View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9008_low_7 (Length: 511)

Name: NF9008_low_7
Description: NF9008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9008_low_7
NF9008_low_7
[»] chr1 (24 HSPs)
chr1 (158-504)||(24059889-24060231)
chr1 (18-174)||(24060245-24060401)
chr1 (448-504)||(45563669-45563725)
chr1 (448-504)||(49291966-49292022)
chr1 (451-504)||(33299704-33299757)
chr1 (452-504)||(1060314-1060366)
chr1 (448-504)||(7412203-7412259)
chr1 (448-494)||(7625703-7625749)
chr1 (452-504)||(8318754-8318806)
chr1 (435-502)||(47479320-47479387)
chr1 (448-502)||(16176338-16176392)
chr1 (454-504)||(34824519-34824569)
chr1 (408-492)||(45481259-45481343)
chr1 (452-504)||(47684923-47684975)
chr1 (443-498)||(34707992-34708046)
chr1 (462-500)||(3737513-3737551)
chr1 (455-504)||(18340958-18341007)
chr1 (448-493)||(28750664-28750709)
chr1 (452-496)||(9171873-9171917)
chr1 (452-496)||(9179855-9179899)
chr1 (456-504)||(11336181-11336229)
chr1 (456-504)||(11494200-11494248)
chr1 (448-492)||(27070464-27070508)
chr1 (448-504)||(47141650-47141706)
[»] chr6 (7 HSPs)
chr6 (402-504)||(26542506-26542608)
chr6 (409-504)||(27840980-27841076)
chr6 (408-490)||(12693624-12693705)
chr6 (448-504)||(3546000-3546056)
chr6 (403-490)||(15120623-15120711)
chr6 (409-500)||(7026946-7027038)
chr6 (445-489)||(21803435-21803479)
[»] chr3 (18 HSPs)
chr3 (408-504)||(12830519-12830615)
chr3 (408-504)||(49864792-49864888)
chr3 (403-502)||(39555245-39555344)
chr3 (448-502)||(17229086-17229140)
chr3 (422-504)||(28405023-28405106)
chr3 (410-504)||(32739654-32739748)
chr3 (403-504)||(46250088-46250190)
chr3 (402-502)||(33760961-33761064)
chr3 (448-504)||(11150082-11150138)
chr3 (448-492)||(36841418-36841462)
chr3 (435-500)||(33014359-33014424)
chr3 (468-504)||(51380380-51380416)
chr3 (472-503)||(647833-647864)
chr3 (402-504)||(32959130-32959235)
chr3 (454-496)||(42998676-42998718)
chr3 (448-504)||(23605892-23605946)
chr3 (452-500)||(9227670-9227718)
chr3 (349-381)||(49864894-49864926)
[»] chr4 (24 HSPs)
chr4 (406-504)||(16590338-16590436)
chr4 (403-504)||(22523373-22523475)
chr4 (448-504)||(21295012-21295068)
chr4 (402-504)||(33634652-33634755)
chr4 (402-504)||(54178398-54178502)
chr4 (456-504)||(30106192-30106240)
chr4 (404-502)||(34766515-34766613)
chr4 (441-502)||(2178307-2178368)
chr4 (451-504)||(7784146-7784199)
chr4 (448-504)||(9392600-9392656)
chr4 (422-504)||(20446443-20446526)
chr4 (402-504)||(53258679-53258782)
chr4 (426-503)||(5651741-5651817)
chr4 (451-492)||(53456146-53456187)
chr4 (449-497)||(27531194-27531242)
chr4 (448-504)||(32038228-32038284)
chr4 (448-502)||(43904638-43904692)
chr4 (410-498)||(37041613-37041702)
chr4 (450-499)||(42932356-42932405)
chr4 (448-504)||(44970761-44970817)
chr4 (452-498)||(42238754-42238801)
chr4 (454-504)||(42890351-42890401)
chr4 (451-504)||(7764056-7764109)
chr4 (448-497)||(30535811-30535859)
[»] chr7 (16 HSPs)
chr7 (408-504)||(39390662-39390758)
chr7 (402-502)||(17040287-17040388)
chr7 (448-504)||(41161282-41161338)
chr7 (448-504)||(38603875-38603931)
chr7 (448-504)||(44416019-44416075)
chr7 (402-504)||(43212865-43212971)
chr7 (422-498)||(15314579-15314658)
chr7 (448-492)||(19738409-19738453)
chr7 (426-504)||(9104060-9104138)
chr7 (448-499)||(48177010-48177061)
chr7 (349-391)||(39390777-39390819)
chr7 (402-500)||(42498617-42498717)
chr7 (468-502)||(44699236-44699270)
chr7 (448-504)||(8293601-8293657)
chr7 (468-504)||(32228241-32228277)
chr7 (452-500)||(35180732-35180780)
[»] chr8 (17 HSPs)
chr8 (409-498)||(13343548-13343638)
chr8 (402-504)||(36396714-36396817)
chr8 (402-504)||(42586661-42586764)
chr8 (448-504)||(10011225-10011281)
chr8 (448-504)||(6893719-6893775)
chr8 (448-504)||(9682685-9682741)
chr8 (448-504)||(12178186-12178242)
chr8 (448-504)||(12422614-12422670)
chr8 (402-477)||(32550074-32550150)
chr8 (456-504)||(39333652-39333700)
chr8 (410-502)||(1596617-1596710)
chr8 (410-504)||(26802173-26802269)
chr8 (448-489)||(3941238-3941279)
chr8 (448-504)||(26991261-26991317)
chr8 (462-504)||(22704921-22704963)
chr8 (448-504)||(6148001-6148057)
chr8 (403-431)||(41198231-41198259)
[»] chr5 (18 HSPs)
chr5 (352-504)||(4576545-4576695)
chr5 (404-504)||(1761723-1761822)
chr5 (402-504)||(16159281-16159381)
chr5 (406-504)||(32125455-32125554)
chr5 (422-504)||(19131318-19131402)
chr5 (448-504)||(29930718-29930774)
chr5 (402-504)||(19459651-19459754)
chr5 (402-504)||(37523228-37523331)
chr5 (402-504)||(37563400-37563503)
chr5 (448-504)||(5271933-5271989)
chr5 (402-504)||(37687968-37688072)
chr5 (445-504)||(2271191-2271250)
chr5 (410-479)||(14103175-14103243)
chr5 (448-500)||(36145481-36145533)
chr5 (426-502)||(14922957-14923034)
chr5 (467-503)||(7669831-7669867)
chr5 (472-504)||(32201780-32201812)
chr5 (462-502)||(42248553-42248593)
[»] chr2 (15 HSPs)
chr2 (402-504)||(43973414-43973517)
chr2 (402-502)||(11476215-11476317)
chr2 (402-502)||(42714205-42714305)
chr2 (448-502)||(40896181-40896235)
chr2 (402-500)||(38455345-38455447)
chr2 (419-492)||(12483159-12483233)
chr2 (448-504)||(21501517-21501573)
chr2 (448-504)||(41044480-41044536)
chr2 (454-504)||(6128159-6128209)
chr2 (454-502)||(34810084-34810133)
chr2 (448-492)||(12511313-12511357)
chr2 (452-504)||(27577823-27577874)
chr2 (463-502)||(18209657-18209696)
chr2 (448-491)||(33259931-33259974)
chr2 (448-485)||(31510240-31510277)
[»] scaffold0068 (1 HSPs)
scaffold0068 (402-489)||(58465-58553)
[»] scaffold0025 (1 HSPs)
scaffold0025 (448-504)||(66704-66760)
[»] scaffold0571 (1 HSPs)
scaffold0571 (448-502)||(9311-9366)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 1e-91; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 158 - 504
Target Start/End: Complemental strand, 24060231 - 24059889
Alignment:
Q  158 aactagatgactcaatctcaaataatttataacacacataatttaaagaaatcactacacaaattcacaagctcacttttcatcttcaatataattatgg 257  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24060231 aactagatgactcaatctcaaataattta--acacacataatttaaagaaatcactacacaaattcacaagctcacttttcatcttcaatacaattatgg 24060134  T
Q  258 gtgcgtttgatttagcttttnnnnnnntagattctcaatctgtgttaaaataatttagagaannnnnnnnnagaattttgnnnnnnnnnnntctaaagct 357  Q
    |||||||| ||||||||||        |||||||||| |||||||||||||||| ||||| |         |||||||||           ||||||| |    
T  24060133 gtgcgtttcatttagctttaaaaaaaatagattctcattctgtgttaaaataatctagag-attttttcttagaattttg----aaaaaaatctaaagtt 24060039  T
Q  358 atttgtgtttgtcaactacacaaacaaagtg---attannnnnnnncaaaatgatttttaactagttcatgtgttacgtctttgttttttaataaataga 454  Q
    |||||||||||||||||||||||||||||||   ||||        ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24060038 atttgtgtttgtcaactacacaaacaaagtgattattattttttttcaaaatgatttttaactagttcatgtgttacgtctttgttttttaataaatgga 24059939  T
