View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9008_low_3 (Length: 610)

Name: NF9008_low_3
Description: NF9008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9008_low_3
NF9008_low_3
[»] scaffold0054 (2 HSPs)
scaffold0054 (11-592)||(53909-54490)
scaffold0054 (86-194)||(53879-53987)
[»] chr6 (67 HSPs)
chr6 (102-588)||(29084232-29084718)
chr6 (86-592)||(29834425-29834931)
chr6 (86-592)||(29865859-29866365)
chr6 (86-588)||(29897296-29897793)
chr6 (86-588)||(29881649-29882151)
chr6 (86-588)||(29908805-29909307)
chr6 (91-592)||(24264040-24264541)
chr6 (86-588)||(29072977-29073479)
chr6 (86-588)||(29105550-29106052)
chr6 (86-588)||(29928487-29928989)
chr6 (86-588)||(29893767-29894269)
chr6 (155-588)||(29211430-29211863)
chr6 (86-592)||(29348881-29349387)
chr6 (91-592)||(29366709-29367210)
chr6 (87-579)||(29886520-29887012)
chr6 (88-588)||(29098557-29099057)
chr6 (88-588)||(29115475-29115975)
chr6 (160-588)||(28927339-28927767)
chr6 (91-449)||(29902609-29902967)
chr6 (91-460)||(24272235-24272604)
chr6 (90-474)||(24886808-24887192)
chr6 (86-588)||(24890529-24891031)
chr6 (122-588)||(29904867-29905319)
chr6 (91-262)||(29358267-29358438)
chr6 (96-588)||(24730069-24730561)
chr6 (235-584)||(24711356-24711705)
chr6 (86-273)||(29889049-29889236)
chr6 (110-362)||(31000245-31000497)
chr6 (108-522)||(25450188-25450602)
chr6 (413-588)||(30118942-30119117)
chr6 (11-82)||(29084633-29084704)
chr6 (238-437)||(29945997-29946196)
chr6 (11-89)||(29073371-29073449)
chr6 (11-89)||(29105944-29106022)
chr6 (11-89)||(29894161-29894239)
chr6 (108-400)||(15727473-15727765)
chr6 (118-417)||(24739510-24739809)
chr6 (150-281)||(25450639-25450770)
chr6 (118-417)||(24934052-24934351)
chr6 (15-89)||(29098951-29099025)
chr6 (15-89)||(29115869-29115943)
chr6 (109-405)||(16702324-16702620)
chr6 (201-417)||(21161023-21161239)
chr6 (281-383)||(29876244-29876346)
chr6 (494-588)||(34785631-34785725)
chr6 (19-90)||(29366742-29366813)
chr6 (148-340)||(30153962-30154154)
chr6 (288-367)||(15715472-15715551)
chr6 (541-588)||(24272617-24272664)
chr6 (11-78)||(29834834-29834901)
chr6 (11-78)||(29866268-29866335)
chr6 (11-90)||(29882042-29882121)
chr6 (11-90)||(29902863-29902942)
chr6 (11-90)||(29909198-29909277)
chr6 (11-89)||(24264065-24264143)
chr6 (11-89)||(24272260-24272338)
chr6 (287-417)||(24941585-24941715)
chr6 (11-89)||(29348911-29348989)
chr6 (19-82)||(16702339-16702402)
chr6 (11-90)||(29889127-29889206)
chr6 (11-70)||(29928900-29928959)
chr6 (11-89)||(29358292-29358370)
chr6 (47-88)||(29886906-29886947)
chr6 (32-88)||(25450517-25450573)
chr6 (285-349)||(29954103-29954167)
chr6 (154-230)||(30028710-30028786)
chr6 (203-367)||(30578168-30578332)
[»] scaffold0237 (3 HSPs)
scaffold0237 (86-592)||(21553-22059)
scaffold0237 (11-89)||(21951-22029)
scaffold0237 (539-588)||(340-389)
[»] chr2 (2 HSPs)
chr2 (108-588)||(15063181-15063661)
chr2 (17-101)||(15063195-15063279)
[»] chr3 (5 HSPs)
chr3 (108-588)||(24219540-24220020)
chr3 (108-381)||(16350471-16350744)
chr3 (147-525)||(11990589-11990967)
chr3 (15-88)||(24219552-24219625)
chr3 (283-367)||(24226108-24226192)
[»] chr1 (7 HSPs)
chr1 (130-592)||(10129347-10129809)
chr1 (124-400)||(4260638-4260914)
chr1 (124-400)||(4264260-4264536)
chr1 (108-381)||(41315690-41315963)
chr1 (165-367)||(19489685-19489887)
chr1 (285-399)||(17250716-17250830)
chr1 (30-93)||(17250917-17250980)
[»] scaffold0654 (1 HSPs)
scaffold0654 (108-336)||(1525-1753)
[»] scaffold0014 (5 HSPs)
scaffold0014 (110-383)||(136793-137066)
scaffold0014 (148-405)||(105083-105340)
scaffold0014 (148-336)||(139764-139952)
scaffold0014 (108-345)||(121776-122013)
scaffold0014 (453-525)||(136651-136723)
[»] scaffold0051 (1 HSPs)
scaffold0051 (102-520)||(43586-44004)
[»] scaffold0429 (1 HSPs)
scaffold0429 (108-345)||(5653-5890)
[»] scaffold0019 (2 HSPs)
scaffold0019 (108-336)||(126428-126656)
scaffold0019 (433-509)||(126753-126829)
[»] scaffold0308 (2 HSPs)
scaffold0308 (102-336)||(8461-8695)
scaffold0308 (453-509)||(8288-8344)
[»] scaffold0572 (1 HSPs)
scaffold0572 (108-525)||(2508-2925)
[»] scaffold1840 (1 HSPs)
scaffold1840 (108-525)||(686-1103)
[»] scaffold0177 (1 HSPs)
scaffold0177 (108-523)||(26633-27048)
[»] chr7 (1 HSPs)
chr7 (147-336)||(3642503-3642692)
[»] scaffold0086 (1 HSPs)
scaffold0086 (108-336)||(31610-31837)
[»] chr8 (1 HSPs)
chr8 (288-367)||(13905083-13905162)
[»] scaffold0652 (1 HSPs)
scaffold0652 (288-345)||(5871-5928)


Alignment Details
Target: scaffold0054 (Bit Score: 534; Significance: 0; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 11 - 592
Target Start/End: Original strand, 53909 - 54490
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacattaggtttaatgtcttgtatca 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53909 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacattaggtttaatgtcttgtatca 54008  T
Q  111 tcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttc 210  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54009 tcatcatatctaacacatttttagcttttttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttc 54108  T
Q  211 caatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaatt 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  54109 caatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaaccctctaattaaagcactgtaagtaacaacatcgggagaaatt 54208  T
Q  311 ctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagct 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54209 ctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttatacataccatcaataacggtattgtacattaccgcattaagct 54308  T
Q  411 gaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggtt 510  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  54309 gaaccaattttccatcaacacgtctcagcaattgcagagctgctcttgtttcaccaactttacacaagccattaatcaaggttccataactaacttggtc 54408  T
Q  511 gaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacccttaatg 592  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54409 caaatgaaatccaagcgctaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagaaacccttaatg 54490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 53879 - 53987
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||||||||||||| ||||| ||||||||||||| |||||| |||||  |||||||| | |||  |||||||||||||||||||| ||| ||||||| |    
T  53879 acattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaag 53978  T
Q  186 tatacacat 194  Q
    || ||||||    
T  53979 tagacacat 53987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 102 - 588
Target Start/End: Complemental strand, 29084718 - 29084232
Alignment:
Q  102 cttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggttt 201  Q
    ||||| ||||||||||||| |||||| |||||  |||||||| | |||  |||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  29084718 cttgtttcatcatcatagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatatattaaaagtatacccatccggttt 29084619  T
Q  202 gatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcg 301  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |    
T  29084618 gatgttttccaatattattttattaaacagatcaattgcatctttcagtttaccaacaacgaaaaacccactaattaaagcactgtaagtaacaacattg 29084519  T
Q  302 ggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccg 401  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29084518 ggagaaattcccttagaaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccataaataacggtattgtacattaccg 29084419  T
Q  402 cattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataact 501  Q
    ||||||||||||||||||| |||||||| |||   ||||| |  || ||| |||||||||| || || ||||| |||||||  |||||| ||||||||||    
T  29084418 cattaagctgaaccaatttaccatcaactcgttggagcaagtcaagggctgctcttgtttctcctaccttacataagccatggatcaaggttccataact 29084319  T
Q  502 aacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  29084318 aacttggtccaaatgaaatccaagcgctaccagcttgtcatgaaagagaaatgcttgatggatctgacctttgagacagagaccctt 29084232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 86 - 592
Target Start/End: Complemental strand, 29834931 - 29834425
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||| ||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||   ||||||||||||||||| ||||||| |||||||||||||    
T  29834931 acattgggtttcatgccttgtttcatcatcatagctaacacatttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaagg 29834832  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||| ||| || ||||||||||||||| |||||||||| |||| | ||||||||||||||| ||||||||||||| |||| |||||||| ||||||||    
T  29834831 tatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccactaatcaaagcatt 29834732  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    |||||| | |||||| || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    
T  29834731 gtaagtgaaaacatcaggggaaattctcttagaaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcgataatg 29834632  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    ||||||||||||||| || || ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29834631 gtattgtacattaccacactaggctgaaccaatttcccatctacacgtctcagcaattgcagagctgctcttgtttcaccaactttacacaagccattaa 29834532  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | ||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  29834531 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatctgacctttgagacagaaacc 29834432  T
Q  586 cttaatg 592  Q
    |||||||    
T  29834431 cttaatg 29834425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 86 - 592
Target Start/End: Complemental strand, 29866365 - 29865859
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||| ||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||   ||||||||||||||||| ||||||| |||||||||||||    
T  29866365 acattgggtttcatgccttgtttcatcatcatagctaacacatttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaagg 29866266  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||| ||| || ||||||||||||||| |||||||||| |||| | ||||||||||||||| ||||||||||||| |||| |||||||| ||||||||    
T  29866265 tatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccactaatcaaagcatt 29866166  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    |||||| | |||||| || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    
T  29866165 gtaagtgaaaacatcaggggaaattctcttagaaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcgataatg 29866066  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    ||||||||||||||| || || ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29866065 gtattgtacattaccacactaggctgaaccaatttcccatctacacgtctcagcaattgcagagctgctcttgtttcaccaactttacacaagccattaa 29865966  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | ||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  29865965 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatctgacctttgagacagaaacc 29865866  T
Q  586 cttaatg 592  Q
    |||||||    
T  29865865 cttaatg 29865859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29897793 - 29897296
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||     |||||||||||||||||||||||  ||||| ||||||    
T  29897793 acattaggtttaatgtcttgtttcatcatcatagcaaacacatttttagcttctttca----cccttccttacaaaatccatcaac-catatactaaagg 29897699  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||||||  ||||||||| ||||||||||||||| |||| | ||||||||||||||| ||||||||||||| |||| ||| ||||||||||| |    
T  29897698 tatacacatccgggatgatgtttttcaatatcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccaataattaaagcact 29897599  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29897598 gtaagtaacaacaccgggataaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcaataacg 29897499  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||  || |||||| |||||||||||||||||| ||| |||||||    
