View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9001_low_92 (Length: 230)
Name: NF9001_low_92
Description: NF9001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9001_low_92 |
 | |
|
| [»] scaffold1348 (1 HSPs) |
| | |
|
| [»] scaffold0119 (2 HSPs) |
| | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0053 (1 HSPs) |
| | |
|
| [»] scaffold0352 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
| [»] scaffold0067 (1 HSPs) |
| | |
|
| [»] scaffold0360 (1 HSPs) |
| | |
|
| [»] scaffold0631 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 34)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 23839925 - 23839987
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23839925 |
gaacctgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
23839987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 29659273 - 29659218
Alignment:
| Q |
17 |
tgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29659273 |
tgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
29659218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 10639660 - 10639606
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10639660 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
10639606 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 33083608 - 33083554
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33083608 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
33083554 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 37197664 - 37197610
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37197664 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
37197610 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 34460444 - 34460497
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34460444 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
34460497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 42578243 - 42578296
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42578243 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
42578296 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 45125218 - 45125165
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45125218 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
45125165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 26605698 - 26605752
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26605698 |
gacctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaagac |
26605752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 19537382 - 19537435
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
19537382 |
acctcacagttgtgtgtgtgtttattttcagtggattaccacttcatctaagac |
19537435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 11708752 - 11708803
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11708752 |
gacctcacagttgtgtgtgggtttattttcagtggattaccacttcatctaa |
11708803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 11459789 - 11459843
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11459789 |
gacctcacagttgtgtgtgtgtttattttcaatggattaccacttcatctaagac |
11459843 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 43778518 - 43778468
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
43778518 |
tcacagttgtgtgtgagtttattttcattggattaccacttcatctaagac |
43778468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 44181938 - 44181887
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
44181938 |
ctcacagttgtgtgtgagtttattttcagtggattatcacttaatctaagac |
44181887 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4851394 - 4851448
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
4851394 |
gacctcacagttgtgtgtgagtttaattttagtggattaccacttcatccaagac |
4851448 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19048828 - 19048882
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
19048828 |
gacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatctaagac |
19048882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 39831498 - 39831444
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
39831498 |
gacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
39831444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 41696379 - 41696437
Alignment:
| Q |
153 |
agcaaaattttgttattgtttgatcatgtacaaattgcatt-catttgcatcacacaccc |
211 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
41696379 |
agcaaaattttgttattg-ttgatcatgtacaacttgcattgcatttgcatcacacaccc |
41696437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 11816604 - 11816550
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagttt-attttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
11816604 |
acctcacagttgtatgtgagttttaatttcagtggattaccacttcatctaagac |
11816550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 27137972 - 27137918
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| |||||| | |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27137972 |
gaccttacagttttatgtgagtttaatttcagtggattaccacttcatctaagac |
27137918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33001776 - 33001830
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| | |||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
33001776 |
gacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaagac |
33001830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 19816295 - 19816348
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||| |||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
19816295 |
acctcgcagttgtgtatgagtttattttcagtagattacaacttcatctaagac |
19816348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 21312271 - 21312331
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
21312271 |
gaacctgggacctcacaattgtg--tgagtttatttttagtgaattaccacttcatctaagac |
21312331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 43684143 - 43684194
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||| |||| || |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
43684143 |
gaccccacaattatgtgtgagtttattttcactggattaccacttcatctaa |
43684194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 7275940 - 7275886
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||| | |||| ||| | ||||||||||||||||||||||| |
|
|
| T |
7275940 |
gacctcacagttgtgtgtaaatttaattttaatggattaccacttcatctaagac |
7275886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 16654438 - 16654488
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||| || |||||||||| |
|
|
| T |
16654438 |
acctcacagttgtgtgtgagtttatttttagtgaattgccccttcatctaa |
16654488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38440259 - 38440197
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||| || | |||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
38440259 |
gaacctgagacctcctagctatgtgtgagtttaattttagtggattaccacttcatctaagac |
38440197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 39535588 - 39535534
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| | |||||||||| ||| || |||||||||||||||||||||| |
|
|
| T |
39535588 |
gacctcacagttttatgtgagtttaatttgagcggattaccacttcatctaagac |
39535534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 42025745 - 42025799
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagt-ttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
42025745 |
acctcacaattgtgtgtgagtcttaatttcagtggactaccacttcatctaagac |
42025799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 40825201 - 40825161
Alignment:
| Q |
29 |
tgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
40825201 |
tgtgtgtgagtttattttcaatggattatcacttcatctaa |
40825161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 20497643 - 20497592
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag |
70 |
Q |
| |
|
|||||||| |||| ||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
20497643 |
acctcacaattgtatgtgagttttatttcagtggtttaccacttcatctaag |
20497592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 15345016 - 15344966
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||| |||| ||||| ||||| |
|
|
| T |
15345016 |
ctcagagttgtgtgtgaatttattttcagtggatcaccatttcatttaaga |
15344966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 15782674 - 15782715
Alignment:
| Q |
29 |
tgtgtgtgagtttattttcagtggattaccacttcatctaag |
70 |
Q |
| |
|
|||||| ||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
15782674 |
tgtgtgggagtttaatttcagtggtttaccacttcatctaag |
15782715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 34234615 - 34234656
Alignment:
| Q |
31 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
34234615 |
tgtgtgagtttaatttcagtagatcaccacttcatctaagac |
34234656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1348 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1348
Description:
