View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9005_low_207 (Length: 228)
Name: NF9005_low_207
Description: NF9005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9005_low_207 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 45344776 - 45344984
Alignment:
| Q |
1 |
tttgaaaataaaaaaggtgacatgggattggtgataaaggacatgtgatccaaaggccatgatgtttctaaatctaggtcaaaatccatagaacaaccat |
100 |
Q |
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| T |
45344776 |
tttgaaaataaaaaaggtgacatgggattggtgataaaggacatgtgatccaaaggccatgatgtttctaaatctaggtcaaaatccatagaacaaccat |
45344875 |
T |
|
| Q |
101 |
gttcttctaatgatgtttttgtcttgggaggaaagtcttgattttcttcttcaggttctgacattttttctcaagattctgtttgtgggtgtgatgcaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
45344876 |
gttcttctaatgatgtttttgtcttgggaggaaagtcttgattttcttcttcaggttctgacattttttctcaagatcctgtttgtgggtgtgatgcaaa |
45344975 |
T |
|
| Q |
201 |
agtgataaa |
209 |
Q |
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| T |
45344976 |
agtgataaa |
45344984 |
T |
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