View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9001_low_57 (Length: 342)

Name: NF9001_low_57
Description: NF9001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9001_low_57
NF9001_low_57
[»] chr8 (35 HSPs)
chr8 (14-327)||(37449460-37449772)
chr8 (286-342)||(37392136-37392193)
chr8 (292-342)||(39211054-39211105)
chr8 (155-236)||(44907229-44907311)
chr8 (288-342)||(30439513-30439568)
chr8 (131-214)||(1773791-1773876)
chr8 (289-342)||(13924020-13924074)
chr8 (291-342)||(6243045-6243097)
chr8 (289-340)||(14233654-14233706)
chr8 (291-327)||(22719440-22719476)
chr8 (291-327)||(27325758-27325794)
chr8 (291-327)||(31249559-31249595)
chr8 (289-325)||(34810678-34810714)
chr8 (291-342)||(41776186-41776238)
chr8 (291-327)||(43397781-43397817)
chr8 (161-257)||(1876502-1876598)
chr8 (291-326)||(4054322-4054357)
chr8 (288-342)||(5740793-5740848)
chr8 (291-341)||(36675336-36675387)
chr8 (289-342)||(25430655-25430709)
chr8 (282-316)||(27454799-27454833)
chr8 (281-342)||(29107985-29108047)
chr8 (289-342)||(37656999-37657053)
chr8 (289-342)||(38939197-38939251)
chr8 (289-342)||(41541867-41541921)
chr8 (290-342)||(7010684-7010737)
chr8 (292-340)||(32020475-32020524)
chr8 (140-246)||(40628966-40629072)
chr8 (286-342)||(43590700-43590757)
chr8 (290-342)||(45405827-45405880)
chr8 (292-339)||(9630136-9630184)
chr8 (287-327)||(24479232-24479272)
chr8 (291-327)||(32501231-32501267)
chr8 (291-342)||(32777896-32777948)
chr8 (291-342)||(37471654-37471706)
[»] chr7 (44 HSPs)
chr7 (281-342)||(41989750-41989811)
chr7 (289-342)||(43942647-43942700)
chr7 (289-342)||(26749015-26749068)
chr7 (287-342)||(40108131-40108187)
chr7 (284-342)||(45420068-45420127)
chr7 (155-213)||(5907857-5907915)
chr7 (285-342)||(24380729-24380787)
chr7 (289-327)||(25192919-25192957)
chr7 (289-327)||(44895607-44895645)
chr7 (282-342)||(11352981-11353042)
chr7 (290-342)||(27570354-27570407)
chr7 (286-331)||(47391345-47391390)
chr7 (287-342)||(22330639-22330695)
chr7 (291-342)||(27866545-27866597)
chr7 (291-327)||(30941386-30941422)
chr7 (283-327)||(31398116-31398160)
chr7 (291-342)||(33465047-33465099)
chr7 (279-319)||(37352098-37352138)
chr7 (288-342)||(6822541-6822596)
chr7 (292-342)||(7817650-7817701)
chr7 (140-236)||(8237961-8238057)
chr7 (291-341)||(8459614-8459665)
chr7 (289-342)||(2323302-2323356)
chr7 (289-342)||(2469701-2469755)
chr7 (289-342)||(3937129-3937183)
chr7 (285-342)||(5905973-5906031)
chr7 (289-323)||(22918480-22918514)
chr7 (289-342)||(37351998-37352052)
chr7 (286-327)||(2362659-2362700)
chr7 (290-327)||(13152592-13152629)
chr7 (282-342)||(25272593-25272654)
chr7 (290-342)||(33224834-33224887)
chr7 (290-342)||(35293127-35293180)
chr7 (291-339)||(37848631-37848680)
chr7 (290-342)||(47078258-47078311)
chr7 (290-342)||(49142525-49142578)
chr7 (288-327)||(12007220-12007260)
chr7 (314-342)||(28081790-28081818)
chr7 (279-342)||(31785479-31785543)
chr7 (314-342)||(33684715-33684743)
chr7 (287-342)||(37856173-37856229)
chr7 (291-327)||(38861096-38861132)
chr7 (291-327)||(38956651-38956687)
chr7 (291-327)||(44189345-44189381)
[»] chr5 (33 HSPs)
chr5 (289-342)||(14923081-14923134)
chr5 (289-342)||(14206398-14206452)
chr5 (289-337)||(16972112-16972160)
chr5 (288-327)||(7076422-7076461)
chr5 (292-342)||(33910096-33910147)
chr5 (289-342)||(12203156-12203210)
chr5 (140-246)||(26453640-26453745)
chr5 (290-327)||(33037519-33037556)
chr5 (287-327)||(1274354-1274394)
chr5 (291-327)||(28306167-28306203)
chr5 (288-327)||(18660756-18660795)
chr5 (288-342)||(32732126-32732181)
chr5 (289-342)||(372728-372782)
chr5 (289-342)||(4434480-4434534)
chr5 (289-342)||(9226311-9226365)
chr5 (289-342)||(13734368-13734422)
chr5 (289-327)||(26791279-26791317)
chr5 (285-342)||(39458662-39458720)
chr5 (294-342)||(1839352-1839401)
chr5 (290-342)||(6865795-6865848)
chr5 (290-342)||(8725430-8725483)
chr5 (289-337)||(12878754-12878803)
chr5 (286-327)||(15479464-15479505)
chr5 (313-342)||(16553538-16553567)
chr5 (290-327)||(18258828-18258865)
chr5 (294-327)||(19522038-19522071)
chr5 (294-338)||(21210833-21210878)
chr5 (290-342)||(43153068-43153121)
chr5 (314-342)||(3634529-3634557)
chr5 (314-342)||(12401227-12401255)
chr5 (291-323)||(22649700-22649732)
chr5 (161-246)||(36609151-36609236)
chr5 (291-323)||(39807753-39807785)
[»] chr1 (62 HSPs)
chr1 (125-214)||(40341635-40341724)
chr1 (155-207)||(30548313-30548365)
chr1 (284-342)||(50781577-50781636)
chr1 (291-342)||(51718634-51718687)
chr1 (158-256)||(34861229-34861327)
chr1 (282-342)||(46903472-46903533)
chr1 (279-342)||(14983772-14983836)
chr1 (289-341)||(48103398-48103450)
chr1 (288-342)||(30414872-30414927)
chr1 (288-327)||(33100805-33100844)
chr1 (288-342)||(33358166-33358221)
chr1 (289-327)||(2571633-2571671)
chr1 (289-342)||(8200085-8200139)
chr1 (289-327)||(8350231-8350269)
chr1 (289-342)||(40596062-40596116)
chr1 (289-342)||(45272168-45272222)
chr1 (161-214)||(9931808-9931861)
chr1 (161-214)||(40053326-40053379)
chr1 (290-342)||(48220151-48220204)
chr1 (291-327)||(3159376-3159412)
chr1 (161-246)||(4040894-4040979)
chr1 (291-342)||(16252767-16252819)
chr1 (283-327)||(35369692-35369736)
chr1 (291-327)||(37685331-37685367)
chr1 (291-327)||(37700151-37700187)
chr1 (291-342)||(40139126-40139178)
chr1 (291-342)||(41507202-41507254)
chr1 (288-327)||(15083085-15083124)
chr1 (292-342)||(19969569-19969620)
chr1 (288-342)||(27687527-27687582)
chr1 (288-342)||(44632537-44632592)
chr1 (292-342)||(45065909-45065960)
chr1 (292-342)||(50460720-50460771)
chr1 (289-327)||(3982066-3982104)
chr1 (289-342)||(11121490-11121544)
chr1 (163-246)||(31043002-31043085)
chr1 (161-236)||(33791759-33791834)
chr1 (289-338)||(43612092-43612142)
chr1 (161-256)||(48947195-48947290)
chr1 (289-342)||(49453489-49453543)
chr1 (289-342)||(50797789-50797843)
chr1 (161-214)||(16113952-16114005)
chr1 (286-342)||(21446226-21446283)
chr1 (294-327)||(30735328-30735361)
chr1 (291-339)||(35030773-35030822)
chr1 (289-342)||(36954669-36954721)
chr1 (290-342)||(43757598-43757651)
chr1 (290-327)||(45333569-45333606)
chr1 (291-335)||(48872043-48872088)
chr1 (290-342)||(49241512-49241565)
chr1 (155-236)||(48900-48981)
chr1 (285-332)||(10385421-10385469)
chr1 (287-323)||(12657218-12657254)
chr1 (291-342)||(18336158-18336210)
chr1 (314-342)||(18610808-18610836)
chr1 (291-327)||(23645411-23645447)
chr1 (291-327)||(27465092-27465128)
chr1 (291-327)||(37275068-37275104)
chr1 (287-342)||(42539414-42539470)
chr1 (291-342)||(47398459-47398511)
chr1 (283-342)||(48325786-48325846)
chr1 (287-327)||(50726283-50726323)
[»] chr2 (45 HSPs)
chr2 (290-341)||(9647143-9647194)
chr2 (291-342)||(37737985-37738036)
chr2 (288-333)||(27695975-27696020)
chr2 (280-339)||(3012856-3012916)
chr2 (290-341)||(10060443-10060494)
chr2 (155-246)||(40874816-40874908)
chr2 (289-342)||(6646833-6646887)
chr2 (285-342)||(29795441-29795499)
chr2 (290-327)||(6511250-6511287)
chr2 (192-258)||(8086944-8087010)
chr2 (290-327)||(18254244-18254281)
chr2 (289-342)||(6049352-6049407)
chr2 (291-327)||(9760017-9760053)
chr2 (155-240)||(21277560-21277644)
chr2 (291-342)||(24727426-24727478)
chr2 (291-342)||(45202140-45202192)
chr2 (288-342)||(33737341-33737396)
chr2 (289-342)||(11828828-11828882)
chr2 (296-334)||(19633295-19633333)
chr2 (296-334)||(19830196-19830234)
chr2 (289-327)||(27490765-27490803)
chr2 (285-342)||(27538924-27538982)
chr2 (289-342)||(28013965-28014019)
chr2 (289-342)||(32972914-32972968)
chr2 (289-342)||(42081046-42081100)
chr2 (289-341)||(2971823-2971876)
chr2 (289-342)||(4263872-4263925)
chr2 (282-342)||(6885488-6885549)
chr2 (290-327)||(9207589-9207626)
chr2 (290-342)||(22296137-22296190)
chr2 (290-327)||(41042253-41042290)
chr2 (290-342)||(42678760-42678813)
chr2 (291-327)||(2076569-2076605)
chr2 (287-342)||(4138193-4138249)
chr2 (314-342)||(4723601-4723629)
chr2 (291-342)||(7121390-7121442)
chr2 (291-342)||(8757555-8757607)
chr2 (290-341)||(10550468-10550520)
chr2 (292-336)||(17999691-17999735)
chr2 (169-246)||(37284914-37284991)
chr2 (291-342)||(38600825-38600877)
chr2 (291-327)||(42421933-42421969)
chr2 (314-342)||(42554811-42554839)
chr2 (287-342)||(43205103-43205156)
chr2 (291-327)||(44287475-44287511)
[»] chr4 (53 HSPs)
chr4 (289-342)||(46686243-46686296)
chr4 (290-342)||(39605978-39606030)
chr4 (292-342)||(5386385-5386436)
chr4 (155-214)||(38354495-38354554)
chr4 (285-342)||(28657448-28657506)
chr4 (287-342)||(1868901-1868957)
chr4 (291-342)||(24310529-24310581)
chr4 (287-327)||(37297045-37297085)
chr4 (165-246)||(50617497-50617578)
chr4 (156-256)||(22889251-22889351)
chr4 (156-256)||(22940915-22941015)
chr4 (288-327)||(23369367-23369406)
chr4 (289-327)||(43174982-43175020)
chr4 (289-342)||(43769721-43769775)
chr4 (290-327)||(29531640-29531677)
chr4 (290-342)||(31657657-31657710)
chr4 (290-327)||(36177905-36177942)
chr4 (290-342)||(42490919-42490972)
chr4 (291-327)||(5622458-5622494)
chr4 (290-337)||(27384186-27384234)
chr4 (291-327)||(37997256-37997292)
chr4 (291-327)||(39440484-39440520)
chr4 (280-327)||(51255735-51255783)
chr4 (287-342)||(4106050-4106105)
chr4 (289-339)||(31413797-31413848)
chr4 (289-342)||(4511823-4511877)
chr4 (289-342)||(37022270-37022324)
chr4 (289-323)||(38134351-38134385)
chr4 (290-342)||(2109442-2109495)
chr4 (289-337)||(7146144-7146193)
chr4 (291-339)||(7795025-7795074)
chr4 (290-342)||(9827991-9828044)
chr4 (294-342)||(22072263-22072312)
chr4 (290-342)||(26718379-26718432)
chr4 (290-342)||(26731007-26731060)
chr4 (156-205)||(27748482-27748531)
chr4 (290-342)||(32621637-32621690)
chr4 (290-327)||(45082980-45083017)
chr4 (290-338)||(48494924-48494973)
chr4 (289-341)||(54036538-54036591)
chr4 (314-342)||(1688436-1688464)
chr4 (291-338)||(4974111-4974159)
chr4 (291-327)||(10250550-10250586)
chr4 (291-342)||(32365675-32365727)
chr4 (291-342)||(37731926-37731978)
chr4 (291-342)||(39241309-39241361)
chr4 (290-342)||(41347475-41347527)
chr4 (288-320)||(44539733-44539765)
chr4 (314-342)||(45277089-45277117)
chr4 (287-342)||(46173546-46173602)
chr4 (291-327)||(46634100-46634136)
chr4 (278-342)||(50608632-50608696)
chr4 (314-342)||(56379427-56379455)
[»] chr3 (41 HSPs)
chr3 (289-342)||(19149000-19149053)
chr3 (288-342)||(29846899-29846954)
chr3 (290-342)||(28700471-28700524)
chr3 (291-342)||(3484770-3484822)
chr3 (291-342)||(29057659-29057711)
chr3 (288-342)||(23906995-23907050)
chr3 (289-342)||(46952947-46953001)
chr3 (289-342)||(49761317-49761371)
chr3 (289-342)||(50745558-50745612)
chr3 (290-327)||(27541537-27541574)
chr3 (290-342)||(35368621-35368674)
chr3 (290-327)||(46623906-46623943)
chr3 (290-342)||(47683800-47683853)
chr3 (290-342)||(48490521-48490574)
chr3 (290-327)||(52939652-52939689)
chr3 (286-342)||(55361241-55361298)
chr3 (291-327)||(26014812-26014848)
chr3 (290-342)||(38957520-38957572)
chr3 (287-342)||(48117343-48117399)
chr3 (283-342)||(49361843-49361903)
chr3 (280-338)||(1765393-1765452)
chr3 (291-338)||(32205607-32205654)
chr3 (292-327)||(42357115-42357150)
chr3 (288-342)||(43169761-43169816)
chr3 (292-327)||(47472330-47472365)
chr3 (289-323)||(5114076-5114110)
chr3 (291-341)||(24256780-24256830)
chr3 (290-324)||(38926627-38926661)
chr3 (294-340)||(50318393-50318439)
chr3 (282-327)||(7668222-7668267)
chr3 (287-327)||(23377978-23378019)
chr3 (290-323)||(36671053-36671086)
chr3 (290-327)||(37453198-37453235)
chr3 (161-214)||(45757962-45758015)
chr3 (291-327)||(5244229-5244265)
chr3 (295-327)||(16129526-16129558)
chr3 (291-327)||(37302546-37302582)
chr3 (287-342)||(44937215-44937271)
chr3 (290-341)||(50876371-50876423)
chr3 (291-327)||(52254173-52254209)
chr3 (291-327)||(52326019-52326055)
[»] scaffold0054 (1 HSPs)
scaffold0054 (288-342)||(31608-31663)
[»] chr6 (23 HSPs)
chr6 (140-214)||(21130729-21130804)
chr6 (286-327)||(22079598-22079639)
chr6 (287-327)||(1156717-1156757)
chr6 (291-339)||(18737578-18737626)
chr6 (281-342)||(17442823-17442885)
chr6 (288-341)||(28748121-28748175)
chr6 (289-340)||(2165310-2165362)
chr6 (289-340)||(2176943-2176995)
chr6 (291-327)||(8098630-8098666)
chr6 (291-327)||(25811873-25811909)
chr6 (291-342)||(32644623-32644675)
chr6 (291-327)||(34047387-34047423)