Target: scaffold1348; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 916 - 862
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
916 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 14005 - 13951
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14005 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
13951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19685 - 19631
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19685 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
19631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 56555 - 56609
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
56555 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
56609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 39)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 1394 - 1340
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1394 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
1340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 70577 - 70523
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
70577 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
70523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 1078702 - 1078648
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1078702 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
1078648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6602572 - 6602518
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6602572 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
6602518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6678025 - 6677971
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6678025 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
6677971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 32333188 - 32333242
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32333188 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
32333242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35779551 - 35779497
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35779551 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
35779497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 7813396 - 7813447
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7813396 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
7813447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 28817333 - 28817384
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28817333 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
28817384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 42192690 - 42192639
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42192690 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
42192639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 42885251 - 42885302
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42885251 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
42885302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13891164 - 13891218
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13891164 |
gacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaagac |
13891218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 9292096 - 9292145
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9292096 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
9292145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 7792738 - 7792789
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7792738 |
ctcacagttgtgtgtgagtttattttcagtggattactacttcatctaagac |
7792789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 31532179 - 31532128
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31532179 |
gacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa |
31532128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 10963294 - 10963242
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10963294 |
gacctcacagttgtgtg--agtttattttcagtggattaccacttcatctaagac |
10963242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 39303383 - 39303438
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagttt-attttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
39303383 |
gacctcacagttgtgtgtgagttttaatttcagtggattaccacttcatctaagac |
39303438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 4531036 - 4530982
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4531036 |
gacctcacagctgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
4530982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20269607 - 20269657
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
20269607 |
ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaaga |
20269657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 21056236 - 21056286
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
21056236 |
ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaaga |
21056286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 31695331 - 31695269
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
31695331 |
gaacctgggacctcacaattgtgtgtgagtttaatttcaatggtttaccacttcatctaagac |
31695269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 45264694 - 45264640
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
45264694 |
gacctcacagttttgtgtgagtttaatttcagtggattaccacttcctctaagac |
45264640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 29425435 - 29425479
Alignment:
| Q |
28 |
ttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29425435 |
ttgtgtgtgagtttaatttcagtggattaccacttcatctaagac |
29425479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 31969774 - 31969720
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||| |
|
|
| T |
31969774 |
gacctcaaagttgtgtgtgaatttaatttcagtggtttaccacttcatctaagac |
31969720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 39435356 - 39435410
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
39435356 |
gacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac |
39435410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 40911294 - 40911347
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
40911294 |
gacctcacaactgtgtgtgagtttaatttcagtggcttaccacttcatctaaga |
40911347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 3822473 - 3822524
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| ||||||||||| |||||||| |
|
|
| T |
3822473 |
ctcacagttgtgtgtgagtttaattttagtgaattaccacttcttctaagac |
3822524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 5385412 - 5385459
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcat |
65 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
5385412 |
gacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcat |
5385459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 12534758 - 12534720
Alignment:
| Q |
34 |
gtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12534758 |
gtgagtttattttcagtagattaccacttcatctaagac |
12534720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 33731518 - 33731464
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| |||||||||||||||||| ||| ||||| |||||||||| |||||||| |
|
|
| T |
33731518 |
gacctcccagttgtgtgtgagtttaattttagtggtttaccacttcttctaagac |
33731464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 42364752 - 42364702
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||| ||||||| | ||||||||| ||||||||| |
|
|
| T |
42364752 |
tcacagttgtgtgtgagtttaatttcagtagtttaccactttatctaagac |
42364702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 9775095 - 9775042
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| |||||||||||| ||| | |||||||| |||||||||||||| |
|
|
| T |
9775095 |
acctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaagac |
9775042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 40932786 - 40932834
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||||||||||| |||| ||| ||| |||||||||||||||||| |
|
|
| T |
40932786 |
ctcacagttgtgtgtgactttaattttagtagattaccacttcatctaa |
40932834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41849284 - 41849233
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||| |||||||||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
41849284 |
acctcactgttgtgtgtgagtttaatttcagt-gattaccatttcatctaaga |
41849233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 14400789 - 14400843
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||| ||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
14400789 |
gacctcacaattgtgagtgagtttaattcaagtggtttaccacttcatctaagac |
14400843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 44124092 - 44124154
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| ||||| || ||||| ||||||| |||||| |
|
|
| T |
44124092 |
gaacctgagacttcacagttgtgtgtaagtttaatttcattgaattactacttcatataagac |
