View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9005_low_5 (Length: 764)

Name: NF9005_low_5
Description: NF9005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9005_low_5
NF9005_low_5
[»] chr6 (15 HSPs)
chr6 (15-748)||(26876683-26877416)
chr6 (362-462)||(26638813-26638913)
chr6 (362-462)||(26744779-26744879)
chr6 (389-480)||(26626514-26626605)
chr6 (389-480)||(26732491-26732582)
chr6 (375-456)||(26827272-26827353)
chr6 (388-459)||(26888243-26888314)
chr6 (388-462)||(31287987-31288064)
chr6 (362-462)||(26805931-26806031)
chr6 (388-462)||(28789775-28789849)
chr6 (392-462)||(28795793-28795863)
chr6 (387-459)||(27657419-27657494)
chr6 (428-462)||(26888393-26888427)
chr6 (400-457)||(26059309-26059366)
chr6 (400-457)||(26079279-26079336)
[»] chr4 (9 HSPs)
chr4 (362-456)||(18720791-18720885)
chr4 (362-462)||(18676261-18676361)
chr4 (362-456)||(18652203-18652297)
chr4 (362-456)||(18686301-18686395)
chr4 (362-456)||(18696107-18696201)
chr4 (388-458)||(18650567-18650638)
chr4 (362-456)||(18728227-18728321)
chr4 (388-456)||(18718786-18718855)
chr4 (388-450)||(18692303-18692366)
[»] scaffold0277 (2 HSPs)
scaffold0277 (388-462)||(10350-10424)
scaffold0277 (392-462)||(1394-1464)
[»] chr5 (1 HSPs)
chr5 (405-461)||(29766647-29766703)
[»] chr1 (2 HSPs)
chr1 (387-462)||(265010-265088)
chr1 (389-459)||(26139436-26139506)
[»] chr7 (1 HSPs)
chr7 (405-459)||(10675106-10675160)
[»] chr2 (1 HSPs)
chr2 (404-462)||(18514576-18514634)


Alignment Details
Target: chr6 (Bit Score: 702; Significance: 0; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 702; E-Value: 0
Query Start/End: Original strand, 15 - 748
Target Start/End: Complemental strand, 26877416 - 26876683
Alignment:
Q  15 cacagacacgtacaccggactcaacaatggcattgatttgttgacagcggtagtaatttgagaatataaaatatttgattgtgatcacaattgtcggtaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  26877416 cacagacacgtacaccggactcaacaatggcattgatttgttgacagcggtagtaatttgagaatataaaatatttgattatgatcacaattgtaggtaa 26877317  T
Q  115 cgtacatggacacatgtcgaacagcaaacacaacttcgatcatgctgcaaattaaacatccatcacagtaaattcagacaatattttgaactgcacaaac 214  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26877316 cggacatggacacatgtcgaacaccaaacacaacttcgatcatgctgcaaattaaacatccatcacagtaaattcagacaatattttgaactgcacaaac 26877217  T
Q  215 atcatccacttacagaatcacaaacatgcaatcttgagattgtggagtaagcttcctcttattgagagaacaacaacaagacagttaactttatgattat 314  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26877216 atcattcacttacagaatcacaaacatgcaatcttgagattgtggagtaagcttcctcttattgagagaacaacaacaagacagttaactttatgattat 26877117  T
Q  315 ccttttcttttcttttcttgcacccacgaaaagtctcacgtcctcaaatattcatctagctttctctttttcatataaggattggtgaatatcacatcct 414  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26877116 ccttttcttttctcttcttgcacccacgaaaagtctcacgtcctcaaatattcatctagctttctctttttcatataaggattggtgaatatcacatcct 26877017  T
Q  415 cctctatgctgtttttctccttcaacacgtggattcccatttgtgcacgacttaatgttctaatctcatcctcgcttggattcaatgacctccctaacaa 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26877016 cctctatgctgtttttctccttcaacacgtggattcccatttgtgcacgacttaatgttctaatctcatcctcgcttggattcaatgacctccctaacaa 26876917  T
Q  515 cttaagctccacataaatccattcattttctaacagtacttcctccagttcacaaacgagtttcccgggataatcttggctatatagtctaatattttct 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26876916 cttaagctccacataaatccattcattttctaacagtacttcctccagttcacaaacgagtttcccgggataatcttggctatatagtctaatattttct 26876817  T
Q  615 tccaatcccaaatcaaatagacatgtatgattcggttcaaagcggaaagggcaacaacgcatcaaacaatattcacagccattgacaaacaaattgactc 714  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26876816 tccaatctcaaatcaaatagacatgtatgattcggttcaaagcggaaagggcaacaacgcatcaaacaatattcacagccattgacaaacaaattgactc 26876717  T
Q  715 ttacgctaatcacatcattacaaaatccaagaag 748  Q