Q  455 ttttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  24059938 ttttgagaaaaactaatcctaatagcttttcattttagagtcaaaataga 24059889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 24060401 - 24060245
Alignment:
Q  18 agagtagtgggtcattagtgatggattgaaccagtgttttattgattgaaccacatgattgagttagattgaaatagatgattcaattgatcatatcatc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24060401 agagtagtgggtcattagtgatggattgaaccagtgttttattgattgaaccacatgattcagttagattgaaatagatgattcaattgatcatatcatc 24060302  T
Q  118 caatctttatgaaaaattacttttgtttttaactagatttaactagatgactcaatc 174  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24060301 cgatctttatgaaaaattacttttgtttttaactagatttaactagatgactcaatc 24060245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 45563725 - 45563669
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45563725 aaattgattttgagaaaagttaatcctaatagctttttattttagagtcaaaataga 45563669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 49292022 - 49291966
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  49292022 aaatagattttgagaaaagctaatcctaatagctttttattttagggtcaaaataga 49291966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 33299704 - 33299757
Alignment:
Q  451 tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  33299704 tagattttgagaaaaactaatcctaatagcttttcattttagggtcaaaataga 33299757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 452 - 504
Target Start/End: Original strand, 1060314 - 1060366
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  1060314 agattttgagaaaagctaattctaatagcttttcattttagggtcaaaataga 1060366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 7412203 - 7412259
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||    
T  7412203 aaatagattttgagaagaactaatcctaatagcttttcattttagggtcaaaataga 7412259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 448 - 494
Target Start/End: Complemental strand, 7625749 - 7625703
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagag 494  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  7625749 aaatagattttgagaaaagttaatcctaataacttttcaatttagag 7625703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 504
Target Start/End: Original strand, 8318754 - 8318806
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||| |||| |||||||||||||||||||| || ||||||||    
T  8318754 agattttgagaaaagctaattctaatagcttttcattttagggtaaaaataga 8318806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 47479320 - 47479387
Alignment:
Q  435 tttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||||||| |||| ||||||||| |||  |||||||||||  |||| |||||||||||||||||    
T  47479320 tttgttttttaaaaaatggattttgaggaaaactaatcctaataattttttattttagagtcaaaata 47479387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 16176338 - 16176392
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||    
T  16176338 aaatagactttgagaaaagataatcttaatagctttttattttagagccaaaata 16176392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 504
Target Start/End: Complemental strand, 34824569 - 34824519
Alignment:
Q  454 attttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  34824569 attttgagaaaagctaatcataatagcttttcattttaggatcaaaataga 34824519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 492
Target Start/End: Original strand, 45481259 - 45481343
Alignment:
Q  408 atttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    ||||||||||| || ||||||||| || |||||||  || ||||||||||||  || |||| ||| ||||||||||| |||||||    
T  45481259 atttttaactaatttatgtgttacctccttgttttgaaagaaatagattttggaaatagttcatcttaatagctttttattttag 45481343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 504
Target Start/End: Original strand, 47684923 - 47684975
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||| |||| ||||||||||||||||||   ||||||||||    
T  47684923 agattttgagaaaagtaaatcataatagcttttcattttaagatcaaaataga 47684975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 34708046 - 34707992
Alignment:
Q  443 ttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaa 498  Q
    |||| |||||||||||| |||||| ||||||| |||||||| ||||||||||||||    
T  34708046 ttaaaaaatagattttgggaaaagctaatcct-atagctttccattttagagtcaa 34707992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 500
Target Start/End: Complemental strand, 3737551 - 3737513
Alignment:
Q  462 aaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  3737551 aaaaattaatcctaatagcttttcaatttagagtcaaaa 3737513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 18341007 - 18340958
Alignment:
Q  455 ttttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||| ||||||||||||||||| ||||| |||||||  ||||||||||    
T  18341007 ttttgaaaaaagttaatcctaataactttttattttaggatcaaaataga 18340958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 28750709 - 28750664
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttaga 493  Q
    |||||||||||   ||||||||||||||||||||||| ||||||||    
T  28750709 aaatagattttagaaaaagttaatcctaatagcttttaattttaga 28750664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 496
Target Start/End: Original strand, 9171873 - 9171917
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtc 496  Q
    ||||||||||||||| ||||| ||||||||||| |||||| ||||    
T  9171873 agattttgagaaaagctaatcttaatagctttttattttaaagtc 9171917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 496
Target Start/End: Original strand, 9179855 - 9179899
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtc 496  Q
    ||||||||||||||| ||||| ||||||||||| |||||| ||||    
T  9179855 agattttgagaaaagctaatcttaatagctttttattttaaagtc 9179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 11336229 - 11336181
Alignment:
Q  456 tttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||| |||||    
T  11336229 tttgaaaaaagctaatcctaatagcttttcatattagggtcaagataga 11336181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 11494248 - 11494200
Alignment:
Q  456 tttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||| |||||    
T  11494248 tttgaaaaaagctaatcctaatagcttttcatattagggtcaagataga 11494200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 27070464 - 27070508
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||    
T  27070464 aaattgattttggaaaaagttaatcgtaatagcttttcattttag 27070508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 47141650 - 47141706
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||  |||| |||||  ||||||||||||  |||||||||||    
T  47141650 aaatagattttgagaaaaactaattctaatgacttttcattttatggtcaaaataga 47141706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 26542608 - 26542506
