagggagaaaaatctaga-gtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||||| ||||||||||||||||  | | ||| | |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  22637406 agaaaaagccaagagaagggagaaccaccaagaagggctgcgattttgatctataaggtaagggtgagactaactttccaattctattaa 22637317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 7640379 - 7640427
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  7640379 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 7640427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 18238773 - 18238853
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||| ||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  18238773 gagaaaaagccaagagaatggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 18238853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 44616260 - 44616212
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  44616260 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 44616212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 50221531 - 50221579
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  50221531 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 50221579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 17334249 - 17334214
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaa 103  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17334249 taaggtaagggtgagactagcattcaattctcttaa 17334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 14039593 - 14039503
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| |||||||||| |  ||| | |||| || |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  14039593 gagaaaaagccaagagaagagcaaaagacctaggagagctgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 14039503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 16597588 - 16597499
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||| |||||||| |  |||| ||||||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  16597588 gagaaaaagccaagaggagggagaagac-ctaggagtgctgcgattttcatctataaggtaagggtgagactaaccttgcaattctattaa 16597499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 3097546 - 3097493
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagc-attcaattctattaa 103  Q
    |||| |||||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  3097546 gctgcgattttcatcaataaggtaagggtgagactagcttttcaattctattaa 3097493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 7799598 - 7799509
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||| |||||| || |||||  |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  7799598 gagaaaaagccaagagaatggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 7799509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 1836713 - 1836761
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  1836713 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 1836761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 12032964 - 12033012
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  12032964 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 12033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 14717913 - 14717961
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14717913 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14717961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 15117545 - 15117593
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  15117545 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 15117593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 19617343 - 19617422
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||| | | |||||  ||||||||||| ||   ||||||||||||| ||||| ||||||||    
T  19617343 gagaaaaagccaagagaagggagagagacctagaa-gctgtgattttcattgttaaggtaagggtgggactaacattcaat 19617422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 26790319 - 26790279
Alignment:
Q  56 gattttgatccataaggtaagggtgagactagcattcaatt 96  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  26790319 gattttgaatcataaggtaagggtgagactaacattcaatt 26790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 29268325 - 29268277
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29268325 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29268277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 3854 - 4047
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| ||||||||||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||  | ||| |||    
T  3854 gagaaaaagccaagagaagggagaaagacctagagtgttgcgattttgatctataaggtaagggtgagactagcattcaattctattaacctatatgatt 3953  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatgg 208  Q
       ||  |||||||||||||||||||||||||||||||||||||||| || ||||||| | | ||| |||||||||||||||||| || |||||    
T  3954 catatgattgtatttaacaagtgtaggattgaattagagaagttggaaaactagggttcatgagaggaattgaggattaattgatgtaaaatgg 4047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 20026072 - 20026215
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| ||||  ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  20026072 taaggtaagggtgagactagcattcaattctattaatctatatgattctgatgattgtatttagcaagtgtagaattgaattagagaagttggagaatta 20026171  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||    
T  20026172 gggttaaggtgagaatttgaggattaattgatgtagaatggtta 20026215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 26011183 - 26011363
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| || |   | |||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||| ||||| |||    
T  26011183 gagaaaaatccaagagaagagaaagtgacctagagagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattaatctgtatgatt 26011282  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
     |||||||| || |||||||||||||||||||||||||||||||| | ||||||| || | | ||||||||||||||||||    
T  26011283 ctgatagttataattaacaagtgtaggattgaattagagaagttgaaaaattaggatttatgagagaaattgaggattaat 26011363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 22145021 - 22144841
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttg-atccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||| |||||  | |||||| |||| ||||||  || | ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  22145021 gagaaaaagccaagagaagagagaagcacctagagagctgcgattttttattc-taaggtaagggtgagactagcattcaattctattaatctgtatgat 22144923  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    | |||||||| || |||||| ||||| |||| |||||||||||||||| |||||||||| ||| ||||||||||| ||||||    
T  22144922 tctgatagttataattaacacgtgtacgattaaattagagaagttggaaaattagggtttaagagagaaattgagaattaat 22144841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 22177347 - 22177488
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||| | |||||||||||||| |||||    
T  22177347 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtaggattaatttagagaagttgga-aatta 22177444  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    || ||||||||||||||||| ||||||||||| |||||| ||||    
T  22177445 ggtttaaagtgagaaattgatgattaattgatgtagaattgtta 22177488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 21328724 - 21328849
Alignment:
Q  70 aggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagg 169  Q
    |||||| ||||||||||||||||||||||||| |  ||||||| |   ||  ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  21328724 aggtaaaggtgagactagcattcaattctatttagttgtataactcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattagg 21328823  T
Q  170 gttaaagtgagaaattgaggattaat 195  Q
     |||| | ||||||||||| ||||||    
T  21328824 tttaatgagagaaattgagaattaat 21328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 24068364 - 24068247
Alignment:
Q  29 agaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatt 128  Q
    |||||||||||| | |||||| |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || ||||    
T  24068364 agaagggagaaacacctagagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatt 24068265  T
Q  129 taacaagtgtaggattga 146  Q
    ||||||||||||||||||    
T  24068264 taacaagtgtaggattga 24068247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 21740745 - 21740888
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||| |||||| || ||||  |||| ||| |||| |||  ||||||||||||||||||||||| |||| ||||||| ||  |    
T  21740745 taaggtaagggtgagactagcaatcaattttactaatcagtatgattctgatggttaaatttaacaagtgtaggattgaatgagaggagttggaaaacaa 21740844  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | |  |||||||||||||||| || |||||||||||    
T  21740845 gggttaatgaggaaaattgaggattaattaatgtagaatggtta 21740888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 5888390 - 5888487
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaa 164  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||| |||| |||||||| || ||||||||||| |||||    
T  5888390 taaggtaagggtgagactagcattcaattctattaatctatatgattttgatggttgtatttagcaagagtaggattggatttagagaagtttgagaa 5888487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 9078889 - 9078765
Alignment:
Q  51 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 149  Q
    |||| |||||| |||| |||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||| |||||||    
T  9078889 gctgcgattttcatcctataaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggtttgaatt 9078790  T
Q  150 agagaagttggagaattagggttaa 174  Q
    |||||||| ||||||||||||||||    
T  9078789 agagaagtcggagaattagggttaa 9078765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 24530107 - 24529984
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | | ||| | ||||  |  |||||  |||||||||||||||||||    
T  24530107 gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatgtaagtctgatgatcatatttggcaagtgtaggattgaatta 24530008  T
Q  151 gagaagttggagaattagggttaa 174  Q
    ||||||| ||||||||||||||||    
T  24530007 gagaagtcggagaattagggttaa 24529984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 27988105 - 27988213
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||||||||||  | | ||||| |||| |||  ||||||||||||||||||| | |||||||||| ||| |||||    
T  27988105 taaggtaagggtgagactaacattcaattctattaa-gtctgtaattctgatggttaaatttaacaagtgtaggattaatttagagaagtggga-aatta 27988202  T
Q  168 gggttaaagtg 178  Q
    |||||||||||    
T  27988203 gggttaaagtg 27988213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 36315496 - 36315366
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  36315496 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 36315399  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||| ||||||||||   |||||||||||    
T  36315398 agggttaaggtgagaaatttgagattaattgat 36315366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 21870803 - 21870929
Alignment:
Q  69 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||     ||||||| |||||||||||||||||||  |||||||| || ||||||||    
T  21870803 aaggtaagggtgagactagcattcaattctactaat-tctgtaattcaatcagttgtaattaacaagtgtaggattgattttagagaa-tttgagaatta 21870900  T
Q  168 gggttaaagtga-gaaattgaggattaat 195  Q
    ||||||||| || |||||||| |||||||    
T  21870901 gggttaaagagaggaaattgatgattaat 21870929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 21875083 - 21875209
Alignment:
Q  69 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||     ||||||| |||||||||||||||||||  |||||||| || ||||||||    
T  21875083 aaggtaagggtgagactagcattcaattctactaat-tctgtaattcaatcagttgtaattaacaagtgtaggattgattttagagaa-tttgagaatta 21875180  T
Q  168 gggttaaagtga-gaaattgaggattaat 195  Q
    ||||||||| || |||||||| |||||||    
T  21875181 gggttaaagagaggaaattgatgattaat 21875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 22958712 - 22958797