44124154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 6099647 - 6099700
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||| ||| | ||||||||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
6099647 |
acctcacaattgcgcgtgagtttagttttagtggtttaccacttcatctaagac |
6099700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 7403744 - 7403696
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| ||||||||||||||||||| |
|
|
| T |
7403744 |
tcacagttgtttgtgagcttaatttcagtg-attaccacttcatctaaga |
7403696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 18752416 - 18752468
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||| ||||||||||||| ||||| |||||||||||| |||||||| ||||| |
|
|
| T |
18752416 |
accttacagttgtgtgtgggtttaatttcagtggattgacacttcatntaaga |
18752468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 55; Significance: 9e-23; HSPs: 45)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4106812 - 4106866
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4106812 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
4106866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4107383 - 4107437
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4107383 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
4107437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 23358259 - 23358313
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23358259 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
23358313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 31770586 - 31770532
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31770586 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
31770532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 38781262 - 38781208
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38781262 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
38781208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 44084014 - 44084065
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44084014 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
44084065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 47570769 - 47570718
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47570769 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
47570718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 2146710 - 2146764
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2146710 |
gacctcacagttgtgtgtgggtttattttcagtggattaccacttcatctaagac |
2146764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 8439152 - 8439206
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8439152 |
gacctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaagac |
8439206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 19630718 - 19630668
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19630718 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
19630668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 25112301 - 25112247
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
25112301 |
gacctcacagttgtgtgtgggtttattttcagtggattaccacttcatctaagac |
25112247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 40058312 - 40058366
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40058312 |
gacctcacagttgtgtatgagtttattttcagtggattaccacttcatctaagac |
40058366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 11355900 - 11355951
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11355900 |
ctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagac |
11355951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 25546329 - 25546275
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
25546329 |
gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
25546275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 38033803 - 38033853
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcta |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38033803 |
gacctcacagttgtgtgtgagtttattttcagtggagtaccacttcatcta |
38033853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 47250297 - 47250251
Alignment:
| Q |
26 |
agttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47250297 |
agttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
47250251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 48146827 - 48146881
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
48146827 |
gacctcacagttgtgtgtgagttaattttcattggattaccacttcatctaagac |
48146881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 41183890 - 41183943
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41183890 |
acctcacagttatgtgtgagtttattttcagtggattatcacttcatctaagac |
41183943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 15634929 - 15634882
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
15634929 |
tcacagttgtgtgtgagtttattttcagtagattaccacttcatctaa |
15634882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 5772872 - 5772819
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |
|
|
| T |
5772872 |
acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatttaagac |
5772819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 7162831 - 7162790
Alignment:
| Q |
31 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7162831 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
7162790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 47557856 - 47557909
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
47557856 |
acctcacagttgtatgtgagtttaatttcagtggtttaccacttcatctaagac |
47557909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34763516 - 34763560
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccactt |
62 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34763516 |
gacctcacagttgtgtgtgagtttaatttcagtggattaccactt |
34763560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 31288275 - 31288224
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
31288275 |
ctcacagttgtgtgtaagtttaatttcagtggtttaccacttcatctaagac |
31288224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 48444202 - 48444152
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||| |||||| |||||||| |||||||||||||||||||| |
|
|
| T |
48444202 |
tcacagttgtgtgtaagtttaatttcagtgaattaccacttcatctaagac |
48444152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 43753807 - 43753754
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagttt-attttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||||||| ||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
43753807 |
acctcacagttgtatgtgagttttaatttcagtggattaccacttcatctaaga |
43753754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 27229532 - 27229484
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgag-tttattttcagtggattaccacttcat |
65 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
27229532 |
gacctcacagttgtgtgtgagttttaatttcagtggattaccacttcat |
27229484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 27915631 - 27915580
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| |||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
27915631 |
ctcacagttgtgtatgagtttaatttcaatgaattaccacttcatctaagac |
27915580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 42081671 - 42081619
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
42081671 |
gacctcacagttgtgtg--agtttattttcagtgaattaccactttatctaagac |
42081619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 5463012 - 5462950
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| || |||||||||||||||||||||| ||||| |||| |||||||||||| |||| |
|
|
| T |
5463012 |
gaacctgagatctcacagttgtgtgtgagtttaatttcaatggagaaccacttcatcttagac |
5462950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5587354 - 5587408
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| || ||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
5587354 |
gacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaagac |
5587408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5592315 - 5592369
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| || ||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
5592315 |
gacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaagac |
5592369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 25872829 - 25872891
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| |||||| ||| |||||| ||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
25872829 |
gaacctatgaccttacaattgtgtatgagtttattttctgtgatttaccacttcatctaagac |
25872891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 28603089 - 28603139
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| |||| |||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
28603089 |
tcacaattgtatgtgagtttaatctcagtggattaccacttcatctaagac |