T  29897498 gtattgtacattaccgcattaagctgaaccaatttaccatcaactcgtcggagcaattcaagggcttcttttgtttcaccaactttacccaacccattaa 29897399  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | |||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  29897398 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttgtcatgaaagtgcaatgcttgatggatctgacctttgagacagagaac 29897299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29882151 - 29881649
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  29882151 acatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaagg 29882052  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |    
T  29882051 tatacacattcggattgatgttttccaatatcattttattaaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcact 29881952  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
     ||||| |||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||      
T  29881951 ataagtgacaacattaggagaaattctctttgcagccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacatgctatcaataatc 29881852  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    | | ||||||||||||||| |||||||||||||||||||||||| ||||  |||||||  || ||| |||||||||||||||||||||||||||||||||    
T  29881851 gaactgtacattaccgcatcaagctgaaccaattttccatcaacccgtcggagcaattcaagggctgctcttgtttcaccaactttacacaagccattaa 29881752  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | ||| |||||||||| ||||||||||||||| | |||||||||||| |||||    
T  29881751 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatgtcacctttgagacaaagacc 29881652  T
Q  586 ctt 588  Q
    |||    
T  29881651 ctt 29881649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29909307 - 29908805
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  29909307 acatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaagg 29909208  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |    
T  29909207 tatacacattcggattgatgttttccaatatcattttattaaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcact 29909108  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
     ||||| |||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||      
T  29909107 ataagtgacaacattaggagaaattctctttgcagccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacatgctatcaataatc 29909008  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    | | ||||||||||||||| |||||||||||||||||||||||| ||||  |||||||  || ||| |||||||||||||||||||||||||||||||||    
T  29909007 gaactgtacattaccgcatcaagctgaaccaattttccatcaacccgtcggagcaattcaagggctgctcttgtttcaccaactttacacaagccattaa 29908908  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | ||| |||||||||| ||||||||||||||| | |||||||||||| |||||    
T  29908907 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatgtcacctttgagacaaagacc 29908808  T
Q  586 ctt 588  Q
    |||    
T  29908807 ctt 29908805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 91 - 592
Target Start/End: Original strand, 24264040 - 24264541
Alignment:
Q  91 aggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatac 190  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  24264040 aggtttaatgccttgtttcatcatcatagctaacccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatac 24264139  T
Q  191 acatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaag 290  Q
    ||||| || |||||||||||| || |||||||||| |||| | ||||||||||||||| ||||||||||||| |||| ||||||||||||||| | ||||    
T  24264140 acatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccactaattaaagcactataag 24264239  T
Q  291 taacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtatt 390  Q
    | |||| || || |||||||||| | | |||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||  ||| |    
T  24264240 tgacaatattggaagaaattctcctagaaaccatttcagaatataaatcaaaagcatcattaacatttttatctttacacatactatcaataatcgtact 24264339  T
Q  391 gtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaag 490  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||  |||||||  || ||| |||||||||| || || |||||||||||||||||||||    
T  24264340 gtacattaccacatcaagctgaaccaattttccatcaactcgtcgtagcaattcaagggctgctcttgtttctcctaccttacacaagccattaatcaag 24264439  T
Q  491 attccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacccttaa 590  Q
     ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24264440 gttccataactaacttggtccaaatgaaatccaagcgctaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagaaacccttaa 24264539  T
Q  591 tg 592  Q
    ||    
T  24264540 tg 24264541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29073479 - 29072977
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||||||||||||| ||||| ||||||||||||| |||||| |||||  |||||||| | |||| |||||||||||||||||||| ||||||||||| |    
T  29073479 acattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaag 29073380  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29073379 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcact 29073280  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    ||||||||||||||| |||||||||| ||  | ||||||||||||||||||||||||||| ||||||||| ||||| ||||  |||| | |||||||| |    
T  29073279 gtaagtaacaacatcaggagaaattccctcagaaaccatttcagaatataaatcaaaagcttcattaacaagtttaactttgcacatgctatcaataatg 29073180  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    || |||||||||||| ||||| | ||||||||||| ||||| || |||||||||||||||| |||| |||||| ||  ||||||||||| || |||||||    
T  29073179 gtgttgtacattaccacattaggttgaaccaatttaccatcgactcgtctcagcaattgcaaagctgctcttgcttgtccaactttacataacccattaa 29073080  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||    
T  29073079 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaaccaccttatcatgaaagtgcaatgcttaatgaatctgacctttgagacagagacc 29072980  T
Q  586 ctt 588  Q
    |||    
T  29072979 ctt 29072977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29106052 - 29105550
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||||||||||||| ||||| ||||||||||||| |||||| |||||  |||||||| | |||| |||||||||||||||||||| ||||||||||| |    
T  29106052 acattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaag 29105953  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29105952 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcact 29105853  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    ||||||||||||||| |||||||||| ||  | ||||||||||||||||||||||||||| ||||||||| ||||| ||||  |||| | |||||||| |    
T  29105852 gtaagtaacaacatcaggagaaattccctcagaaaccatttcagaatataaatcaaaagcttcattaacaagtttaactttgcacatgctatcaataatg 29105753  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    || |||||||||||| ||||| | ||||||||||| ||||| || |||||||||||||||| |||| |||||| ||  ||||||||||| || |||||||    
T  29105752 gtgttgtacattaccacattaggttgaaccaatttaccatcgactcgtctcagcaattgcaaagctgctcttgcttgtccaactttacataacccattaa 29105653  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||    
T  29105652 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaaccaccttatcatgaaagtgcaatgcttaatgaatctgacctttgagacagagacc 29105553  T
Q  586 ctt 588  Q
    |||    
T  29105552 ctt 29105550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29928989 - 29928487
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  29928989 acatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaagg 29928890  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||| || |||  ||||||||| |||||||||||||||||| | ||||| ||||||||||| ||||||||||||| |||| ||||||||||||||| |    
T  29928889 tatacaaatacggaatgatgttttacaatatcattttattaaaaaaatcaaatgcatctttcaatttaccaacaatgcaaaatccactaattaaagcact 29928790  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
     ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    
T  29928789 ataagtgacaacattaggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcgataatg 29928690  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    ||||||||||||||| ||| | ||||||| |||||||||||||  ||||  |||||||  || ||| || ||||||||||||||||||||||||||||||    
T  29928689 gtattgtacattaccacatcaggctgaacaaattttccatcaaatcgtcggagcaattcaagggctgctattgtttcaccaactttacacaagccattaa 29928590  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | ||| |||||||||| ||||||||||||||| | |||||||||||| |||||    
T  29928589 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatgtcacctttgagacaaagacc 29928490  T
Q  586 ctt 588  Q
    |||    
T  29928489 ctt 29928487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 86 - 588
Target Start/End: Complemental strand, 29894269 - 29893767
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    ||||||||||||||| ||||| ||||||||||||| |||||| |||||  |||||||| | |||| |||||||||||||||||||| ||||||||||| |    
T  29894269 acattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaag 29894170  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |    
T  29894169 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttgaccaacagtgaaaaacccactaattaaagcact 29894070  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    |||||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    
T  29894069 gtaagtaacaacattgggagaaattcccttagaaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcgataatg 29893970  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    ||| ||||||||||| ||||| |||||||||| || |||||||| ||||| ||||| |  || ||| |||||||||| || || ||||| |||||||  |    
T  29893969 gtactgtacattaccacattaggctgaaccaaattaccatcaactcgtctgagcaagtcaagggctgctcttgtttctcctaccttacataagccatgga 29893870  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||| ||||||||  || |||||||| | | | ||||  || |||||||||  |||||||||||||||||||||||| ||||| |||||    
T  29893869 tcaaggttccataaccaacttggtccaattgaaatcccatcgcaaccacattatcatgaaagagcaatgcttgatggatctgacctttaagacaaagacc 29893770  T
Q  586 ctt 588  Q
    |||    
T  29893769 ctt 29893767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 155 - 588
Target Start/End: Original strand, 29211430 - 29211863
Alignment:
Q  155 ttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttac 254  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29211430 ttacaaaaaacatcaaccaatatattaaaagtatacacatccggtttgatgttttccgatatcattttattaaacagatcaactgcatctttcagtttac 29211529  T
Q  255 caacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaac 354  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  29211530 caacagtgaaaaacccactaattaaagcactgtaagtaacaacattgggagaaattcccttagaaaccatttcagaatataaatcaaaagcatcattaac 29211629  T
Q  355 atgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttct 454  Q
    ||||||||||||| |||||||||| |||| |||| ||||||||||| ||||| ||||||||||||| |||||||| ||||| ||||| |  || ||| ||    
T  29211630 atgtttatctttacacataccatcgataatggtactgtacattaccacattaggctgaaccaatttaccatcaactcgtctgagcaagtcaagggctgct 29211729  T
Q  455 cttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatg 554  Q
    |||||||| || || ||||| |||||||  |||||| | ||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  29211730 cttgtttctcctaccttacataagccatcgatcaaggtcccatagctaatttggttgaattgaaatccaagcgctaccagcttgtcatgaaagttcaatg 29211829  T
Q  555 cttgatggatctgacctttgagacagagaccctt 588  Q
    ||||||||||||||||||||||||| ||||||||    
T  29211830 cttgatggatctgacctttgagacaaagaccctt 29211863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 86 - 592
Target Start/End: Original strand, 29348881 - 29349387
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  29348881 acatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaagg 29348980  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||| || ||||| | |||| ||||||||||||| |||| | |||||||||| |||| |||||||| |||| |||| ||||||||||||||| |    
T  29348981 tatacacatcagggttgatttcttccgatatcattttattgaacaaaccaattgcatcattcaatttaccaagaatgcaaaaaccactaattaaagcact 29349080  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    |||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||| ||||| ||||  |||| | |||||||| |    
T  29349081 gtaagtaacaacatcgggagaaatccccttagaaaccatttcagaatataaatcaaaagcttcattaacaagtttaactttgcacatgctatcaataatg 29349180  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    || |||||||||||| ||||| | ||||||||||| |||||||| |||||||||||||||| |||| | |||||||  ||||||||||| || ||||| |    
