View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9008_low_8 (Length: 496)

Name: NF9008_low_8
Description: NF9008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9008_low_8
NF9008_low_8
[»] chr4 (27 HSPs)
chr4 (14-297)||(12448615-12448901)
chr4 (361-467)||(12448513-12448619)
chr4 (85-158)||(7949409-7949482)
chr4 (86-154)||(40283942-40284010)
chr4 (85-154)||(49938791-49938860)
chr4 (85-158)||(4249225-4249298)
chr4 (85-158)||(9693453-9693526)
chr4 (85-158)||(21375825-21375898)
chr4 (85-158)||(51954162-51954235)
chr4 (85-158)||(7539638-7539710)
chr4 (85-158)||(8030159-8030232)
chr4 (85-146)||(18525420-18525481)
chr4 (85-158)||(31826657-31826730)
chr4 (85-158)||(32662802-32662875)
chr4 (85-158)||(37274414-37274487)
chr4 (89-144)||(20094175-20094230)
chr4 (92-158)||(18469545-18469611)
chr4 (80-158)||(28635744-28635822)
chr4 (80-158)||(31759608-31759686)
chr4 (129-158)||(5795408-5795437)
chr4 (85-158)||(13015475-13015548)
chr4 (85-158)||(33632091-33632164)
chr4 (85-158)||(37109306-37109379)
chr4 (85-158)||(49576849-49576922)
chr4 (85-158)||(51969065-51969138)
chr4 (95-139)||(14076394-14076438)
chr4 (86-158)||(53496925-53496997)
[»] chr7 (29 HSPs)
chr7 (85-158)||(21558176-21558249)
chr7 (85-158)||(15137601-15137674)
chr7 (85-158)||(29385698-29385771)
chr7 (80-155)||(30579386-30579461)
chr7 (85-158)||(26459365-26459438)
chr7 (85-154)||(41487411-41487480)
chr7 (85-158)||(41519220-41519292)
chr7 (85-157)||(7721418-7721490)
chr7 (85-158)||(9183146-9183219)
chr7 (85-158)||(17040967-17041040)
chr7 (85-158)||(18363744-18363816)
chr7 (89-158)||(20335790-20335859)
chr7 (85-158)||(37473662-37473735)
chr7 (108-156)||(4566406-4566454)
chr7 (86-158)||(26526338-26526409)
chr7 (85-152)||(48983688-48983755)
chr7 (82-120)||(27445076-27445114)
chr7 (85-158)||(30442536-30442607)
chr7 (80-153)||(33222423-33222496)
chr7 (85-158)||(2882998-2883070)
chr7 (89-150)||(4572256-4572317)
chr7 (129-158)||(7744111-7744140)
chr7 (85-158)||(25590659-25590732)
chr7 (85-158)||(27313689-27313762)
chr7 (85-158)||(29785256-29785329)
chr7 (85-158)||(39631892-39631965)
chr7 (85-158)||(43590955-43591028)
chr7 (85-137)||(34647596-34647648)
chr7 (85-157)||(43633251-43633323)
[»] chr2 (28 HSPs)
chr2 (85-158)||(11251135-11251208)
chr2 (85-158)||(21195631-21195704)
chr2 (85-158)||(35203338-35203411)
chr2 (85-154)||(1435116-1435184)
chr2 (85-154)||(11062412-11062480)
chr2 (85-158)||(16918533-16918606)
chr2 (85-158)||(21303949-21304022)
chr2 (85-158)||(42327350-42327423)
chr2 (85-158)||(42602602-42602675)
chr2 (85-157)||(2295961-2296033)
chr2 (85-145)||(25931067-25931127)
chr2 (83-158)||(26545888-26545963)
chr2 (88-158)||(34041546-34041616)
chr2 (85-154)||(4060169-4060238)
chr2 (85-138)||(11127958-11128011)
chr2 (85-158)||(12517709-12517781)
chr2 (85-158)||(25637199-25637272)
chr2 (85-158)||(26276403-26276476)
chr2 (85-158)||(29503319-29503391)
chr2 (89-158)||(31573600-31573669)
chr2 (85-158)||(33582021-33582094)
chr2 (85-158)||(37480123-37480196)
chr2 (85-154)||(38854417-38854486)
chr2 (85-154)||(38856117-38856186)
chr2 (85-122)||(42472358-42472395)
chr2 (85-157)||(2311773-2311845)
chr2 (80-158)||(4262256-4262330)
chr2 (114-158)||(45026791-45026835)
[»] chr3 (30 HSPs)
chr3 (85-158)||(160313-160386)
chr3 (87-158)||(44069806-44069877)
