View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9003_low_86 (Length: 221)
Name: NF9003_low_86
Description: NF9003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9003_low_86 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 22253103 - 22253295
Alignment:
| Q |
18 |
catcagattctcacttgctcttgtatctgttttgtgctttcctagaacatccaaagtggatgctacatgtggatgcaacgtcttatgctggagctcagtc |
117 |
Q |
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| T |
22253103 |
catcagattctcacttgctcttgtatctgttttgtgctttcctagaacatccaaagtggatgctacatgtggatgcaacgtcttatgctggagctcagtc |
22253202 |
T |
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| Q |
118 |
tagcaaaaaccccttattcttgggagtccttcctccaaaggataggtttccagagaaatacatctccgtagtgtcttcagtcccttctgtgct |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22253203 |
tagcaaaaaccccttattcttgggagtccttcctccaaaggataggtttccagagaaatacatctccgtagtgtcttcagtcccttctgtgct |
22253295 |
T |
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