chr6 (291-342)||(15974621-15974671)
chr6 (288-342)||(25567498-25567553)
chr6 (288-342)||(31517188-31517243)
chr6 (289-342)||(2060641-2060695)
chr6 (281-342)||(5028273-5028335)
chr6 (291-339)||(16121163-16121212)
chr6 (290-327)||(32316963-32317000)
chr6 (290-326)||(552792-552828)
chr6 (291-342)||(9395345-9395397)
chr6 (314-342)||(25554280-25554308)
chr6 (291-342)||(32135439-32135491)
[»] scaffold0286 (1 HSPs)
scaffold0286 (289-340)||(17047-17099)
[»] scaffold0020 (1 HSPs)
scaffold0020 (287-327)||(165469-165509)
[»] scaffold0100 (1 HSPs)
scaffold0100 (289-339)||(44784-44835)
[»] scaffold0098 (1 HSPs)
scaffold0098 (288-327)||(49292-49331)
[»] scaffold0067 (1 HSPs)
scaffold0067 (292-327)||(35524-35559)
[»] scaffold0010 (1 HSPs)
scaffold0010 (161-236)||(26712-26787)
[»] scaffold0155 (1 HSPs)
scaffold0155 (290-342)||(3279-3332)
[»] scaffold0318 (1 HSPs)
scaffold0318 (289-342)||(18297-18352)


Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 327
Target Start/End: Complemental strand, 37449772 - 37449460
Alignment:
Q  14 cacaaaatttgtgctgtggaatagtttagtattaaaaagcacacactaatcacattttgtattatgagtacgagtaccattctatttcagaagggaaagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||| ||||||||    
T  37449772 cacaaaatttgtgctgtggaatagtttagtattaaaaagcacacactaatcacattttgtattatgagttcgagtaccatttttttt-agatgggaaagg 37449674  T
Q  114 ttaactattgtccccgagacattaagtaaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattt 213  Q
    ||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37449673 ttaactattgtccccgaaacattaggtaagaaccttcaaccgtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattt 37449574  T
Q  214 tnnnnnnntaattacttaatttaaaatgtttaaggaatgccccgagagagtactcattaacaagaccatttttataagagaaatgatatttgagcaacca 313  Q
    |       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  37449573 taaaaaaataattacttaatttaaaatgtttaaggaatgccacgagagagtactcattaacaagaccatttttataagagaaatgatatttcaacaacca 37449474  T
Q  314 ttttttacaacttt 327  Q
    ||||||||||||||    
T  37449473 ttttttacaacttt 37449460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 37392193 - 37392136
Alignment:
Q  286 tataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  37392193 tataagagaaatgatatttgtacaaccattttttgacaactttctctctcatactcac 37392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 39211054 - 39211105
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcac 39211105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 44907311 - 44907229
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattg-aaaagtttgacattttnnnnnnntaattacttaattta 236  Q
    ||||| ||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||       |||||||||||||||    
T  44907311 gtaaatttttatgaaagttagtgttattagtgcattgaaaattgaaaaagtttgacatttttaaaaaataattacttaattta 44907229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 30439568 - 30439513
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  30439568 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 30439513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 1773791 - 1773876
Alignment:
Q  131 gacattaagtaaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaattg--aaaagtttgacatttt 214  Q
    |||||||| ||||||| || ||  |||||||||||||||||| || | |||||||| |||| ||||||  ||||||||||||||||    
T  1773791 gacattaattaaggactttaaatagtaaacttttatgaaagtaagtgcaattagtgcattggaaattgaaaaaagtttgacatttt 1773876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 13924020 - 13924074
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  13924020 aagagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcac 13924074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 6243045 - 6243097
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||| ||||||| ||||||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcac 6243097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 14233706 - 14233654
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactc 340  Q
    |||||||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  14233706 aagagaaatgatatttgtacaactatttttttacaactttctctctcatactc 14233654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 22719440 - 22719476
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  22719440 gagaaatgatatttgaacaaccattttttacaacttt 22719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 27325758 - 27325794
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  27325758 gagaaatgatatttgaacaaccattttttacaacttt 27325794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 31249595 - 31249559
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  31249595 gagaaatgatatttgaacaaccattttttacaacttt 31249559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 34810714 - 34810678
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaact 325  Q
    |||||||||||||||||| ||||||||||||||||||    
T  34810714 aagagaaatgatatttgaacaaccattttttacaact 34810678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 41776186 - 41776238
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcac 41776238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 43397781 - 43397817
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  43397781 gagaaatgatatttgaacaaccattttttacaacttt 43397817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 1876502 - 1876598
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaaggaatgccccg 257  Q
    ||||||||||||| | ||||| |||| |||| |||||||||| |||||||||||       |||||||||||||||  ||| |||| || |||||||    
T  1876502 ttttatgaaagtttgtgtaatcagtgcattggaaattgaaaattttgacattttaaaagaataattacttaatttagcatgcttaaagagtgccccg 1876598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 326
Target Start/End: Complemental strand, 4054357 - 4054322
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaactt 326  Q
    |||||||||||||||| |||||||||||||||||||    
T  4054357 gagaaatgatatttgaacaaccattttttacaactt 4054322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 5740848 - 5740793
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||| ||||| |||||||| ||||||||||||||    
T  5740848 taagagaaatgatatttgtacaaccactttttgacaactttttctctcatactcac 5740793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 36675336 - 36675387
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactca 341  Q
    |||||||||||||||  ||||||||||| ||||||||| |||||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 25430655 - 25430709
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||||||||||| |||||| |||| ||||||||||||    
T  25430655 aagagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcac 25430709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 27454833 - 27454799
Alignment:
Q  282 tttttataagagaaatgatatttgagcaaccattt 316  Q
    ||||||||||||||||||||||||| |||||||||    
T  27454833 tttttataagagaaatgatatttgaacaaccattt 27454799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 29107985 - 29108047
Alignment:
Q  281 atttttataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||| |||||||||||||||||  ||| |||||||| |||||||||||| | ||||||||    
T  29107985 atttttaaaagagaaatgatatttgtacaatcattttttaacaactttctcttttatactcac 29108047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 37656999 - 37657053
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||  | |||||||||||||||||||||||    
T  37656999 aagagaaatgatatttgaacatccatttagtgacaactttctctctcatactcac 37657053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 38939251 - 38939197
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||   |||| |||||| ||||||||||||||||||||||||    
T  38939251 aagagaaatgatatttctacaactatttttgtacaactttctctctcatactcac 38939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 41541867 - 41541921
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||| | |||||||||||||| ||||||||    
T  41541867 aagagaaatgatatttgaacatccattttgtgacaactttctctcttatactcac 41541921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 7010684 - 7010737
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||| |||||||| |||| ||||||||||||||||||    
T  7010684 agagaaatgatatttgtacaatcattttttgacaattttctctctcatactcac 7010737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 32020524 - 32020475
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactc 340  Q
    ||||||||||||||  |||||||||||| | |||||||||||||||||||    
T  32020524 agaaatgatatttgtacaaccattttttgataactttctctctcatactc 32020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 40628966 - 40629072
Alignment:
Q  140 taaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaa 239  Q
    |||||||||| ||  |||| ||||||| |||||| | ||||| |||| |||| ||||| |||| ||| |||||||       |||||||||||||||| |    
T  40628966 taaggaccttaaatagtaatcttttataaaagtttgtgtaatcagtgaattggaaattaaaaactttaacatttttaatgaataattacttaatttaaca 40629065  T
Q  240 tgtttaa 246  Q
    |||||||    
T  40629066 tgtttaa 40629072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 43590700 - 43590757
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||||||   || ||||||| || |||||||||||||||||||||    
T  43590700 tataagagaaatgatatttgtataatcatttttgtataactttctctctcatactcac 43590757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 45405880 - 45405827
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||||||||||  ||||||||| ||||||||||||||    
T  45405880 agagaaatgatatttgtacaaccattttgatacaactttttctctcatactcac 45405827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 9630136 - 9630184
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatact 339  Q
    ||||||||||||||| ||| |||||||| |||||||||||| |||||||    
T  9630136 agaaatgatatttgaacaatcattttttaacaactttctctttcatact 9630184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 24479232 - 24479272
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||||| ||||||||||| | ||||||    
T  24479232 ataagagaaatgatatttgaacaaccatttttgataacttt 24479272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 32501267 - 32501231
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  32501267 gagaaatgatatttgaacaatcattttttacaacttt 32501231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 32777896 - 32777948
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||| ||  ||||||||||| ||||||||||||||| ||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcac 32777948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 37471654 - 37471706
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||| |||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcac 37471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 41989811 - 41989750
Alignment:
Q  281 atttttataagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  41989811 atttttttaagagaaatgatattttaacaaccattttttacaactttctctctcatactcac 41989750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 43942647 - 43942700
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  43942647 aagagaaatgatatttgaacaactattttttacaactttctctctcatactcac 43942700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 26749015 - 26749068
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  26749015 aagagaaatgatatttgaacaacaatttttgacaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 40108131 - 40108187
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  40108131 ataagagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcac 40108187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 45420127 - 45420068
Alignment:
Q  284 tttataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||| ||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||    
T  45420127 tttattagagaaatgatatttgaacaactattttttgacaactttctctctcatattcac 45420068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 5907915 - 5907857
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattt 213  Q
    |||||||||||||||| |||| |||||||||| |||| ||||  |||||||||||||||    
T  5907915 gtaaacttttatgaaaattagtgtaattagtgcattggaaataaaaaagtttgacattt 5907857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 24380787 - 24380729
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  24380787 ttattagagaaatgatatttgtacaaccatttttatacaactttctttctcatactcac 24380729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 25192957 - 25192919