28603139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29484809 - 29484755
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| |||| |||||||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
29484809 |
gacctcacaattgtatgtgagtttaatttcagtggattatcacttcatataagac |
29484755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 39514037 - 39513983
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| |||||| |||||||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
39514037 |
gaccttacagttatgtgtgagtttaatttcggtggattaccacttcatctgagac |
39513983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 40657603 - 40657657
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||| |||| ||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
40657603 |
gacctcatagttatgtgcgagtttaatttcagtggattatcacttcatctaagac |
40657657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 43203380 - 43203434
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||| |||||||| |||||| |
|
|
| T |
43203380 |
gaccttacagttgtgtgtgagtttatttacagtggattttcacttcatataagac |
43203434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 10220525 - 10220473
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||| |||||| |||||||||||| |
|
|
| T |
10220525 |
acctcacagttttgtgtgagtttaatttcagtggtttacca-ttcatctaagac |
10220473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 35309931 - 35309982
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| ||||||| ||||||| ||||||||| ||| ||||||||||||||| |
|
|
| T |
35309931 |
ctcacaattgtgtgcgagtttaatttcagtggtttatcacttcatctaagac |
35309982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 43170986 - 43170939
Alignment:
| Q |
25 |
cagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
43170986 |
cagttgtatgtgagtttaatttcaatggattaccacgtcatctaagac |
43170939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 4001885 - 4001844
Alignment:
| Q |
31 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
4001885 |
tgtgtgagtttaatttcaatggtttaccacttcatctaagac |
4001844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 46427435 - 46427487
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| | ||||||||| | ||||||| |
|
|
| T |
46427435 |
acctcacagttgtgtgtgagtttaatttcagt-gtttaccacttaaactaagac |
46427487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 23036244 - 23036208
Alignment:
| Q |
33 |
tgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
23036244 |
tgtgagtttaatttcaatggattaccacttcatctaa |
23036208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 25050009 - 25049965
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcat |
65 |
Q |
| |
|
||||||||||| |||||||||| ||| |||||||||||| ||||| |
|
|
| T |
25050009 |
ctcacagttgtatgtgagtttaatttaagtggattaccatttcat |
25049965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 23)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35218694 - 35218640
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35218694 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
35218640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 4464193 - 4464255
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4464193 |
gaacctgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
4464255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21037364 - 21037418
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21037364 |
gacctcacagttgtgtgtgagtttattttcagtgaattaccacttcatctaagac |
21037418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 29009712 - 29009650
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
29009712 |
gaacctgggacctcacagttgtgtgtgagtttatttttagtgaattaccacttcatctaagac |
29009650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33704290 - 33704344
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
33704290 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatttaagac |
33704344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33621568 - 33621622
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
33621568 |
gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
33621622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19145544 - 19145598
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
19145544 |
gacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatctaagac |
19145598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28323006 - 28323060
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
28323006 |
gacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatctaagac |
28323060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 28592182 - 28592128
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |
|
|
| T |
28592182 |
gacctcacagttgtgtgtgagtttattttcaatggattaccaatttatctaagac |
28592128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 24619135 - 24619079
Alignment:
| Q |
16 |
gtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| | ||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
24619135 |
gtgacctcataattgtgtgtgagtttaatttcagtcgattaccacttcatctaagac |
24619079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 2959223 - 2959277
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||| |
|
|
| T |
2959223 |
gacctcacagttgtgtgtgagtttaatttccgtggaataccacttcatcttagac |
2959277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 32289419 - 32289473
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| |||||||||||||| ||||| |
|
|
| T |
32289419 |
gacctcacagttgtgtgtaagtttattatcagtgaattaccacttcatcaaagac |
32289473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 361086 - 361139
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| | |||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
361086 |
acctcacagttatatgtgagtttaatttcagtggattaacacttcatctaagac |
361139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 16518508 - 16518549
Alignment:
| Q |
31 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16518508 |
tgtgtgagtttattttcagtggattaccatttcatctaagac |
16518549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 10999459 - 10999416
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttca |
64 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
10999459 |
ctcacagttgtatgtgagtttaatttcagtggattaccacttca |
10999416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 11456047 - 11456101
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| | |||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
11456047 |
gacctcataattgtgtgtgagtttatttctagtcgattaccacttcatctaagac |
11456101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21000766 - 21000820
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||| ||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
21000766 |
gacctcacaattgtgtgtgggtttaatttcagtggtttaccacttcatctgagac |
21000820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 32353991 - 32353941
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||| || ||||||||| |
|
|
| T |
32353991 |
tcacagttgtgtgtgagtttattttcaattgattaccattttatctaagac |
32353941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 9454778 - 9454732
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcat |
65 |
Q |
| |
|
||||||||||| | |||||||||| ||||||||| |||||||||||| |
|
|
| T |
9454778 |
acctcacagttatatgtgagtttaatttcagtggtttaccacttcat |
9454732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 12252097 - 12252150
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||| ||||||||||||||||| ||| | ||| |||||||||||| ||||| |
|
|
| T |
12252097 |
gacctcatagttgtgtgtgagtttaattttaatggcttaccacttcatttaaga |
12252150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 22576256 - 22576309
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| ||||||||||| ||||| || ||||||||||| |||||||| |
|
|
| T |
22576256 |
acctcacagttatgtgtgagtttgatttcattgtattaccacttcttctaagac |
22576309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 7014349 - 7014313
Alignment:
| Q |
33 |
tgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
7014349 |
tgtgagtttaatttcagtgtattaccacttcatctaa |
7014313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 11572082 - 11572110
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttatttt |
46 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
11572082 |
gacctcacagttgtgtgtgagtttatttt |
11572110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 28)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 2971050 - 2971112
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2971050 |
gaacctgagacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaagac |
2971112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21018297 - 21018351
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21018297 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