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 501  Q
    |||||||||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26542608 aaaatgatttttaactagttcatgtgttacctctttgtttttaaaaaaattgattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 26542509  T
Q  502 aga 504  Q
    |||    
T  26542508 aga 26542506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 409 - 504
Target Start/End: Original strand, 27840980 - 27841076
Alignment:
Q  409 tttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||||||| |  |||||||| || ||| || ||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  27840980 tttttaactagttcatgtgttaccttcttgtttttgaaaaaaatatattttgagaaaaactaatcctaatagcttttcattttagagttaaaataga 27841076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 490
Target Start/End: Complemental strand, 12693705 - 12693624
Alignment:
Q  408 atttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcatttt 490  Q
    |||||||||||||||||||||||  |||||| |||| || |||||| ||||||||||||||||| | ||||| ||||||||||    
T  12693705 atttttaactagttcatgtgttatctctttgcttttgaaaaaatagtttttgagaaaagttaattcaaatag-ttttcatttt 12693624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 3546000 - 3546056
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| ||||||||||||| |||||||||||| |||||| ||||| |||||||||||    
T  3546000 aaataaattttgagaaaagctaatcctaatagtttttcaatttagggtcaaaataga 3546056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 490
Target Start/End: Complemental strand, 15120711 - 15120623
Alignment:
Q  403 aaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcatttt 490  Q
    |||| ||||||||||||||| ||| |||| || || | ||| || ||| ||||||| |||||||| |||||||||||| ||||||||||    
T  15120711 aaataatttttaactagttcgtgtcttacctccttatgtttgaaaaaaatagatttcgagaaaagctaatcctaatagtttttcatttt 15120623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 500
Target Start/End: Original strand, 7026946 - 7027038
Alignment:
Q  409 tttttaactagttcatgtgttacgtctttgttttttaataa-atagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||||  |||| || ||||| || |||||||| || || ||| |||||| |||||  |||||||||||| ||| ||||||||||||||||    
T  7026946 tttttaacctgttcttgagttacttccttgtttttgaaaaatatatattttgggaaaaactaatcctaatagttttacattttagagtcaaaa 7027038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 21803435 - 21803479
Alignment:
Q  445 aataaatagattttgagaaaagttaatcctaatagcttttcattt 489  Q
    |||||||| ||||||| |||| ||||||||||||| |||||||||    
T  21803435 aataaatatattttgaaaaaaattaatcctaatagtttttcattt 21803479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 408 - 504
Target Start/End: Complemental strand, 12830615 - 12830519
Alignment:
Q  408 atttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  12830615 atttttaactagttcatgtgttacctctttgtttttgaaaaaatggattttgagaaaagctaaccctgatagcttttcattttagagtcaaaataga 12830519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 408 - 504
Target Start/End: Complemental strand, 49864888 - 49864792
Alignment:
Q  408 atttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||| ||||||||||||||||| ||||||||||  || |||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  49864888 atttttgactagttcatgtgttacctctttgttttagaaaaaatggattttggaaaaagctaatcctaatagcttttcattttagagtcaaaataga 49864792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 403 - 502
Target Start/End: Complemental strand, 39555344 - 39555245
Alignment:
Q  403 aaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 501  Q
    ||||||||||||||||||||||||||||| ||  ||| ||| || ||| |||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  39555344 aaatgatttttaactagttcatgtgttacctc-ctgtatttgaaaaaattagattttcaaaaaagctaatcctaatagcttttcattttagagtcaaaat 39555246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 17229140 - 17229086
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17229140 aaatagattttgagaaaagttaatcctaatagcttttcattttagaatcaaaata 17229086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 422 - 504
Target Start/End: Original strand, 28405023 - 28405106
Alignment:
Q  422 catgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||| || |||||||| || ||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  28405023 catgtgttacctccttgtttttgaaaaaaatagaatttgagaaaagctaatcctaatagcttttcattttagggtcaaaataga 28405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 410 - 504
Target Start/End: Complemental strand, 32739748 - 32739654
Alignment:
Q  410 ttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| |||||||||||||||| || |||||||| || ||||| ||||||| ||||| |||||||| ||| |||||||||| |||| ||||||||    
T  32739748 ttttagctagttcatgtgttacctccttgtttttgaaaaaataaattttgacaaaagctaatcctattagtttttcattttggagtgaaaataga 32739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 403 - 504
Target Start/End: Original strand, 46250088 - 46250190
Alignment:
Q  403 aaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 501  Q
    |||||| |||||||| || |||| | ||| || |||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  46250088 aaatgagttttaacttgtacatgagctacctccttgtttttgaaaaaaatagattttgagaaaaggtaatcctaatagcttttcattttatggtcaaaat 46250187  T
Q  502 aga 504  Q
    |||    
T  46250188 aga 46250190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 33760961 - 33761064
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa--tagattttgagaaaa-gttaatcctaatagcttttcattttagagtcaa 498  Q
    ||||| || ||||||||||||||||||||| ||||| ||||| || |||  ||||||||  ||||| | |||||||||||| ||||||||||||||||||    
T  33760961 aaaattatctttaactagttcatgtgttacctctttatttttgaaaaaaactagatttttggaaaaagctaatcctaatagattttcattttagagtcaa 33761060  T
Q  499 aata 502  Q
    ||||    
T  33761061 aata 33761064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 11150082 - 11150138
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  11150082 aaatggattttgagaaaagctaaccctaatagcttttcattttagggtcaaaataga 11150138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 36841418 - 36841462
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  36841418 aaatagattttgagaaaagttaatcctaacagcttttcattttag 36841462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 33014359 - 33014424
Alignment:
Q  435 tttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||||| || ||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||    
T  33014359 tttgtttttgaaaaaatagattttgagaaaagctaatcttaatagcttttgatattagaatcaaaa 33014424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 504
Target Start/End: Original strand, 51380380 - 51380416
Alignment:
Q  468 taatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||||||||||||||||||||    
T  51380380 taatcctaatagcttttcattttagagtcaaaataga 51380416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 503