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25192957 aagagaaatgatatttgaacaaccattttttacaacttt 25192919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 44895645 - 44895607
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  44895645 aagagaaatgatatttgaacaaccattttttacaacttt 44895607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 11353042 - 11352981
Alignment:
Q  282 tttttataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||| ||||||||||||||||||| || | ||||| | |||||||||||||||||||||||    
T  11353042 tttttctaagagaaatgatatttgaacatcaattttgtgacaactttctctctcatactcac 11352981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 27570354 - 27570407
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  27570354 agagaaatgatatttgaacaactattttttaataactttctctctcatactcac 27570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 47391390 - 47391345
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattttttacaactttctct 331  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||    
T  47391390 tataggagaaatgatatttgaacaaccatttttaacaactttctct 47391345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 22330695 - 22330639
Alignment:
Q  287 ataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  22330695 ataagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 22330639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 27866597 - 27866545
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||||||||||| ||||||||| ||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcac 27866545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 30941386 - 30941422
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30941386 gagaaatgatatttgaacaaccattttttacaacttt 30941422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 31398116 - 31398160
Alignment:
Q  283 ttttataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||||||||  |||||||||| |||||||||    
T  31398116 ttttataagagaaatgatatttgtacaaccattttatacaacttt 31398160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 33465099 - 33465047
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcac 33465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 37352098 - 37352138
Alignment:
Q  279 ccatttttataagagaaatgatatttgagcaaccatttttt 319  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  37352098 ccatttttttaagagaaatgatatttgaacaaccatttttt 37352138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 6822596 - 6822541
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||||||| | |||||||| ||||||||||||||    
T  6822596 taagagaaatgatatttgtacaaccattttctaacaactttttctctcatactcac 6822541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 7817650 - 7817701
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  7817650 agaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 7817701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 8238057 - 8237961
Alignment:
Q  140 taaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaattta 236  Q
    |||||||||| ||  ||||  ||||||||||||| | ||||| |||| |||||||| |||||| |||||||||||       |||||||||||||||    
T  8238057 taaggaccttaaatggtaactttttatgaaagtttgtgtaatcagtgcattgaaaaatgaaaactttgacatttttaaagaataattacttaattta 8237961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 8459614 - 8459665
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttta-caactttctctctcatactca 341  Q
    |||||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  8459614 gagaaatgatatttgtacaaccactttttaacaactttctctctcatactca 8459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 2323302 - 2323356
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||| ||||| | |||||||||||||||||||||||    
T  2323302 aagagaaatgatatttgtacaacaattttatgacaactttctctctcatactcac 2323356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 2469701 - 2469755
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  2469701 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 2469755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 3937183 - 3937129
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || | ||||| | |||||||||||||||||||||||    
T  3937183 aagagaaatgatatttgaacatctattttgtgacaactttctctctcatactcac 3937129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 5906031 - 5905973
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||  ||| ||||||  || |||||||||||||||||||||    
T  5906031 ttataagagaaatgatatttgtacaatcattttggtataactttctctctcatactcac 5905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 22918514 - 22918480
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaa 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  22918514 aagagaaatgatatttgaacaaccattttttacaa 22918480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 37352052 - 37351998
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  37352052 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 37351998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 2362659 - 2362700
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||| |||||||||||| ||| ||||||||||||||||||||    
T  2362659 tatatgagaaatgatatatgaacaaccattttttacaacttt 2362700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 13152592 - 13152629
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  13152592 agagaaatgatatttgaacaaccatttttgacaacttt 13152629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 25272593 - 25272654
Alignment:
Q  282 tttttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||| || |||||||||||||||  ||||||||||| ||||||||||||||  ||||||||    
T  25272593 tttttttatgagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcac 25272654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 33224834 - 33224887
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || | ||||| | |||||||||||||||||||||||    
T  33224834 agagaaatgatatttgaacatctattttgtgacaactttctctctcatactcac 33224887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 35293127 - 35293180
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||||||||| |||||||||| ||| ||||||||    
T  35293127 agagaaatgatatttgaacatccattttttgacaactttctttcttatactcac 35293180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 37848680 - 37848631
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatact 339  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 47078311 - 47078258
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || | ||||| | |||||||||||||||||||||||    
T  47078311 agagaaatgatatttgaacatctattttatgacaactttctctctcatactcac 47078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 49142578 - 49142525
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||||||||||| || || ||||||||||||||||||    
T  49142578 agagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcac 49142525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 12007260 - 12007220
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaacttt 327  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  12007260 taagagaaatgatatttgaacaaccattttttgacaacttt 12007220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 28081818 - 28081790
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  28081818 ttttttacaactttctctctcatactcac 28081790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 31785543 - 31785479
Alignment:
Q  279 ccatttttataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||| | |||||||||||||||||  |||||| ||| | | |||||||||||||||||||||    
T  31785543 ccattttcaaaagagaaatgatatttgtacaaccactttatgaaaactttctctctcatactcac 31785479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 33684715 - 33684743
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  33684715 ttttttacaactttctctctcatactcac 33684743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 37856229 - 37856173
Alignment:
Q  287 ataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||  |||||||||| | |||||||| |||| |||||||||    
T  37856229 ataagagaaatgatatttgtacaaccattttgtgacaactttatctcacatactcac 37856173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 38861096 - 38861132
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  38861096 gagaaatgatatttgaacaatcattttttacaacttt 38861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 38956687 - 38956651
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||| | ||||||||||||||||||||    
T  38956687 gagaaatgatatttaaacaaccattttttacaacttt 38956651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 44189381 - 44189345
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  44189381 gagaaatgatatttgaacaaccattttttataacttt 44189345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 14923081 - 14923134
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14923081 aagagaaatgatatttgaacaaccattttttacaactttctctctcatactcac 14923134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 14206398 - 14206452
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  14206398 aagagaaatgatatttgtacaaccattttttgacaactttctctctcatactcac 14206452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 16972160 - 16972112
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcata 337  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  16972160 aagagaaatgatattttaacaaccattttttacaaccttctctctcata 16972112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 7076422 - 7076461
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  7076422 taagagaaatgatatttgaacaaccattttttacaacttt 7076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 33910147 - 33910096
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcac 33910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 12203156 - 12203210
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  12203156 aagagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcac 12203210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 26453640 - 26453745
Alignment:
Q  140 taaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaa 239  Q
    |||||||||| ||  |||||||||||| ||| || | ||||  || | |||||||||||||||||||||||||||       | ||||||||||||||||    
T  26453640 taaggaccttaaatggtaaacttttataaaaatttgtgtaaccagcgcattgaaaattgaaaagtttgacatttttaaaaaat-attacttaatttaaaa 26453738  T
Q  240 tgtttaa 246  Q
    |||||||    
T  26453739 tgtttaa 26453745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 33037519 - 33037556
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33037519 agagaaatgatatttgaacaaccattttttacaacttt 33037556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 1274354 - 1274394
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  1274354 ataagagaaatgatatttgaacaaccatttttgacaacttt 1274394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 28306203 - 28306167
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  28306203 gagaaatgatatttgaacaaccattttttacaacttt 28306167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 18660756 - 18660795
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  18660756 taagagaaatgatatttgaacaaccatttttgacaacttt 18660795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 32732181 - 32732126
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||| |||||||  ||| ||||||| ||||||||||||||||||||||||    
T  32732181 taagagaaattatatttgtacaatcatttttgtacaactttctctctcatactcac 32732126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 372782 - 372728
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||| ||||  |||||||||| | |||||||||||||||||||||||    
T  372782 aagagaaatgatttttgtacaaccattttgtgacaactttctctctcatactcac 372728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 4434480 - 4434534
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||||||||| |||| ||| ||||||||||||||    
T  4434480 aagagaaatgatatttgtacaaccattttttgacaattttttctctcatactcac 4434534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 9226311 - 9226365
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||  | |||||||||||||||||||||||    
T  9226311 aagagaaatgatatttgaacatccatttaatgacaactttctctctcatactcac 9226365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 13734422 - 13734368
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  13734422 aagagaaatgatatttgtacaaccactttatgacaactttctctctcatactcac 13734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 26791317 - 26791279