    ||||| ||||||||||||||||||||||||||||    
T  26876716 ttacgttaatcacatcattacaaaatccaagaag 26876683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 362 - 462
Target Start/End: Complemental strand, 26638913 - 26638813
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgca 461  Q
    |||||||||||  ||||||||| |  |||||||||||||||||||||||||||||||  || || |||||||||| || ||||||||||||||| |||||    
T  26638913 atattcatctaattttctctttctattataaggattggtgaatatcacatcctcctccgtgttgcttttctcctttaaaacgtggattcccattggtgca 26638814  T
Q  462 c 462  Q
    |    
T  26638813 c 26638813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 362 - 462
Target Start/End: Complemental strand, 26744879 - 26744779
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgca 461  Q
    |||||||||||  ||||||||| |  |||||||||||||||||||||||||||||||  || || |||||||||| || ||||||||||||||| |||||    
T  26744879 atattcatctaattttctctttctattataaggattggtgaatatcacatcctcctccgtgttgcttttctcctttaaaacgtggattcccattggtgca 26744780  T
Q  462 c 462  Q
    |    
T  26744779 c 26744779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 480
Target Start/End: Complemental strand, 26626605 - 26626514
Alignment:
Q  389 ataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcacgacttaatgttctaatct 480  Q
    |||||||||||||||||| |||||||| ||| || || |||||||||||||||| |||||||||||||||||||  |||||| || ||||||    
T  26626605 ataaggattggtgaatatgacatcctcatctgtgttgcttttctccttcaacacatggattcccatttgtgcactccttaatattttaatct 26626514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 480
Target Start/End: Complemental strand, 26732582 - 26732491
Alignment:
Q  389 ataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcacgacttaatgttctaatct 480  Q
    |||||||||||||||||| |||||||| ||| || || |||||||||||||||| |||||||||||||||||||  |||||| || ||||||    
T  26732582 ataaggattggtgaatatgacatcctcatctgtgttgcttttctccttcaacacatggattcccatttgtgcactccttaatattttaatct 26732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 26827353 - 26827272
Alignment:
Q  375 tttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccattt 456  Q
    ||||||||| |  ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||| ||||    
T  26827353 tttctctttctactataaggattggtgaatatcacatcctcctccatgctccttttctccttcaacacgtgaattccaattt 26827272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 459
Target Start/End: Complemental strand, 26888314 - 26888243
Alignment:
Q  388 tataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtg 459  Q
    ||||||||||||||||||||||||||||||| ||| |   ||||||||||||||| |  |||||||||||||    
T  26888314 tataaggattggtgaatatcacatcctcctccatgtttcctttctccttcaacacttcaattcccatttgtg 26888243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 31288064 - 31287987
Alignment:
Q  388 tataaggattggtgaatatcacat---cctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    |||| |||| ||||||||||||||   ||||||||  | ||||||||||||| |||||||||||||||||||||||||    
T  31288064 tatatggatcggtgaatatcacattctcctcctctgcgttgtttttctcctttaacacgtggattcccatttgtgcac 31287987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 362 - 462
Target Start/End: Complemental strand, 26806031 - 26805931
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgca 461  Q
    ||||||||||   ||| ||||| | ||||||||||||||||||| ||||| ||||||  || || |||||||| | |||||||||||||| ||||| |||    
T  26806031 atattcatctgattttgtctttctaatataaggattggtgaataccacattctcctccgtgttgcttttctccattaacacgtggattccgatttgagca 26805932  T
Q  462 c 462  Q
    |    
T  26805931 c 26805931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 28789849 - 28789775
Alignment:
Q  388 tataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    ||||||||| |||||||||||||| |||||||  | || ||||||||||   |||||||||||||||||| ||||    