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||| ||||||||||||||||||| ||||||||||| |||||| ||   |||||||||| |||||||| | || ||||||||||||    
T  22958712 aaaagccaagagaagggagaaaaacctagagtgctgcgattttcattgttaaggtaaggttgagactaactttgcaattctattaa 22958797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 2153899 - 2153979
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||| |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  2153899 gagaaaaagccaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgggactaacattcaat 2153979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 263961 - 264009
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  263961 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 264009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 10732130 - 10732178
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  10732130 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 10732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 20765177 - 20765257
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||| ||| | |||||  || ||||||||||   ||||||||||||||||||||  |||||||    
T  20765177 gagaaaaagccaagagaagggaaaaagacctagatagcggtgattttgagttataaggtaagggtgagactaaaattcaat 20765257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 22413190 - 22413110
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | || ||| |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  22413190 gagaaaaagccaagagaagggagaaacacctggagagctgcgattttcattgttaaggtaagggtgggactaacattcaat 22413110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 39246137 - 39246057
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  39246137 gagaaaaagccaagagaagggagaaagacctagaaagccgcgattttgagttataaggtaagggtgggactaacattcaat 39246057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 20901273 - 20901353
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||||||||| ||  ||||  |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  20901273 gagaaaaagccaagagaagggagaacaacttagaaagctgcgattttcattgttaaggtaagggtgggactaacattcaat 20901353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 20909984 - 20909936
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  20909984 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 20909936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 29346950 - 29346902
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29346950 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29346902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 29349423 - 29349375
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29349423 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 29351896 - 29351848
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29351896 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29351848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 39364353 - 39364305
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  39364353 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 39364305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 13564 - 13420
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  13564 taaggtaagggtgagactagcattcaattctattaatttatataattctgatggttgtatttaacaagtgtaggattgattttagagaagttggagaatt 13465  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||| ||| |||||||||| || |||||||| |||||||||||    
T  13464 agggtttaagagagaaattgaagactaattgatgtagaatggtta 13420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 14762 - 14854
Alignment:
Q  12 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||||||||| | ||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  14762 agagagaaaaagctaagagaagggagaagcacctagagagctgcgatttttattgttaaggtaagggtgagactaactttgcaattctattaa 14854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 96; Significance: 7e-47; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 50746 - 50889
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  50746 taaggtaagggtgagactagcattcaattgtattaatctatataattctgatgattgtatttagcaagtgtaggattgaattacagaagttggagaatta 50845  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||    
T  50846 gggtttaagagagaaattgaggattaattgatgtagaacggtta 50889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 7505 - 7610
Alignment:
Q  67 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaat 165  Q
    |||||||| ||||||||||||||||||||||||||||| | | |||||    | |||||| |||||||| |||||||||| |||||| |||||||| |||    
T  7505 ataaggtatgggtgagactagcattcaattctattaat-tatgtaattcaattggttgtaattaacaagttgtaggattggattagaaaagttggaaaat 7603  T
Q  166 tagggtt 172  Q
    |||||||    
T  7604 tagggtt 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 538 - 627
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaat 104  Q
    |||||||| |||||||||||||| ||    ||||| ||||||||||  || | |||||||||||| ||||||||||||||||||||||||    
T  538 gagaaaaagccaagagaagggaggaaggcttagagagctgtgatttcaattcttaaggtaagggttagactagcattcaattctattaat 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 59886 - 60028
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||| | |||||||||||||| |||||    
T  59886 taaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aatta 59984  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
     |||||||||||||||||| |||||||||||| |||||| ||||    
T  59985 aggttaaagtgagaaattggggattaattgatgtagaattgtta 60028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 926 - 1062
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||||||||||| ||||||||||| | |||||||||||||| |||||    
T  926 taaggtaagggcgagactagcattcaattctattaagttgtataattatgatggttgtatttaacgagtgtaggattaatttagagaagttgga-aatta 1024  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    |||||||||||||||||||||||||||||||| |||||    
T  1025 gggttaaagtgagaaattgaggattaattgatgtagaa 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 20519267 - 20519463
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtg-ctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    ||||||||||||||||||| ||  || | |||||| | |||||||||  ||   ||||||||||||||||||||||||||||||||||||  ||||||||    
T  20519267 gagaaaaaaccaagagaagagaagaagacctagagaggctgtgatttcaatttctaaggtaagggtgagactagcattcaattctattaagttgtataat 20519366  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    | |||| || |||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  20519367 tctgatggtggtatctaacaagtgtaggattaatttagagaagttgga-aattagggttaaagtgagaaattgatgattaattgatgtagaattgtta 20519463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 18786012 - 18786153
Alignment:
Q  70 aggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagg 169  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |||| ||||||||||  ||||||| |||||||||||||||||||||  ||||||    
T  18786012 aggtaagggtgagactagcattcaattctattaatctatgtaattctgatggttgtatttagtaagtgtatgattgaattagagaagttggaagattagg 18786111  T
Q  170 gttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||| ||| |||||||||||||||||||||| |||||||||||    
T  18786112 gtttaagagagaaattgaggattaattgatgtagaatggtta 18786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 7680239 - 7680072
Alignment:
Q  44 ctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagga 142  Q
    ||||||||||| |||||| ||| | |||||||||| |||||||| ||||||||||||||||| | ||| ||| ||||| ||||||||| ||| |||||||    
T  7680239 ctagagtgctgcgatttttgattc-taaggtaaggatgagactaacattcaattctattaatctatatgattctgataattgtatttagcaaatgtagga 7680141  T
Q  143 ttgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||||||||||||||| |||||||||||| | || ||||||||||||||||||| |||||||||||    
T  7680140 ttgaattagagaagttggaaaattagggttaatgagaaaaattgaggattaattgatgtagaatggtta 7680072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 19672820 - 19672684
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  |||||||||||||| |||||||||||||||||||||||||||    
T  19672820 taaggtaagggtgagactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtatgattgaattagagaagttggagaatta 19672722  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    || ||||||||||||||||||||||||||||| |||||    
T  19672721 ggtttaaagtgagaaattgaggattaattgatgtagaa 19672684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 23705428 - 23705608
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||| |||||  | | |||| |||| |||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  23705428 gagaaaaagccaagagaagagagaagcaccaagagagctgcgatttttgattc-taaggtaagggtgagactagcattcaattctattaatctgtatgat 23705526  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    | |||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||| ||| ||||||||||| ||||||    
T  23705527 tctgatagttataattaacaattgtaggatggaattagagaagttggaaaattagggtttaagagagaaattgagaattaat 23705608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 22412315 - 22412449
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||| |||||||||||||||||||||||| | ||||| ||||||||| |||| || ||||||||||||||||||||| |||||||||||||||| |||||    
T  22412315 taagataagggtgagactagcattcaattatgttaatctgtataattctgatggt-gtatttaacaagtgtaggattaaattagagaagttgga-aatta 22412412  T
Q  168 gggttaaagtgagaaattgaggattaattgatataga 204  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  22412413 gggttaaagtgagaaattgatgattaattgatgtaga 22412449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 23208269 - 23208127
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||||||||| |  | | |||||||||| ||||||| |||||||||||||||| | ||||||||||| || |||||    
T  23208269 taaggtaagggtgagactagcattcaattctattcag-tctgtaattttgatggttgtatctaacaagtgtaggattaatttagagaagtt-gaaaatta 23208172  T
Q  168 gggttaaagtgag-aaattgaggattaattgatatagaatggtta 211  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  23208171 gggttaaagtgagaaaattgatgattaattgatgtagaattgtta 23208127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 25176814 - 25176634
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| |  | | | |||||||| || |||||||||| |||||||||||||||||||| ||||||||||||||||  | ||| |||    
T  25176814 gagaaaaagccaagagaagagcaagagacctagagtgttgcgattttgatcaataaggtaagggtgagactaacattcaattctattaacctatatgatt 25176715  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
       ||| ||||||||| |||||| ||||||||||||||||||||||| || || |||||| | ||||||||||| ||||||    
T  25176714 catataattgtatttagcaagtgcaggattgaattagagaagttggaaaactacggttaatgagagaaattgagaattaat 25176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 23138080 - 23137900
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||| |  | | | ||||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||  |||||||     
T  23138080 gagaaaaagccaagagaagagcaagagacctagagtgctgcgatttttgattc-taaggtaagggtgagtctagcattcaattctattaagttgtataac 23137982  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    |   ||  ||||||||| ||||||||||||||||||||||||||| || ||||||| ||||   ||||||||||| ||||||    
T  23137981 tcatatgattgtatttagcaagtgtaggattgaattagagaagtttgaaaattaggattaatcagagaaattgagaattaat 23137900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 23549870 - 23549690
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||| |  | | | ||||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||  |||||||     
T  23549870 gagaaaaagccaagagaagagcaagagacctagagtgctgcgatttttgattc-taaggtaagggtgagtctagcattcaattctattaagttgtataac 23549772  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    |   ||  ||||||||| ||||||||||||||||||||||||||| || ||||||| ||||   ||||||||||| ||||||    
