View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9006_low_29 (Length: 240)
Name: NF9006_low_29
Description: NF9006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9006_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 41130747 - 41130969
Alignment:
| Q |
1 |
tttaccttccgactaaaatttggatcaccaatatccttttcttagaaacatgaaggttaaagataaaaggacagatcgatcaatataattattaaaacca |
100 |
Q |
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| T |
41130747 |
tttaccttccgactaaaatttggatcaccaatatccttttcttagaaacatgaaggttaaagataaaaggacaaatcgatcaatataattataaaaatta |
41130846 |
T |
|
| Q |
101 |
aataagaaagatggaacgtaccgttttgaaggaagagactataatagtaattatgatttggagacgatatcaaagaggaggtaaactaggttagcaaata |
200 |
Q |
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| T |
41130847 |
aataagaaagatggaacgtaccgttttgaaggaagagactataatagtaattatgatttggagacgatatcaaagaggaggtaaactaggttagcacata |
41130946 |
T |
|
| Q |
201 |
caaagaagaggagaaggagaaat |
223 |
Q |
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|||||||||||||||||||||| |
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| T |
41130947 |
gaaagaagaggagaaggagaaat |
41130969 |
T |
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