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  26791317 aagagaaataatatttgaacaaccattttttacaacttt 26791279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 39458662 - 39458720
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||| ||||||||||||| ||  |||||| ||||| |||||||||||||||||||||||    
T  39458662 ttattagagaaatgatatctgtacaaccagtttttgacaactttctctctcatactcac 39458720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 1839401 - 1839352
Alignment:
Q  294 aaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  1839401 aaatgatatttgaacatccattttgtgacaactttctctctcatactcac 1839352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 6865848 - 6865795
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  6865848 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 6865795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 8725483 - 8725430
Alignment:
Q  290 agagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||| |||||||  |||||| ||| |||||||||||||||||||||||||    
T  8725483 agagaaattatatttgtacaaccactttattacaactttctctctcatactcac 8725430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 12878754 - 12878803
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcata 337  Q
    |||||||||||||||||  |||||||||| ||| ||||||||||||||||    
T  12878754 aagagaaatgatatttgtacaaccattttattataactttctctctcata 12878803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 15479464 - 15479505
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||| |||||||||||||||| ||| ||||||||||||||||    
T  15479464 tatatgagaaatgatatttgaacaatcattttttacaacttt 15479505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 16553538 - 16553567
Alignment:
Q  313 attttttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||||||||||||||    
T  16553538 attttttacaactttctctctcatactcac 16553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 18258865 - 18258828
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  18258865 agagaaatgatatttgaacaaccattttttataacttt 18258828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 19522071 - 19522038
Alignment:
Q  294 aaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||| ||||||||||||||||||||    
T  19522071 aaatgatatttgaacaaccattttttacaacttt 19522038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 21210833 - 21210878
Alignment:
Q  294 aaatgatatttgagcaaccatttttt-acaactttctctctcatac 338  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||    
T  21210833 aaatgatatttgaacaaccactttttgacaactttctctctcatac 21210878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 43153121 - 43153068
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||| |||||| ||||||||||||||||||| ||||    
T  43153121 agagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcac 43153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 3634529 - 3634557
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  3634529 ttttttacaactttctctctcatactcac 3634557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 12401227 - 12401255
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  12401227 ttttttacaactttctctctcatactcac 12401255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 22649732 - 22649700
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaa 323  Q
    |||||||||||||||| ||||||||||||||||    
T  22649732 gagaaatgatatttgaacaaccattttttacaa 22649700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 36609151 - 36609236
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaa 246  Q
    |||||| |||||| | |||||||||  ||||||||||||||| ||||| |||||       |||||| |||||||| |||||||||    
T  36609151 ttttataaaagtttgtgtaattagtacattgaaaattgaaaactttgatatttttgaagaataattatttaatttagaatgtttaa 36609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 39807785 - 39807753
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaa 323  Q
    |||||||||||||||| ||||||||||||||||    
T  39807785 gagaaatgatatttgaacaaccattttttacaa 39807753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 40341724 - 40341635
Alignment:
Q  125 ccccgagacattaagtaaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacatttt 214  Q
    ||||||| || ||| |||||||||| ||  ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||||    
T  40341724 ccccgaggcactaattaaggaccttaaatcgtaaacttttatgaaagttagtgtaattggtgcattgaaaattgaaaagtttgatatttt 40341635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 30548365 - 30548313
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttg 207  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  30548365 gtaaacttttatgaaagttagtgtaatcagtgtattggaaattgaaaagtttg 30548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 50781636 - 50781577
Alignment:
Q  284 tttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  50781636 tttataagagaaatgatatttgaacatccattttatgacaactttctctctcatactcac 50781577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 51718687 - 51718634
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt--acaactttctctctcatactcac 342  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcac 51718634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 34861229 - 34861327
Alignment:
Q  158 aacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaaggaatgcccc 256  Q
    ||||||||||||| |||| | ||| ||||||||| ||||||||| ||||||||||||       ||||||||||||||| |||| |||| || ||||||    
T  34861229 aacttttatgaaatttagtgaaatcagtgtattggaaattgaaatgtttgacatttttaaaaaataattacttaatttagaatgcttaaagagtgcccc 34861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 46903472 - 46903533
Alignment:
Q  282 tttttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||| |||||||||||||||||  ||||||||||  ||||||||||||||||||||||||    
T  46903472 tttttacaagagaaatgatatttgtacaaccattttgatacaactttctctctcatactcac 46903533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 14983772 - 14983836
Alignment:
Q  279 ccatttttataagagaaatgatatttgagcaacca-ttttttacaactttctctctcatactcac 342  Q
    ||||||||| |||||||||||||||||  |||||| ||||| |||||||||||||||||| ||||    
T  14983772 ccatttttacaagagaaatgatatttgtacaaccactttttaacaactttctctctcatattcac 14983836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 48103450 - 48103398
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactca 341  Q
    |||||||||||||||||| |||| |||| | ||||||||||||||||||||||    
T  48103450 aagagaaatgatatttgaacaactatttgtgacaactttctctctcatactca 48103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 30414872 - 30414927
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  30414872 taagagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcac 30414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 33100805 - 33100844
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  33100805 taagagaaatgatatttgaacaaccattttttacaacttt 33100844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 33358221 - 33358166
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  33358221 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 33358166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 2571633 - 2571671
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2571633 aagagaaatgatatttgaacaaccattttttacaacttt 2571671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 8200085 - 8200139
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  8200085 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 8200139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 8350269 - 8350231
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  8350269 aagagaaatgatatttgaacaaccattttttacaacttt 8350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 40596116 - 40596062
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||||||||||    
T  40596116 aagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcac 40596062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 45272222 - 45272168
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||| ||||| |||||||||||||||||||||||    
T  45272222 aagagaaatgatatttgtacaaccactttttgacaactttctctctcatactcac 45272168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 9931861 - 9931808
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacatttt 214  Q
    |||||| |||||| | ||||||| |||||||||||||||||| |||||||||||    
T  9931861 ttttataaaagtttgtgtaattaatgtattgaaaattgaaaactttgacatttt 9931808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 40053379 - 40053326
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacatttt 214  Q
    ||||||||||||| | ||||| | |||||||||||||||||| |||||||||||    
T  40053379 ttttatgaaagtttgtgtaataaatgtattgaaaattgaaaactttgacatttt 40053326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 48220204 - 48220151
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  48220204 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 48220151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 3159376 - 3159412
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  3159376 gagaaatgatatttgaacaaccattttttacaacttt 3159412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 4040979 - 4040894
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaa 246  Q
    |||| |||||||| | ||||| ||| |||||||||||||||| ||||||| |||       |||||||||||||||||||| ||||    
T  4040979 ttttgtgaaagtttgtgtaataagtatattgaaaattgaaaactttgacacttttatgtaataattacttaatttaaaatgcttaa 4040894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 16252819 - 16252767
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||||||||||| ||||||||||||| ||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcac 16252767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 35369692 - 35369736
Alignment:
Q  283 ttttataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  35369692 ttttttaagagaaatgatatttgaacaatcattttttacaacttt 35369736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 37685331 - 37685367
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37685331 gagaaatgatatttgaacaaccattttttacaacttt 37685367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 37700187 - 37700151
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37700187 gagaaatgatatttgaacaaccattttttacaacttt 37700151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 40139126 - 40139178
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||  |||||||||| | |||||||||||||||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatactcac 40139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 41507254 - 41507202
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||  |||||||||| | |||||||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcac 41507202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 15083124 - 15083085
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  15083124 taagagaaatgatatttgaacaaccatttttgacaacttt 15083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 19969620 - 19969569
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  19969620 agaaatgatatttgaacatccattttatgacaactttctctctcatactcac 19969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 27687582 - 27687527
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||||||| | |||||||| ||||||||||||||    
T  27687582 taagagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcac 27687527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 44632537 - 44632592
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||| || ||||||  | |||||||||||||||||||||||    
T  44632537 taagagaaatgatatttgaacatccatttggtgacaactttctctctcatactcac 44632592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 45065960 - 45065909
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  45065960 agaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 45065909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 50460771 - 50460720
Alignment:
Q  292 agaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcac 50460720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 3982104 - 3982066
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  3982104 aagagaaatgatatttgaacaacctttttttacaacttt 3982066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 11121490 - 11121544
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||| | |||| ||||||||||||||||||||||||    