T  23549771 tcatatgattgtatttagcaagtgtaggattgaattagagaagtttgaaaattaggattaatcagagaaattgagaattaat 23549690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 23792246 - 23792117
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||| ||||||||||||  ||||||  | | ||||| ||||  ||  |||||||||||||| |||| | |||||||||||||| |||||    
T  23792246 taaggtaagggtgagcctagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtatgattaatttagagaagttgga-aatta 23792149  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||| |||||||||||    
T  23792148 gggttaaagtgagaaattgatgattaattgat 23792117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 23005722 - 23005593
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||||||||  ||  |||||| |||||||||||| |  |||||||| || |||||||    
T  23005722 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattttgatgattaaatttaagaagtgtaggattagttttagagaa-tttgagaatt 23005625  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | |||||||| |||||||||| |||||||||||    
T  23005624 a-ggttaaagggagaaattgatgattaattgat 23005593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 25109840 - 25109711
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||| ||| |  |||||||| ||||||||||    
T  25109840 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtagaattagttttagagaa-ttggagaatt 25109743  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | ||| ||||||||||||||| |||||||||||    
T  25109742 a-ggtaaaagtgagaaattgatgattaattgat 25109711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 23660884 - 23660835
Alignment:
Q  125 tatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 174  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23660884 tatttagcaagtgtaggattgaattagagaagtcggagaattagggttaa 23660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 21326779 - 21326905
Alignment:
Q  68 taaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaagt-gtaggattgaattagagaagttggagaat 165  Q
    ||||||||||||||||||| | ||||| ||||||||||  |||||||| || ||||  || ||| ||||| |||||||||||||||| |||||||| ||     
T  21326779 taaggtaagggtgagactaacgattcagttctattaattcgtataattctggtagtc-taattagcaagttgtaggattgaattagaaaagttgga-aac 21326876  T
Q  166 tagggttaaagtgagaaattgaggattaa 194  Q
    ||||||||| | |||||||||| ||||||    
T  21326877 tagggttaaggagagaaattgatgattaa 21326905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 22458690 - 22458818
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||| ||||||  | | ||||| |||| | |  ||||||||||||| ||||| |  || ||||||||||||||||    
T  22458690 taaggtaagggtgagactagcattcaattttattaa-gtctgtaattctgat-gattaatttaacaagtgtgggattaatctatagaagttggagaatta 22458787  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
      ||||||||||| ||||||  ||||||||||    
T  22458788 -tgttaaagtgaggaattgataattaattgat 22458818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 27754497 - 27754408
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||  | | |||| |||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  27754497 gagaaaaagccaagagaagggagaaccaccaagagggctgcgattttcatctataaggtaagggtgagactaactttgcaattctattaa 27754408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 21317870 - 21317996
Alignment:
Q  68 taaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaat 165  Q
    ||||||||||||||||||| | ||||| ||||||||||  ||||| || || ||| | || ||| |||| ||||||||||||||||| |||||||| ||     
T  21317870 taaggtaagggtgagactaacgattcagttctattaattcgtatagttctggtag-tctaattagcaagttgtaggattgaattagaaaagttgga-aac 21317967  T
Q  166 tagggttaaagtgagaaattgaggattaa 194  Q
    ||||||||| | |||||||||| ||||||    
T  21317968 tagggttaaggagagaaattgatgattaa 21317996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22172926 - 22173006
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||| |||||  |||||||| |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  22172926 gagaaaaagccaagagaagagagaagcatctagagagctgcgattttcattgttaaggtaagggtgagactaacattcaat 22173006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 6972 - 7021
Alignment:
Q  162 gaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||||||||||  |||||| |||||||||||||||| |||||||||||    
T  6972 gaattagggttaagatgagaatttgaggattaattgatgtagaatggtta 7021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 24528825 - 24528894
Alignment:
Q  26 aagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||| |||||||||| |||||||| |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  24528825 aagaaaagggagaaacatctagagagctgcgattttcattgttaaggtaagggtgagactaacattcaat 24528894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 26506348 - 26506300
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  26506348 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 26506300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 26508826 - 26508778
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  26508826 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 26508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 27919957 - 27920005
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  27919957 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 27920005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45027167 - 45027247
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||| ||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  45027167 gagaaaaagccaagagaaggaagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 45027247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 572368 - 572320
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  572368 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 572320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 18809912 - 18809864
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  18809912 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 18809864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 23131831 - 23131783
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  23131831 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 23131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 23134298 - 23134250
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  23134298 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 23134250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 23711206 - 23711254
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  23711206 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 23711254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 32038690 - 32038738
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  32038690 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 32038738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 39683285 - 39683237
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  39683285 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 39683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 9464 - 9333
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| | ||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  9464 taaggtaagggtgagactagcattcaattctattaacctatataactctgatgattgtatttagcaagtgtaggattgaattagagaagttggagaatta 9365  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||| ||| ||||||||||||||||||    
T  9364 gggttaaagagaggaattgaggattaattgat 9333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 228389 - 228262
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||| || |||||||||||| ||||||||||||||||||||| |||||    
T  228389 taaggtaagggtgagattagcattcaattctattaatctgtatgattctgatagttataattaacaagtgtatgattgaattagagaagttggaaaatta 228290  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| ||||||||||||||||||    
T  228289 gggttaaagggagaaattgaggattaat 228262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 37250265 - 37250447
Alignment:
Q  16 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattt 115  Q
    ||||||| |||||||||||||  || | |||||| |||| |||||  ||   ||||||||||||||||||| ||||||||||||||||   ||||||||     
T  37250265 agaaaaagccaagagaagggaagaagacctagagagctgcgatttcaatttctaaggtaagggtgagactaacattcaattctattaagtagtataattc 37250364  T
Q  116 tgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 199  Q
    |||| ||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37250365 tgatggttgtatttaacaagtgtatgattaatttagagaagttgga-aattagggttaaagtgagaaattgaggattaattgat 37250447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 23275616 - 23275480
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||||||||||||||||||||||||    
T  23275616 taaggtaagggtgagactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattgaattagagaagttggagaatta 23275518  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  23275517 gggttaaagtgataaattgaggattaattgatgtagaa 23275480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 2044856 - 2044983
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  2044856 taaggtaagggtgagactaacattcaattctattaacctatatgattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 2044955  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| ||||||||||||||||||    
T  2044956 gggttaaagagagaaattgaggattaat 2044983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 2047585 - 2047712
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  2047585 taaggtaagggtgagactaacattcaattctattaacctatatgattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 2047684  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| ||||||||||||||||||    
T  2047685 gggttaaagagagaaattgaggattaat 2047712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 52522929 - 52523056
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| || |||||||||||| ||||||||||||||||||||| |||||    
T  52522929 taaggtaagggtgagactatcattcaattatattaatctgtatgattctgatagttataattaacaagtgtatgattgaattagagaagttggaaaatta 52523028  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||||| ||||||||||| ||||||    
T  52523029 gggttaaagagagaaattgagaattaat 52523056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 15471843 - 15471706
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| ||||| ||||||||| |||||||||||||| ||||||||||||||| || ||    
T  15471843 taaggtaagggtgagactagcattcaattctattaatctatatgattctgataattgtatttagcaagtgtaggattggattagagaagttggaaaacta 15471744  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    ||||||| |  || |||||||||||||||||| |||||    
T  15471743 gggttaatgaaaggaattgaggattaattgatgtagaa 15471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 1464580 - 1464776
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattt-tgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||| || |   ||||||||||||| ||||| |||| | |||||||||||||||||||||| |||||| |||||||  |||| ||    
T  1464580 gagaaaaagccaagagaagagaaagtgatctagagtgctgcgatttctgattc-taaggtaagggtgagactagcaatcaattttattaatcggtatgat 1464678  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    | |||| |||  |||||||||||||||||||||||||||| ||||||| || ||||||||| | |  ||||||||| ||||||||| |||||||||||    
T  1464679 tctgatggttaaatttaacaagtgtaggattgaattagaggagttggaaaactagggttaatgaggaaaattgagggttaattgatgtagaatggtta 1464776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 42387326 - 42387177
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 149  Q
    |||| |||||| ||| |||||||||||||||||||||| |||||||| | ||||| ||||| ||| | |||||| || ||||||||||||||||||||||    
T  42387326 gctgcgattttcatctataaggtaagggtgagactagccattcaattatgttaatctgtatgattctaatagttataattaacaagtgtaggattgaatt 42387227  T