21018351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 29265949 - 29266003
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29265949 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
29266003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 31909439 - 31909385
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31909439 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
31909385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 32143468 - 32143414
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32143468 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
32143414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35317751 - 35317697
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35317751 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
35317697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 4824993 - 4824939
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4824993 |
gacctcacagttgtgtgtgagtttattttcaatggattaccacttcatctaagac |
4824939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13204031 - 13204085
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13204031 |
gacctcacagttatgtgtgagtttattttcagtggattaccacttcatctaagac |
13204085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 23262619 - 23262672
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23262619 |
accttacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
23262672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 12257430 - 12257484
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12257430 |
gacctcataattgtgtgtgagtttattttcagtggattaccacttcatctaagac |
12257484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 21112115 - 21112177
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21112115 |
gaacctgggacctcaaagttgtgtttgagtttattttcagtggattaccacatcatctaagac |
21112177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 6021066 - 6021117
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6021066 |
gacctctcagttgtgtgtgagtttattttcagtggattaccactttatctaa |
6021117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 40177702 - 40177749
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40177702 |
tcaccgttgtgtgtgagtttattttcagtggattaccacttcatctaa |
40177749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 2786338 - 2786398
Alignment:
| Q |
11 |
aacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| || |||||||||||||||||||||||||| |
|
|
| T |
2786338 |
aacctgggacctcacagttgtgtatgagtttaatt-cagtggattaccacttcatctaagac |
2786398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 2971176 - 2971133
Alignment:
| Q |
88 |
tattcttctatttatgatgcatttaacgtacaagtttatatcaa |
131 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2971176 |
tattcttctatttatgatgcatttaatgtacaagtttatatcaa |
2971133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 35545999 - 35546061
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||| |
|
|
| T |
35545999 |
gaacctgggacctcacagttgtatgtgggtttaatttaagtggattatcacttcatctaagac |
35546061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3386946 - 3386894
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||| |||||||||||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
3386946 |
acctcaaagttgtgtgtgaatttaatttcagtggattaccacttcttctaaga |
3386894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 1191594 - 1191543
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
1191594 |
gacctcacaattgtgtgtgagtttaatttcagtggcttacaacttcatctaa |
1191543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 14270601 - 14270652
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14270601 |
ctcatagttgtgtttaagtttattttcagtggattatcacttcatctaagac |
14270652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 17984795 - 17984745
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||| ||| |||||||||||| |
|
|
| T |
17984795 |
acctcacagttgtgtgtgagtttaattttagtggcttatcacttcatctaa |
17984745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 19181789 - 19181838
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
19181789 |
tcacagttgtgtgtgagtttaatttcagtggatta-cacttcatttaagac |
19181838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 27721505 - 27721550
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttc |
63 |
Q |
| |
|
|||||||||||||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
27721505 |
gacctcacagttgtatgtgaatttaatttcagtggattaccacttc |
27721550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 28591403 - 28591350
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||| |||||||||||||| |||| |
|
|
| T |
28591403 |
acctcacagttgtgtatgagtttaatgtcagtggtttaccacttcatcttagac |
28591350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 17465170 - 17465205
Alignment:
| Q |
37 |
agtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17465170 |
agtttaatttcagtggattaccacttcatctaagac |
17465205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 8734071 - 8734125
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagttt-attttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
8734071 |
acctcacagttgtacgtgagttttaacttcagtggattaccacttcatctaagac |
8734125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 41580128 - 41580078
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||||||||||| ||||| ||| | |||||||||||||||||||| |
|
|
| T |
41580128 |
acctcacagttgtgtgtaggtttaattttaatggattaccacttcatctaa |
41580078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 4925673 - 4925714
Alignment:
| Q |
31 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4925673 |
tgtgtaagtttaatttcagtggtttaccacttcatctaagac |
4925714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 28423302 - 28423242
Alignment:
| Q |
12 |
acctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||| |||||||||||||| ||||| | ||||||| |||||||||||| |
|
|
| T |
28423302 |
acctgggacctcacaattgtgtgtgagttttatttcactatattaccatttcatctaagac |
28423242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 55; Significance: 9e-23; HSPs: 45)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 1174025 - 1174079
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1174025 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
1174079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 12735505 - 12735559
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12735505 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
12735559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 26424912 - 26424858
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26424912 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
26424858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 34739354 - 34739408
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34739354 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
34739408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 43139960 - 43139906
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43139960 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
43139906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 45874129 - 45874183
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45874129 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
45874183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 53457898 - 53457952
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53457898 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
53457952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 238512 - 238458
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
238512 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcgaagac |
238458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 12867907 - 12867969
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12867907 |
gaacctgggatctcacagttgtgagtgagtttattttcagtggattaccacttcatctaagac |
12867969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 18257403 - 18257457
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18257403 |
gacctcacagttgtgcgtgagtttattttcagtggattaccacttcatctaagac |
18257457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 28798442 - 28798388
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28798442 |
gaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
28798388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 23417531 - 23417483
Alignment:
| Q |
24 |
acagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23417531 |
acagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
23417483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 1966624 - 1966678
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
1966624 |
gacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaagac |
1966678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19849557 - 19849503
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
19849557 |
gacctcacagttgtgtgtgagtttattttcaatggtttaccacttcatctaagac |
19849503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 54768486 - 54768432
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
54768486 |
gacctcacagttgtgtgcgagttttttttcagtggattaccacttcatctaagac |
54768432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 55214726 - 55214779
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
55214726 |
gacctcacagttgtgtatgagtttattttcagtggattaccactttatctaaga |
55214779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 55400303 - 55400356
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55400303 |
acctcatagttgtatgtgagtttattttcagtggattaccacttcatctaagac |
55400356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29581097 - 29581044
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
29581097 |
gacctcacagttgtgtgtgagtttaattt-agtggattaccacttcatctaagac |
29581044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 31015057 - 31015110
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
31015057 |
acctcacagttgtgtgtgagtttaatttcagtgctttaccacttcatctaagac |
31015110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 39807918 - 39807963
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttc |
63 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
39807918 |
gacctcacagttgtgtgtgagtttaatttcagtggattaccacttc |
39807963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19225333 - 19225387
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
19225333 |
gacctcacaattgtgcgtgagtttagtttcagtggtttaccacttcatctaagac |
19225387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 23710395 - 23710337
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcta |
68 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23710395 |
gaacctggaacctcacagttacgtgtgagtttaatttcagtggattaccacttcatcta |
23710337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 19814172 - 19814229
Alignment:
| Q |
11 |
aacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcta |
68 |
Q |
| |
|
|||||| ||||||||| || |||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
19814172 |
aacctgggacctcacaattatgtgtgagtttaatttcagttgattaccacttcatcta |
19814229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 52172043 - 52171990
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||| || |||||| |
|
|
| T |
52172043 |
acctcacaattgtgtgtgagtttaatttcagtggattaccactttatttaagac |
52171990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 50347377 - 50347329
Alignment:
| Q |
24 |
acagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
50347377 |
acagatgtgtgtgagtttaatttcagtggattaccacctcatctaagac |
50347329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 23532125 - 23532172
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
23532125 |
tcacagttgtgtgtgagtttaatttcagtgaattaccacttcttctaa |
23532172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 52768351 - 52768301
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||| |||||||||||| |
|
|
| T |
52768351 |
ctcacagttgtgtgtgagtttaatttcaatggattacca-ttcatctaagac |
52768301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 516507 - 516457
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
516507 |
ctcacaattgtgtgtgagtttattttcggtggattacagcttcatctaaga |
516457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19673983 - 19673929
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| || |||| ||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
19673983 |
gacctcacaattatgtgcgagtttaatttcagtggattaccacttcatttaagac |
19673929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22608059 - 22608113
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| |||||||| ||||||||| |||| |
|
|
| T |
22608059 |
gacctcacagttgtgtctgagtttaatttcaatggattactacttcatctgagac |
22608113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 33770650 - 33770696
Alignment:
| Q |
26 |
agttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
33770650 |
agttgtgtgtgagtttaatttcagtggtttaccgcttcatctaagac |
33770696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 37620695 - 37620745
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
37620695 |
tcacaggtttgtgtgagtttaatttcagtggattaccacttcatcaaagac |
37620745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 48822890 - 48822940
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||||||||| ||||| | |||||||||||||| ||||| |
|
|
| T |
48822890 |
ctcacagttgtgtgtgagtttaatttcaatagattaccacttcatttaaga |
48822940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 51287676 - 51287730
Alignment:
| Q |
19 |
acctcacagttgtgtgtgag-tttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||| ||||||| |||||||||||| |
|
|
| T |
51287676 |
acctcacagttgtgtgtgagttttaatttcagtgaattaccatttcatctaagac |
51287730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 16555382 - 16555435
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||| |||| ||| | || |||||||||||||||||||| |
|
|
| T |
16555382 |
acctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaagac |
16555435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12767162 - 12767214
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||| |||| |||||||||||| |
|
|
| T |
12767162 |
acctcacagttgtgtgtgagtttaatttcactggtttactgcttcatctaaga |
12767214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 37134126 - 37134166
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccactt |
62 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
37134126 |
tcacagttgtgtgtgagtttaatttcagtggtttaccactt |
37134166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 11278067 - 11278106
Alignment:
| Q |
33 |
tgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
11278067 |
tgtgagtttaatttcagtggtttaccacttcatctaagac |
11278106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 44369978 - 44369916
Alignment:
| Q |
9 |
agaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||| | | ||||||||||||||||||||| ||||||||| ||||| | ||||||||||| |
|
|
| T |
44369978 |
agaacctggggcttcacagttgtgtgtgagtttaatttcagtggtttaccgc-tcatctaagac |
44369916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 1125964 - 1126014
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||||||| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
1125964 |
ctcacagttgtgtatgagtttaatttcaataaattaccacttcatctaaga |
1126014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19119204 - 19119257
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||| |||| ||| |||||||||| |
|
|
| T |
19119204 |
gacctcacagt-gtgtgtgagtttaatttcagtggtttactactccatctaagac |
19119257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 24417932 - 24417878
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| |
|
|
| T |
24417932 |
gacctcacagttgtggatgagtttaattttagtggattaccacttcttccaagac |
24417878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 50033460 - 50033510
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||| |||||| ||||| || ||||||||||||| |||||| |
|
|
| T |
50033460 |
tcacagttgtgtgtaagtttaatttcaatgaattaccacttcatataagac |
50033510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 50035958 - 50036020
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| ||||| || ||||| ||||||| |||||| |
|
|
| T |
50035958 |
gaacctgagacttcacagttgtgtgtaagtttaatttcattgaattactacttcatataagac |
50036020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 52016080 - 52016129
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||| || ||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
52016080 |
tcacagttgggtatgagtttattttcgatggattaccacttcatttaaga |
52016129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 7824508 - 7824454
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7824508 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
7824454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29689536 - 29689482
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29689536 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
29689482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 43247704 - 43247650
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43247704 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
43247650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 54158340 - 54158394
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54158340 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
54158394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 3113046 - 3112995
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3113046 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