T  29349181 gtgttgtacattaccacattaggttgaaccaatttaccatcaactcgtctcagcaattgcaaagctgcacttgtttgtccaactttacataacccattga 29349280  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||  | ||||||| ||||| ||| ||||||||||||||| | |||| ||| |||||||||| ||| |||||||| ||||||||||||||||| |||||    
T  29349281 tcaaagtcccataacaaactttgtttaaatgaaatccaagcgcaaccaccttatcatgaaagtgcaaggcttgatgaatctgacctttgagacacagacc 29349380  T
Q  586 cttaatg 592  Q
    |||||||    
T  29349381 cttaatg 29349387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 91 - 592
Target Start/End: Original strand, 29366709 - 29367210
Alignment:
Q  91 aggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatac 190  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||| ||||| ||||||    
T  29366709 aggtttaatgccttgtttcatcatcatagctagcacatttttagcttctttcaaccttctttccttacaaaatccatcaaccaatatgttaaaagtatac 29366808  T
Q  191 acatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaag 290  Q
    ||||  || ||||||||||| ||||||||||||||||||| |||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||    
T  29366809 acatttgggttgatgttttcgaatatcattttattaaacaaatcagttgcatctttcattttaccgacaatgcaaaagccactaattaaagcattgtaag 29366908  T
Q  291 taacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtatt 390  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||| | ||| ||||  |||| | |||||||| ||| ||    
T  29366909 taacaacatcgggagaaatccccttagaaaccatttcagaatataaatcaaaagcttcattaacaagcttaactttgcacatgctatcaataatggtgtt 29367008  T
Q  391 gtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaag 490  Q
    |||||||||| ||||| | ||||||||||| |||||||| |||||||||||||||| |||| | |||||||  ||||||||||| || ||||| |||||     
T  29367009 gtacattaccacattaggttgaaccaatttaccatcaactcgtctcagcaattgcaaagctgcacttgtttgtccaactttacataacccattgatcaaa 29367108  T
Q  491 attccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacccttaa 590  Q
     | ||||||||||||| ||| ||||||||||||||| | |||| ||| |||||||| | ||| |||||||| ||||||||||||||||| ||||||||||    
T  29367109 gtcccataactaactttgttcaaatgaaatccaagcgcaaccaccttatcatgaaactgcaaggcttgatgaatctgacctttgagacacagacccttaa 29367208  T
Q  591 tg 592  Q
    ||    
T  29367209 tg 29367210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 87 - 579
Target Start/End: Complemental strand, 29887012 - 29886520
Alignment:
Q  87 cattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggt 186  Q
    ||||||| || ||| ||||| |||||||||||||||||||||||||||  ||||| |   ||||||||||||||||| ||||||| ||||||||||| ||    
T  29887012 cattaggattgatgccttgtttcatcatcatagctaacacatttttagcctcttttacgtttccttccttacaaaatgcatcaaccaatatattaaaagt 29886913  T
Q  187 atacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattg 286  Q
    |||||||   || |||||||||| | || |||||||||| || | |||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  29886912 atacacagttgggttgatgtttttcgatgtcattttattgaataaatcagttgcatctttcaatttaccaacaatgcaaaagccactaattaaagcattg 29886813  T
Q  287 taagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacgg 386  Q
    ||||| | |||||||||  |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||    
T  29886812 taagtgaaaacatcggggaaaattctcttagaagccatttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcgataatgg 29886713  T
Q  387 tattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaat 486  Q
    |||||||||||||| ||| | |||||||||||||||||||||| ||||  |||||||  || ||| || |||||||||||||||||||||||||||||||    
T  29886712 tattgtacattaccacatcaggctgaaccaattttccatcaactcgtcggagcaattcaagggctgcttttgtttcaccaactttacacaagccattaat 29886613  T
Q  487 caagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagaca 579  Q
    |||| ||||||||| ||||| ||  ||||||||||| | | | |  | ||| |||||||||| ||||||||||||||| | ||||||||||||    
T  29886612 caaggttccataaccaactttgtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatgtcacctttgagaca 29886520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 88 - 588
Target Start/End: Complemental strand, 29099057 - 29098557
Alignment:
Q  88 attaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggta 187  Q
    ||||||||| ||| ||||| ||||||||||| | |||||| |||||  |||||||| | |||| |||||||||||| ||| ||| ||||||||||| |||    
T  29099057 attaggtttgatgccttgtttcatcatcatatcaaacacagttttaccttctttcatctttccgtccttacaaaatgcattaaccaatatattaaaagta 29098958  T
Q  188 tacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgt 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |||    
T  29098957 tacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaagaatgcaaaaaccactaattaaagcactgt 29098858  T
Q  288 aagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggt 387  Q
    |||||||||||||||||||||| | ||| | ||||||||||||| ||||||||||||| ||||||||| ||||| ||||  |||| | |||||||| |||    
T  29098857 aagtaacaacatcgggagaaatccccttagaaaccatttcagaaaataaatcaaaagcttcattaacaagtttaactttgcacatgctatcaataatggt 29098758  T
Q  388 attgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatc 487  Q
     |||||||||||| ||||| |||||||||| || |||||||| |||   || || |  || ||| |||||||||| || || ||||| |||||||  |||    
T  29098757 gttgtacattaccacattaggctgaaccaaattaccatcaactcgttggagtaagtcaagggctgctcttgtttctcctaccttacataagccatggatc 29098658  T
Q  488 aagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccct 587  Q
    ||| | ||||| |||| ||||| |||||||||||||||| | |||| ||| |||||||||   |||||||| |||||||||||||||||||| |||||||    
T  29098657 aaggtcccatagctaatttggtcgaaatgaaatccaagcgccaccaccttatcatgaaagagaaatgcttgctggatctgacctttgagacaaagaccct 29098558  T
Q  588 t 588  Q
    |    
T  29098557 t 29098557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 88 - 588
Target Start/End: Complemental strand, 29115975 - 29115475
Alignment:
Q  88 attaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggta 187  Q
    ||||||||| ||| ||||| ||||||||||| | |||||| |||||  |||||||| | |||| |||||||||||| ||| ||| ||||||||||| |||    
T  29115975 attaggtttgatgccttgtttcatcatcatatcaaacacagttttaccttctttcatctttccgtccttacaaaatgcattaaccaatatattaaaagta 29115876  T
Q  188 tacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgt 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||| |||    
T  29115875 tacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatcattcagtttaccaagaatgcaaaaaccactaattaaagcactgt 29115776  T
Q  288 aagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggt 387  Q
    |||||||||||||||||||||| | ||| | || |||||||||| ||||||||||||| ||||||||| ||||| ||||  |||| | |||||||| |||    
T  29115775 aagtaacaacatcgggagaaatccccttagaaatcatttcagaaaataaatcaaaagcttcattaacaagtttaactttgcacatgctatcaataatggt 29115676  T
Q  388 attgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatc 487  Q
     |||||||||||| ||||| |||||||||| || |||||||| |||   || || |  || ||| |||||||||| || || ||||| |||||||  |||    
T  29115675 gttgtacattaccacattaggctgaaccaaattaccatcaactcgttggagtaagtcaagggctgctcttgtttctcctaccttacataagccatggatc 29115576  T
Q  488 aagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccct 587  Q
    ||| | ||||| |||| ||||| |||||||||||||||| | |||| ||| |||||||||   |||||||| |||||||||||||||||||| |||||||    
T  29115575 aaggtcccatagctaatttggtcgaaatgaaatccaagcgccaccaccttatcatgaaagagaaatgcttgctggatctgacctttgagacaaagaccct 29115476  T
Q  588 t 588  Q
    |    
T  29115475 t 29115475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 160 - 588
Target Start/End: Original strand, 28927339 - 28927767
Alignment:
Q  160 aaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaaca 259  Q
    |||| ||||||  ||||||||||||||||||| ||  || ||||| |||||  |||||||||||| ||||| | |||||| ||| |||| |||||||| |    
T  28927339 aaatgcatcaatcaatatattaaaggtatacatatttgggttgatcttttctgatatcattttatgaaacaaaccaattgaatcattcaatttaccaaga 28927438  T
Q  260 atgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtt 359  Q
    ||| |||| ||||||||||||||| ||||||||||||| ||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||||| |||    
T  28927439 atgcaaaaaccactaattaaagcactgtaagtaacaacttcgggagaaatccccttagaaaccatttcagaatataaatcaaaagcttcattaacaagtt 28927538  T
Q  360 tatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgt 459  Q
    |||||||| |||||| ||||||||   || ||||||||||| ||| | | ||||||||||| |||||||| |||||||||||||||| |||| |||||||    
T  28927539 tatctttacacatactatcaataatcatagtgtacattaccacatcaggttgaaccaatttcccatcaactcgtctcagcaattgcaaagctgctcttgt 28927638  T
Q  460 ttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttga 559  Q
    ||  ||||||||||| || || || |||||| | ||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||| ||||||||||    
T  28927639 ttgtccaactttacataatccgttgatcaaggtcccataactaacatggttaaaacgaaatccaagcgctgccagcttgtcatgaaagtgcaatgcttga 28927738  T
Q  560 tggatctgacctttgagacagagaccctt 588  Q
    || ||||||||||| ||||| ||||||||    
T  28927739 tgaatctgacctttaagacacagaccctt 28927767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 91 - 449
Target Start/End: Complemental strand, 29902967 - 29902609
Alignment:
Q  91 aggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatac 190  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||| |||| ||||||    
T  29902967 aggtttgatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaaaccatcaaccaatatagtaaaagtatac 29902868  T
Q  191 acatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaag 290  Q
    ||||  || ||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||| ||||||||||||||| | ||||    
T  29902867 acatttgggttgatgttttcgaatatcattttattaaagaaatcaattgcatctctcagtttaccaacaatgcaaaatccactaattaaagcactataag 29902768  T
Q  291 taacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtatt 390  Q
    | |||||||  |||||| ||||| | | |||||||||| ||||||||||||||||||||||||||  |||| ||||  |||||||||||||||  |||||    
T  29902767 tgacaacattaggagaagttctcctagaaaccatttcaaaatataaatcaaaagcatcattaacaaatttacctttgcacataccatcaataatcgtatt 29902668  T
Q  391 gtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagag 449  Q
     ||||||||| ||||| ||||||||||||| | ||||||||||||||| ||||| ||||    
T  29902667 atacattaccacattaggctgaaccaatttccgatcaacacgtctcagtaattgtagag 29902609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 91 - 460
Target Start/End: Original strand, 24272235 - 24272604
Alignment:
Q  91 aggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatac 190  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  24272235 aggtttaatgccttgtttcatcatcatagctaacccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatac 24272334  T
Q  191 acatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaag 290  Q
    ||||| || |||||||||||| || |||||||||| |||| | ||||||||||||||| ||||||||||||| |||| ||| ||||||||||||| ||||    
T  24272335 acatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaaaccattaattaaagcattataag 24272434  T
Q  291 taacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtatt 390  Q
    |   |||||| ||  |||||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||  |||| | |||||||| ||| ||    
T  24272435 tgttaacatcagggaaaattctcttagaaaccatttcagaatataaatcaaaagcatcattatcaagtttatctttgcacatgctatcaataatggtgtt 24272534  T
Q  391 gtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtt 460  Q
    ||||||||||   ||| | |||| |||||| |||||||| |||||||||||||||| || | ||||||||    
T  24272535 gtacattaccaagttaggttgaagcaatttaccatcaactcgtctcagcaattgcaaaggtgctcttgtt 24272604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 90 - 474
Target Start/End: Original strand, 24886808 - 24887192
Alignment:
Q  90 taggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtata 189  Q
    ||||||| ||| | ||| |||||||||||| |||||||| ||||| |||||||| ||| ||||||||||||||  |||||||  ||||||||||||||||    
T  24886808 taggtttgatgccgtgtttcatcatcatagataacacatatttagcttctttcaccctaccttccttacaaaaagcatcaaccgatatattaaaggtata 24886907  T
Q  190 cacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaa 289  Q
    ||||||||| ||||| ||||||  | |||||||||| ||||   |||||| ||| |||| ||||||||||||| |||| ||||||||||||||| |||||    