Q  150 agagaagttggagaattagggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||| ||| ||||||||||||  ||| ||||||  ||||| |||||    
T  42387226 agagaagtcggaaaattagggttaatatgataaattggtgattacttgat 42387177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 18439506 - 18439347
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| |||||||||||||||| || |||||| |||| |||||| |||| ||||| |||||||||||||| | | ||||||||||||| | ||||||    
T  18439506 gagaaaaagccaagagaagggagaacaacctagag-gctgcgattttcatcctataagataagggtgagactaacttacaattctattaatctatataat 18439408  T
Q  114 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 174  Q
    | ||||  |  |||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  18439407 tctgatgatcatatttagcaagggtaggattgaattagagaagtcggataattagggttaa 18439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 8500383 - 8500256
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga 146  Q
    |||||||| ||||||||   |||||||||||||||||||| | | ||||||||||||| | | ||||| ||||  ||||||||| |||||||||||||||    
T  8500383 gagtgctgcgattttgagttataaggtaagggtgagactaacttacaattctattaatctatgtaattctgatgattgtatttagcaagtgtaggattga 8500284  T
Q  147 attagagaagttggagaattagggttaa 174  Q
    |||||| | |||||||||||||||||||    
T  8500283 attagaaaggttggagaattagggttaa 8500256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 40212906 - 40213029
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||| | |||||||||||||| ||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  40212906 gctgcgattttgacctataaggtaagggtgggactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 40213005  T
Q  151 gagaagttggagaattagggttaa 174  Q
    ||||||||||||||||||||||||    
T  40213006 gagaagttggagaattagggttaa 40213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 22109459 - 22109622
Alignment:
Q  46 agagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattg 145  Q
    |||| |||| |||||||||   ||||||||||||||||||| | | ||||| ||||||  | | ||||| |||||||||||||| ||||||||||||||     
T  22109459 agagagctgcgattttgatttctaaggtaagggtgagactaacttacaattatattaag-tctgtaattctgatagttgtatttgacaagtgtaggatta 22109557  T
Q  146 aattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    | ||  |||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  22109558 atttgaagaaattg-agaattagggttaaagagaggaattgaggattaattgatatagaattgtta 22109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 24339940 - 24340044
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || ||| || |||||||||||||||||||||||| |||| ||||||    
T  24339940 taaggtaagggtgagactagcattcaattctattaatctatataattatgatgattttatctagcaagtgtaggattgaattagagaaattgg-gaatta 24340038  T
Q  168 gggtta 173  Q
    ||||||    
T  24340039 gggtta 24340044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 12386381 - 12386244
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 165  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| |||||||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  12386381 taaggtaagggtgggactagcattcaattctattaa-gtctatgattttgatggttgtatttaacacgttgtaggattagtttttgagaa-tttgagaat 12386284  T
Q  166 tagggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    || ||||||||||||||||||| ||||||||||||||||||    
T  12386283 ta-ggttaaagtgagaaattgatgattaattgatatagaat 12386244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 25475569 - 25475693
Alignment:
Q  51 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 149  Q
    |||| |||||| |||| |||||||||||||||||||| | | ||||||||||||| | | ||||| ||||  |  |||||| ||||||||||||||||||    
T  25475569 gctgcgattttcatcctataaggtaagggtgagactaacttacaattctattaatctatgtaattctgatgatcatatttagcaagtgtaggattgaatt 25475668  T
Q  150 agagaagttggagaattagggttaa 174  Q
    |||||||| ||||||||||||||||    
T  25475669 agagaagtcggagaattagggttaa 25475693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 27166095 - 27165988
Alignment:
Q  67 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 166  Q
    ||||| |||| ||||||||| | | ||||||||||||| | ||||||| ||||  ||||||||| ||||||||||||||||||||| | |||||||||||    
T  27166095 ataagataagagtgagactaacttacaattctattaatctatataattctgatgattgtatttagcaagtgtaggattgaattagaaaggttggagaatt 27165996  T
Q  167 agggttaa 174  Q
    ||||||||    
T  27165995 agggttaa 27165988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 22792214 - 22792103
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| ||| |||| |||||||||| |||| ||||| || || ||||||||||| || ||||    
T  22792214 taaggtaagggtgagactagcattcaattttattaatctatatgattctgatggttgtatttagcaagagtagggttggatttagagaagtttgaaaatt 22792115  T
Q  167 agggttaaagtga 179  Q
    | |||||||||||    
T  22792114 a-ggttaaagtga 22792103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 12171293 - 12171382
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  12171293 gagaaaaaaccaagagaagggagaaagacctagagtgctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 12171382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 14502118 - 14501988
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    ||||||||||||||||||| ||||||||||||||||| | | |||||      ||||||  |||||||||||||||||  || |||||| ||| ||||||    
T  14502118 taaggtaagggtgagactaacattcaattctattaat-tctgtaattcaatcggttgtaaataacaagtgtaggattggttttagagaatttg-agaatt 14502021  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||  ||||||||||||    
T  14502020 agggttaaagtgagaaatttgggattaattgat 14501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 21838425 - 21838284
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||| |||| |  | | ||||| ||||  ||  ||||||||||||||| ||| | || ||||| |||||||||||    
T  21838425 taaggtaagggtgagactagcattcaattatattgag-tctgtaattctgatgattaaatttaacaagtgtagaattaattttagaga-gttggagaatt 21838328  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||| |||||||||| |||||| ||||||||||| |||||| ||||    
T  21838327 agg-ttaaagtgaggaattgacgattaattgatgtagaattgtta 21838284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 28195578 - 28195452
Alignment:
Q  72 gtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaattaggg 170  Q
    ||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||||||    
T  28195578 gtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaattaggg 28195481  T
Q  171 ttaaagtgagaaattgaggattaattgat 199  Q
    |||| ||||||||||   |||||||||||    
T  28195480 ttaaggtgagaaatttgagattaattgat 28195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 10557779 - 10557649
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||| ||||||||||||||||||  | | ||||| ||||  ||  ||||||||| ||||||||| |  |||||||| || |||||||    
T  10557779 taaggtaagggtgagaccagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaactgtaggattggttttagagaa-tttgagaatt 10557682  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||| ||||||||||||   |||||||||||    
T  10557681 agggttcaagtgagaaatttgagattaattgat 10557649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 12851565 - 12851692
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| |||| |||||||||| || |    
T  12851565 taaggtaagggtgagactagcatacaattctattaat-tttttaattcaattggttgtaattaacaagttgtaggattggattatagaagttggaaaact 12851663  T
Q  167 agggttaaagtgaga-aattgaggattaa 194  Q
    |||||||| | |||| |||||| ||||||    
T  12851664 agggttaatgagagagaattgatgattaa 12851692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 45798190 - 45798097
Alignment:
Q  12 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcca--taaggtaagggtgagactagcattcaattctattaat 104  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||| |||   || |  |||||||||||||||||||||||||||||||||||||    
T  45798190 agagagaaaaagccaagagaagggaggaaagcctagagagctgtgctttct-tcaaactaaggtaagggtgagactagcattcaattctattaat 45798097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 53300772 - 53300930
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||  ||||||||| ||||||| | ||||   |||| |||||||||   ||||||||| ||||||||||||||||||||||||||  | | |||||    
T  53300772 gagaaaatgccaagagaatggagaaagacctaggaagctgcgattttgattgttaaggtaagagtgagactagcattcaattctattaa-gtctgtaatt 53300870  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 174  Q
     ||||  |||||||||  || |  | |||||||||||| | |||||| ||||||||||||    
T  53300871 ctgatgattgtatttagaaaataaaagattgaattagaaaggttggaaaattagggttaa 53300930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 13443174 - 13443085
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||  | | |||| |||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  13443174 gagaaaaagccaagagaagggagaaccaccaagagggctgcgattttcatctataaggtaagggtgagactaactttgcaattctattaa 13443085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 53069848 - 53069937
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||  | |||||| ||||||||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  53069848 gagaaaaatccaagagaagggagaagcacctagagagctgtgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 53069937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 23412376 - 23412412
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaat 104  Q
    |||||||||||||||||||||||||||||||||||||    
T  23412376 taaggtaagggtgagactagcattcaattctattaat 23412412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 45219412 - 45219533
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  |||||||||| |||||||| | |||  |||||||||||||||    
T  45219412 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatta-atttaacaagagtaggattaatttaaggaagttggagaatta 45219509  T
Q  168 gggttaaagtgagaaattgaggatt 192  Q
     |||||||||||| |||||| ||||    
T  45219510 -ggttaaagtgaggaattgatgatt 45219533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45577602 - 45577682
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  45577602 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 45577682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 50243916 - 50243836
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  50243916 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagactaacattcaat 50243836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 17738232 - 17738197
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaa 103  Q
    ||||||||||||||||||||||||||||||||||||    
T  17738232 taaggtaagggtgagactagcattcaattctattaa 17738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 19039552 - 19039517
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaa 103  Q
    ||||||||||||||||||||||||||||||||||||    
T  19039552 taaggtaagggtgagactagcattcaattctattaa 19039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 14235393 - 14235331
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtattta 130  Q
    |||||||||||||||||||| ||||||||||||||  || ||| ||| ||||| |||||||||    
T  14235393 taaggtaagggtgagactagtattcaattctattatcatatatgattctgataattgtattta 14235331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 605522 - 605598
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattg 145  Q
    |||||||||||||||||||||||| |||||||||||  | ||||| | ||||  ||  ||||||||||||||||||||    
T  605522 taaggtaagggtgagactagcatttaattctattaa-ctatataactatgatgattagatttaacaagtgtaggattg 605598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 21619505 - 21619425
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| || |||| |||||||| | ||||| ||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  21619505 gagaaaaagccgagaggagggagaaga-tctaggagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 21619425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 43928058 - 43927982