3112995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 9349730 - 9349679
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9349730 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
9349679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 36229048 - 36228994
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
36229048 |
gacctcacagttgtgtgtgagtttattttcaatggattaccacttcatctaagac |
36228994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 51665979 - 51665925
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51665979 |
gaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
51665925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 52500904 - 52500966
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
52500904 |
gaacctgaaacctcacagttgtgtgtgagtttattttcagtagattaccacttcatctaagac |
52500966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 54151735 - 54151681
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54151735 |
gacctcacagttgtgtatgagtttattttcagtggattaccacttcatctaagac |
54151681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 55320454 - 55320400
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55320454 |
gacctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
55320400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 4601500 - 4601553
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4601500 |
acctcacagttgtgtgtgagtttattttcagtggattaccagttcatctaagac |
4601553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 55018088 - 55018040
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatc |
66 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55018088 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatc |
55018040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 28844570 - 28844633
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttatttt-cagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28844570 |
gaacctggaacctcacagttgtgtgtgagtttatttttcagtggattaccacttcatctaagac |
28844633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 42392859 - 42392805
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
42392859 |
gacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
42392805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38257356 - 38257304
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
38257356 |
acctcacaattgtgtgtgagtttaatttcagcggattaccacttcatctaaga |
38257304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 7958643 - 7958694
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||| ||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
7958643 |
gacctcacagttatgtgtaagtttatttttagtggattaccacttcatctaa |
7958694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 32001475 - 32001424
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
32001475 |
ctcacagttgtgtgtgagtttattttcagtgatttaccacttcatataagac |
32001424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 43775300 - 43775351
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||| | |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
43775300 |
ctcacagttgtatttgagtttaatttcagtggattaccacttcatctaagac |
43775351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33334682 - 33334736
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||| |||||||| |||||| |
|
|
| T |
33334682 |
gacctcacagttgtgtgtgagtttaatttcagtagattatcacttcatataagac |
33334736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 475333 - 475281
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| |||||||||||||||||||| |
|
|
| T |
475333 |
acctcacagttgtgtgtgagtttaatt-cagtgaattaccacttcatctaagac |
475281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 40756781 - 40756728
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |
|
|
| T |
40756781 |
gacctcacagttgcgtgtgagtttaatttcagtagtttaccacttcatctaaga |
40756728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 41377666 - 41377707
Alignment:
| Q |
31 |
tgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
41377666 |
tgtgtgagtttattttcagcggattaccacttcatctaagac |
41377707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35461532 - 35461480
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| || ||||||||||| |
|
|
| T |
35461532 |
acctcacagttgtgtgtgagtttattttctgtagattatcatttcatctaaga |
35461480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 1778926 - 1778977
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag |
70 |
Q |
| |
|
|||||||| |||||| ||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
1778926 |
acctcacaattgtgtttgaatttattttcaatggattaccacttcatctaag |
1778977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 27230744 - 27230794
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||| |||| |||||||| ||||||||||||||| |||| |
|
|
| T |
27230744 |
tcacagttgtgtgtgaatttaatttcagtgaattaccacttcatctcagac |
27230794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 47635059 - 47635005
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
47635059 |
gacctcgcagttatgtgtaagtttaatttcagttgattaccacttcatctaagac |
47635005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 448929 - 448884
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttc |
63 |
Q |
| |
|
|||||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
448929 |
gacctcacagttgtttgtgagtttaattttagtggattaccacttc |
448884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 2590847 - 2590810
Alignment:
| Q |
35 |
tgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2590847 |
tgagtttaatttcagtggattaccacttcatctaagac |
2590810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 29750695 - 29750748
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||| ||||||| | || |||||||||||||||||||||||||| |
|
|
| T |
29750695 |
gacctcacatttgtgcgtgagttaaatt-cagtggattaccacttcatctaagac |
29750748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 50729598 - 50729652
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| ||||| | |||||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
50729598 |
gacctcgcagttttatgtgagtttaatttcaatagattaccacttcatctaagac |
50729652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 50783251 - 50783197
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| ||||| | |||||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
50783251 |
gacctcgcagttttatgtgagtttaatttcaatagattaccacttcatctaagac |
50783197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 51054776 - 51054829
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| | |||| ||| |||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
51054776 |
acctcataattgtttgtaagtttaatttaagtggattaccacttcatctaagac |
51054829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 37)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 5055842 - 5055788
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5055842 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
5055788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28455948 - 28456002
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28455948 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
28456002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 32007148 - 32007202
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32007148 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
32007202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 41039357 - 41039303
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41039357 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
41039303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 45813065 - 45813011
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45813065 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
45813011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 41808277 - 41808330
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41808277 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
41808330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 48660099 - 48660150
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48660099 |
ctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
48660150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 20822 - 20876
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
20822 |
gacctcacagttgtgtgtgagtttatttttagtggattaccacttcatctaagac |
20876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 192489 - 192543
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
192489 |
gacctcacagttgtgtgtgagtttattttcagcggattaccacttcatctaagac |
192543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 41761465 - 41761411
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
41761465 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatccaagac |
41761411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 13109845 - 13109898