T  24886908 cacatccgggttgatattttccgctgtcattttattgaacaacccaattgtatcattcaatttaccaacaatgcaaaaaccactaattaaagcactgtaa 24887007  T
Q  290 gtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtat 389  Q
    || | |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| |||      
T  24887008 gtgataacatcaggagaaattctcttcgcgaccatttcagaatataaatcaaaagcatcattaacaagtttacctttgcacataccatcaataatggtgc 24887107  T
Q  390 tgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttaca 474  Q
    ||||||||| | ||||| | ||||||||||| |||||||| |||||||||||||| |||||  |||||||||  |||||||||||    
T  24887108 tgtacattatcacattaggttgaaccaatttgccatcaactcgtctcagcaattgtagagcagctcttgtttgcccaactttaca 24887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 86 - 588
Target Start/End: Original strand, 24890529 - 24891031
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||| |||||| ||||| | | ||||||| |||||||||||   |||||  || |||| | |||||||||||||||| |||||||| | |||||||||||    
T  24890529 acatcaggttttatgtcgtctttcatcattatagctaacactactttagcatcattcacctttccttccttacaaaagccatcaaccagtatattaaagg 24890628  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||  || ||||||||||||  | |||||||||| |||| |||||||||||  |||| ||||  ||||  | |||| |||||||||||||||||    
T  24890629 tatacacatttgggttgatgttttcctttttcattttattgaacaaatcaattgcatagttcaatttagaaacagcggaaaaaccactaattaaagcatt 24890728  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    |||||| | |||||| ||  |||||||||| |||||||||| |||||||||||||||||||||||||||| | ||| ||||  |||||  ||||||||      
T  24890729 gtaagtgaaaacatcagggcaaattctcttagcaaccatttgagaatataaatcaaaagcatcattaacaagcttagctttgcacatattatcaataatc 24890828  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
     | |||||||||||||||||| ||||||| ||||| |||||||| ||| |||||||||| |||||  || || ||   ||||||||||| || || ||||    
T  24890829 atgttgtacattaccgcattaggctgaactaatttcccatcaactcgtttcagcaattggagagcagctgttattcgtccaactttacataatccgttaa 24890928  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| | ||||| ||||||||||  |||||||||||  |  |||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24890929 tcaaggtcccatagctaacttggtccaaatgaaatccctgtgctaccaccttatcatgaaagtgcaatgcttgatggatgtgacctttgagacagagacc 24891028  T
Q  586 ctt 588  Q
    |||    
T  24891029 ctt 24891031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 122 - 588
Target Start/End: Complemental strand, 29905319 - 29904867
Alignment:
Q  122 aacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattt 221  Q
    ||||||||||||| |||||| |   ||||||||||||||||| ||||||| |||||||||||||||||              ||||||||||| ||||||    
T  29905319 aacacatttttagcttcttttacttttccttccttacaaaatgcatcaacgaatatattaaaggtata--------------tgttttccaatgtcattt 29905234  T
Q  222 tattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaac 321  Q
    |||| || | | ||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||| | || ||| || ||||||||||| | |||    
T  29905233 tattgaaaaaaccaattgcatctttcaatttaccaacaatgcaaaagtcactaattaaagcattgtaagtgagaatatcaggggaaattctcttagaaac 29905134  T
Q  322 catttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaatttt 421  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||  | | ||||| ||||| ||| | | ||||||| ||||    
T  29905133 cattttagaatataaatcaaaagcatgattaacatgtttatctttacacatactatcaataatcgcaatgtactttaccacatcaggttgaaccagtttt 29905034  T
Q  422 ccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatc 521  Q
    |||||||| ||||  || ||||  || ||  || ||||||||||| ||||||||||| |||| |||||| |||||||||||| |||||  ||   |||||    
T  29905033 ccatcaactcgtcgtagtaattcaagggcggcttttgtttcaccagctttacacaagtcattgatcaaggttccataactaaattggtccaacataaatc 29904934  T
Q  522 caagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    |||   | ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  29904933 caattgcaaccagcttgtcatgaaagtgcaatgcttgatggatgtcacctttgagacagagaccctt 29904867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 29358267 - 29358438
Alignment:
Q  91 aggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatac 190  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  29358267 aggtttaatgccttgtatcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaactaatatagtaaaggtatac 29358366  T
Q  191 acatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatg 262  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29358367 acatccgggttgatgttttccaatatcattttattaaacagatcaactgcatctttcagtttaccaacaatg 29358438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 96 - 588
Target Start/End: Complemental strand, 24730561 - 24730069
Alignment:
Q  96 taatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatc 195  Q
    ||||||||| | ||||| ||| | ||||||   |||||| |||||||| | ||||||||||||||||  ||||||| |||||  |||| ||||||| |      
T  24730561 taatgtcttttttcatcgtcacacctaacatcattttagcttctttcacctttccttccttacaaaaagcatcaaccaatatgctaaatgtatacatacg 24730462  T
Q  196 cggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaaca 295  Q
     || ||||||||||| ||||||||||| |  |||| | ||| ||| ||||||| || ||| | |||| | || |||  |||||||  |||  |||| | |    
T  24730461 agggttgatgttttctaatatcattttgtgtaacaaaccaactgcctctttcaattgacccataatgcagaagccataaattaaactattacaagtgaaa 24730362  T
Q  296 acatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtaca 395  Q
     |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||| ||||  |||||  ||||||||   | |||||||    
T  24730361 tcatcaggagaaattctcttagcaaccatttgagaatataaatcaaaagcatcattaacaagcttagctttgcacatattatcaataatcatgttgtaca 24730262  T
Q  396 ttaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattcc 495  Q
    ||||||||||| ||||||| ||||| |||||||| ||| |||||||||| |||||  || || ||   ||||||||||| || || ||||||||| | ||    
T  24730261 ttaccgcattaggctgaactaatttcccatcaactcgtttcagcaattggagagcagctgttattcgtccaactttacataatccgttaatcaaggtccc 24730162  T
Q  496 ataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    ||| ||||||||||  |||||||||||  |  |||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24730161 atagctaacttggtccaaatgaaatccctgtgctaccaccttatcatgaaagttcaatgcttgatggatgtgacctttgagacagagaccctt 24730069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 235 - 584
Target Start/End: Complemental strand, 24711705 - 24711356
Alignment:
Q  235 aattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatat 334  Q
    ||||||||| |||| ||||||||||||| |||  ||||||||||||||| | ||||| |||||||| ||  |||||||||| ||| ||||||||||||||    
T  24711705 aattgcatcattcaatttaccaacaatgcaaacaccactaattaaagcactataagtgacaacatcagggcaaattctcttagcagccatttcagaatat 24711606  T
Q  335 aaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaacacgtc 434  Q
    |||||||| |||||||||||| |||||| |||  | | || ||||||||  ||  ||||||||||| ||||| | ||||||||||| ||||  || ||||    
T  24711605 aaatcaaatgcatcattaacaagtttatatttgcataaactatcaataattgtggtgtacattaccacattaggttgaaccaatttcccattgacccgtc 24711506  T
Q  435 tcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatccaagcactaccag 534  Q
    ||| ||||| | | ||  |||||||| |||||||||||||||| |||||||||||| | ||||| ||||||||||  |||||||| || |   ||||||     
T  24711505 tcaacaattcctgcgcagctcttgttgcaccaactttacacaacccattaatcaaggtcccatagctaacttggtccaaatgaaaacccaatgctaccac 24711406  T
Q  535 cttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagac 584  Q
    ||| | |||||||| |||||||||||||||||||||||||||||| ||||    
T  24711405 cttattatgaaagtgcaatgcttgatggatctgacctttgagacacagac 24711356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 86 - 273
Target Start/End: Complemental strand, 29889236 - 29889049
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||||| |||| |||||| || ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | ||| |||||||    
T  29889236 acattaagtttgatgtctcgtttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccattatgttaaagg 29889137  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccact 273  Q
    ||||||||| ||| |||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||| |||| |||||    
T  29889136 tatacacattcggattgatgttttccaatatcattttattaaaacaatcaattgcatctttcattttaccaacaatgcaaaatccact 29889049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 110 - 362
Target Start/End: Original strand, 31000245 - 31000497
Alignment:
Q  110 atcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtttt 209  Q
    |||||||| ||||| |||||||||| |||||||| ||| || ||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||    
T  31000245 atcatcatggctaatacatttttagcttctttcaccctaccatccttacaaaaaccatcaaccagtatattaaaggtatacacatccgggttgatgtttt 31000344  T
Q  210 ccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaat 309  Q
    ||  | |||||||||| |||| | |||||||||| |||| ||||  ||||    |||| ||||||||||||||||||||||| | ||||||  |   |||    
T  31000345 ccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagcagaaaaaccactaattaaagcattgtaagtgaaaacatcaaggccaat 31000444  T
Q  310 tctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttat 362  Q
    |||||| |||||||||||||||||||||||||||||||| || ||| ||||||    
T  31000445 tctcttagcaaccatttcagaatataaatcaaaagcatcgttgacaagtttat 31000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 108 - 522
Target Start/End: Complemental strand, 25450602 - 25450188
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    |||||||||  ||||||||   |||||  ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||   || ||||||||    
T  25450602 tcatcatcacggctaacactactttagcatctttcacctttccttccttacaaaatccatcaaccaatatattgaaggtatacacagttgggttgatgtt 25450503  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    |||| ||| |||| | ||||||| |  |||||||||||||| ||  ||||| ||| |||  |||  || || || ||||||||| | |||||  ||||||    
T  25450502 ttccgataccattatcttaaacaaactaattgcatctttcaattgtccaacgatgcaaaggccatgaagtagagtattgtaagtgataacattaggagaa 25450403  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaa 407  Q
    || ||||| |||| ||||||| ||||||||||||||||| | |||||| ||||||||||| |||| | ||||||||     |||||||||||  ||| |     
T  25450402 atcctcttagcaagcatttcataatataaatcaaaagcaacgttaacaagtttatctttacacattctatcaataagcacgttgtacattactacatgag 25450303  T
Q  408 gctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttg 507  Q
    ||||||||||||| ||||||||  |||||| ||  || || ||||||||||| || ||| ||||||| ||    ||||||||  | |||||||||| |||    
T  25450302 gctgaaccaatttaccatcaacctgtctcaacagctgtagggcttctcttgtctctccacctttacataatttgttaatcaatgtaccataactaatttg 25450203  T
Q  508 gttgaaatgaaatcc 522  Q
    ||| || ||||||||    
T  25450202 gttcaactgaaatcc 25450188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 413 - 588
Target Start/End: Original strand, 30118942 - 30119117
Alignment:
Q  413 accaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttga 512  Q
    ||||||||||||||||| ||||  |||||||  || ||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||  |    
T  30118942 accaattttccatcaactcgtcggagcaattcaagggctgcttttgtttcaccaactttacacaagccattaatcaaggttccataaccaactttgtcca 30119041  T
Q  513 aatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    |||||||||| | | | |  | ||| |||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  30119042 aatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatgtcacctttgagacaaagaccctt 30119117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 29084704 - 29084633
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagta 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29084704 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatatattaaaagta 29084633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 238 - 437
Target Start/End: Complemental strand, 29946196 - 29945997
Alignment:
Q  238 tgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaa 337  Q
    |||||| |||| || ||| |||||| |||| |||  ||||||||  |||||||| ||||  |  |||||||||||||| | |||||||||||||||||||    
T  29946196 tgcatcattcaattgacccacaatgcaaaagccatgaattaaagtgttgtaagttacaatgttcggagaaattctcttagtaaccatttcagaatataaa 29946097  T