T  11121490 aagagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcac 11121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 31043085 - 31043002
Alignment:
Q  163 ttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaa 246  Q
    ||||||||||| | ||||| | || ||||||||||||||| |||||||||||       ||||||||||||||| |||| ||||    
T  31043085 ttatgaaagtttgtgtaatcaatgcattgaaaattgaaaactttgacatttttaaaaaataattacttaatttagaatgcttaa 31043002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 33791759 - 33791834
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaattta 236  Q
    ||||||||||||| | |||||  |||||||| |||||||||| |||||||||||       |||||||||||||||    
T  33791759 ttttatgaaagtttgtgtaatcggtgtattggaaattgaaaaatttgacattttaaaagaataattacttaattta 33791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 43612142 - 43612092
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatac 338  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||||||    
T  43612142 aagagaaatgatatttgtacaaccattttatgacaactttctctctcatac 43612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 48947290 - 48947195
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaaggaatgcccc 256  Q
    |||||||||| || | ||||| |||| |||| |||||||||| |||||||||||       |||||||||||||||  ||| |||| |||||||||    
T  48947290 ttttatgaaaatttgtgtaatcagtgcattggaaattgaaaactttgacatttttaaaaaataattacttaatttagtatgcttaaagaatgcccc 48947195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 49453489 - 49453543
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  49453489 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 49453543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 50797789 - 50797843
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||| |||||| | |||||||||||||||||||||||    
T  50797789 aagagaaatgatatttgtacaatcattttgtgacaactttctctctcatactcac 50797843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 16114005 - 16113952
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacatttt 214  Q
    ||||||||||||| | ||||| |||| |||| |||||||||| |||||||||||    
T  16114005 ttttatgaaagtttgtgtaatcagtgcattggaaattgaaaactttgacatttt 16113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 21446283 - 21446226
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||||   ||| ||||||  ||||||||||||||||||||||||    
T  21446283 tataagagaaatgatatttatacaatcattttagtacaactttctctctcatactcac 21446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 30735361 - 30735328
Alignment:
Q  294 aaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||| ||||||||||||||||||||    
T  30735361 aaatgatatttgaacaaccattttttacaacttt 30735328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 35030822 - 35030773
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatact 339  Q
    |||||||| ||||||  ||||||||||| |||||||||||||||||||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatact 35030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 36954669 - 36954721
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||| |||||| |||||||||| ||||||||||||    
T  36954669 aagagaaatgatatttgtacaac-atttttgacaactttctttctcatactcac 36954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 43757598 - 43757651
Alignment:
Q  290 agagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||||||||||  ||||||||||||| ||||||||||    
T  43757598 agagaaatgatatttgtacaaccattttgatacaactttctctttcatactcac 43757651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 45333569 - 45333606
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  45333569 agagaaatgatatttgaacaatcattttttacaacttt 45333606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 48872088 - 48872043
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctca 335  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctctctca 48872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 49241565 - 49241512
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||| ||| | |||||||||||||||||||||||    
T  49241565 agagaaatgatatttgaacatccactttgtgacaactttctctctcatactcac 49241512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 48900 - 48981
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaattta 236  Q
    ||||| ||||||||||||| | |||||  ||| ||||||||||||||| ||| |||||||       |||||||||||||||    
T  48900 gtaaatttttatgaaagtttgtgtaatcggtgcattgaaaattgaaaacttttacatttttcaagaataattacttaattta 48981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 10385421 - 10385469
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccatttt-ttacaactttctctc 332  Q
    |||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  10385421 ttataagagaaatgatatttgtacaaccattttgctacaactttctctc 10385469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 12657218 - 12657254
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaa 323  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  12657218 ataagagaaatgatatttgaacaatcattttttacaa 12657254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 18336158 - 18336210
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||| ||  |||||| | |||||||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcattttgtgacaactttctctctcatactcac 18336210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 18610808 - 18610836
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  18610808 ttttttacaactttctctctcatactcac 18610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 23645411 - 23645447
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||  ||||||||||||||||||||    
T  23645411 gagaaatgatatttggacaaccattttttacaacttt 23645447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 27465128 - 27465092
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||| | ||||||||||||||||||||    
T  27465128 gagaaatgatatttaaacaaccattttttacaacttt 27465092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 37275104 - 37275068
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  37275104 gagaaatgatatttgaacaaccattttttataacttt 37275068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 42539414 - 42539470
Alignment:
Q  287 ataagagaaatgatatttgagcaaccatt-ttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||  |||||||| | | |||||||||||||||| ||||||    
T  42539414 ataagagaaatgatatttgtacaaccattatgtgacaactttctctctcagactcac 42539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 47398511 - 47398459
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||| ||  |||||||| |||| ||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactcac 47398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 48325846 - 48325786
Alignment:
Q  283 ttttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||| |||||||||||||||||  |||||||||| | |||| ||||| ||||||||||||    
T  48325846 ttttaaaagagaaatgatatttgtacaaccattttgtgacaattttctatctcatactcac 48325786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 50726323 - 50726283
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| | |||| |||||||||||||||    
T  50726323 ataagagaaatgatatttcaacaactattttttacaacttt 50726283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 9647143 - 9647194
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaactttctctctcatactca 341  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9647143 agagaaatgatatttgaacaactattttttacaactttctctctcatactca 9647194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 37738036 - 37737985
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  37738036 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactcac 37737985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 27696020 - 27695975
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaactttctctct 333  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  27696020 taagagaaatgatatttgaacaaccatttttgacaactttctctct 27695975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 3012916 - 3012856
Alignment:
Q  280 catttttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatact 339  Q
    ||||||| ||||||||||||||||||| || ||||||| | ||||||||||||||||||||    
T  3012916 catttttttaagagaaatgatatttgaacatccattttgtgacaactttctctctcatact 3012856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 10060494 - 10060443
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaactttctctctcatactca 341  Q
    |||| |||||||||||| ||||||||||| |||||||| |||||||||||||    
T  10060494 agagcaatgatatttgaacaaccatttttaacaactttatctctcatactca 10060443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 40874908 - 40874816
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattg-aaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaa 246  Q
    ||||||||||||||||||||| |  |||||||  |||||||||| |||||||| |||||||       |||||||||||||||||| ||||||    
T  40874908 gtaaacttttatgaaagttagtgccattagtgcgttgaaaattgaaaaagtttaacatttttaaaaaataattacttaatttaaaaagtttaa 40874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 6646833 - 6646887
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  6646833 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 6646887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 29795441 - 29795499
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||  |||||||||| | ||||||||||||| |||||||||    
T  29795441 ttataagagaaatgatatttgtacaaccattttgtgacaactttctctcacatactcac 29795499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 6511250 - 6511287
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  6511250 agagaaatgatatttgaacaaccattttttacaacttt 6511287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 8087010 - 8086944
Alignment:
Q  192 aaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaaggaatgccccga 258  Q
    ||||||||||||||| |||||||       |||||| ||||||||||||||||| ||||||||||||    
T  8087010 aaaattgaaaagtttaacatttttaaaaaataattatttaatttaaaatgtttacggaatgccccga 8086944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 18254281 - 18254244
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  18254281 agagaaatgatatttgaacaaccattttttacaacttt 18254244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 6049407 - 6049352
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt--ttacaactttctctctcatactcac 342  Q
    |||||||||||||||||| ||||||||||  | | |||||||||||||||||||||    
T  6049407 aagagaaatgatatttgatcaaccatttttgtgataactttctctctcatactcac 6049352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 9760017 - 9760053
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  9760017 gagaaatgatatttgaacaaccattttttacaacttt 9760053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 21277644 - 21277560
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaat 240  Q
    |||||||||||| |||||||  ||||| |||| |||| || |||||||||||||||||||       |||||||||||||||||||    
T  21277644 gtaaacttttataaaagttactgtaatcagtgcattgcaa-ttgaaaagtttgacattttaaaaaaataattacttaatttaaaat 21277560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 24727426 - 24727478
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||||||||||  ||||||||||||||||||||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcac 24727478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 45202192 - 45202140
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcac 45202140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 33737396 - 33737341
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||| | |||||||| | |||| ||||||||||||||||||    
T  33737396 taagagaaatgatatttgaactaccattttgtgacaaatttctctctcatactcac 33737341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 11828882 - 11828828
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||| ||||||||||||  ||||||||||| ||||||||||||||||||| ||||    
T  11828882 aagataaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 19633295 - 19633333
Alignment:
Q  296 atgatatttgagcaaccattttttacaactttctctctc 334  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  19633295 atgatatttgaacaactattttttacaactttctctctc 19633333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 19830196 - 19830234
Alignment:
Q  296 atgatatttgagcaaccattttttacaactttctctctc 334  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  19830196 atgatatttgaacaactattttttacaactttctctctc 19830234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 27490803 - 27490765