chr3 (85-158)||(27093317-27093389)
chr3 (85-158)||(52769938-52770011)
chr3 (85-144)||(33278975-33279034)
chr3 (85-158)||(4222189-4222262)
chr3 (85-158)||(30311354-30311427)
chr3 (85-158)||(54990750-54990823)
chr3 (85-158)||(24353336-24353407)
chr3 (85-158)||(8075082-8075155)
chr3 (85-158)||(8170720-8170793)
chr3 (85-158)||(8853754-8853827)
chr3 (87-156)||(11642166-11642235)
chr3 (85-158)||(13808840-13808913)
chr3 (85-158)||(19154679-19154752)
chr3 (92-157)||(29186498-29186563)
chr3 (85-158)||(33899662-33899735)
chr3 (85-158)||(37788421-37788493)
chr3 (85-158)||(49452921-49452993)
chr3 (107-158)||(14186695-14186746)
chr3 (95-158)||(32651403-32651466)
chr3 (80-118)||(2514889-2514927)
chr3 (80-158)||(10445089-10445167)
chr3 (85-158)||(2667910-2667983)
chr3 (85-158)||(14339658-14339731)
chr3 (85-158)||(17035034-17035107)
chr3 (129-158)||(17108897-17108926)
chr3 (85-158)||(46518676-46518749)
chr3 (85-122)||(46862599-46862636)
chr3 (85-158)||(51903833-51903906)
[»] chr1 (35 HSPs)
chr1 (85-158)||(15786276-15786348)
chr1 (85-158)||(6650643-6650716)
chr1 (88-158)||(10526871-10526941)
chr1 (85-158)||(6122842-6122915)
chr1 (85-158)||(52336729-52336802)
chr1 (87-158)||(48391289-48391360)
chr1 (85-155)||(29753700-29753770)
chr1 (92-158)||(33700735-33700801)
chr1 (85-158)||(2799910-2799983)
chr1 (85-158)||(4566596-4566668)
chr1 (85-158)||(12587318-12587390)
chr1 (89-158)||(17745216-17745284)
chr1 (85-158)||(21547435-21547508)
chr1 (85-158)||(25297820-25297893)
chr1 (85-158)||(44370835-44370908)
chr1 (85-158)||(44961813-44961886)
chr1 (85-124)||(6948032-6948071)
chr1 (84-158)||(35282406-35282478)
chr1 (85-124)||(46496526-46496565)
chr1 (85-158)||(952559-952632)
chr1 (85-158)||(1094573-1094646)
chr1 (85-158)||(1600247-1600320)
chr1 (89-154)||(4280410-4280475)
chr1 (85-158)||(8177137-8177210)
chr1 (85-158)||(12036335-12036408)
chr1 (85-158)||(13578672-13578745)
chr1 (85-158)||(45266882-45266955)
chr1 (129-158)||(51281399-51281428)
chr1 (85-157)||(1247162-1247234)
chr1 (84-156)||(11063606-11063678)
chr1 (85-157)||(15904660-15904732)
chr1 (85-157)||(16893443-16893515)
chr1 (85-156)||(40810517-40810588)
chr1 (85-125)||(43800157-43800197)
chr1 (87-147)||(48383922-48383982)
[»] scaffold0115 (1 HSPs)
scaffold0115 (87-156)||(42621-42690)
[»] chr8 (43 HSPs)
chr8 (85-158)||(11928686-11928759)
chr8 (85-158)||(33017262-33017334)
chr8 (85-158)||(44780069-44780142)
chr8 (91-158)||(6536568-6536635)
chr8 (85-158)||(11819824-11819897)
chr8 (85-158)||(13129716-13129789)
chr8 (85-158)||(33727828-33727901)
chr8 (99-158)||(23361618-23361677)
chr8 (85-156)||(43594273-43594344)
chr8 (85-154)||(18540350-18540419)
chr8 (80-150)||(36034471-36034541)
chr8 (85-158)||(11793476-11793549)
chr8 (85-158)||(16843750-16843822)
chr8 (85-158)||(16852388-16852461)
chr8 (85-158)||(27750778-27750851)
chr8 (85-158)||(28783108-28783181)
chr8 (85-158)||(35583647-35583720)
chr8 (113-158)||(35690047-35690092)
chr8 (85-153)||(31088726-31088794)
chr8 (85-153)||(44595810-44595878)
chr8 (95-158)||(19703452-19703515)
chr8 (85-156)||(27979207-27979278)
chr8 (85-156)||(28036476-28036547)
chr8 (85-123)||(11942536-11942574)
chr8 (92-158)||(14701379-14701445)
chr8 (85-151)||(32035269-32035335)
chr8 (86-160)||(44543957-44544031)