Target Start/End: Original strand, 647833 - 647864
Alignment:
Q  472 cctaatagcttttcattttagagtcaaaatag 503  Q
    ||||||||||||||||||||||||||||||||    
T  647833 cctaatagcttttcattttagagtcaaaatag 647864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 32959235 - 32959130
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaata---gattttgagaaaagttaatcctaatagcttttcattttagagtcaa 498  Q
    ||||||| |||||||  || |||||||||| || |||||||| || ||| |   |||||||||||||  ||||  ||||||||||| ||||||||| |||    
T  32959235 aaaatgagttttaacatgtgcatgtgttacctccttgtttttgaaaaaaaaaatgattttgagaaaaactaattttaatagctttttattttagagccaa 32959136  T
Q  499 aataga 504  Q
    ||||||    
T  32959135 aataga 32959130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 496
Target Start/End: Complemental strand, 42998718 - 42998676
Alignment:
Q  454 attttgagaaaagttaatcctaatagcttttcattttagagtc 496  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  42998718 attttgagaaaaattaatctcaatagcttttcattttagagtc 42998676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 23605946 - 23605892
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||   ||||| || ||||||||||||||| |||||||||||    
T  23605946 aaatagattttgagaaaaa--aatcccaacagcttttcattttagggtcaaaataga 23605892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 500
Target Start/End: Original strand, 9227670 - 9227718
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    |||||||| ||||||||| || ||||||||||| |||||||||| ||||    
T  9227670 agattttgggaaaagttactcttaatagctttttattttagagtaaaaa 9227718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 49864926 - 49864894
Alignment:
Q  349 tctaaagctatttgtgtttgtcaactacacaaa 381  Q
    |||||||||||||||||||||||||||| ||||    
T  49864926 tctaaagctatttgtgtttgtcaactacccaaa 49864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 504
Target Start/End: Complemental strand, 16590436 - 16590338
Alignment:
Q  406 tgatttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||| |||||| || ||||||||||| || |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  16590436 tgatttttaactagtttatgtgtcacctctttgtttttgaaaaaatggattttgataaaagttaatcctaatagcttttcattttaaagtcaaaataga 16590338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 403 - 504
Target Start/End: Original strand, 22523373 - 22523475
Alignment:
Q  403 aaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 501  Q
    |||||| |||||||| || ||| |||||| || |||||||| || ||| |||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  22523373 aaatgagttttaacttgtacatttgttacctccttgtttttgaaaaaaatagattttgagaaaagctaatccaaatagcttttcattttagggtcaaaat 22523472  T
Q  502 aga 504  Q
    |||    
T  22523473 aga 22523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 21295068 - 21295012
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21295068 aaatagattttaagaaaagttaatcctaatagcttttcattttagggtcaaaataga 21295012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 33634652 - 33634755
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||| || |||||||||| || ||||| || || ||| |||||||| ||||||| |||||||||||||||||||||||||  ||||||    
T  33634652 aaaatgagttttaacttgtacatgtgttacctccttgttgttgaaaaaaatagattttaagaaaagctaatcctaatagcttttcattttaggatcaaaa 33634751  T
Q  501 taga 504  Q
    ||||    
T  33634752 taga 33634755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 54178502 - 54178398
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctt--tgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaa 499  Q
    |||||| |||||||||||||||||| |||| || |  |||||   || ||||||||||||| ||||| ||||||| |||||||||||||||||||| |||    
T  54178502 aaaatgttttttaactagttcatgtcttacctcataatgtttgaaaaaaaatagattttgaaaaaagctaatccttatagcttttcattttagagtgaaa 54178403  T
Q  500 ataga 504  Q
    |||||    
T  54178402 ataga 54178398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 456 - 504
Target Start/End: Original strand, 30106192 - 30106240
Alignment:
Q  456 tttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30106192 tttgagaaaagctaatcctaatagcttttcattttagagtcaaaataga 30106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 502
Target Start/End: Complemental strand, 34766613 - 34766515
Alignment:
Q  404 aatgatttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||||||||||||| |||| ||||  | |||||||||  |||||||||||| | |||| ||||||||||||  |||| |||||| ||||||||||    
T  34766613 aatgatttttaactagtttatgttttaccgccttgtttttttttaaatagatttttaaaaaaattaatcctaataattttttattttaaagtcaaaata 34766515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 2178307 - 2178368
Alignment:
Q  441 ttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||| ||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  2178307 ttttaaaaaatagattttgagaaaagctaatcctaatagatttttattttagagttaaaata 2178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 7784146 - 7784199
Alignment:
Q  451 tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  7784146 tagattttgagaaaagttaatccttatagcttttcattttagggtcaaactaga 7784199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 9392600 - 9392656
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  9392600 aaataaattttgagaaaagctaatcctaatagcttttcattttaatgtcaaaataga 9392656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 504
Target Start/End: Original strand, 20446443 - 20446526
Alignment:
Q  422 catgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||| || |||||||| || ||| | |||| | |||||||||||||||||||||||||||||||||  ||||||||||    
T  20446443 catgtgttacctccttgtttttgaaaaaacttgattataagaaaagttaatcctaatagcttttcattttaggatcaaaataga 20446526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 53258679 - 53258782
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataa-atagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| ||||| || || |||  ||||| || |||||||| || || |||||||| |||||||| ||||||||||||||||||||||||| || ||||    
T  53258679 aaaatgagttttaccttgtacattggttacctcattgtttttgaaaaacatagatttcgagaaaagctaatcctaatagcttttcattttagggttaaaa 53258778  T
Q  501 taga 504  Q
    ||||    
T  53258779 taga 53258782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 5651741 - 5651817
Alignment:
Q  426 tgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaatag 503  Q
    |||||| || ||||||||||| |||||| |||| ||||||| ||||| ||||||| |||||||||||||| |||||||    
T  5651741 tgttacctccttgttttttaaaaaatagttttt-agaaaagctaatcataatagcatttcattttagagtgaaaatag 5651817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 451 - 492
Target Start/End: Original strand, 53456146 - 53456187
Alignment:
Q  451 tagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  53456146 tagattttgagaaaagctaatcctaatagcttttcattttag 53456187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 27531194 - 27531242
