View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9005_high_68 (Length: 290)
Name: NF9005_high_68
Description: NF9005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9005_high_68 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 12 - 290
Target Start/End: Complemental strand, 249010 - 248732
Alignment:
| Q |
12 |
acagacagagagggagcatacaaattagatataccatcagtggatggaactaactgtaaaattgccatggatggtaattcacagattgtgtctctctgcc |
111 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
249010 |
acagacagagagggagcatacaaattagatataccatcagtggatggaactaactgtaaaattgccatggatggtaattcacagattgtgtctctctgcc |
248911 |
T |
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| Q |
112 |
aagcaaccttgataggaacttcatcatcttcttattcttgcaatgttcctttcttgaagagcacaggaagtagtcagatattaaaacaagagaataacct |
211 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248910 |
aagcaagcttgataggaacttcatcatcttcttattcttgcaatgttcctttcttgaagagcacaggaagtagtcagatattaaaacaagagaataacct |
248811 |
T |
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| Q |
212 |
atgtgtatacagcttgggagctcttagttacaagccacctcaaaatatgatcaatactaccttatgctcaaattaattc |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248810 |
atgtgtatacagcttgggagctcttagttacaagccacctcaaaatatgatcaatactaccttatgctcaaattaattc |
248732 |
T |
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