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt 144  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| |||| ||||||||||||||| |||||||||    
T  43928058 taaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatggttgtatttaacaagttgtaggatt 43927982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 15978536 - 15978456
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  15978536 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgggactaacattcaat 15978456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 45606119 - 45606167
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  45606119 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 45606167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 55477461 - 55477413
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  55477461 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 55477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 45798050 - 45798011
Alignment:
Q  160 gagaattagggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  45798050 gagaattagggttaaagtgagaaatttgggattaattgat 45798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 29171797 - 29171871
Alignment:
Q  12 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    ||||||||||  |||||||||||||||| || |||||  |||| |||||| ||   |||||||||||||||||||    
T  29171797 agagagaaaacgccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagacta 29171871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 320209 - 320137
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagg 141  Q
    ||||||||||||||||||| ||||||||||| ||||  || ||||||||||| |||  || ||||| |||||||    
T  320209 taaggtaagggtgagactaacattcaattctcttaagctg-ataattttgatggttagatataacatgtgtagg 320137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 23317937 - 23318009
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagg 141  Q
    ||||||||||||||||||| ||||||||||| ||||  || |||| |||||| |||  |||||||| |||||||    
T  23317937 taaggtaagggtgagactaacattcaattctcttaagctg-ataaatttgatggttagatttaacatgtgtagg 23318009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 49388792 - 49388881
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  ||   ||||||||||||||||||| | || ||||||||||||    
T  49388792 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaatttctaaggtaagggtgagactaactttgcaattctattaa 49388881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 7780538 - 7780586
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  7780538 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 7780586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 10246915 - 10246963
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  10246915 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 10246963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 13150981 - 13151029
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  13150981 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 13151029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 13153449 - 13153497
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  13153449 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 13153497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 17464147 - 17464099
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  17464147 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 17464099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 34160295 - 34160247
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  34160295 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 34160247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 46242 - 46378
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  |||||||||||||| |||||||||||||||||||||||||||    
T  46242 taaggtaagggtgagactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaagattgaattagagaagttggagaatta 46340  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46341 gggttaaagtgagaaattgaggattaattgatgtagaa 46378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 102771 - 102931
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-att 149  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||  |||  ||    
T  102771 gctgcgattttgatttataaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtagggatgatttt 102870  T
Q  150 agagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||| | |||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  102871 agagaa-tgggagaattagggttaaggtgagaaattgatgattaattgatgtagaatggtta 102931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 905 - 1049
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| |||| |||||||||||||||||||||||| |  |||||||||||||||||||    
T  905 taaggtaagggtgagactagcattcaattttattaatctatataattctgatggttgtatttaacaagtgtaggattaattttagagaagttggagaatt 1004  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||| | ||| |||||||| ||||||||||||| |||||||||||    
T  1005 agggattaagagagaaattaaggattaattgatgtagaatggtta 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 17107 - 17244
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||| ||||||||||  |||||||| ||||||||||    
T  17107 taaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagggtaggattgattttagagaa-ttggagaatt 17205  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  17206 agggtt-aagtgagaaattgaggattaattgatgtagaat 17244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 23654 - 23848
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| |  | | | ||||||||||| |||||||||   ||||||||||||||||||| | | ||||||||||||| | ||| |||    
T  23654 gagaaaaagccaagagaagagcaagagacctagagtgctgcgattttgattattaaggtaagggtgagactaacttacaattctattaatctatatgatt 23753  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggt 209  Q
     ||||| ||||||||| |||||||||||||||||| ||||||||||| || ||||||||| | ||||||||||| |||||||||| |||||||||    
T  23754 ctgataattgtatttagcaagtgtaggattgaatttgagaagttggaaaactagggttaatgagagaaattgagaattaattgatgtagaatggt 23848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 33413 - 33276
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||| |||||    
T  33413 taaggtaagggtgagactagcattcaattctattaacctatataattctgatgattgtatttagcaagtgtaggattgaattggagaagttggaaaatta 33314  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    ||||||| |  ||||||||||||||||||||| |||||    
T  33313 gggttaatgaaagaaattgaggattaattgatgtagaa 33276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 8750 - 8567
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| ||||||||||||||||| | ||||| | ||| |||||||||| ||||||| |||||||||||||||||||||||||||||  | ||| |||    
T  8750 gagaaaaagccaagagaagggagaaagacctagatttctgcgattttgatctataaggt-agggtgagactagcattcaattctattaacctatatgatt 8652  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 199  Q
       ||  |||||||||||||||||  ||||||||||||||||||||| || ||||||||| | ||| ||||||||||||||||||    
T  8651 catatgattgtatttaacaagtgtgagattgaattagagaagttggaaaactagggttaatgagaggaattgaggattaattgat 8567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 135515 - 135644
Alignment:
Q  57 attttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaag 156  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||||||||| ||||||||||||| | |||||||||    
T  135515 attttgatttataaggtaagagtgagactagcattcaattctattaagttgtataattctgatggttgtatttagcaagtgtaggattaatttagagaag 135614  T
Q  157 ttggagaattagggttaaagtgagaaattga 187  Q
    ||||| |||||||||||||||||||||||||    
T  135615 ttgga-aattagggttaaagtgagaaattga 135644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 144223 - 144352
Alignment:
Q  57 attttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaag 156  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||||||||| ||||||||||||| | |||||||||    
T  144223 attttgatttataaggtaagagtgagactagcattcaattctattaagttgtataattctgatggttgtatttagcaagtgtaggattaatttagagaag 144322  T
Q  157 ttggagaattagggttaaagtgagaaattga 187  Q
    ||||| |||||||||||||||||||||||||    
T  144323 ttgga-aattagggttaaagtgagaaattga 144352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 12913 - 12777
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | ||||||||||||  | | ||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  12913 taaggtaagggtgagactaacttacaattctattaag-tctgtaattctgatggttgtatttaacaagtgtaggattgaattagagaaattggaaaatta 12815  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaa 205  Q
    || |||||| |||||||||||||||||||||| |||||    
T  12814 ggcttaaagagagaaattgaggattaattgatgtagaa 12777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 9769 - 9912
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | ||||||||||||| | ||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||| || ||    
T  9769 taaggtaagggtgagactaacttacaattctattaatctatatgattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaacta 9868  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | ||||||| ||| |||||||||| |||||||||||    
T  9869 gggttaatgagagaaatagagaattaattgatgtagaatggtta 9912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 26412 - 26533
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  26412 taaggtaagggtgagactagcattcaattctattaacctatgtaattctgatgattgtatttagcaagtataggattgaattagagaagtttgagaatta 26511  T
Q  168 gggttaaagtgagaaattgagg 189  Q
    ||||||||| || |||||||||    
T  26512 gggttaaagagataaattgagg 26533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 177 - 357
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||  |||||||||| || | | | ||||||||||| |||||  ||   ||||||||||||||||||||||||||||||||||||  ||||||| |    
T  177 gagaaaatgccaagagaagagaaagagacctagagtgctgcgatttgtattgctaaggtaagggtgagactagcattcaattctattaagttgtataact 276  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
       ||  ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||| ||||||    
T  277 catatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattaggattaatgagagaaattgagaattaat 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 1491 - 1350
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  ||||||  | ||||||| ||||  ||| |||||||||||||||||||   |||||||||||||| |||||    
T  1491 taaggtaagggtgagactagcattcaatcttattaag-tctataattctgatgattgaatttaacaagtgtaggattagtttagagaagttgga-aatta 1394  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||    
T  1393 gggttaaagtgagaaattgatgattaattgatgtagaattgtta 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 44 - 195
Target Start/End: Original strand, 8616 - 8767
Alignment:
Q  44 ctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagga 142  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||  ||||||| |   ||  ||||||||| |||||||| ||    
T  8616 ctagagtgctgcgatttttgattc-taaggtaagggtgagactagcattcaattctattaagttgtataactcatatgattgtatttagcaagtgtaaga 8714  T
Q  143 ttgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    |||||||| |||||||||| |||||||||||| | ||||||||||| ||||||    
T  8715 ttgaattaaagaagttggaaaattagggttaatgagagaaattgagaattaat 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 5271 - 5451
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| || | | | |||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||  | ||||| |    
T  5271 gagaaaaagccaagagaagagaaagagacctagagagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattaagttatataact 5370  T
Q  115 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
       ||  ||||||||| ||||||||||||||||||| ||||||| || |||||||||||| | ||||||||||| ||||||    