Alignment:
Q  449 aatagattttgagaaaagttaatcctaatagcttttcattttagagtca 497  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  27531194 aatagattttgagaaaagctaatcctaatagcatttcattttagggtca 27531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 32038228 - 32038284
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| |||| ||||||| |||| |||||| ||||||||||||    
T  32038228 aaatagattttgagaaaagctaattctaatagatttttattttaaagtcaaaataga 32038284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 43904638 - 43904692
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||||| |||||||  |||||||||||| ||||||||||| ||||||||||    
T  43904638 aaatagatttcgagaaaaactaatcctaatagtttttcattttatagtcaaaata 43904692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 498
Target Start/End: Complemental strand, 37041702 - 37041613
Alignment:
Q  410 ttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatc-ctaatagcttttcattttagagtcaa 498  Q
    |||||||| || || ||||||| || ||| |||| || |||||||||||||||||||||||||  ||| ||||||| |||| ||||||||    
T  37041702 ttttaacttgtacaagtgttacctccttgcttttgaaaaaatagattttgagaaaagttaatctttaagagctttttatttgagagtcaa 37041613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 450 - 499
Target Start/End: Original strand, 42932356 - 42932405
Alignment:
Q  450 atagattttgagaaaagttaatcctaatagcttttcattttagagtcaaa 499  Q
    |||||||||| |||||| |||||||||||||  |||||||||||||||||    
T  42932356 atagattttgggaaaagctaatcctaatagccattcattttagagtcaaa 42932405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 44970761 - 44970817
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||| ||||||||||| ||||||||| | ||||||||| || ||||||||||||    
T  44970761 aaatagaatttgagaaaagataatcctaacaacttttcattataaagtcaaaataga 44970817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 498
Target Start/End: Original strand, 42238754 - 42238801
Alignment:
Q  452 agattttgagaaaagttaatcctaatag-cttttcattttagagtcaa 498  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||    
T  42238754 agattttgagaaaagttaatcctaattgatttttcattttagagtcaa 42238801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 504
Target Start/End: Original strand, 42890351 - 42890401
Alignment:
Q  454 attttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||| |||||| |||||| ||| | ||||||||||||||||||||||||    
T  42890351 attttgggaaaagctaatcccaatcgattttcattttagagtcaaaataga 42890401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 7764056 - 7764109
Alignment:
Q  451 tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||| || |||| ||||||||||||||||  |||||| ||||    
T  7764056 tagattttgagaaaagctattccttatagcttttcattttacggtcaaactaga 7764109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 497
Target Start/End: Original strand, 30535811 - 30535859
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtca 497  Q
    |||||||||||| |||||| ||||||||||||| |||||||||| |||||    
T  30535811 aaatagattttgggaaaagctaatcctaatagc-tttcattttaaagtca 30535859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 6e-26; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 408 - 504
Target Start/End: Complemental strand, 39390758 - 39390662
Alignment:
Q  408 atttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||| ||||| |||||||   ||||||||||| || | || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39390758 atttttaattagtttatgtgttctctctttgtttttgaaaagatggattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 39390662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 17040287 - 17040388
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||| ||||||||||||| || |||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||| || ||||    
T  17040287 aaaatgaattttaacttgttcatgtgttacctccttgtttttgaaaaaaatagattttaagaaaagttaatcctaatagcttttcattttagggttaaaa 17040386  T
Q  501 ta 502  Q
    ||    
T  17040387 ta 17040388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 41161338 - 41161282
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41161338 aaatagattttgagaaaagctaatcctaatagcttttcattttagagtcaaaataga 41161282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 38603931 - 38603875
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  38603931 aaatagattttgagaaaagctaatcctaatagcttttcattttagggtcaaaataga 38603875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 44416019 - 44416075
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  44416019 aaatagattttgagaaaagttaatccaaatagctttttattttagagtcaaaataga 44416075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 43212971 - 43212865
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaata----gattttgagaaaagttaatcctaatagcttttcattttagagtca 497  Q
    |||||||  ||||||| || |||||||||| || |||||||| || ||| |    ||||||||||||||||||| |||||||||||||||||||| | ||    
T  43212971 aaaatgagatttaacttgtacatgtgttacctccttgtttttaaaaaaaaaaattgattttgagaaaagttaattctaatagcttttcattttagggaca 43212872  T
Q  498 aaataga 504  Q
    |||||||    
T  43212871 aaataga 43212865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 498
Target Start/End: Original strand, 15314579 - 15314658
Alignment:
Q  422 catgtgttacgtctttgttttttaataaa--tagattttgagaaaa-gttaatcctaatagcttttcattttagagtcaa 498  Q
    |||||||||| || |||||||| || |||  ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15314579 catgtgttacctccttgtttttaaaaaaaaatagattttgggaaaaagttaatcctaatagcttttcattttagagtcaa 15314658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 19738409 - 19738453
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  19738409 aaatagattttgagaaaagctaatcctaatagcttttcattttag 19738453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 504
Target Start/End: Complemental strand, 9104138 - 9104060
Alignment:
Q  426 tgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||| ||||||||||| || ||| |   |||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  9104138 tgttacctctttgtttttgaagaaaaaatatttgtgaaaaattaatcctaatagcctttcattttagagtcaaaataga 9104060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 499
Target Start/End: Original strand, 48177010 - 48177061
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaa 499  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||| ||||||    
T  48177010 aaatagattttaagaaaatttaatcctagtagcttttcattttagggtcaaa 48177061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 39390819 - 39390777
Alignment:
Q  349 tctaaagctatttgtgtttgtcaactacacaaacaaagtgatt 391  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  39390819 tctaaagctatttgtgtttgtcaactacacaaaaaaaatgatt 39390777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 500