T  28789849 tataaggatcggtgaatatcacattctcctctgcgttgcttttctccttactcacgtggattcccatttgcgcac 28789775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 462
Target Start/End: Complemental strand, 28795863 - 28795793
Alignment:
Q  392 aggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    ||||| |||||||||||||| |||||||  | || |||||||||||  |||||||||||||||||| ||||    
T  28795863 aggatcggtgaatatcacattctcctctgcgttgcttttctccttcctcacgtggattcccatttgcgcac 28795793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 27657419 - 27657494
Alignment:
Q  387 atataaggattggtgaatatcacatcctcctct---atgctgtttttctccttcaacacgtggattcccatttgtg 459  Q
    ||||||||||  ||||||| ||||||||||||    ||| || |||||| ||||||||||||||||||||||||||    
T  27657419 atataaggatcagtgaataccacatcctcctcatccatgttgcttttcttcttcaacacgtggattcccatttgtg 27657494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 462
Target Start/End: Complemental strand, 26888427 - 26888393
Alignment:
Q  428 tttctccttcaacacgtggattcccatttgtgcac 462  Q
    |||||||||||||||||||||||| ||||||||||    
T  26888427 tttctccttcaacacgtggattccaatttgtgcac 26888393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 26059366 - 26059309
Alignment:
Q  400 tgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttg 457  Q
    ||||| ||||| || |||| ||| || ||||||||||| |||||||||||||||||||    
T  26059366 tgaatctcacacccccctccatgttgcttttctccttccacacgtggattcccatttg 26059309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 26079336 - 26079279
Alignment:
Q  400 tgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttg 457  Q
    ||||| ||||| || |||| ||| || ||||||||||| |||||||||||||||||||    
T  26079336 tgaatctcacacccccctccatgttgcttttctccttccacacgtggattcccatttg 26079279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 18720791 - 18720885
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccattt 456  Q
    |||||||||||  ||||||||| |  |||||||||||||||||||||||||||| |   || |||||||||||||||||||||||||||||||||    
T  18720791 atattcatctaattttctctttctactataaggattggtgaatatcacatcctcattcgtgttgtttttctccttcaacacgtggattcccattt 18720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 18676261 - 18676361
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgca 461  Q
    |||||||||||  ||||||||| |  |||||||||||||||||||||||||||| |   || |||||||||||||  |||||||||||||||||| ||||    
T  18676261 atattcatctatttttctctttctactataaggattggtgaatatcacatcctcattcgtgttgtttttctccttgcacacgtggattcccatttttgca 18676360  T
Q  462 c 462  Q
    |    
T  18676361 c 18676361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 18652203 - 18652297
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccattt 456  Q
    |||||||||||  ||||||||| |  ||||||||||  |||||||||||||||| |   || |||||||||||||||||||||||||||||||||    
T  18652203 atattcatctaattttctctttctactataaggattaatgaatatcacatcctcattcgtgttgtttttctccttcaacacgtggattcccattt 18652297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 18686301 - 18686395
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccattt 456  Q
    |||||||||||  ||||||||| |  |||||| ||||||||||||||||||||| |   || |||||||||||||| ||||||||||||||||||    
T  18686301 atattcatctaattttctctttctactataagaattggtgaatatcacatcctcattcgtgttgtttttctccttccacacgtggattcccattt 18686395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 18696107 - 18696201
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccattt 456  Q
    |||||||||||  | ||||||| |  |||||||||||||||||||||||||||| | |||| |  ||||||||||| ||||||||||||||||||    
T  18696107 atattcatctaattctctctttctactataaggattggtgaatatcacatcctcatttatgttacttttctccttccacacgtggattcccattt 18696201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 458
Target Start/End: Original strand, 18650567 - 18650638
Alignment:
Q  388 tataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaac-acgtggattcccatttgt 458  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| ||| ||| | ||||||||| ||||||    
T  18650567 tataaggattggtgaatatcacatcctgctctatgctgcttttcttcttgaacaaagtggattccaatttgt 18650638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 18728227 - 18728321
Alignment:
Q  362 atattcatctagctttctctttttcatataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccattt 456  Q
    |||||||||||  ||||||| | |  |||||||||||||||||||||||||||| |   || |||||||||||||   |||||||||||||||||    
T  18728227 atattcatctaattttctctatctactataaggattggtgaatatcacatcctcattcgtgttgtttttctccttgcgcacgtggattcccattt 18728321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 388 - 456
Target Start/End: Original strand, 18718786 - 18718855
Alignment:
Q  388 tataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacac-gtggattcccattt 456  Q
    |||||||||||| |||||||||||||| |||||||||| |||||| ||| ||||| ||||||||| ||||    
T  18718786 tataaggattggagaatatcacatcctgctctatgctgcttttcttcttgaacacagtggattccaattt 18718855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 18692303 - 18692366
Alignment:
Q  388 tataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacac-gtggattc 450  Q
    ||||||||||| ||||||||||||||| ||| ||||| ||||||| ||| ||||| ||||||||    
T  18692303 tataaggattgatgaatatcacatcctgctccatgctttttttcttcttgaacacagtggattc 18692366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 10350 - 10424
Alignment:
Q  388 tataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    ||||||||| |||||||||||||| |||||||  | || ||||||||||   |||||||||||||||||| ||||    
T  10350 tataaggatcggtgaatatcacattctcctctgcgttgcttttctccttactcacgtggattcccatttgcgcac 10424  T

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Target: scaffold0277; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 1394 - 1464
Alignment:
Q  392 aggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    ||||| |||||||||||| | |||||||  | || |||||||| ||  |||||||||||||||||||||||    
T  1394 aggatcggtgaatatcacgttctcctctgcgttgcttttctccatcctcacgtggattcccatttgtgcac 1464  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 29766703 - 29766647
Alignment:
Q  405 atcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgca 461  Q
    |||||||||||||| || ||| || || |||||||||| ||||||||||||||||||    
T  29766703 atcacatcctcctccatactgcttatcgccttcaacacatggattcccatttgtgca 29766647  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 265010 - 265088
Alignment:
Q  387 atataaggattggtgaatatcacat---cctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    |||||||||||||||||||| ||||   |||||||  || || |||||||| | ||| |||||||||||||||||||||    
T  265010 atataaggattggtgaatataacattatcctcctccctgttgcttttctccattaactcgtggattcccatttgtgcac 265088  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 459
Target Start/End: Complemental strand, 26139506 - 26139436
Alignment:
Q  389 ataaggattggtgaatatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtg 459  Q
    ||||||||| |||||||  ||||||||||| |||||  |||||||||| ||||  |||||||| |||||||    
T  26139506 ataaggattagtgaatacgacatcctcctccatgcttcttttctccttgaacatatggattccaatttgtg 26139436  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 10675160 - 10675106
Alignment:
Q  405 atcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtg 459  Q
    |||||||||||||| ||   ||||||| |||||||||| ||||||||||||||||    
T  10675160 atcacatcctcctccatatcgtttttcgccttcaacacatggattcccatttgtg 10675106  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 18514634 - 18514576
Alignment:
Q  404 tatcacatcctcctctatgctgtttttctccttcaacacgtggattcccatttgtgcac 462  Q
    ||||||||||||||| || ||| ||||| |||||||||| | ||||| |||||||||||    
T  18514634 tatcacatcctcctccatactgcttttcgccttcaacacatagattctcatttgtgcac 18514576  T

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