Q  338 tcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctca 437  Q
    |||| | ||||||||||| ||||||||||  |||||||||||||||    | | ||||||||| ||| | | ||||||||||||| ||||||||||||||    
T  29946096 tcaacaacatcattaacaagtttatctttgcacataccatcaataatcacactatacattaccacatcaggttgaaccaattttctatcaacacgtctca 29945997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29073449 - 29073371
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  29073449 atagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaagtatacacat 29073371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29106022 - 29105944
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  29106022 atagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaagtatacacat 29105944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29894239 - 29894161
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  29894239 atagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaagtatacacat 29894161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 400
Target Start/End: Original strand, 15727473 - 15727765
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| ||||||||||| |||||| | | ||||||||||||| |   ||||||| ||||| ||||| ||||| | ||| || ||||||||    
T  15727473 tcatcatcacagctatcacatttttagcttctttgatctttccttccttacatagaacatcaaccaatatgttaaaagtataaatatctgggttgatgtt 15727572  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| ||  |||| | ||| ||| ||||||| || |||||||||| |||| ||   |||||||| |||| |||| | || ||  ||||||    
T  15727573 tttcaatagcatttgatagaacaaaccaaatgcttctttcaattgaccaacaatgcaaaatccgtaaattaaagaattgaaagtgataatattaggagaa 15727672  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattacc 400  Q
    |||||||||| || ||||||||||||||| ||| | |||||| | |||  ||||| |||| ||| || |||||| |  ||||||| |||||||    
T  15727673 attctctttgtaatcatttcagaatataactcataggcatcagttacaaatttatgtttacacaaactatcaatgatcgtattgtgcattacc 15727765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 417
Target Start/End: Original strand, 24739510 - 24739809
Alignment:
Q  118 agctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatc 217  Q
    ||||||||||||| ||| || ||||| |  |||||||||||| || |||||||| ||||||||||| ||||| |  || ||||| ||||||| ||| | |    
T  24739510 agctaacacatttctagcttttttcatctctccttccttacataaaccatcaaccaatatattaaatgtataaatgtctggtttaatgtttttcaacaac 24739609  T
Q  218 attttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttg 317  Q
    |||| ||| |||| | ||| ||| ||||||| |  ||| ||||| ||| | |||   ||||||| ||||||||| |  ||||| ||||||||||||||      
T  24739610 atttgattgaacaaaccaactgcttctttcaatcgacccacaatcaaacagccatacattaaagtattgtaagtgatgacatcaggagaaattctcttga 24739709  T
Q  318 caaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaa 417  Q
     || ||||| |||||||||||||||||||||| | ||| ||||||| ||  | | || || |||||  ||| ||||||| ||| ||||| ||||||||||    
T  24739710 gaagcatttgagaatataaatcaaaagcatcaattacaagtttatccttgcataaactataaataattgtactgtacatgaccacattaggctgaaccaa 24739809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 25450770 - 25450639
Alignment:
Q  150 cttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcag 249  Q
    |||||||||||||  ||||||| |||||| |||| |||||||||| ||| || |  ||| ||||||||||||||||||||| ||||| ||| |||||||     
T  25450770 cttccttacaaaaagcatcaaccaatatagtaaaagtatacacattcgggttaacctttcccaatatcattttattaaacaaatcaactgcttctttcaa 25450671  T
Q  250 tttaccaacaatgaaaaacccactaattaaag 281  Q
    ||||||||||||| |||| |||| ||||||||    
T  25450670 tttaccaacaatgcaaaagccacgaattaaag 25450639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 118 - 417
Target Start/End: Complemental strand, 24934351 - 24934052
Alignment:
Q  118 agctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatc 217  Q
    ||||||||||||| ||| || ||||| |  |||||||||||| || |||||||| ||||||||||| ||||| || || ||||| ||||||| ||| | |    
T  24934351 agctaacacatttctagcttttttcatctctccttccttacataaaccatcaaccaatatattaaatgtataaacgtctggtttaatgtttttcaacaac 24934252  T
Q  218 attttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttg 317  Q
    |||| ||| |||| | ||| ||| ||||||| |  ||| ||||| ||| | |||   |||| || | | ||||| |||||||| ||| ||||||||||      
T  24934251 atttgattgaacaaaccaactgcttctttcaatcgacccacaatcaaacagccatatattagagtagtataagtgacaacatctggaaaaattctcttaa 24934152  T
Q  318 caaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaa 417  Q
    ||| |||||||||| |||||||| | |||| | | ||| ||||||| ||  ||| || ||||||||  ||||||||||| ||  ||||| ||||||||||    
T  24934151 caatcatttcagaacataaatcagaggcatgaattacaagtttatccttgcacaaactatcaataattgtattgtacatgactacattaggctgaaccaa 24934052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 29099025 - 29098951
Alignment:
Q  15 caaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| ||||||    
T  29099025 caaacacagttttaccttctttcatctttccgtccttacaaaatgcattaaccaatatattaaaagtatacacat 29098951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 29115943 - 29115869
Alignment:
Q  15 caaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| ||||||    
T  29115943 caaacacagttttaccttctttcatctttccgtccttacaaaatgcattaaccaatatattaaaagtatacacat 29115869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 109 - 405
Target Start/End: Original strand, 16702324 - 16702620
Alignment:
Q  109 catcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttt 208  Q
    |||||||| ||||| ||||||||||| |||||| | | |||| ||||||||||   ||||||| ||||||||||| ||||| ||||  || |||||||||    
T  16702324 catcatcacagctatcacatttttagcttctttgatctttccgtccttacaaagagcatcaaccaatatattaaaagtataaacatttgggttgatgttt 16702423  T
Q  209 tccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaa 308  Q
    | ||||| ||||| ||  |||| |  ||  || ||||||| || |||||||||| |||| | |   |||| || | || |||| |||||   ||||| ||    
T  16702424 ttcaataccatttcatggaacaaactaaacgcttctttcaattgaccaacaatgcaaaatcaatagattagagaactgaaagtgacaacggtgggaggaa 16702523  T
Q  309 ttctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcatt 405  Q
    |||||||| ||| |||||| ||||||||| || | |||||| | ||  ||||||||||| ||| ||||||||| || ||| | ||||||||| ||||    
T  16702524 ttctctttacaatcatttctgaatataaaccataggcatcaattactagtttatctttacacaaaccatcaatgactgtactatacattaccacatt 16702620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 201 - 417
Target Start/End: Original strand, 21161023 - 21161239
Alignment:
Q  201 tgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatc 300  Q
    ||||||||| ||| | ||||| ||| |||| ||||||||| | ||||| || ||| |||||| |||| |||   ||||||| ||| || ||||| ||||     
T  21161023 tgatgtttttcaacaacatttcatttaacaaatcaattgcttgtttcatttgacccacaatgcaaaagccatatattaaagtattataggtaaccacatt 21161122  T
Q  301 gggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattacc 400  Q
     ||| | |||||| | ||||||||||||||||||||||||||||||||| | ||| ||||||| ||  | | || || |||||  ||| ||||||| |||    
T  21161123 aggaaatattctcatggcaaccatttcagaatataaatcaaaagcatcaattacaagtttatccttgcataaactataaataattgtactgtacatgacc 21161222  T
Q  401 gcattaagctgaaccaa 417  Q
     ||||| ||||||||||    
T  21161223 acattaggctgaaccaa 21161239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 281 - 383
Target Start/End: Complemental strand, 29876346 - 29876244
Alignment:
Q  281 gcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaa 380  Q
    ||||| ||||||| |||||| ||||||| |||||| ||||||||||||| ||| |||||||| ||||||| |||| | ||||||||| ||| ||||| ||    
T  29876346 gcattataagtaaaaacatccggagaaactctcttagcaaccatttcagtatacaaatcaaacgcatcatcaacaagcttatctttacacaaaccattaa 29876247  T
Q  381 taa 383  Q
    |||    
T  29876246 taa 29876244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 494 - 588
Target Start/End: Complemental strand, 34785725 - 34785631
Alignment:
Q  494 ccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    ||||||||||| ||||| |||  |||||||||  ||||||||||||||||||||| |||||||||||  ||  |||| |||||||||||||||||    
T  34785725 ccataactaacatggttaaaacaaaatccaagtgctaccagcttgtcatgaaagtgcaatgcttgatcaatacgacccttgagacagagaccctt 34785631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 29366742 - 29366813
Alignment:
Q  19 cacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacatt 90  Q
    |||| ||||| ||||||||| | |||| |||||||||||||||||||||||| | ||||||||| |||||||    
T  29366742 cacatttttagcttctttcaaccttctttccttacaaaatccatcaaccaatatgttaaaagtatacacatt 29366813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 340
Target Start/End: Complemental strand, 30154154 - 30153962
Alignment:
Q  148 tccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttc 247  Q
    |||||||||||| || |||||||| |||||||| |||||||||||||  || ||| ||||||  | |||||||| ||| |||| | ||| ||| ||||      
T  30154154 tccttccttacataaaccatcaaccaatatattgaaggtatacacattggggttggtgtttttgagtatcatttcattgaacaaaccaactgcttcttcg 30154055  T
Q  248 agtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatca 340  Q
    | || ||| |||||| |||| |||   ||||||  |||| |||| || ||||  ||| ||||| ||||  ||| |||||||||||||||||||    
T  30154054 aattgacccacaatgcaaaatccatagattaaactattgaaagtgacgacattaggataaattttcttaacaatcatttcagaatataaatca 30153962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 15715472 - 15715551
Alignment:
Q  288 aagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatcttta 367  Q
    |||| |||||||  |||||||||||||||| || ||||||||||||||| ||| | |||||||| |||| ||||| ||||    
T  15715472 aagttacaacattaggagaaattctctttgtaatcatttcagaatataactcataggcatcatttacatctttattttta 15715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 24272617 - 24272664
Alignment:
Q  541 atgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||    
T  24272617 atgaaagtgcaatgcttgatgtatctgacctttgagacagtgaccctt 24272664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 29834901 - 29834834
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaa 78  Q
    ||||| |||||| ||||| |||||||||| ||||  |||||||||||| ||||||||||| |||||||    
T  29834901 atagctaacacatttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaa 29834834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 29866335 - 29866268
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaa 78  Q
    ||||| |||||| ||||| |||||||||| ||||  |||||||||||| ||||||||||| |||||||    
T  29866335 atagctaacacatttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaa 29866268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29882121 - 29882042
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacatt 90  Q
    ||||| |||||| ||||| ||||||||| | |||  |||||||||||||||||||||||| || |||| ||| |||||||    
T  29882121 atagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacatt 29882042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29902942 - 29902863
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacatt 90  Q
    ||||| |||||| ||||| ||||||||| | |||  ||||||||||| |||||||||||| || |||||||| |||||||    
T  29902942 atagctaacacatttttagcttctttcacccttccttccttacaaaaaccatcaaccaatatagtaaaagtatacacatt 29902863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29909277 - 29909198
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacatt 90  Q
    ||||| |||||| ||||| ||||||||| | |||  |||||||||||||||||||||||| || |||| ||| |||||||    
T  29909277 atagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacatt 29909198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 24264065 - 24264143
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    ||||| ||| || ||||| ||||||||| | |||  |||||||||||| ||||||||||| ||||||||||| ||||||    
T  24264065 atagctaacccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacat 24264143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 24272260 - 24272338
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    ||||| ||| || ||||| ||||||||| | |||  |||||||||||| ||||||||||| ||||||||||| ||||||    
T  24272260 atagctaacccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacat 24272338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 417