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  27490803 aagagaaatgatatttgaacaaccatttttgacaacttt 27490765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 27538982 - 27538924
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||| |||||||||||||||  ||||||||||| ||||||||||||| | ||||||||    
T  27538982 ttatatgagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcac 27538924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 28013965 - 28014019
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||| |||||||  |||||| ||||| |||||||||||||||||||||||    
T  28013965 aagagaaattatatttgtacaaccaatttttgacaactttctctctcatactcac 28014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 32972968 - 32972914
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||| ||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  32972968 aagataaatgatatttgaacatccattttgtgacaactttctctctcatactcac 32972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 42081046 - 42081100
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  || ||| ||||| |||||||||||||||||||||||    
T  42081046 aagagaaatgatatttgtacagccactttttgacaactttctctctcatactcac 42081100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 2971876 - 2971823
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactca 341  Q
    |||||||| ||||||||| || ||||||| | ||||||||||||||||||||||    
T  2971876 aagagaaaagatatttgaacatccattttgtgacaactttctctctcatactca 2971823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 4263925 - 4263872
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||||  ||||| |||||||||||| ||||||||||    
T  4263925 aagagaaatgatatttgtacaacattttttgacaactttctctttcatactcac 4263872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 6885549 - 6885488
Alignment:
Q  282 tttttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||| ||||||||||||| ||||  |||| |||||| ||||| ||||||||||||||||||    
T  6885549 tttttttaagagaaatgatttttgtacaactatttttatacaattttctctctcatactcac 6885488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 9207589 - 9207626
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  9207589 agagaaatgatatttgaacaatcattttttacaacttt 9207626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 22296190 - 22296137
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||||||||||| ||||| ||||||||| ||||||||    
T  22296190 agagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcac 22296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 41042253 - 41042290
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  41042253 agagaaatgatatttgaacaaccatttttaacaacttt 41042290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 42678760 - 42678813
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||||||  | |||||||||||||||||||||||    
T  42678760 agagaaatgatatttgaacatccatttagtgacaactttctctctcatactcac 42678813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 2076569 - 2076605
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  2076569 gagaaacgatatttgaacaaccattttttacaacttt 2076605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 4138249 - 4138193
Alignment:
Q  287 ataagagaaatgatatttgagcaaccatttttta-caactttctctctcatactcac 342  Q
    |||||||||||||||||||   ||| ||||| || ||||||||||||||||||||||    
T  4138249 ataagagaaatgatatttgtataactattttctaacaactttctctctcatactcac 4138193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 4723601 - 4723629
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  4723601 ttttttacaactttctctctcatactcac 4723629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 7121390 - 7121442
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttta-caactttctctctcatactcac 342  Q
    |||||||||||||||   ||||||||| || ||||||||||||||||||||||    
T  7121390 gagaaatgatatttgtataaccattttgtaacaactttctctctcatactcac 7121442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 8757555 - 8757607
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||| ||||||  ||||||||||| ||||||||| ||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcac 8757607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 10550520 - 10550468
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactca 341  Q
    ||||||||||||| ||  |||| ||||||| ||||||||||||||||||||||    
T  10550520 agagaaatgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 17999735 - 17999691
Alignment:
Q  292 agaaatgatatttgagcaaccattttttacaactttctctctcat 336  Q
    |||||||||| |||  |||||||||| ||||||||||||||||||    
T  17999735 agaaatgatacttgtacaaccattttgtacaactttctctctcat 17999691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 37284914 - 37284991
Alignment:
Q  169 aagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaa 246  Q
    ||||| ||||||||| || ||||||||||||||| ||| | |||||       ||||||||||||||||||| |||||    
T  37284914 aagtttgcgtaattattgcattgaaaattgaaaaatttaagatttttaaaaaataattacttaatttaaaatatttaa 37284991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 38600825 - 38600877
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||| ||  || ||||||||| |||||||||||||||||||||||    
T  38600825 gagaaatgatatatgtacatccattttttgacaactttctctctcatactcac 38600877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 42421969 - 42421933
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||| || ||||||||||||||||||||    
T  42421969 gagaaatgatattcgaacaaccattttttacaacttt 42421933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 42554811 - 42554839
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  42554811 ttttttacaactttctctctcatactcac 42554839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 43205103 - 43205156
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||  ||||  |||| |||||| |||||||||||||||||    
T  43205103 ataagagaaatgatatttgtacaac--ttttgtacaacattctctctcatactcac 43205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 44287511 - 44287475
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| |||| |||||||||||||||    
T  44287511 gagaaatgatatttgaacaactattttttacaacttt 44287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 46686243 - 46686296
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  46686243 aagagaaatgatatttgtacaaccattttgtacaactttctctctcatactcac 46686296  T

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Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 39605978 - 39606030
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  39605978 agagaaatgatatatgaacaaccatttttgacaactttctctctcatactcac 39606030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 5386385 - 5386436
Alignment:
Q  292 agaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcac 5386436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 38354495 - 38354554
Alignment:
Q  155 gtaaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacatttt 214  Q
    |||||||||||| |||||||| ||||| ||||||||  ||||||||||||||||||||||    
T  38354495 gtaaacttttattaaagttagtgtaatcagtgtattagaaattgaaaagtttgacatttt 38354554  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 28657506 - 28657448
Alignment:
Q  285 ttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  28657506 ttataagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 28657448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 1868957 - 1868901
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  1868957 ataagagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcac 1868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 24310581 - 24310529
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcac 24310529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 37297045 - 37297085
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  37297045 ataagagaaatgatatttgaacaaccattttttacaacttt 37297085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 50617578 - 50617497
Alignment:
Q  165 atgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaa 246  Q
    ||||||||||| | ||| |||| ||| |||||||||||||||||||||||       ||||||||||||||| |||||||||    
T  50617578 atgaaagttagtgcaatcagtgcattaaaaattgaaaagtttgacattttaaaaaaataattacttaatttataatgtttaa 50617497  T

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Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 22889351 - 22889251
Alignment:
Q  156 taaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaaggaatgccc 255  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||| ||| |||||||        |||||||||||||| || |||||| || |||||    
T  22889351 taaacttttatgaaagttagagtaactggtgcattgaaaattgaaaaatttaacatttttaaaaaacaattacttaatttagaaagtttaaagagtgccc 22889252  T
Q  256 c 256  Q
    |    
T  22889251 c 22889251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 22941015 - 22940915
Alignment:
Q  156 taaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaatttaaaatgtttaaggaatgccc 255  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||| ||| |||||||        |||||||||||||| || |||||| || |||||    
T  22941015 taaacttttatgaaagttagagtaactggtgcattgaaaattgaaaaatttaacatttttaaaaaacaattacttaatttagaaagtttaaagagtgccc 22940916  T
Q  256 c 256  Q
    |    
T  22940915 c 22940915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 23369406 - 23369367
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  23369406 taagagaaatgatatttgaacaaccattttttacaacttt 23369367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 43174982 - 43175020
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43174982 aagagaaatgatatttgaacaaccattttttacaacttt 43175020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 43769721 - 43769775
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  43769721 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 43769775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 29531677 - 29531640
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  29531677 agagaaatgatatttgaacaaccattttttacaacttt 29531640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 31657657 - 31657710
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  31657657 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 31657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 36177905 - 36177942
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  36177905 agagaaatgatatttgaacaaccattttttacaacttt 36177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 42490919 - 42490972
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||||| ||||| |||||||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcac 42490972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 5622458 - 5622494
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5622458 gagaaatgatatttgaacaaccattttttacaacttt 5622494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  290 agagaaatgatatttgagcaaccatttt-ttacaactttctctctcata 337  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 37997256 - 37997292
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37997256 gagaaatgatatttgaacaaccattttttacaacttt 37997292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 39440484 - 39440520
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  39440484 gagaaatgatatttgaacaaccattttttacaacttt 39440520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 51255735 - 51255783
Alignment:
Q  280 catttttataagagaaatgatatttgagcaaccatttttt-acaacttt 327  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  51255735 cattattataagagaaatgatatttgaacaaccattttttgacaacttt 51255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 4106050 - 4106105
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||  |||   |||||||||| ||||||||||||||||||    
T  4106050 ataagagaaatgatatttgtacaatttttttttacaattttctctctcatactcac 4106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 31413848 - 31413797
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatact 339  Q
    |||||||||||||||||  |||| |||||| |||||||||||||||||||||    
T  31413848 aagagaaatgatatttgtacaactatttttgtacaactttctctctcatact 31413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 4511823 - 4511877
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||   ||||||||| | |||||||||||||||||||||||    
T  4511823 aagagaaatgatatttgtataaccattttatgacaactttctctctcatactcac 4511877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 37022270 - 37022324