chr8 (85-158)||(968410-968483)
chr8 (85-122)||(1100581-1100618)
chr8 (85-158)||(3305143-3305216)
chr8 (85-158)||(3624628-3624700)
chr8 (85-158)||(8794301-8794373)
chr8 (85-158)||(12988476-12988548)
chr8 (85-158)||(18546317-18546390)
chr8 (85-158)||(18897214-18897286)
chr8 (129-158)||(28787495-28787524)
chr8 (85-158)||(29858004-29858077)
chr8 (86-155)||(31087214-31087283)
chr8 (85-158)||(31408077-31408150)
chr8 (86-139)||(34797904-34797957)
chr8 (114-158)||(3174789-3174833)
chr8 (85-117)||(11502613-11502645)
chr8 (85-141)||(35672480-35672536)
[»] chr6 (20 HSPs)
chr6 (85-158)||(28363985-28364058)
chr6 (85-158)||(7320758-7320830)
chr6 (85-158)||(20213089-20213162)
chr6 (85-158)||(22107112-22107185)
chr6 (85-158)||(30127448-30127521)
chr6 (85-158)||(31622946-31623019)
chr6 (114-158)||(14278095-14278139)
chr6 (86-158)||(24507492-24507564)
chr6 (100-148)||(33456623-33456671)
chr6 (81-156)||(14576492-14576567)
chr6 (88-151)||(24256780-24256843)
chr6 (99-158)||(28841462-28841521)
chr6 (85-147)||(12234462-12234524)
chr6 (85-158)||(1056640-1056713)
chr6 (85-158)||(1906541-1906614)
chr6 (85-158)||(3779387-3779460)
chr6 (85-158)||(6758377-6758450)
chr6 (85-158)||(14199902-14199975)
chr6 (85-158)||(16535232-16535305)
chr6 (86-158)||(8268686-8268758)
[»] chr5 (21 HSPs)
chr5 (85-158)||(17028219-17028292)
chr5 (85-158)||(25627105-25627177)
chr5 (85-158)||(43442244-43442317)
chr5 (87-158)||(17155870-17155941)
chr5 (85-158)||(16773855-16773928)
chr5 (85-158)||(28285300-28285373)
chr5 (85-158)||(29075829-29075902)
chr5 (85-155)||(30000167-30000237)
chr5 (85-158)||(22737130-22737203)
chr5 (85-158)||(29173538-29173611)
chr5 (92-158)||(21086762-21086828)
chr5 (80-158)||(24907537-24907615)
chr5 (85-158)||(14495760-14495833)
chr5 (85-157)||(25979219-25979291)
chr5 (85-158)||(37258321-37258394)
chr5 (85-158)||(43230729-43230802)
chr5 (130-158)||(87423-87451)
chr5 (114-158)||(14285209-14285253)
chr5 (83-123)||(16831640-16831680)
chr5 (86-134)||(17761311-17761359)
chr5 (85-125)||(17877115-17877155)
[»] scaffold0070 (1 HSPs)
scaffold0070 (85-158)||(42476-42548)
[»] scaffold0101 (1 HSPs)
scaffold0101 (89-156)||(41711-41778)
[»] scaffold0074 (1 HSPs)
scaffold0074 (85-156)||(45714-45785)
[»] scaffold0180 (1 HSPs)
scaffold0180 (85-158)||(19918-19990)
[»] scaffold0008 (1 HSPs)
scaffold0008 (85-158)||(49354-49427)
[»] scaffold0006 (3 HSPs)
scaffold0006 (85-158)||(162964-163037)
scaffold0006 (88-158)||(18347-18416)
scaffold0006 (88-156)||(222559-222626)
[»] scaffold0337 (1 HSPs)
scaffold0337 (86-158)||(1801-1873)
[»] scaffold0258 (1 HSPs)
scaffold0258 (88-158)||(15281-15351)
[»] scaffold0238 (2 HSPs)
scaffold0238 (88-154)||(19615-19681)
scaffold0238 (114-158)||(2695-2739)
[»] scaffold0172 (1 HSPs)
scaffold0172 (85-158)||(15732-15805)
[»] scaffold0118 (1 HSPs)
scaffold0118 (85-158)||(41588-41661)
[»] scaffold0126 (1 HSPs)
scaffold0126 (86-158)||(25303-25375)
[»] scaffold0065 (1 HSPs)
scaffold0065 (86-158)||(12237-12309)


Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 12448901 - 12448615
Alignment:
Q  14 caaatggatcatatattattgaaacatgaatgataaaaccaactgaaatagacacaaacactactcatatgtttttt--gaagaagttaaattaacccat 111  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||||| ||||||  ||||||| ||||||| | ||     