Target Start/End: Complemental strand, 24941715 - 24941585
Alignment:
Q  287 taagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacgg 386  Q
    ||||| |||||||| ||| ||||||||||  ||| |||||||||| |||||||| | |||| | | ||| ||||||| ||  ||| || ||||||||  |    
T  24941715 taagtgacaacatctggaaaaattctcttaacaatcatttcagaacataaatcagaggcatgaattacaagtttatccttgcacaaactatcaataattg 24941616  T
Q  387 tattgtacattaccgcattaagctgaaccaa 417  Q
    |||||||||| ||  ||||| ||||||||||    
T  24941615 tattgtacatgactacattaggctgaaccaa 24941585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 29348911 - 29348989
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    ||||| |||||| ||||| ||||||||| | |||  |||||||||||||||||||||||| || |||| ||| ||||||    
T  29348911 atagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacat 29348989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 16702339 - 16702402
Alignment:
Q  19 cacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagta 82  Q
    |||| ||||| ||||||| ||||||| |||||||||||   ||||||||||| |||||||||||    
T  16702339 cacatttttagcttctttgatctttccgtccttacaaagagcatcaaccaatatattaaaagta 16702402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29889206 - 29889127
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacatt 90  Q
    ||||| |||||| ||||| ||||||||| | |||  |||||||||||||||||||||| | | ||||| ||| |||||||    
T  29889206 atagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccattatgttaaaggtatacacatt 29889127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 29928959 - 29928900
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaat 70  Q
    ||||| |||||| ||||| ||||||||| | |||  ||||||||||||||||||||||||    
T  29928959 atagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaat 29928900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 29358292 - 29358370
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    ||||| |||||| ||||| ||||||||| | |||  |||||||||||||||||||| ||| || |||| ||| ||||||    
T  29358292 atagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaactaatatagtaaaggtatacacat 29358370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 29886947 - 29886906
Alignment:
Q  47 tccttacaaaatccatcaaccaatgtattaaaagtagacaca 88  Q
    |||||||||||| ||||||||||| ||||||||||| |||||    
T  29886947 tccttacaaaatgcatcaaccaatatattaaaagtatacaca 29886906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 25450573 - 25450517
Alignment:
Q  32 tctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacaca 88  Q
    ||||||| |||||  |||||||||||||||||||||||| |||| || ||| |||||    
T  25450573 tctttcacctttccttccttacaaaatccatcaaccaatatattgaaggtatacaca 25450517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 349
Target Start/End: Original strand, 29954103 - 29954167
Alignment:
Q  285 tgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatca 349  Q
    ||||||| |||||||  ||||||||| ||||  ||| ||||||||||||||||||| | ||||||    
T  29954103 tgtaagtgacaacattaggagaaattttcttgacaatcatttcagaatataaatcatacgcatca 29954167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 30028786 - 30028710
Alignment:
Q  154 cttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaaca 230  Q
    |||||| || |||||||  ||||||||||| ||||| |||||||| |  ||||||| ||| ||||||| ||||||||    
T  30028786 cttacacaacccatcaatcaatatattaaaagtataaacatccgggtcaatgtttttcaacatcatttcattaaaca 30028710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 367
Target Start/End: Original strand, 30578168 - 30578332
Alignment:
Q  203 atgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgg 302  Q
    ||||||| |||| |||||| |||||||| |  ||| ||||||| || || ||| |||||  |||| |||   |||| || ||| || || |||||||| |    
T  30578168 atgtttttcaatctcatttcattaaacaaacgaatagcatcttccaattgacccacaatacaaaaaccatatattagagtattatacgtgacaacatcag 30578267  T
Q  303 gagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatcttta 367  Q
    || ||||||||||  ||||||| ||| ||||||||||| | ||||||   ||| |||||||||||    
T  30578268 gaaaaattctcttgacaaccatctcacaatataaatcatacgcatcaactacaagtttatcttta 30578332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 259; Significance: 1e-144; HSPs: 3)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 86 - 592
Target Start/End: Complemental strand, 22059 - 21553
Alignment:
Q  86 acattaggtttaatgtcttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaagg 185  Q
    |||| ||||||||||  |||| |||||||||||||||||||||||||||  ||||| |   |||| |||||||||||||||||||| |||||| ||||||    
T  22059 acatcaggtttaatgctttgtttcatcatcatagctaacacatttttagcctcttttatgtttccgtccttacaaaatccatcaaccaatatactaaagg 21960  T
Q  186 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcatt 285  Q
    |||||||||| ||  ||||||||| | || |||||||||| || | ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  21959 tatacacatctgggatgatgtttttcgatgtcattttattgaataaatcaattgcatctttcaatttaccaacaatgcaaaagccactaattaaagcatt 21860  T
Q  286 gtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacg 385  Q
    |||||| | |||||||||  |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    
T  21859 gtaagtgaaaacatcggggaaaattctcttagaaaccttttcagaatataaatcaaaagcatcattaacatgtttatctttacacataccatcgataatg 21760  T
Q  386 gtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaa 485  Q
    ||||||||||||||| ||| | ||||||| ||||||||||||   ||||  |||||||  || ||| || ||||||||||||||||||||||||||||||    
T  21759 gtattgtacattaccacatcaggctgaactaattttccatcatttcgtcggagcaattcaagggctgcttttgtttcaccaactttacacaagccattaa 21660  T
Q  486 tcaagattccataactaacttggttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacc 585  Q
    ||||| ||||||||||||||||||  ||||||||||| | | | |  | ||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  21659 tcaaggttccataactaacttggtccaaatgaaatcccatcgcaataaccttatcatgaaagtgcaatgcttgatggatctgacctttgagacagaaacc 21560  T
Q  586 cttaatg 592  Q
    |||||||    
T  21559 cttaatg 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 22029 - 21951
Alignment:
Q  11 atagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacat 89  Q
    ||||| |||||| ||||| | ||||| || |||| ||||||||||||||||||||||||| || |||| ||| ||||||    
T  22029 atagctaacacatttttagcctcttttatgtttccgtccttacaaaatccatcaaccaatatactaaaggtatacacat 21951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 539 - 588
Target Start/End: Complemental strand, 389 - 340
Alignment:
Q  539 tcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    |||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  389 tcatgaaagtgcaatgcttgatggatgtcacctttgagacaaagaccctt 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 108 - 588
Target Start/End: Original strand, 15063181 - 15063661
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||||||||||||||| |||| ||| | |||||||||||||||| |||||||  |||||| |||| |||||||||| ||| || |||||    
T  15063181 tcatcatcacagctaacacatttttagcttctctcacctttccttccttacaaaaaccatcaatcaatatactaaaagtatacacattcggattaatgtt 15063280  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
     ||| |||||||| ||||||||| |||||  |||| ||||| ||||||||||| | |||| ||||||||||||| | | ||||| || ||||| ||||||    
T  15063281 gtccgatatcattctattaaacaaatcaacagcatatttcaatttaccaacaacgcaaaagccactaattaaagaactataagtgactacatcaggagaa 15063380  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaa 407  Q
    ||||| || | |||||||||| ||||||||||||||||||| |||||| ||||||| ||| |||||| ||||||||  ||  | ||||||||| |||||     
T  15063381 attcttttagaaaccatttcacaatataaatcaaaagcatcgttaacaagtttatccttacacatactatcaataatcgtgctatacattaccacattag 15063480  T
Q  408 gctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttg 507  Q
    || ||||||||||||||||||| ||||||| |||||| | |||| || ||||||| |||||| |||| || ||||| |||||  | ||||||||||||||    
T  15063481 gccgaaccaattttccatcaacccgtctcaacaattgtacagctgcttttgtttcgccaactctacataacccattgatcaacgtcccataactaacttg 15063580  T
Q  508 gttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
     |  || ||||| ||  || |||||| ||| || ||||||| |||||||| ||| | ||  ||||| ||||| ||||||||    
T  15063581 atccaactgaaacccctgcgctaccaccttatcgtgaaagtacaatgctttatgaacctcgcctttaagacaaagaccctt 15063661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 15063195 - 15063279
Alignment:
Q  17 aacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacattaggtttaatgt 101  Q
    |||||| ||||| ||||| ||| |||||  ||||||||||| ||||||| |||| || |||||||| ||||||| || |||||||    
T  15063195 aacacatttttagcttctctcacctttccttccttacaaaaaccatcaatcaatatactaaaagtatacacattcggattaatgt 15063279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 4e-83; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 108 - 588
Target Start/End: Original strand, 24219540 - 24220020
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| | | ||||||||||||| ||||||||   ||||||||||||||||| ||||||| |||||| ||||||||||||||   || ||||||||    
T  24219540 tcatcatcacaacaaacacatttttagcttctttcacttttccttccttacaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgtt 24219639  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    |||||||||||||||||  |||| | ||||||||||||||| || ||| | |||| | || |||| |||||||| ||| ||||| ||||||   ||| ||    
T  24219640 ttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaa 24219739  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaa 407  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||||||  ||| |||||||||||  || |||||||| ||| ||| ||    
T  24219740 attctcttagcaaccatttcagaatagaaatcaaaagcatcgttaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaa 24219839  T
Q  408 gctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttg 507  Q
    |  |||||||||| |||||||  |||||||||| ||  |  ||  || ||||||  ||||||||||| || || || |||||| | |  |||||||||||    
T  24219840 gtcgaaccaatttcccatcaattcgtctcagcatttctaaggcagcttttgtttgtccaactttacataacccgttgatcaaggtcctgtaactaacttg 24219939  T
Q  508 gttgaaatgaaatccaagcactaccagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagaccctt 588  Q
    ||| || |||||||||||  ||| || ||| |||||||||| |||||||| |||||| | |||||||||||| ||||||||    
T  24219940 gttcaactgaaatccaagtgctaacaccttatcatgaaagtgcaatgctttatggatgtcacctttgagacaaagaccctt 24220020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 108 - 381
Target Start/End: Complemental strand, 16350744 - 16350471
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| ||||||||||| |||||| | | |||||||||||||||   ||||||| ||||||||||| |||||  |||| || ||||||||    
T  16350744 tcatcatcacagctatcacatttttagcttctttgatctttccttccttacaaagagcatcaaccaatatattaaaagtataagcatctgggttgatgtt 16350645  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || || || ||||| |||||||| |  || ||||||||| | ||||||||||||  |||| |||   |||| || | || |||| ||||||  ||||| |    
T  16350644 tttcattaccatttcattaaacaaacgaaatgcatctttgaatttaccaacaatacaaaatccatagattagagaactgaaagtgacaacagtgggagga 16350545  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaat 381  Q
    ||||||||| ||| |||||| ||||||||| || | |||||| | ||  ||||||||||| ||| |||||||||    
T  16350544 attctctttacaatcatttctgaatataaaccataggcatcagttactagtttatctttacacaaaccatcaat 16350471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 525
Target Start/End: Complemental strand, 11990967 - 11990589
Alignment:
Q  147 ttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatcttt 246  Q
    |||||||||||||||   ||||||| ||||||||||| |||||   ||| || |||||||||| ||||| ||||| |  ||||| | ||| ||| ||||     
T  11990967 ttccttccttacaaagagcatcaaccaatatattaaaagtataataatcagggttgatgtttttcaataccatttcacgaaacaaaccaaatgcttcttc 11990868  T
Q  247 cagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagca 346  Q
    ||||| |||||||||| |||| |||  ||||| |||| |  |||| |||||||||||||||||| | ||||||| ||||| ||||||||| ||| | |||    
T  11990867 cagttgaccaacaatgcaaaatccataaattagagcactaaaagtgacaacatcgggagaaattttttttgcaatcatttgagaatataactcataggca 11990768  T
Q  347 tcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagcaattgca 446  Q