T  5371 catatgattgtatttagcaagtgtaggattgaattacagaagttagaaaattagggttaatgagagaaattgagaattaat 5451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 11325 - 11182
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||||||||||   | |||||||   ||  ||||| ||| |||||||| ||||||||||||||||||||| || ||    
T  11325 taaggtaagggtgagactagcattcaattctattatcctatataattcatatgattgtaattagcaagtgtatgattgaattagagaagttggaaaacta 11226  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||| | ||| |||||| ||||||||||| |||||||||||    
T  11225 gggttaatgagaggaattgatgattaattgatgtagaatggtta 11182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 11464 - 11321
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||| |  ||||||||||||||||||| ||||||||||||||| | | ||||| |   ||  ||||||||| |||||||||||||||||||    
T  11464 gctgcgattttgaactctaaggtaagggtgagactatcattcaattctattattctatataactcatatgattgtatttagcaagtgtaggattgaatta 11365  T
Q  151 gagaagttggagaattagggttaaagtgagaaattgaggattaa 194  Q
    ||||||||||| |||||||||||| | ||||||||||| |||||    
T  11364 gagaagttggaaaattagggttaatgagagaaattgagaattaa 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 17245 - 17349
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || |||||| |||||||||||||||||||||||||| || ||||||    
T  17245 taaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttagcaagtgtaggattgaattagagaagtagg-gaatta 17343  T
Q  168 gggtta 173  Q
    ||||||    
T  17344 gggtta 17349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 1181 - 1108
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagc 88  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   ||||||||||||||||||||||    
T  1181 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactagc 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 81242 - 81109
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||||||||||    | ||||| |||| |||||||| | ||||||||||||| | |||||||||||||| |||||    
T  81242 taaggtaagggtgagactagcattcaattctattaaggc-tgtaattctgatggttgtattga-caagtgtaggattaatttagagaagttgga-aatta 81146  T
Q  168 gggttaaagtgagaaattgaggattaattgatataga 204  Q
    ||||| |||||||||||||| ||||||||||| ||||    
T  81145 gggtttaagtgagaaattgatgattaattgatgtaga 81109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 117553 - 117473
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  117553 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 117473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 268622 - 268480
Alignment:
Q  67 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||  |||||||| ||||||    | ||||| ||||  ||  ||||||||||||||||||| | |||||||||||||||| ||    
T  268622 ataaggtaagggtgagactattattcaattatattaagcc-tgtaattctgatgattagatttaacaagtgtaggattaatttagagaagttggaga-tt 268525  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaatggtta 211  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  268524 agggttaaagtgagaaattgaggattaattgatgtagaattgtta 268480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 13833 - 13706
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| |||   ||  ||||||||| |||||||||||||||||||||||||||||| || ||    
T  13833 taaggtaagggtgagactaacattcaattctattaacctatatgattcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaacta 13734  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||| | ||||||||||| ||||||    
T  13733 gggttaatgagagaaattgagaattaat 13706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 17365 - 17495
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||| ||||||||  ||||||  | | ||||| |||| |||||||||||||||||||||||| |  |||| ||||||||| || |    
T  17365 taaggtaagggtgagactaacattcaatcttattaag-tctgtaattctgatggttgtatttaacaagtgtaggattagttttagtgaagttgga-aact 17462  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||||||| |||||| ||||    
T  17463 agggttaaagtgagaaattgatgattaactgat 17495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 25249 - 25372
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  25249 gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatataattatgatgatcatatttagcaagtgtaggattgaatta 25348  T
Q  151 gagaagttggagaattagggttaa 174  Q
    ||||||  ||||||||||||||||    
T  25349 gagaagacggagaattagggttaa 25372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 32679 - 32802
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 150  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  32679 gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 32778  T
Q  151 gagaagttggagaattagggttaa 174  Q
    ||||| | | ||||||||||||||    
T  32779 gagaaatcgaagaattagggttaa 32802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 33816 - 33864
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  33816 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 33864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 5461 - 5597
Alignment:
Q  69 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatta 167  Q
    |||||||||||||||||| ||||||||  ||||||  | | ||||| |||| |||||||||||||||||||||||| |  |||||||||||||| || ||    
T  5461 aaggtaagggtgagactaacattcaatcttattaag-tctgtaattctgatggttgtatttaacaagtgtaggattagttttagagaagttgga-aacta 5558  T
Q  168 gggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  5559 gggttaaagtgagaaattgatgattaattgatgtagaat 5597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 11117 - 10957
Alignment:
Q  15 gagaaaaaaccaagagaaggg--agaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataa 112  Q
    ||||||||||||||||||| |  ||| | | |||||| |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | ||||     
T  11117 gagaaaaaaccaagagaagagcaagagagacctagag-gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatatac 11019  T
Q  113 ttttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 174  Q
    || |||   |  |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11018 ttctgacgatcatatttagcaagtgtaggattgaattagagaagtcggagaattagggttaa 10957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 25475 - 25609
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | ||||||||||||  | | ||||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  25475 taaggtaagggtgagactaacttacaattctattaag-tctgtaattctgatgattgtatttagcaagtgtaggattgaattagagaagttgga-aatta 25572  T
Q  168 gggttaaagtgagaaattgaggattaattgatataga 204  Q
    ||||| ||||||| |||| | ||||||||||| ||||    
T  25573 gggtttaagtgaggaattaatgattaattgatgtaga 25609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 39289 - 39159
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| | || |||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  39289 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctaatggttgtatttaacaagtgtaggatttgttttagaaaagttg-agaatt 39192  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    ||||||||||||||||||||| |||||||||||    
T  39191 agggttaaagtgagaaattgatgattaattgat 39159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 7532 - 7405
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| |||||||||||||||   | |||||||   ||  ||||||  | |||||||||||||||||||||||||||||| || ||    
T  7532 taaggtaagggtgagactaacattcaattctattatcctatataattcatatgattgtatccagcaagtgtaggattgaattagagaagttggaaaacta 7433  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||| | ||||||||||||||||||    
T  7432 gggttaatgagagaaattgaggattaat 7405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 14912 - 14785
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| |||||||||||||||   | |||||||   ||  ||||||  | |||||||||||||||||||||||||||||| || ||    
T  14912 taaggtaagggtgagactaacattcaattctattatcctatataattcatatgattgtatccagcaagtgtaggattgaattagagaagttggaaaacta 14813  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||| | ||||||||||||||||||    
T  14812 gggttaatgagagaaattgaggattaat 14785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 197 - 321
Alignment:
Q  51 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 149  Q
    |||| |||||| |||| |||||||||||||||||||| | | ||||||||||||| | ||||||  ||||  |  |||||| ||||||||||||||||||    
T  197 gctgcgattttcatcctataaggtaagggtgagactaacttacaattctattaatctatataatcctgatgatcatatttagcaagtgtaggattgaatt 296  T
Q  150 agagaagttggagaattagggttaa 174  Q
    |||||||| ||||||||||||||||    
T  297 agagaagtcggagaattagggttaa 321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 86510 - 86382
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||| |||||||  | | ||||| ||||  ||  ||||||||||||||||||| | ||||||||||||||||||||    
T  86510 taaggtaagggtgagactagcattcaatcctattaag-tctgtaattctgatgatta-atttaacaagtgtaggattaatttagagaagttggagaatta 86413  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
     ||||||| |||| |||||| |||||||||||    
T  86412 -ggttaaattgaggaattgatgattaattgat 86382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 29456 - 29330
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 118  Q
    |||| ||||||||||||||||| | |||||| |||| |||||   || ||||||||| | |||||||| ||||||||||||||||| | ||||||| |||    
T  29456 aaaatccaagagaagggagaaacacctagagagctgcgatttcattctataaggtaatgatgagactaacattcaattctattaatctatataattctga 29357  T
Q  119 tagttgtatttaacaagtgtaggattg 145  Q
    |  || |||||||||||||||||||||    
T  29356 tgattttatttaacaagtgtaggattg 29330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 46899 - 46718
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| ||||||||||| ||||  | ||||||||||| |||||| | || |||||||||||||||||||| | | ||||| ||||||  | ||| ||    
T  46899 gagaaaaagccaagagaaggaagaaggacctagagtgctgcgattttcaatctataaggtaagggtgagactaacttacaattttattaacctatatgat 46800  T
Q  114 tttgatagttgtatttaacaagt-gtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 194  Q
    |   ||  || || ||| ||||| ||||||||||||||||||||||||| || ||||||||| | ||||| |||| ||||||    
T  46799 tcatatgattataattagcaagtcgtaggattgaattagagaagttggaaaactagggttaatgagagaatttgatgattaa 46718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 32107 - 32288
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaatatgtataat 113  Q
    |||||||| ||||||||||| ||||  | ||||||| ||| |||||| | || |||||||||||||||||||| | | ||||| ||||||  | ||| ||    
T  32107 gagaaaaagccaagagaaggaagaaggacctagagtactgcgattttcaatctataaggtaagggtgagactaacttacaattttattaacctatatgat 32206  T
Q  114 tttgatagttgtatttaacaagt-gtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 194  Q
    |   ||  || || ||| ||||| ||||||||||||||||||||||||| || ||||||||| | ||||| |||| ||||||    
T  32207 tcatatgattataattagcaagtcgtaggattgaattagagaagttggaaaactagggttaatgagagaatttgatgattaa 32288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 10311 - 10258
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  10311 gctgcgattttgatctataaggtaagggtgagactaactttacaattctattaa 10258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 17022 - 16969
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcattc-aattctattaa 103  Q
    |||| |||||||||| |||||||||||||||||||| | ||| |||||||||||    
T  17022 gctgcgattttgatctataaggtaagggtgagactaactttctaattctattaa 16969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 38173 - 38275
Alignment:
Q  72 gtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggt 171  Q
    ||||||||||||||| | | ||||||||||||| |  |||||| ||||  ||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  38173 gtaagggtgagactaacttacaattctattaatctaaataattctgatgattgtatttagcaagtgtaggattgaattagaaaggttggagaattagggt 38272  T
Q  172 taa 174  Q
    |||    
T  38273 taa 38275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 40840 - 40655
