View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9005_low_125 (Length: 317)
Name: NF9005_low_125
Description: NF9005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9005_low_125 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 31386483 - 31386188
Alignment:
| Q |
18 |
ctttctgcataaaaattgttttattgtattgcaaaaattgattaatctctttcctctaaaattagtctattagctccttgtaattaatcttaattagttg |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31386483 |
ctttctgcataaaaattgttttattgtattgcaaaaattgattaatctcattcctctaaaattagtctattagctccttgtaattaatcttaattagttg |
31386384 |
T |
|
| Q |
118 |
taaaagctagtaaatctttctagaaaacaagcaactattctgcatgaaccaagagaatgattataggcaaatttgcgaattgaatttgggagtctaataa |
217 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
31386383 |
taaaagctagtaaatctttctagaaa-caagcaactattctgcatgaaccaagagaatgattataggcaaattcgcgaattgaatttgggagtctaataa |
31386285 |
T |
|
| Q |
218 |
aaaataacctagtaaagccttccctataaatagtaatttattttaacaaaataaggatttgaaacctctactcattctccattttctctgcttctcc |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
31386284 |
aaaataacctagtaaagccttccctataaatagtaatttattttaacaaaataaggatttgaaacctctactcattctccattttctcttcttctcc |
31386188 |
T |
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