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13109845 |
acctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagac |
13109898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35945872 - 35945924
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
35945872 |
acctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaaga |
35945924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 39276424 - 39276478
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39276424 |
gacctcacagttatgtgtgagtttattttcagtggattaccacttcatttaagac |
39276478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 3716428 - 3716490
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
3716428 |
gaacctgagacctcacagttgtgtgtgagtttatttttagtggattgtcacttcatcttagac |
3716490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 7059541 - 7059595
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
7059541 |
gacctcacagttgtgtgtgagtttaatttaagtggattaccactttatctaagac |
7059595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 11688345 - 11688391
Alignment:
| Q |
26 |
agttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11688345 |
agttgtgtgtgagtttattttcagtggattaccacttcatccaagac |
11688391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 26032867 - 26032929
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
26032867 |
gaacctggaacctcacagttttgtgtgagtttaatttcagtggattaccgcttcatctaagac |
26032929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29994437 - 29994383
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
29994437 |
gacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatctaagac |
29994383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 778648 - 778702
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||| |
|
|
| T |
778648 |
gacctgacagttgtgtgtgagtttaatttcagtgaattaccaattcatctaagac |
778702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5943755 - 5943809
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |
|
|
| T |
5943755 |
gacctcacagttgtttgtgagtttaatttcaatggattatcacttcatctaagac |
5943809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35110153 - 35110099
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||||||||||||| ||| || |||||||||||||||||||||| |
|
|
| T |
35110153 |
gaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaagac |
35110099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 50106250 - 50106200
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcta |
68 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
50106250 |
gacctcacagttatgtgtgagtttattttcagtggattgccatttcatcta |
50106200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 13097379 - 13097432
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| |||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
13097379 |
acctcacagttgtatgtgagtttaattttattggattaccacttcatctaagac |
13097432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21939016 - 21939069
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| || |||||||||||||||||| |
|
|
| T |
21939016 |
gacctcacagttgtgtgcgagtttaatttcagcggtttaccacttcatctaaga |
21939069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 26264598 - 26264537
Alignment:
| Q |
10 |
gaacctgtgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||| || |||| |||||||||||||| |
|
|
| T |
26264598 |
gaacctgaaacctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaaga |
26264537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 49783782 - 49783835
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||| |
|
|
| T |
49783782 |
acctcacagttgtatgtgaatttaatttcagtggtttaccacttcatctaagac |
49783835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 7275759 - 7275806
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| |||||||||||||||| |
|
|
| T |
7275759 |
tcacagttgtgtatgagtttaatttcagtggtttaccacttcatctaa |
7275806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 2088958 - 2088908
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||||||| |||| |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
2088958 |
acctcacaattgtatgtgagttcaatttcagtggattaccacttcatctaa |
2088908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4066035 - 4066089
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||| |||| |||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
4066035 |
gaccttacaattgtatgtgagtttaatttcagtgaattaccacttcatctaagac |
4066089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 13183229 - 13183179
Alignment:
| Q |
19 |
acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa |
69 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
13183229 |
accttacagttgtatgtgagtttaatttcagtgaattaccacttcatctaa |
13183179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 16770210 - 16770177
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtg |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
16770210 |
gacctcacagttgtgtgtgagtttattttcagtg |
16770177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 32982400 - 32982351
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
32982400 |
tcacagttgtgtgtgagtttgatttcagtggtttactacttcatctaaga |
32982351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 46447431 - 46447373
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagttta----ttttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
46447431 |
gacctcacagttatgtgtgagtttaattattttcagtggattaccacatcatctaagac |
46447373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 9886946 - 9886892
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| |||||| |||||||||||| | ||| || |||||||||||||||||||| |
|
|
| T |
9886946 |
gacctaacagttatgtgtgagtttaatatcactgaattaccacttcatctaagac |
9886892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 25931207 - 25931157
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||| ||||||||||||||| ||||| | |||||||||||||||| |||| |
|
|
| T |
25931207 |
tcacaattgtgtgtgagtttaatttcaatagattaccacttcatctgagac |
25931157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 34305702 - 34305652
Alignment:
| Q |
22 |
tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||| ||| |||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
34305702 |
tcacagttgtttgtaagtttaatttcattggattaccacttcatttaagac |
34305652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 39112011 - 39112050
Alignment:
| Q |
21 |
ctcacagttgtgtgtgagtttattttcagtggattaccact |
61 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
39112011 |
ctcacaattgtgtgtgagttta-tttcagtggattaccact |
39112050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 10027 - 9973
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10027 |
gacctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
9973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22237 - 22291
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22237 |
gacctcacagttgcgtgtgagtttaatttcagtggattaccacttcatctaagac |
22291 |
T |
|
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Target: scaffold0352 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 8997 - 8943
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
8997 |
gacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcatctaagac |
8943 |
T |
|
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Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 114326 - 114380
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
114326 |
gacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatctaagac |
114380 |
T |
|
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Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 34892 - 34947
Alignment:
| Q |
18 |
gacctcacagttgtgtgtgagttt-attttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
34892 |
gacctcgcagttgtatgtgagttttaatttcagtggattaccacttcatctaagac |
34947 |
T |
|
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Target: scaffold0360 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0360
Description:
Target: scaffold0360; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 14590 - 14632
Alignment:
| Q |
29 |
tgtgtgtgagtttattttcagtggattaccacttcatctaaga |
71 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
14590 |
tgtgtgtgagtttaatttcagtggattaccacttaatctaaga |
14632 |
T |
|
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Target: scaffold0631 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0631
Description:
Target: scaffold0631; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 4413 - 4446
Alignment:
| Q |
39 |
tttattttcagtggattaccacttcatctaagac |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
4413 |
tttattttcagtggattaccacttcatctaagac |
4446 |
T |
|
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