    ||| | ||   ||||| |||| ||| || |||||| |  || || ||||||||| |||| | ||  |||||||| |||||||    |||||||| |||||    
T  11990767 tcaattaccaatttatgtttacacaaactatcaatgattgtgttatacattaccacattgatcttgaccaatttcccatcaatctttctcagcatttgca 11990668  T
Q  447 gagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatccaag 525  Q
      |||  ||||||||| || | ||||||||||||||| |||||| | ||||| |||| ||| |  || |||||||||||    
T  11990667 aggctgttcttgtttcccctattttacacaagccattgatcaaggtcccatagctaaattgatccaagtgaaatccaag 11990589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24219552 - 24219625
Alignment:
Q  15 caaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacaca 88  Q
    |||||||| ||||| |||||||||  ||||  |||||||||||| ||||||||||| || |||| ||| |||||    
T  24219552 caaacacatttttagcttctttcacttttccttccttacaaaatgcatcaaccaatatactaaaggtatacaca 24219625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 24226192 - 24226108
Alignment:
Q  283 attgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatcttta 367  Q
    ||||||||| || ||||| ||| ||||| ||||  ||| ||||||||||||||||||| |  ||||| ||||| | |||||||||    
T  24226192 attgtaagtgacgacatcaggataaattttcttatcaatcatttcagaatataaatcacacccatcactaacaagcttatcttta 24226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 6e-82; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 130 - 592
Target Start/End: Complemental strand, 10129809 - 10129347
Alignment:
Q  130 tttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaac 229  Q
    ||||| ||||||| |  |||| |||||||||||  ||||||| |||||| | | |||||| ||||  || || ||||||||||||||||||||||  |||    
T  10129809 tttagcttctttcggttttccatccttacaaaaagcatcaaccaatatactcatggtataaacatttgggttaatgttttccaatatcattttatgcaac 10129710  T
Q  230 agatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcag 329  Q
    | | ||||||||||||||| || ||| |||| | |||| ||||||||||||  ||| ||||| |||||||| ||| |||||||||| || | ||||||||    
T  10129709 aaaccaattgcatctttcaattgacccacaacgcaaaagccactaattaaattattataagtgacaacatcaggaaaaattctcttagcgatcatttcag 10129610  T
Q  330 aatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaac 429  Q
    ||||||||| |||||||||||||||| ||||||||||  ||||||||||||| |   |  | ||||||||| ||||| ||||||| | ||| ||||||||    
T  10129609 aatataaattaaaagcatcattaacaagtttatctttgcacataccatcaatgatcatggtatacattaccacattaggctgaacaattttcccatcaac 10129510  T
Q  430 acgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatccaagcact 529  Q
     ||||||||||||| ||| ||  |||||||||| |||||||||||||| ||||||||||||  |||||||||||| || || || ||||||||  |  ||    
T  10129509 tcgtctcagcaattccagggcagctcttgtttctccaactttacacaatccattaatcaaggctccataactaacctgattcaactgaaatccctgtgct 10129410  T
Q  530 accagcttgtcatgaaagttcaatgcttgatggatctgacctttgagacagagacccttaatg 592  Q
    |||| |||||||||||||| |||||||| | | | ||  ||||| ||||||||||||||||||    
T  10129409 accaccttgtcatgaaagtgcaatgcttcacgaacctcgcctttaagacagagacccttaatg 10129347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 124 - 400
Target Start/End: Original strand, 4260638 - 4260914
Alignment:
Q  124 cacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcatttta 223  Q
    ||||||||||| |||||  | | ||||||||||||||||  |||| || |||  |||||| |||||||||| ||| || ||||||||| ||||||||||     
T  4260638 cacatttttagcttcttctatctttccttccttacaaaaggcatctaccaatccattaaaagtatacacattcgggttaatgttttccgatatcattttt 4260737  T
Q  224 ttaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaacca 323  Q
    ||||||| | | |  || |||| || ||||||||||| | |||| |||  |||||||||| | ||||| |||||||  ||||||||||   | |||||||    
T  4260738 ttaaacaaacccaacgcttcttccaatttaccaacaacgcaaaaaccatcaattaaagcagtataagtgacaacattaggagaaattccgctagcaacca 4260837  T
Q  324 tttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattacc 400  Q
    ||||| ||||||||||||||||||||||||||  | |||||||  |||||   |||||||| ||| |||||||||||    
T  4260838 tttcataatataaatcaaaagcatcattaacaaatgtatctttgcacatattgtcaataaccgtagtgtacattacc 4260914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 124 - 400
Target Start/End: Original strand, 4264260 - 4264536
Alignment:
Q  124 cacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcatttta 223  Q
    ||||||||||| |||||  | | ||||||||||||||||  |||| || |||  |||||| |||||||||| ||| || ||||||||| ||||||||||     
T  4264260 cacatttttagcttcttctatctttccttccttacaaaaggcatctaccaatccattaaaagtatacacattcgggttaatgttttccgatatcattttt 4264359  T
Q  224 ttaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaacca 323  Q
    ||||||| | | |  || |||| || ||||||||||| | |||| |||  |||||||||| | ||||| |||||||  ||||||||||   | |||||||    
T  4264360 ttaaacaaacccaacgcttcttccaatttaccaacaacgcaaaaaccatcaattaaagcagtataagtgacaacattaggagaaattccgctagcaacca 4264459  T
Q  324 tttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattacc 400  Q
    ||||| ||||||||||||||||||||||||||  | |||||||  |||||   |||||||| ||| |||||||||||    
T  4264460 tttcataatataaatcaaaagcatcattaacaaatgtatctttgcacatattgtcaataaccgtagtgtacattacc 4264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 108 - 381
Target Start/End: Complemental strand, 41315963 - 41315690
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||||||||| |||| |||||| |||||||| | ||||||||||||| |  |||||||| || ||  |||| ||||||||   ||| || |||||    
T  41315963 tcatcatcatagctatcacacttttagcttctttcatctttccttccttacatagaccatcaaccaaaatggtaaaagtatacacgctcgggttaatgtt 41315864  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| | | |||| | ||| ||||||||||| || ||||| |||| |||| |||   |||| || |||| ||||  ||||||| ||||||    
T  41315863 tttcaataccatttgactgaacaaaccaaatgcatctttcaattgaccaataatgcaaaatccatatattagagaattgaaagtggcaacatcaggagaa 41315764  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaat 381  Q
    ||| ||| ||||| ||||||||||||||| ||| |||||||||| ||| | ||||||||| ||| |||||||||    
T  41315763 attttctctgcaatcatttcagaatataactcataagcatcatttacaagcttatctttacacaaaccatcaat 41315690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 165 - 367
Target Start/End: Complemental strand, 19489887 - 19489685
Alignment:
Q  165 catcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaa 264  Q
    ||||||| ||| ||||||| ||||| |||||||| |||||||||| ||||| ||||| ||| ||||   |||   | ||||||| || ||| || ||  |    
T  19489887 catcaaccaatgtattaaatgtataaacatccggattgatgtttttcaataccatttcatttaacaatacaaacacttctttcaattgaccgacgataca 19489788  T
Q  265 aaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatct 364  Q
    |||||||   |||| |  | ||||||| | |||||| |||||||| | |||   || |||||||||||||||||||||||||||||| ||||||||||||    
T  19489787 aaacccatgtattagactagtgtaagtgaaaacatcaggagaaatccgcttacgaatcatttcagaatataaatcaaaagcatcatttacatgtttatct 19489688  T
Q  365 tta 367  Q
    |||    
T  19489687 tta 19489685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 399
Target Start/End: Complemental strand, 17250830 - 17250716
Alignment:
Q  285 tgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataac 384  Q
    |||||||||||||||  ||| |||  |||||  ||| ||||||| ||||||||||||| |||||  | ||| ||||||||||| | | |||||||||||     
T  17250830 tgtaagtaacaacattaggaaaaaccctcttctcaaacatttcacaatataaatcaaacgcatccctcacaagtttatctttacataaaccatcaataat 17250731  T
Q  385 ggtattgtacattac 399  Q
     ||||| ||||||||    
T  17250730 agtattatacattac 17250716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 17250980 - 17250917
Alignment:
Q  30 cttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaaagtagacacattagg 93  Q
    ||||| |||||||||  |||||||| || |||||||||||||||||||| ||| | ||||||||    
T  17250980 cttctctcatctttccttccttacataaaccatcaaccaatgtattaaacgtacaaacattagg 17250917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 108 - 336
Target Start/End: Original strand, 1525 - 1753
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||||||||| ||||||||||| |||||||    ||||||||||||||||  |||| || ||||||||||| ||||||||||| || ||||||||    
T  1525 tcatcatcatagctatcacatttttagcttctttcgtgtttccttccttacaaaaagcatcgaccaatatattaaaagtatacacatcagggttgatgtt 1624  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| |||||  | ||||| | ||| ||| |||||||||| |||||||||| |||| |||  ||| | |||| |  |||| |||||||||||||||    
T  1625 tttcaataccatttcgtgaaacaaaccaaatgcttctttcagttgaccaacaatgcaaaatccataaatcagagcactaaaagtgacaacatcgggagaa 1724  T
Q  308 attctctttgcaaccatttcagaatataa 336  Q
    |||||||||| || |||||||||||||||    
T  1725 attctctttgtaatcatttcagaatataa 1753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 70; Significance: 3e-31; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 110 - 383
Target Start/End: Complemental strand, 137066 - 136793
Alignment:
Q  110 atcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtttt 209  Q
    ||||||||||| ||| |||| |||| | ||||||   |||||||||| ||||   ||||||| ||||||||||| |||||  |||  || ||||||||||    
T  137066 atcatcatagccaacgcattcttagctcctttcacatttccttccttgcaaagagcatcaaccaatatattaaaagtataatcatttgggttgatgtttt 136967  T
Q  210 ccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaat 309  Q
     ||||| ||||| ||  |||| | ||| ||| ||||||| |  |||||||||| |||| |||   |||| || |||| |||| |||||||| ||||||||    
T  136966 tcaataccatttgatggaacaaaccaaatgcttctttcaatcgaccaacaatgcaaaatccatagattagagaattgaaagtgacaacatcaggagaaat 136867  T
Q  310 tctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataa 383  Q
    | ||||||||| ||||||||||||||| ||| |||||||| | ||| ||||||||||| ||| || ||||||||    
T  136866 tgtctttgcaatcatttcagaatataactcataagcatcaattacaagtttatctttacacaaactatcaataa 136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 405
Target Start/End: Original strand, 105083 - 105340
Alignment:
Q  148 tccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttc 247  Q
    ||||||||||||||   ||||||| ||||||||||| ||||||||||| || |||||||||| ||||| ||||| ||  | || | ||| ||| ||||||    
T  105083 tccttccttacaaagagcatcaaccaatatattaaaagtatacacatctgggttgatgtttttcaataccatttgatggaccaaaccaaatgcttctttc 105182  T
Q  248 agtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcat 347  Q
    | || |||||||||| ||||||||  ||||| |||| |  |||| ||||||   ||||||||| |||||| || ||||||||| ||||| ||| | ||||    
T  105183 aattgaccaacaatgcaaaacccataaattagagcactaaaagtgacaacagtaggagaaattttctttgtaatcatttcagagtataactcatatgcat 105282  T
Q  348 cattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcatt 405  Q
    || | ||| ||||||||||  ||| || |||||| || || || ||||||||| ||||    
T  105283 cacttacaagtttatctttgcacaaactatcaatgactgtgttatacattaccacatt 105340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 336
Target Start/End: Complemental strand, 139952 - 139764
Alignment:
Q  148 tccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttc 247  Q
    |||||| |||||||   ||||||| ||||||||||| ||||| |||||  | |||||||||| ||||| ||||| ||  |||| |  || |||||||||     
T  139952 tccttctttacaaagagcatcaaccaatatattaaaagtataaacatctcggttgatgtttttcaataccatttcatggaacaaacgaaatgcatctttg 139853  T
Q  248 agtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataa 336  Q
    | || |||||||||  |||| |||   |||| || | || |||| |||||||| ||| ||||| ||||||||| |||||||||||||||    
T  139852 aattgaccaacaatacaaaatccatagattagagaactgaaagtgacaacatcaggataaattttctttgcaatcatttcagaatataa 139764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 345
Target Start/End: Original strand, 121776 - 122013
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| ||||||||||| |||||| | | |||||||||| ||||   ||||||  |||||  |||| ||||| | ||  || ||||||||    
T  121776 tcatcatcacagctatcacatttttagcttctttgatctttccttccttgcaaagagcatcaatcaatatggtaaaagtataaatatttgggttgatgtt 121875  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| ||  |||| | ||| ||| ||||||| || |||||||||| |||| |||   |||| ||   |  ||||||||||||  ||||||    
T  121876 tttcaatagcatttcatggaacaaaccaaatgcttctttcaattgaccaacaatgcaaaatccatagattagagagctcaaagtaacaacattaggagaa 121975  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagc 345  Q