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtg-ctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataa 112  Q
    |||||||| |||||||||||||||| |  |||||| | ||| |||||| |||| |||||||||||||||||||| | | |||||||||||||   ||||     
T  40840 gagaaaaagccaagagaagggagaagac-ctagaggggctgagattttcatcctataaggtaagggtgagactaacttacaattctattaatccatatag 40742  T
Q  113 ttttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||  |  |||||| |||||||||||||||||||||||||| | |||||||||||||| |  |||| |||| |||||| ||||    
T  40741 ttctgatgatcatatttagcaagtgtaggattgaattagagaagtcgaagaattagggttaatgatagaatttgatgattaaatgat 40655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 339152 - 339258
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||| ||||||| |||||||||    
T  339152 taaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaattggagaagtcggagaatta 339251  T
Q  168 gggttaa 174  Q
    |||||||    
T  339252 gggttaa 339258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 15086 - 15159
Alignment:
Q  122 ttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    ||||||| |||||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  15086 ttgtattcaacaagtgtaggattgaattagagaagttggaaaactagggttaatgagagaaattgaggattaat 15159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 97
Target Start/End: Original strand, 15050 - 15079
Alignment:
Q  68 taaggtaagggtgagactagcattcaattc 97  Q
    ||||||||||||||||||||||||||||||    
T  15050 taaggtaagggtgagactagcattcaattc 15079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 54 - 181
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    |||||||||||||||||||||||||||||||| || | | ||||| |   ||  ||||||||| | |||||||||||||||||||| ||||| | |||||    
T  54 taaggtaagggtgagactagcattcaattctactattctatataactcatatgattgtatttagcgagtgtaggattgaattagagcagttgaaaaatta 153  T
Q  168 gggttaaagtgagaaattgaggattaat 195  Q
    ||||||| | |||||||| | |||||||    
T  154 gggttaatgagagaaattaaagattaat 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 16414 - 16521
Alignment:
Q  67 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 166  Q
    |||||||||||||||||||| | | ||||||||||||| | ||||||  ||||  |  |||||| |||||||||||||||||||||| ||| ||||||||    
T  16414 ataaggtaagggtgagactaacttacaattctattaatctatataatcctgatgatcatatttagcaagtgtaggattgaattagaggagtcggagaatt 16513  T
Q  167 agggttaa 174  Q
    ||||||||    
T  16514 agggttaa 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 78540 - 78629
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||| |  ||||| |||| |||||| ||   ||| ||||||||||||||| | || ||||||||||||    
T  78540 gagaaaaagccaagagaagggagaaacacatagagagctgcgattttcattgttaaagtaagggtgagactaactttgcaattctattaa 78629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 823 - 717
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| | | |||||||||||||   |||| || ||||  |  |||||| |||||||||||||||||||||||||| |||||||||    
T  823 taaggtaagggtgagactaacttacaattctattaatccatatagttctgatgatcatatttagcaagtgtaggattgaattagagaagtcggagaatta 724  T
Q  168 gggttaa 174  Q
    |||||||    
T  723 gggttaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 29680 - 29550
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||      |||||| ||||||||||||||||| |  |||||||| || |||||||    
T  29680 taaggtaagggtgagactagcattcaattctattaat-tctgtaattcaatcggttgtaattaacaagtgtaggattggttttagagaa-tttgagaatt 29583  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||||||||||||||   |||||||||||    
T  29582 agggttaaagtgagaaatttgagattaattgat 29550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 22499 - 22628
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||| |||| |||||||  | | ||||| |||| ||| ||||||||||||||||| || |  |||||||| || |||||||    
T  22499 taaggtaagggtgagactagcatgcaatcctattaa-gtctgtaattctgatggttttatttaacaagtgtagggttagttttagagaa-tttgagaatt 22596  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    | ||||||||||||||||||| |||||||||||    
T  22597 a-ggttaaagtgagaaattgatgattaattgat 22628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 62331 - 62459
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||||||||||||  || |||  | | ||||| ||||  ||  ||||||||| ||||||||| | ||||||||||||||||||||    
T  62331 taaggtaagggtgagactagcattcaatcttaataag-tctgtaattctgatgatta-atttaacaaatgtaggattaatttagagaagttggagaatta 62428  T
Q  168 gggttaaagtgagaaattgaggattaattgat 199  Q
     |||||||||||| |||||| |||||||||||    
T  62429 -ggttaaagtgaggaattgatgattaattgat 62459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 7627 - 7512
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 167  Q
    ||||||||||||||||||| ||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||  |||||||| || ||||||||    
T  7627 taaggtaagggtgagactaacattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggtttagagaa-tttgagaatta 7530  T
Q  168 gggttaaagtgagaaatt 185  Q
    |||||| ||||| |||||    
T  7529 gggttatagtgaaaaatt 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 17468 - 17598
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||      |||||| ||||||||||||||||| |  |||||||| || |||||||    
T  17468 taaggtaagggtgagactagcattcaattctattaat-tctgtaattcaatcggttgtaattaacaagtgtaggattggttttagagaa-tttgagaatt 17565  T
Q  167 agggttaaagtgag-aaattgaggattaattgat 199  Q
    |||||||||||||| ||||||| |||||||||||    
T  17566 agggttaaagtgagaaaattga-gattaattgat 17598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 10829 - 10725
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 166  Q
    |||||||||||||||||||||||||||||||||| || | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| ||||    
T  10829 taaggtaagggtgagactagcattcaattctattgat-tctgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaatt 10731  T
Q  167 agggtt 172  Q
    ||||||    
T  10730 agggtt 10725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 247 - 377
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    |||| |||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  247 taagataagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 344  T
Q  167 agggttaaagtgagaaattgaggattaattgat 199  Q
    |||||||| ||||||||||   |||||||||||    
T  345 agggttaaggtgagaaatttgagattaattgat 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 1636 - 1763
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| || |    
T  1636 taaggtaagggtgagactagcatacaattctattaat-tctgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaact 1734  T
Q  167 agggttaaagtgaga-aattgaggattaa 194  Q
    |||||||| | |||| |||||| ||||||    
T  1735 agggttaatgagagagaattgatgattaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 17744 - 17673
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  17744 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 17673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 23851 - 23978
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| || |    
T  23851 taaggtaagggtgagactagcatacaattctattaat-tatgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaact 23949  T
Q  167 agggttaaagtgaga-aattgaggattaa 194  Q
    |||||||| | |||| |||||| ||||||    
T  23950 agggttaatgagagagaattgatgattaa 23978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 31235 - 31147
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 103  Q
    |||||||| |||| |||||||||||| | ||||   |||| |||||||||   ||||||||||||||||||||||||||||||||||||    
T  31235 gagaaaaagccaatagaagggagaaagacctaggaagctgcgattttgattgttaaggtaagggtgagactagcattcaattctattaa 31147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 1555 - 1376
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 114  Q
    |||||||| |||||||||| || | | | | |||| |||| ||||||||| | |||||||||||||||| |||||||||||||||||||| | | |||||    
T  1555 gagaaaaagccaagagaagagaaagagaccaagagagctgcgattttgattc-taaggtaagggtgagattagcattcaattctattaat-tttgtaatt 1458  T
Q  115 ttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaattagggttaaagtga-gaaattgaggattaat 195  Q
        | |||||| |||||||||||||||| ||  |||||||| ||  |||||||||||||||| || |||||||| |||||||    
T  1457 caattggttgtaattaacaagtgtaggatggattttagagaa-tttcagaattagggttaaagagaggaaattgatgattaat 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 6942 - 6866
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||||||||||||||||| |||||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  6942 aaaaaccaagagaagggagaaagatctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 6866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 2983 - 2847
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  ||||| || ||| ||| ||    
T  2983 taaggtaagggtgagactagcattcaatcttattaag-tctttaattctgatgattaaatttaacaagtgtaggattagttttagataatttg-agagtt 2886  T
Q  167 agggttaaagtgagaaattgaggattaattgatatagaat 206  Q
    ||| ||||||||||||||||| ||||||||||| ||||||    
T  2885 agg-ttaaagtgagaaattgatgattaattgatgtagaat 2847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 98 - 9
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaa 103  Q
    |||||||| ||||||||||||||||  | ||||||| ||| |||||| | || |||||||||||||||||||| | | ||||||||||||    
T  98 gagaaaaagccaagagaagggagaaggacctagagtactgcgattttcaatctataaggtaagggtgagactaacttacaattctattaa 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 2232 - 2102
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 165  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||| | || ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  2232 taaggtaagggtgggactagcattcaattctattaa-gtctatgattctaatggttgtatttaacaggttgtaggattagtttttgagaa-tttgagaat 2135  T
Q  166 tagggttaaagtgagaaattgaggattaattgat 199  Q
    || |||||||||||||||||||  ||||||||||    
T  2134 ta-ggttaaagtgagaaattgataattaattgat 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 5676 - 5605
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    ||||||||||||||||||||||||| |  |||| ||||||| |||||| ||| ||||||||||||||||||||    
T  5676 gagaaaaaaccaagagaagggagaagac-ctaggagtgctgcgattttcatctataaggtaagggtgagacta 5605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 15136 - 15065
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| |||||||||||||||| |    ||||||||| |||||| ||| ||||||||||||||||||||    
T  15136 gagaaaaagccaagagaagggagaagacctaagagtgctgcgattttcatctataaggtaagggtgagacta 15065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 14610 - 14520
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcca--taaggtaagggtgagactagcattcaattctattaat 104  Q
    |||||||| |||||||||||||| |||  |||||| ||||||||||   || |  |||||||||| ||||||||||||||||||||||||||    
T  14610 gagaaaaagccaagagaagggaggaaagcctagagagctgtgatttct-tcaaactaaggtaaggatgagactagcattcaattctattaat 14520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 23069 - 23151
Alignment:
Q  13 gagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    ||||||||||  |||||||||||||||| | |||||| |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  23069 gagagaaaaagtcaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgtgactaacattcaat 23151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 31370 - 31434
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaaca 133  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||| |||| |||||||||||||    
T  31370 taaggtaagggtgggactagcattcaattctattaa-gtctatgattctgatggttgtatttaaca 31434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 366 - 277
Alignment:
Q  16 agaaaaaaccaagagaagggagaaaaatctaga-gtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||||| ||||||||||||||||  | | ||| | |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  366 agaaaaagccaagagaagggagaaccaccaagaagggctgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 137651 - 137603
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  137651 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 137603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 142589 - 142541
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  142589 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 142541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 145058 - 145010
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  145058 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 145010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 97999 - 97869
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattga-attagagaagttggagaat 165  Q
    |||||||||||||  |||| ||||||||||||||||  | ||| ||| |||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  97999 taaggtaagggtggaactaacattcaattctattaa-gtctatgattctgatggttgtatttaacaggttgtaggattaatttttgagaa-tttgagaat 97902  T
Q  166 tagggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||||||||| ||||||| |||||||||||    
T  97901 ta-ggttaaagtgataaattgatgattaattgat 97869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 107277 - 107147
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattga-attagagaagttggagaat 165  Q
    |||||||||||||  |||| ||||||||||||||||  | ||| ||| |||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  107277 taaggtaagggtggaactaacattcaattctattaa-gtctatgattctgatggttgtatttaacaggttgtaggattaatttttgagaa-tttgagaat 107180  T
Q  166 tagggttaaagtgagaaattgaggattaattgat 199  Q
    || ||||||||||| ||||||| |||||||||||    
T  107179 ta-ggttaaagtgataaattgatgattaattgat 107147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 7679 - 7599
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||||||||||| | || |||||  |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  7679 gagaaaaagccaagagaagggaggacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacattcaat 7599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 5452 - 5381
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagacta 86  Q
    |||||||| |||||||||||||| || | ||||||||||| |||||| |||  ||||||||||||||||||||    
T  5452 gagaaaaatccaagagaagggag-aagacctagagtgctgcgattttcatcttataaggtaagggtgagacta 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 13034 - 12963
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagacta 86  Q
    |||||||| |||||||||||||| || | ||||||||||| |||||| |||  ||||||||||||||||||||    
T  13034 gagaaaaatccaagagaagggag-aagacctagagtgctgcgattttcatcttataaggtaagggtgagacta 12963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 22986 - 22915
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagacta 86  Q
    |||||||| |||||||||||||| || | ||||||||||| |||||| |||  ||||||||||||||||||||    
T  22986 gagaaaaatccaagagaagggag-aagacctagagtgctgcgattttcatcttataaggtaagggtgagacta 22915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 8274 - 8194
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||||||||||||||||||||| | |||||  || |  |||||||   |||||||||||||| ||||| ||||||||    
T  8274 gagaaaaaaccaagagaagggagaaagacctagaaagcggctattttgagttataaggtaagggtgggactaacattcaat 8194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 7681 - 7769
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 103  Q
    |||||||| | |||||||||||||| || |||||  |||| |||||| ||   ||||||||||||||||||| | | ||||||||||||    
T  7681 gagaaaaagcaaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacttgcaattctattaa 7769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 42400 - 42320
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||| | |||||| | || |||||| ||   ||||||||||||| ||||| ||||||||    
T  42400 gagaaaaagccaagagaagggagaaacacctagagagttgcgattttcattgttaaggtaagggtgggactaacattcaat 42320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 190484 - 190610
Alignment:
Q  68 taaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaat 165  Q
    ||||||||||||||||||| | ||||| ||||||||||   ||||||| |||||| | || ||| |||| ||||||||||||||||| ||||| || ||     
T  190484 taaggtaagggtgagactaacgattcagttctattaattcatataattctgatag-tctaattagcaagttgtaggattgaattagaaaagttaga-aac 190581  T
Q  166 tagggttaaagtgagaaattgaggattaa 194  Q
    ||||||||| | ||| |||||| ||||||    
T  190582 tagggttaatgagaggaattgatgattaa 190610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 1973 - 2044
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 86  Q
    |||||||| |||||||||||||||| ||||| ||  |||| |||||| ||   |||||||||||||||||||    
T  1973 gagaaaaagccaagagaagggagaacaatctcgaaagctgcgattttcattgttaaggtaagggtgagacta 2044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 84457 - 84577
Alignment:
Q  69 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattag 168  Q
    |||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||   ||||||||| |||||||| | |||  |||||||||||||||     
T  84457 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattac-tttaacaagagtaggattaatttaaggaagttggagaatta- 84553  T
Q  169 ggttaaagtgagaaattgaggatt 192  Q
    |||||||||||| |||||| ||||    
T  84554 ggttaaagtgaggaattgatgatt 84577  T

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Target: scaffold1434 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 212 - 122
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| ||||||||||||||||| | ||||   |||| |||||| |||  |||||||||||||||||||| | || ||||||||||||    
T  212 gagaaaaagccaagagaagggagaaagacctaggaggctgcgattttcatcttataaggtaagggtgagactaactttgcaattctattaa 122  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 47732 - 47789
Alignment:
Q  136 tgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 194  Q
    ||||||||||||||||| |||||||| || ||||||||| | |||||||||| ||||||    
T  47732 tgtaggattgaattagaaaagttgga-aactagggttaatgagagaaattgatgattaa 47789  T

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Target: scaffold1257 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 1460 - 1537
Alignment:
Q  27 agagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||||||||| | |||||  ||||  ||||||||| ||||||||||||| |||||| | || ||||||||||||    
T  1460 agagaagggagaaagacctagaaagctgcaattttgatctataaggtaagggttagactaactttgcaattctattaa 1537  T

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Target: scaffold0876 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 2265 - 2318
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  2265 gctgcgattttgatctataaggtaagggtgagactaaccttgcaattctattaa 2318  T

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Target: scaffold0810 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 4853 - 4764
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagc-attcaattctattaa 103  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  ||   ||||||||||||||||||| |  ||||||||||||||    
T  4853 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaatttctaaggtaagggtgagactaacttttcaattctattaa 4764  T

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Target: scaffold0253 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 3805 - 3752
Alignment:
Q  51 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    ||||||||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  3805 gctgtgattttcatcaataaggtaagggtgagactaactttgcaattctattaa 3752  T

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Target: scaffold0230 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 14951 - 14871
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| || |||| |||||||| | ||||| ||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14951 gagaaaaagccgagaggagggagaaga-tctaggagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14871  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 4004 - 4076
Alignment:
Q  68 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagg 141  Q
    ||||||||||||||||||| ||||||||||| ||||  || || ||| |||| ||| ||||||||| |||||||    
T  4004 taaggtaagggtgagactaacattcaattctcttaagctg-atgattctgatggttatatttaacatgtgtagg 4076  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 5444 - 5355
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 103  Q
    |||||||| |||||||||| |||||  |  | ||| | || |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  5444 gagaaaaagccaagagaagagagaaccaagtggagggttgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 5355  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 7346 - 7386
Alignment:
Q  155 agttggagaattagggttaaagtgagaaattgaggattaat 195  Q
    ||||||| |||||||||||| | ||||||||||||||||||    
T  7346 agttggaaaattagggttaatgagagaaattgaggattaat 7386  T

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Target: scaffold0481 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 99 - 51
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  99 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 51  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 14363 - 14315
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14363 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14315  T

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Target: scaffold0319 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 6216 - 6136
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| ||||||||||||||||  | |||||| |||  |||||| ||   |||||||| |||||||||| ||||||||    
T  6216 gagaaaaagccaagagaagggagaagcacctagagagctacgattttcattgttaaggtaaaggtgagactaacattcaat 6136  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 2897 - 2945
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  2897 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 2945  T

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Target: scaffold0134 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 38791 - 38743
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  38791 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 38743  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 51307 - 51355
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  51307 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 51355  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 427 - 503
Alignment:
Q  19 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||| ||||||||||||||||| | |||||| | || |||||   || |||||||||||||||||| | ||||||||    
T  427 aaaagccaagagaagggagaaacacctagagagttgcgatttcattctataaggtaagggtgagacgaacattcaat 503  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 41369 - 41321
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  41369 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 41321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 56199 - 56247
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  56199 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 56247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 95380 - 95332
Alignment:
Q  47 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  95380 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 95332  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 158786 - 158706
Alignment:
Q  15 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 95  Q
    |||||||| | ||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  158786 gagaaaaagctaagagaagggagaaagacctagaaagcggcgattttgagtaataaggtaagggtgggactaacattcaat 158706  T

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