Target Start/End: Complemental strand, 42498717 - 42498617
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttt---taataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaa 498  Q
    |||| |||||||||||||||||||| |||| |||||||||||    || ||| |||||||| ||||   |||||| ||||| |||| |||||||||||||    
T  42498717 aaaaagatttttaactagttcatgtcttacctctttgtttttgaaaaaaaaaaagattttgggaaagaataatcccaatag-tttttattttagagtcaa 42498619  T
Q  499 aa 500  Q
    ||    
T  42498618 aa 42498617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 502
Target Start/End: Complemental strand, 44699270 - 44699236
Alignment:
Q  468 taatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||| ||||||||||||||||||||||||||    
T  44699270 taatcctattagcttttcattttagagtcaaaata 44699236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 8293657 - 8293601
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| |||| || ||| ||||||||| |||| ||||||||||||| ||||||||||    
T  8293657 aaataaatttcgaaaaaggttaatcctgatagattttcattttagaatcaaaataga 8293601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 468 - 504
Target Start/End: Original strand, 32228241 - 32228277
Alignment:
Q  468 taatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||||||||  ||||||||||    
T  32228241 taatcctaatagcttttcattttaggatcaaaataga 32228277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 500
Target Start/End: Complemental strand, 35180780 - 35180732
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||| || |||||| |||| |||||||||||||||||||||| |||||    
T  35180780 agattgtgggaaaagctaattctaatagcttttcattttagagacaaaa 35180732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 409 - 498
Target Start/End: Original strand, 13343548 - 13343638
Alignment:
Q  409 tttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaa 498  Q
    ||||||||||||||||||||||| ||||||||||| || ||| | ||||||| |||||| |||||||||||||||||||||||||||||||    
T  13343548 tttttaactagttcatgtgttacctctttgtttttgaaaaaaatggattttgggaaaagctaatcctaatagcttttcattttagagtcaa 13343638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 36396714 - 36396817
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgtttttta-ataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||| || |||||||||| |  |||| ||| | | ||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  36396714 aaaatgagttttaacttgtacatgtgttaccttcttgtgtttgagaaaaatagattttgagaaaagctaatcctaatagcttttcattttagggtcaaaa 36396813  T
Q  501 taga 504  Q
    ||||    
T  36396814 taga 36396817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 42586661 - 42586764
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgt-tttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    |||| |||||||||||||||||||| || | || |||| | |  || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  42586661 aaaaagatttttaactagttcatgtcttgcctccttgtgtctgaaaaaaatagattttgagaaaagctaatcctaatagcttttcattttagagtcataa 42586760  T
Q  501 taga 504  Q
    ||||    
T  42586761 taga 42586764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 10011225 - 10011281
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  10011225 aaatagattttgagaaaagctaatcctaatagcttttcattttagggtcaaaataga 10011281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 6893775 - 6893719
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  6893775 aaatagattttgagaaaaactaatcctaatagcttttcattttaaggtcaaaataga 6893719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 9682741 - 9682685
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||    
T  9682741 aaatagattttgagaaaagctaaccctaatagcttttcattttagggtcgaaataga 9682685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 12178186 - 12178242
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||||    
T  12178186 aaatagattttgagaaaagctaatcctaatagttttttattttagagtgaaaataga 12178242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 12422614 - 12422670
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||||    
T  12422614 aaatagattttgagaaaagctaatcctaatagttttttattttagagtgaaaataga 12422670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 477
Target Start/End: Complemental strand, 32550150 - 32550074
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaat 477  Q
    |||| ||||||||||| ||||||||||||| || |||||||| || ||| |||||||||||||||| ||||||||||    
T  32550150 aaaaagatttttaacttgttcatgtgttacctccttgtttttgaaaaaaatagattttgagaaaagctaatcctaat 32550074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 456 - 504
Target Start/End: Original strand, 39333652 - 39333700
Alignment:
Q  456 tttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  39333652 tttgagaaaagttaatcctaatagtttttcattttagaatcaaaataga 39333700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 502
Target Start/End: Original strand, 1596617 - 1596710
Alignment:
Q  410 ttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||| || |||||||||| || ||||| || || ||| |||||||| | ||||||||||||||||||||||| |||||||  ||||||||    
T  1596617 ttttaacttgtacatgtgttacctccttgttattgaaaaaaatagattttaataaaagttaatcctaatagctttttattttaggatcaaaata 1596710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 504
Target Start/End: Complemental strand, 26802269 - 26802173
Alignment:
Q  410 ttttaactagttcatgtgttacgtctttgttttttaataa--atagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||| || ||||| |||| || |||||||| || ||  ||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||    
T  26802269 ttttaacttgtacatgtcttacctccttgtttttgaaaaataataaattttgaaaaaagttaatcctaataaattttcattttagggtcaaaataga 26802173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 448 - 489
Target Start/End: Complemental strand, 3941279 - 3941238
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattt 489  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  3941279 aaattgattttgacaaaagttaatcctaatagcttttcattt 3941238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 26991317 - 26991261
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||| ||||||||||  ||||| ||||| ||||||||||||| |||||||||||    
T  26991317 aaatagactttgagaaaaactaatcataataccttttcattttagggtcaaaataga 26991261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 504
Target Start/End: Original strand, 22704921 - 22704963
Alignment:
Q  462 aaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||| |||||||||| |||| ||||||||    
T  22704921 aaaagttaatcctaatagtttttcattttggagtgaaaataga 22704963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 6148001 - 6148057
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| ||||||| ||||| ||||||||| ||||||||||||||   ||||||||||    
T  6148001 aaataaattttgaaaaaagctaatcctaaaagcttttcattttatgatcaaaataga 6148057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 431