    ||| |||||  || ||||| ||||||||| ||| ||||    
T  121976 attttctttagaatcatttgagaatataactcataagc 122013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 525
Target Start/End: Complemental strand, 136723 - 136651
Alignment:
Q  453 ctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggttgaaatgaaatccaag 525  Q
    |||||||||| || | ||||||||| ||||| |||||| |  ||||| |||||||||| || |||||||||||    
T  136723 ctcttgtttctcccattttacacaatccattgatcaaggtcgcataagtaacttggttcaattgaaatccaag 136651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 102 - 520
Target Start/End: Original strand, 43586 - 44004
Alignment:
Q  102 cttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggttt 201  Q
    ||||| |||||||||| ||||||| ||| |||| | ||||||   |||||||||||||||   ||||||| ||||||||||| ||||||||||  || ||    
T  43586 cttgtttcatcatcatggctaacagattcttagctcctttcacatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggtt 43685  T
Q  202 gatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcg 301  Q
    |||||||| ||||| ||||| ||  |||| | ||| ||| ||| ||| || |||||||| | |||| |||   ||||||| |||| |||| ||||||||     
T  43686 gatgtttttcaataccatttcatggaacaaaccaaatgcttctatcaattgaccaacaaagcaaaatccatagattaaagaattgaaagtgacaacatca 43785  T
Q  302 ggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccg 401  Q
    ||||||||| ||||| ||| ||||| ||||||||| ||| |||| ||  | ||   ||| |||||| ||| || ||||||||  || |||| ||||| |     
T  43786 ggagaaattttctttacaatcatttgagaatataactcataagcctcggtcaccaatttctctttacacaaactatcaataattgtgttgtgcattaaca 43885  T
Q  402 cattaagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataact 501  Q
    ||||||  | ||||||||| |||||||    ||| |  ||||| |  |||||| ||||||  || | ||||||||||||||| ||||| ||  ||||| |    
T  43886 cattaatgttaaccaatttcccatcaatctttcttaaaaattgtaaggcttctgttgttttccccattttacacaagccattgatcaatatagcataagt 43985  T
Q  502 aacttggttgaaatgaaat 520  Q
    ||||||||| || ||||||    
T  43986 aacttggttcaagtgaaat 44004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 108 - 345
Target Start/End: Complemental strand, 5890 - 5653
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    |||||||||  ||||||| ||| |||| | |||||||  |||||||||||||||   ||||||| ||||||||||| ||||||||||  || ||||||||    
T  5890 tcatcatcacggctaacagattcttagctcctttcagatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatgtt 5791  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| ||  |||| | ||| ||| ||| ||| || |||||||||| |||| |||   ||||||| |||| |||| |||||||| ||||||    
T  5790 tttcaataccatttcatggaacaaaccaaatgcttctatcaattgaccaacaatgcaaaatccatagattaaagaattgaaagtgacaacatcaggagaa 5691  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagc 345  Q
    ||| ||||| ||| ||||| ||||||||| ||| ||||    
T  5690 attttctttacaatcatttgagaatataactcataagc 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 336
Target Start/End: Original strand, 126428 - 126656
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| |||| |||||| |||||||| | ||||||||||||| |   ||||||| | ||||||||| ||||| ||||| || ||||||||    
T  126428 tcatcatcacagctatcacacttttagcttctttcatctttccttccttacatagagcatcaaccattatattaaaagtataaacatctgggttgatgtt 126527  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || |||||  |||| ||  |||| |  ||  |||||||| | || |||||||||  |||| |||  ||||| || |||| |||| ||||||| |||||||    
T  126528 tttcaatactatttcatggaacaaacgaaacgcatctttgaattgaccaacaatacaaaatccataaattagagaattgaaagtgacaacattgggagaa 126627  T
Q  308 attctctttgcaaccatttcagaatataa 336  Q
    |||||||||| || |||||||||||||||    
T  126628 attctctttgtaatcatttcagaatataa 126656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 126753 - 126829
Alignment:
Q  433 tctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggt 509  Q
    ||||| || |||||  ||| |||||||||| || | ||||||||||||||| |||||| | ||||| ||||||||||    
T  126753 tctcaacatttgcaaggctgctcttgtttcccctattttacacaagccattgatcaaggtcccatagctaacttggt 126829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 102 - 336
Target Start/End: Complemental strand, 8695 - 8461
Alignment:
Q  102 cttgtatcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggttt 201  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||   ||||||||||||| |   ||||||| ||||||||||| ||||| ||||  || ||    
T  8695 cttgtttcaccatcatagctaacacatttttagcttctttcatttttccttccttacagagagcatcaaccaatatattaaaagtataaacatttgggtt 8596  T
Q  202 gatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcg 301  Q
    |||||||| ||||| ||||| ||| |||| |  || ||||||||| | || |||||||||  |||| |||   |||| || | || |||| ||||||       
T  8595 gatgtttttcaataccatttcattgaacaaacgaaatgcatctttgaattgaccaacaatacaaaatccatagattagagaactgaaagtgacaacagta 8496  T
Q  302 ggagaaattctctttgcaaccatttcagaatataa 336  Q
    ||||||||| |||||| || |||||||||||||||    
T  8495 ggagaaattgtctttgtaatcatttcagaatataa 8461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 509
Target Start/End: Complemental strand, 8344 - 8288
Alignment:
Q  453 ctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttggt 509  Q
    |||||||||| || | ||||||||||||||| |||||| | ||||| ||||||||||    
T  8344 ctcttgtttcccctattttacacaagccattgatcaaggtcccatagctaacttggt 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 108 - 525
Target Start/End: Complemental strand, 2925 - 2508
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| | || |||||| |||||| | | ||||||||||||| |   | ||||| ||||| ||||| ||||||||||| || ||||||||    
T  2925 tcatcatcacagctatcccacttttagcttctttgatctttccttccttacatagagcgtcaaccaatatgttaaaagtatacacatctgggttgatgtt 2826  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| |   | || | ||| ||| ||||| | || |||||||||| || | |||   |||| || ||||  ||| ||||||   ||||||    
T  2825 tttcaataccatttcacggagcaaaccaaatgcttctttgaattgaccaacaatgcaatatccatagattagagaattgagagtgacaacagtaggagaa 2726  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcat--- 404  Q
    |||||||||| || ||||||||||||||| ||| | |||||||| ||| ||||||||||  ||| ||||||||| |  ||| | ||||||||  |||       
T  2725 attctctttgtaatcatttcagaatataactcatatgcatcatttacaagtttatctttgcacaaaccatcaatgattgtactatacattacaacatcgg 2626  T
Q  405 taagctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaac 504  Q
    ||  |||| ||||||| || || |   |||||| || |||||  ||  |||||||||| || | ||||||||||||||| |||||| | || || |||||    
T  2625 ta--ctga-ccaatttcccttcgatctgtctcaacatttgcaacgccgctcttgtttcccctattttacacaagccattgatcaaggtcccgtagctaac 2529  T
Q  505 ttggttgaaatgaaatccaag 525  Q
    |||||||||||||||||||||    
T  2528 ttggttgaaatgaaatccaag 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1840 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold1840
Description:

Target: scaffold1840; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 108 - 525
Target Start/End: Complemental strand, 1103 - 686
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| | || |||||| |||||| | | ||||||||||||| |   | ||||| ||||| ||||| ||||||||||| || ||||||||    
T  1103 tcatcatcacagctatcccacttttagcttctttgatctttccttccttacatagagcgtcaaccaatatgttaaaagtatacacatctgggttgatgtt 1004  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| |   | || | ||| ||| ||||| | || |||||||||| || | |||   |||| || ||||  ||| ||||||   ||||||    
T  1003 tttcaataccatttcacggagcaaaccaaatgcttctttgaattgaccaacaatgcaatatccatagattagagaattgagagtgacaacagtaggagaa 904  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcatt-a 406  Q
    |||||||||| || ||||||||||||||| ||| | |||||||| ||| ||||||||||  ||| ||||||||| |  ||| | ||||||||  ||||      
T  903 attctctttgtaatcatttcagaatataactcatatgcatcatttacaagtttatctttgcacaaaccatcaatgattgtactatacattacaacattgg 804  T
Q  407 agctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaactt 506  Q
      ||| |||||||| || || |   |||||| || |||||  ||  |||||||||| || | ||||||||| ||||| |||||| | || || |||||||    
T  803 ttctg-accaatttcccttcgatctgtctcaacatttgcaacgccgctcttgtttcccctattttacacaatccattgatcaaggtcccgtagctaactt 705  T
Q  507 ggttgaaatgaaatccaag 525  Q
    |||||||||||||||||||    
T  704 ggttgaaatgaaatccaag 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 108 - 523
Target Start/End: Complemental strand, 27048 - 26633
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| |||||||||||||||||||||||||   ||||||||||||||||   |||| || |||||||| || ||| | ||||| || ||||||||    
T  27048 tcatcatcacagctaacacatttttagtttctttcgtgcttccttccttacaaagagcatcgaccaatatattgaaagtacaaacatcagggttgatgtt 26949  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    |  ||||| ||||| ||  |||| | ||| ||| ||||| | || |||||| ||| |||| |||   |||| |||| |  |||| |||||||| ||||||    
T  26948 tgtcaataccatttcatggaacaaaccaaatgcttctttgaattgaccaaccatgcaaaatccatagattagagcactaaaagttacaacatcaggagaa 26849  T
Q  308 attctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatctttagacataccatcaataacggtattgtacattaccgcattaa 407  Q
    | | ||||| ||| ||||| ||||||||| ||| |||| ||| | ||   ||| |||||| ||| || |||||| |  ||  | ||||||||| ||||      
T  26848 actttctttacaatcatttgagaatataactcataagcctcagtcactaatttctctttacacaaactatcaatgattgtgctatacattaccacattgg 26749  T
Q  408 gctgaaccaattttccatcaacacgtctcagcaattgcagagcttctcttgtttcaccaactttacacaagccattaatcaagattccataactaacttg 507  Q
      |  |||||||| |||||||    ||||| || |||||  ||  |||||||||| || | ||||||||| ||||| |||||||| ||||| |||||||     
T  26748 tgttgaccaatttcccatcaatctttctcaacacttgcaaggcagctcttgtttctcccattttacacaatccattgatcaagatcccatagctaacttc 26649  T
Q  508 gttgaaatgaaatcca 523  Q
    ||| ||| ||||||||    
T  26648 gttcaaacgaaatcca 26633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 336
Target Start/End: Complemental strand, 3642692 - 3642503
Alignment:
Q  147 ttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatcttt 246  Q
    |||| ||||||||||   ||||||| |||||| | || ||||| ||||| || ||||| |||| ||||| ||||| ||  |||| | ||| ||| |||||    
T  3642692 ttccatccttacaaagagcatcaaccaatatactgaaagtataaacatctgggttgatatttttcaataccatttcatggaacaaaccaaatgcttcttt 3642593  T
Q  247 cagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataa 336  Q
    || || |||||||| | |||| ||    |||| || |||| |||| ||||||||||||||||||||||||| || |||||||||||||||    
T  3642592 caattgaccaacaacgcaaaatcccaagattagagaattgaaagtgacaacatcgggagaaattctctttgtaatcatttcagaatataa 3642503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 336
Target Start/End: Original strand, 31610 - 31837
Alignment:
Q  108 tcatcatcatagctaacacatttttagtttctttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt 207  Q
    ||||||||| ||||| ||||||||||| |||||| | | ||| ||||||||| |   ||||||| |||||  |||| ||||| | ||| || ||||||||    
T  31610 tcatcatcacagctatcacatttttagcttctttgatctttcattccttacatagaacatcaaccaatatgctaaaagtataaatatctgggttgatgtt 31709  T
Q  208 ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcattgtaagtaacaacatcgggagaa 307  Q
    || ||||| ||||| |   |||| | ||| ||| ||||| | || |||||||||| |||| |||   |||| || |||| |||| | || | | ||||||    
T  31710 tttcaataccatttcacggaacaaaccaaatgcttctttgaattgaccaacaatgcaaaatccatggattagagaattgaaagtta-aagagcaggagaa 31808  T
Q  308 attctctttgcaaccatttcagaatataa 336  Q
    |||||||||| || |||||||||||||||    
T  31809 attctctttgtaatcatttcagaatataa 31837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 13905083 - 13905162
Alignment:
Q  288 aagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacatgtttatcttta 367  Q
    |||| |||||||  |||||||||||||||| || ||||||||||||||| ||| | |||||||| |||| ||||| ||||    
T  13905083 aagttacaacattaggagaaattctctttgtaatcatttcagaatataactcataggcatcatttacatctttattttta 13905162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 5871 - 5928
Alignment:
Q  288 aagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagc 345  Q
    ||||||||||||| ||||||||| ||||| ||| ||||| ||||||||| ||| ||||    
T  5871 aagtaacaacatcaggagaaattttctttacaatcatttgagaatataactcataagc 5928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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