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||||||||||  ||||||||| ||||||||||||||    
T  37022270 aagagaaatgatatttgtacaaccattttgatacaactttatctctcatactcac 37022324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 38134351 - 38134385
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaa 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  38134351 aagagaaatgatatttgaacaaccattttttacaa 38134385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 2109442 - 2109495
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||||||| |||| |||||||||||| ||||||||||    
T  2109442 agagaaatgatatttgtacaaccatcttttgacaactttctctttcatactcac 2109495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 7146193 - 7146144
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcata 337  Q
    |||||||||||||||||| |||||||||||  |||||||| |||||||||    
T  7146193 aagagaaatgatatttgaacaaccatttttaaacaactttttctctcata 7146144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 7795025 - 7795074
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatact 339  Q
    |||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  7795025 gagaaatgatatttgtacaaccatttttgtacaactttctttctcatact 7795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 9828044 - 9827991
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||||| ||||||    
T  9828044 agagaaatgatatttgtacaaccattttagtacaactttctctctcacactcac 9827991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 22072263 - 22072312
Alignment:
Q  294 aaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||| ||| |||||| |||||||||| ||||||||||||||    
T  22072263 aaatgatatttgaacaatcattttgttacaactttttctctcatactcac 22072312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 26718379 - 26718432
Alignment:
Q  290 agagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||||||| | |||| ||||||||||||||||||    
T  26718379 agagaaatgatatttgaacatccattttatgacaattttctctctcatactcac 26718432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 26731007 - 26731060
Alignment:
Q  290 agagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||| || ||||||| | |||| ||||||||||||||||||    
T  26731007 agagaaatgatatttgaacatccattttatgacaattttctctctcatactcac 26731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 27748531 - 27748482
Alignment:
Q  156 taaacttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtt 205  Q
    |||||||||||||||||||| |||||   | |||||||||||||||||||    
T  27748531 taaacttttatgaaagttagtgtaatcgatatattgaaaattgaaaagtt 27748482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 32621637 - 32621690
Alignment:
Q  290 agagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||||||||| | |||||||||||||| ||||||||    
T  32621637 agagaaatgatatttgcacaaccattttgtgacaactttctctctaatactcac 32621690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 45082980 - 45083017
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  45082980 agagaaatgatatttgaacaaccatttttgacaacttt 45083017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 48494973 - 48494924
Alignment:
Q  290 agagaaatgatatttgagcaacca-ttttttacaactttctctctcatac 338  Q
    ||||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  48494973 agagaaatgatatttgaacaaccactttttaacaactttatctctcatac 48494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 54036591 - 54036538
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactca 341  Q
    |||||||||||||||||  |||||||||| | |||||||| |||||||||||||    
T  54036591 aagagaaatgatatttgtacaaccattttgtgacaactttatctctcatactca 54036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 1688464 - 1688436
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  1688464 ttttttacaactttctctctcatactcac 1688436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 338
Target Start/End: Original strand, 4974111 - 4974159
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttta-caactttctctctcatac 338  Q
    |||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatac 4974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 10250586 - 10250550
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| |||| |||||||||||||||    
T  10250586 gagaaatgatatttgaacaactattttttacaacttt 10250550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 32365727 - 32365675
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||  |||||||||| | |||||||||||||||||| ||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatattcac 32365675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 37731926 - 37731978
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||| ||||||  ||||||||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcac 37731978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 39241361 - 39241309
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatactcac 39241309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 41347527 - 41347475
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||| |||||||  ||| ||||||| ||||||||||||||||| |||||    
T  41347527 agagaaattatatttgtacaatcatttttgacaactttctctctcatgctcac 41347475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 320
Target Start/End: Original strand, 44539733 - 44539765
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttta 320  Q
    ||||||||||||||||||| |||||||||||||    
T  44539733 taagagaaatgatatttgaacaaccatttttta 44539765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 45277117 - 45277089
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  45277117 ttttttacaactttctctctcatactcac 45277089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 46173546 - 46173602
Alignment:
Q  287 ataagagaaatgatatttgagcaacca-ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||  |||||| ||| | ||||||||||||||| |||||||    
T  46173546 ataagagaaatgatatttgtacaaccactttgtgacaactttctctctcgtactcac 46173602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 46634100 - 46634136
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  46634100 gagaaatgatatttgaacaatcattttttacaacttt 46634136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 50608696 - 50608632
Alignment:
Q  278 accatttttataagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||| ||||  ||||||| |||||||| |||  |||||| |||||||||||| ||||||||||    
T  50608696 accattgttatttgagaaattatatttgaacaattatttttgacaactttctctttcatactcac 50608632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 56379427 - 56379455
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  56379427 ttttttacaactttctctctcatactcac 56379455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 19149000 - 19149053
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  19149000 aagagaaatgatatttgaacaatcattttttataactttctctctcatactcac 19149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 29846954 - 29846899
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  29846954 taagagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcac 29846899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 28700471 - 28700524
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttttgacaactttatctctcatactcac 28700524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 3484770 - 3484822
Alignment:
Q  291 gagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  3484770 gagaaatgatatttgtccaaccattttattacaactttctctctcatactcac 3484822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 29057659 - 29057711
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcac 29057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 23907050 - 23906995
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||||| | |||||||||||||||||||||||||    
T  23907050 taagagaaatgatatttgtacaaccattatgttacaactttctctctcatactcac 23906995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 46952947 - 46953001
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||  |||||||||||| | |||||||||||||||||||||    
T  46952947 aagagaaatgatatttgtacaaccattttttgataactttctctctcatactcac 46953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 49761317 - 49761371
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  49761317 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 49761371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 50745558 - 50745612
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||    
T  50745558 aagagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcac 50745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 27541574 - 27541537
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27541574 agagaaatgatatttgaacaaccattttttacaacttt 27541537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 35368621 - 35368674
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcac 35368674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 46623906 - 46623943
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  46623906 agagaaatgatatttgaacaaccattttttacaacttt 46623943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 47683800 - 47683853
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||||||||| | |||||||||||||||||||||||    
T  47683800 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcac 47683853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 48490574 - 48490521
Alignment:
Q  290 agagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||||| |||| ||||||||||||||||||||||||    
T  48490574 agagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcac 48490521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 52939652 - 52939689
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  52939652 agagaaatgatatttgaacaaccattttttacaacttt 52939689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 55361298 - 55361241
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattt-tttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||||  ||||||||| || |||||||||||||| ||||||||    
T  55361298 tataagagaaatgatatttgtacaaccatttcttgacaactttctctcttatactcac 55361241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 26014812 - 26014848
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  26014812 gagaaatgatatttgaacaaccattttttacaacttt 26014848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 38957572 - 38957520
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||| |||||| |||||||| ||||||||||||||    
T  38957572 agagaaatgatatttgtacaactatttttgacaactttttctctcatactcac 38957520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 48117343 - 48117399
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||||||||||||||||   ||||||||||| ||||||||||||| ||||||||||    
T  48117343 ataagagaaatgatatttatacaaccatttttgtacaactttctctttcatactcac 48117399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 49361903 - 49361843
Alignment:
Q  283 ttttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    ||||| |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||||||    
T  49361903 ttttaaaagagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcac 49361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 1765393 - 1765452
Alignment:
Q  280 catttttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatac 338  Q
    ||||||||||||||||||||||||||  ||  |||||| | |||||||||||||||||||    
T  1765393 catttttataagagaaatgatatttgtacattcattttgtgacaactttctctctcatac 1765452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 338
Target Start/End: Original strand, 32205607 - 32205654
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaactttctctctcatac 338  Q
    |||||||||||||||| ||| ||| |||||||||||| ||||||||||    
T  32205607 gagaaatgatatttgaacaatcatgttttacaactttatctctcatac 32205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 42357150 - 42357115
Alignment:
Q  292 agaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||| ||||||||||||||||||||    
T  42357150 agaaatgatatttgaacaaccattttttacaacttt 42357115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 43169816 - 43169761
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||||||| | |||||||| ||||||||||||||    
T  43169816 taagagaaatgatatttgtacaaccattttgtgacaactttttctctcatactcac 43169761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 47472330 - 47472365
Alignment:
Q  292 agaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||| ||||||||||||||||||||    
T  47472330 agaaatgatatttgaacaaccattttttacaacttt 47472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 5114076 - 5114110
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttttacaa 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  5114076 aagagaaatgatatttgaacaaccattttttacaa 5114110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 24256830 - 24256780
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaactttctctctcatactca 341  Q
    |||||||||||||||| ||| ||||||| |||| ||||||| |||||||||    
T  24256830 gagaaatgatatttgaacaatcatttttgacaaatttctctatcatactca 24256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Original strand, 38926627 - 38926661
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaac 324  Q
    ||||||||||||||||| |||||||||||||||||    
T  38926627 agagaaatgatatttgaacaaccattttttacaac 38926661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 50318439 - 50318393
Alignment:
Q  294 aaatgatatttgagcaaccattttttacaactttctctctcatactc 340  Q
    |||||| |||||| |||| |||||||| |||||||||||||||||||    
T  50318439 aaatgacatttgaacaactattttttataactttctctctcatactc 50318393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 7668267 - 7668222
Alignment:
Q  282 tttttataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||| || |||||||||||||||| ||| ||||||||||||||||    
T  7668267 tttttttaggagaaatgatatttgaacaatcattttttacaacttt 7668222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 23377978 - 23378019
Alignment:
Q  287 ataagagaaatgatatttgagcaaccatttt-ttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  23377978 ataagagaaatgatatttgtgcaaccattttcttacaacttt 23378019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 36671086 - 36671053
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaa 323  Q
    ||||||||||||||||| ||||||||||||||||    
T  36671086 agagaaatgatatttgaacaaccattttttacaa 36671053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 37453198 - 37453235
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  37453198 agagaaatgatatttgaacaaccatttttaacaacttt 37453235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 45758015 - 45757962
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacatttt 214  Q
    ||||||||||||| | ||||| |||| |||| |||||||||| |||||||||||    
T  45758015 ttttatgaaagtttgtgtaatcagtgcattgtaaattgaaaactttgacatttt 45757962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 5244229 - 5244265
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  5244229 gagaaatgatatttgaacaaccatattttacaacttt 5244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 16129526 - 16129558
Alignment:
Q  295 aatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||| ||||||||||||||||||||    
T  16129526 aatgatatttgaacaaccattttttacaacttt 16129558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 37302546 - 37302582
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||| | ||||||||||||||||||||    
T  37302546 gagaaatgatattttaacaaccattttttacaacttt 37302582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 44937215 - 44937271
Alignment:
Q  287 ataagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||||||  |||| ||||||| |||||||||||| | ||||||||    
T  44937215 ataagagaaatgatatttgtacaacaattttttgacaactttctcttttatactcac 44937271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 50876423 - 50876371
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactca 341  Q
    ||||||||||||||||  |||| ||||||| |||||||||||| |||||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttctctatcatactca 50876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 52254209 - 52254173
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| |||||||| |||||||||||    
T  52254209 gagaaatgatatttgaacaaccattgtttacaacttt 52254173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 52326019 - 52326055
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||  |||||||||||||||||||    
T  52326019 gagaaatgatatttgaataaccattttttacaacttt 52326055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 31663 - 31608
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  31663 taagagaaatgatatttgtacaaccattttttgacaactttctctctcatactcac 31608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 21130804 - 21130729
Alignment:
Q  140 taaggaccttcaactgtaaacttttatgaaagttagcgtaattagtgtattgaaaatt-gaaaagtttgacatttt 214  Q
    |||||||||| ||  ||||||||||||||||||| | | |||||||||||||||||||  ||||||||||||||||    
T  21130804 taaggaccttaaatagtaaacttttatgaaagttggtgcaattagtgtattgaaaattaaaaaagtttgacatttt 21130729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 22079639 - 22079598
Alignment:
Q  286 tataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  22079639 tataagagaaatgatatttgaacaaccattttttacaacttt 22079598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 1156717 - 1156757
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  1156717 ataagagaaatgatatttgaacaaccattttttacaacttt 1156757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 18737626 - 18737578
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaactttctctctcatact 339  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  18737626 gagaaatgatatttgaacaaccattttttataactttttctctcatact 18737578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 17442823 - 17442885
Alignment:
Q  281 atttttataagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||| |||||||||| |||||||  ||||||||||| ||||||||||||||| ||||||||    
T  17442823 atttttttaagagaaataatatttgtacaaccatttttgtacaactttctctcttatactcac 17442885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 28748121 - 28748175
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactca 341  Q
    ||||||||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  28748121 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 28748175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 2165362 - 2165310
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactc 340  Q
    |||||||||||||||||  ||||||||||| ||||||||| ||||||||||||    
T  2165362 aagagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 2176995 - 2176943
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactc 340  Q
    |||||||||||||||||  ||||||||||| ||||||||| ||||||||||||    
T  2176995 aagagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 8098666 - 8098630
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8098666 gagaaatgatatttgaacaaccattttttacaacttt 8098630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 25811909 - 25811873
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  25811909 gagaaatgatatttgaacaaccattttttacaacttt 25811873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 32644623 - 32644675
Alignment:
Q  291 gagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    |||||||||||||||  |||| ||||||| |||||||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcac 32644675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 34047387 - 34047423
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||| ||||||||||||||||||||    
T  34047387 gagaaatgatatttgaacaaccattttttacaacttt 34047423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 15974621 - 15974671
Alignment:
Q  291 gagaaatgatatttgagcaaccattttttacaactttctctctcatactcac 342  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||| ||||    
T  15974621 gagaaatgatatttgaacaac-atttgttacaactttctctctcatattcac 15974671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 25567553 - 25567498
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||| |  ||||||||||| ||||||||| ||||||||||||||    
T  25567553 taagagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcac 25567498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 31517243 - 31517188
Alignment:
Q  288 taagagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||||  |||||| ||||| |||||||| ||||||||||||||    
T  31517243 taagagaaatgatatttgtacaaccactttttgacaactttttctctcatactcac 31517188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 2060695 - 2060641
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||||||||||||||||  ||||||||| | |||||||| ||||||||||||||    
T  2060695 aagagaaatgatatttgaataaccattttatgacaactttttctctcatactcac 2060641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 5028335 - 5028273
Alignment:
Q  281 atttttataagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatactcac 342  Q
    ||||| |||||||||||||||||| | || ||||||| | |||||||||||||| ||||||||    
T  5028335 attttaataagagaaatgatatttaaacatccattttgtgacaactttctctcttatactcac 5028273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 16121163 - 16121212
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatact 339  Q
    |||||||||||||||  ||||||||||| ||||||||||||| |||||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatact 16121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 32317000 - 32316963
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  32317000 agagaaatgatatttgaacaactattttttacaacttt 32316963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 552792 - 552828
Alignment:
Q  290 agagaaatgatatttgagcaaccattttttacaactt 326  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  552792 agagaaatgatatttgaacaaacattttttacaactt 552828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 9395397 - 9395345
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  |||| |||||| ||||||||||||| ||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcac 9395345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 25554280 - 25554308
Alignment:
Q  314 ttttttacaactttctctctcatactcac 342  Q
    |||||||||||||||||||||||||||||    
T  25554280 ttttttacaactttctctctcatactcac 25554308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 32135491 - 32135439
Alignment:
Q  291 gagaaatgatatttgagcaaccattttt-tacaactttctctctcatactcac 342  Q
    |||||||||||||||  ||| ||||||| ||||||||||||| ||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcac 32135439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 17047 - 17099
Alignment:
Q  289 aagagaaatgatatttgagcaaccattttt-tacaactttctctctcatactc 340  Q
    |||||||||||||||||  ||||||||||| ||||||||| ||||||||||||    
T  17047 aagagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 165469 - 165509
Alignment:
Q  287 ataagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  165469 ataagagaaatgatatttgaacaaccatttttaacaacttt 165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 44784 - 44835
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttt-ttacaactttctctctcatact 339  Q
    |||||||||||||||||| || ||||||| | ||||||||||||||||||||    
T  44784 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatact 44835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 49292 - 49331
Alignment:
Q  288 taagagaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  49292 taagagaaatgatatttgaacaaccattttttataacttt 49331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 35524 - 35559
Alignment:
Q  292 agaaatgatatttgagcaaccattttttacaacttt 327  Q
    ||||||||||||||| ||||||||||||||||||||    
T  35524 agaaatgatatttgaacaaccattttttacaacttt 35559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 26787 - 26712
Alignment:
Q  161 ttttatgaaagttagcgtaattagtgtattgaaaattgaaaagtttgacattttnnnnnnntaattacttaattta 236  Q
    ||||| ||||||| | ||||| |||| ||||||||||||||| |||||||||||       |||||||||||||||    
T  26787 ttttacgaaagtttgtgtaatcagtgcattgaaaattgaaaactttgacattttaaaataataattacttaattta 26712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 3332 - 3279
Alignment:
Q  290 agagaaatgatatttgagcaaccatttttt-acaactttctctctcatactcac 342  Q
    ||||||||||||||||  |||||| ||| | |||||||||||||||||||||||    
T  3332 agagaaatgatatttgtacaaccactttctcacaactttctctctcatactcac 3279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 18352 - 18297
Alignment:
Q  289 aagagaaatgatatttgagcaaccatttttt--acaactttctctctcatactcac 342  Q
    |||||||||||||||||  ||||| ||||||  |||||||| ||||||||||||||    
T  18352 aagagaaatgatatttgtacaaccttttttttgacaactttatctctcatactcac 18297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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