Target Start/End: Complemental strand, 41198259 - 41198231
Alignment:
Q  403 aaatgatttttaactagttcatgtgttac 431  Q
    |||||||||||||||||||||||||||||    
T  41198259 aaatgatttttaactagttcatgtgttac 41198231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 352 - 504
Target Start/End: Original strand, 4576545 - 4576695
Alignment:
Q  352 aaagctatttgtgtttgtcaactacacaaacaaagtgattannnnnnnncaaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa- 450  Q
    |||||||||||||||||||||| || |||| |||||||||          ||| ||||||||||||||||||||| |||| ||||||||||| || |||     
T  4576545 aaagctatttgtgtttgtcaacgacccaaaaaaagtgatttcttttaa--aaactgatttttaactagttcatgtcttacctctttgtttttgaaaaaaa 4576642  T
Q  451 tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    | |||||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  4576643 tggattttaagaaaagttaatcctaatagcttttcatattagagt-aaaataga 4576695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 404 - 504
Target Start/End: Complemental strand, 1761822 - 1761723
Alignment:
Q  404 aatgatttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaatag 503  Q
    |||||||||||||||||||||||||||| || |||||||  || ||||||||||||| |||||||||||||||||  ||||||||||  ||| |||||||    
T  1761822 aatgatttttaactagttcatgtgttacctccttgttttaaaa-aaatagattttgaaaaaagttaatcctaataatttttcattttgaagtgaaaatag 1761724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 16159281 - 16159381
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 501  Q
    |||||||| ||||||||||||||||||||| |||||| |||| |  |||| ||||||| |||||| |||| |||||||||||  ||||||||||||||||    
T  16159281 aaaatgatgtttaactagttcatgtgttacctctttggttttgagaaaatggattttgggaaaagctaattctaatagcttt--attttagagtcaaaat 16159378  T
Q  502 aga 504  Q
    |||    
T  16159379 aga 16159381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 32125455 - 32125554
Alignment:
Q  406 tgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| |||||| || ||||| || || ||| ||||||||| |||||| ||||||||| |||||||||||||||||| ||||||||    
T  32125455 tgatttttaactagttcatatgttacctccttgttcttgaaaaaaatagattttgggaaaagctaatcctaacagcttttcattttagagtgaaaataga 32125554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 19131402 - 19131318
Alignment:
Q  422 catgtgttacgtctttgttttttaataa--atagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||| ||||||||||| || ||  ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  19131402 catgtgttacctctttgtttttgaaaaacaatagattttaaaaaaagttaatcctaatagcttttcattttagggtcaaaataga 19131318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 29930774 - 29930718
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  29930774 aaatagattttgagaaaagctaatcctaatagcttttcattttagggtcaaaataga 29930718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 19459754 - 19459651
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataa-atagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||| || || ||||||| || ||||| || || || ||||||||||||||||| |||||||||||||||||||||||||  ||||||    
T  19459754 aaaatgagttttaacttgtacacgtgttacctccttgttgttgaaaaagatagattttgagaaaagctaatcctaatagcttttcattttaggatcaaaa 19459655  T
Q  501 taga 504  Q
    ||||    
T  19459654 taga 19459651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 37523228 - 37523331
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||| || |||||||||| || ||||| || || ||| |||||||||||||||| ||||||||||||||||||||||||   ||||||    
T  37523228 aaaatgagttttaacttgtacatgtgttacctccttgttgttgaaaaaaatagattttgagaaaagctaatcctaatagcttttcattttatgatcaaaa 37523327  T
Q  501 taga 504  Q
    ||||    
T  37523328 taga 37523331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 37563400 - 37563503
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||| || |||||||||| || ||||| || || ||| |||||||||||||||| ||||||||||||||||||||||||   ||||||    
T  37563400 aaaatgagttttaacttgtacatgtgttacctccttgttgttgaaaaaaatagattttgagaaaagctaatcctaatagcttttcattttatgatcaaaa 37563499  T
Q  501 taga 504  Q
    ||||    
T  37563500 taga 37563503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 5271933 - 5271989
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  5271933 aaatagattttaagaaaagttaattctaataacttttcattttagagtcaaaataga 5271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 37687968 - 37688072
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgtttttt--aataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaa 499  Q
    ||||||| |||||||| || |||||||||| || |  ||| ||  || ||||||||||||||||||| ||||||||||||||||||||||||   |||||    
T  37687968 aaaatgagttttaacttgtacatgtgttacctcctcttttgttgaaaaaaatagattttgagaaaagctaatcctaatagcttttcattttatgatcaaa 37688067  T
Q  500 ataga 504  Q
    |||||    
T  37688068 ataga 37688072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 504
Target Start/End: Original strand, 2271191 - 2271250
Alignment:
Q  445 aataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||| |||| | |||| ||||||||||||| |||||||||||||||||| |||||    
T  2271191 aataaatagcttttaaaaaaaattaatcctaataggttttcattttagagtcaagataga 2271250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 479
Target Start/End: Original strand, 14103175 - 14103243
Alignment:
Q  410 ttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatag 479  Q
    ||||| |||||||||||||||| || |||||||| || ||||||||||||| ||||  ||||||||||||    
T  14103175 ttttagctagttcatgtgttacctccttgtttttgaaaaaatagattttga-aaaacctaatcctaatag 14103243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 500
Target Start/End: Original strand, 36145481 - 36145533
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    |||||||||||| || ||| ||||||||||||||||||||| || ||||||||    
T  36145481 aaatagattttgtgagaagctaatcctaatagcttttcattataaagtcaaaa 36145533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 14922957 - 14923034
Alignment:
Q  426 tgttacgtctttgttttttaataaatagattttgagaaaagt-taatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||| ||||||||||| || ||| | ||| ||| |||||  ||||| || ||||||||||||||||||||||||||    
T  14922957 tgttacctctttgtttttgaaaaaaaaaattatgaaaaaaggctaatcttagtagcttttcattttagagtcaaaata 14923034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 503
Target Start/End: Complemental strand, 7669867 - 7669831
Alignment:
Q  467 ttaatcctaatagcttttcattttagagtcaaaatag 503  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  7669867 ttaatcttaatagcttttcattttagggtcaaaatag 7669831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 32201780 - 32201812
Alignment:
Q  472 cctaatagcttttcattttagagtcaaaataga 504  Q
    |||||||||||||||||||| ||||||||||||    
T  32201780 cctaatagcttttcattttaaagtcaaaataga 32201812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 42248553 - 42248593
Alignment:
Q  462 aaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||| |||||||||||  |||||||||||||||||||||||    
T  42248553 aaaaattaatcctaatgccttttcattttagagtcaaaata 42248593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 504
Target Start/End: Complemental strand, 43973517 - 43973414
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaa-tagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaa 500  Q
    ||||||| |||||||  || |||||||||| || |||||||| || ||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  43973517 aaaatgagttttaacatgtacatgtgttacctccttgtttttgaaaaaaatagattttgagaaaagctaatcctaatagcttctcattttagggtcaaaa 43973418  T
Q  501 taga 504  Q
    ||||    
T  43973417 taga 43973414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 11476215 - 11476317
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaata--gattttgagaaaagttaatcctaatagcttttcattttagagtcaaa 499  Q
    ||||||| |||||||  || |||||||||| |||||||||   || ||| |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  11476215 aaaatgagttttaacatgtgcatgtgttacctctttgtttaaaaaaaaaaaaagattttgagaaaagctaatcctaatagcttttcattttagagtcaaa 11476314  T
Q  500 ata 502  Q
    |||    
T  11476315 ata 11476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 42714205 - 42714305
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaataaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaat 501  Q
    |||||||||||||| ||||| |||| || |  | || | ||| || ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  42714205 aaaatgatttttaaatagtttatgtctttcccccttatgtttaaaaaaatagattttgagaaaagctaatcctaatagttttttattttagagtcaaaat 42714304  T
Q  502 a 502  Q
    |    
T  42714305 a 42714305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 40896181 - 40896235
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  40896181 aaatagattttgagaaaagctaatcctaatagcttttcattttaggatcaaaata 40896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 38455345 - 38455447
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaa----taaatagattttgagaaaagttaatcctaatagcttttcattttagagtca 497  Q
    ||||| |||||||||||||||||||||||  |  |||| ||| ||    |||||||||||||| |||||||||||||||||| || |||||||||| |||    
T  38455345 aaaataatttttaactagttcatgtgttattttgttgtgtttgaaaaaataaatagattttgaaaaaagttaatcctaatagtttatcattttagaatca 38455444  T
Q  498 aaa 500  Q
    |||    
T  38455445 aaa 38455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 419 - 492
Target Start/End: Original strand, 12483159 - 12483233
Alignment:
Q  419 gttcatgtgttacgtctttgttttttaata-aatagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    ||||||||||||| || ||||||||||| | |||||| ||| ||||||| |||||||||||||||||||| ||||    
T  12483159 gttcatgtgttacctccttgttttttaaaagaatagactttcagaaaagctaatcctaatagcttttcatattag 12483233  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 21501517 - 21501573
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||| || ||||||||    
T  21501517 aaatagattttgagaaaagctaatcctgatagctttacattttagggtaaaaataga 21501573  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 41044480 - 41044536
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||    
T  41044480 aaatagattttgagaaaatctaattctaatagcttttcattttaggatcaaaataga 41044536  T

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Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 504
Target Start/End: Complemental strand, 6128209 - 6128159
Alignment:
Q  454 attttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||| || ||||||||||||||||||||| | ||||||||||    
T  6128209 attttgagaaaagctagtcctaatagcttttcattttaaaatcaaaataga 6128159  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 454 - 502
Target Start/End: Original strand, 34810084 - 34810133
Alignment:
Q  454 attttgagaaaag-ttaatcctaatagcttttcattttagagtcaaaata 502  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  34810084 attttgagaaaaaattaatcctaataacttttcattttagagtcaaaata 34810133  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 12511313 - 12511357
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttag 492  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||    
T  12511313 aaataaattttgagaaaagataatcctaacagcttttcattttag 12511357  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 504
Target Start/End: Complemental strand, 27577874 - 27577823
Alignment:
Q  452 agattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  27577874 agattttgagaaaagctaatc-taatagcttttcattttaggatcaaaataga 27577823  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 502
Target Start/End: Original strand, 18209657 - 18209696
Alignment:
Q  463 aaagttaatcctaatagcttttcattttagagtcaaaata 502  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  18209657 aaagttaatcctaatagcttttcattttagggtaaaaata 18209696  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 491
Target Start/End: Original strand, 33259931 - 33259974
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcatttta 491  Q
    |||| |||||||||||||| |||||||||| |||||||||||||    
T  33259931 aaattgattttgagaaaagctaatcctaatggcttttcatttta 33259974  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 485
Target Start/End: Complemental strand, 31510277 - 31510240
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttc 485  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  31510277 aaataaattttgagaaaagataatcctaatagcttttc 31510240  T

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Target: scaffold0068 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 489
Target Start/End: Complemental strand, 58553 - 58465
Alignment:
Q  402 aaaatgatttttaactagttcatgtgttacgtctttgttttttaa-taaatagattttgagaaaagttaatcctaatagcttttcattt 489  Q
    |||||||||||||||||| |||||| |||| || || | ||| || |||||||||||||| |||| || |||||||||| |||||||||    
T  58553 aaaatgatttttaactagctcatgtcttacctccttatgtttgaaataaatagattttgaaaaaaatttatcctaatagtttttcattt 58465  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 66760 - 66704
Alignment:
Q  448 aaatagattttgagaaaagttaatcctaatagcttttcattttagagtcaaaataga 504  Q
    ||||| ||||||||||||  |||||||||||| ||||||||||| ||| ||||||||    
T  66760 aaatatattttgagaaaaactaatcctaatagtttttcattttaaagttaaaataga 66704  T

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Target: scaffold0571 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 9366 - 9311
Alignment:
Q  448 aaatagattttgagaaaa-gttaatcctaatagcttttcattttagagtcaaaata 502  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||  ||||||||    
T  9366 aaatagattttgaaaaaaagctaatcctaatagcttttcattttaggatcaaaata 9311  T

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