T  12448901 caaatggatcatatattattgaaacatgaatgataaaaccaattgtaatagacacaaatactacacatattttttttttgaagaagctaaattagctca- 12448803  T
Q  112 ctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagccaaacactactcatattattatcattaatctcttcttcatttcaatagggttt 211  Q
    |||||||| ||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12448802 ctaaattggcactaaagagaatcgaacctgagatcttgaggaggagccaaacactactcatattattatcattaatctcttcttcatttcaatagggttt 12448703  T
Q  212 tgcactttgtgtattacaaaattatttcatcacatgtgagac--tagtttatataaacgtaaatagatgagattcaacaaataactaa 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  12448702 tgcacttcgtgtattacaaaattatttcatcacatgtgagactatagtttatataaacgtaaatagatgagattcaacaaataactaa 12448615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 12448619 - 12448513
Alignment:
Q  361 actaatcaaagtgcttactatggacctccaccccagaacaagggccacaaatgtccaaatttccttgccaaaacatgtgtcctgaaacaataactcctaa 460  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  12448619 actaatcaaagtgcttactatggaccttcaccccagaacaagggccacaaatgtccaaattttcttgccaaaacatgtgtcctaaaacaataactcctaa 12448520  T
Q  461 acttgac 467  Q
    |||||||    
T  12448519 acttgac 12448513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 7949409 - 7949482
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| |||||||||||||| | |||||| |||||||||||||||||||||||    
T  7949409 ttttttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagc 7949482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 40283942 - 40284010
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    |||||||||||||||||||| |||| |||||||| ||||||  |||||||||||| |||||||||||||    
T  40283942 tttttgaagaagttaaattagcccacctaaattggcaccaagcagaatcaaaccttagaccttgaggag 40284010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 49938791 - 49938860
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| |||||||||||| |||||||| ||| |  ||||||||||||| |||||||||||||    
T  49938791 ttttttgaagaagctaaattaacccacctaaattggcactaggaagaatcaaacctaagaccttgaggag 49938860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 4249298 - 4249225
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||||||    |||||| ||||| | ||||||||||||||||||||||||||||||    
T  4249298 ttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagc 4249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 9693453 - 9693526
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| |||||||||||||||||||||||    
T  9693453 ttttttgaagaaggtaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagc 9693526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 21375898 - 21375825
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| | |||| |||||||||||||| |||||||||| | |||||||| || |||||| |||||||||||||    
T  21375898 tttttttatgaagctaaattaacccatccaaattgacactagaaagaatcgaatctgagagcttgaggaggagc 21375825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 51954235 - 51954162
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||||  | | ||||||||||||||||| ||||||||||    
T  51954235 ttttttgaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagc 51954162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 7539710 - 7539638
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||||||| |||||| || |||||||||  | | |||||| |||||||||||||||| ||||||    
T  7539710 ttttttgaagaagttaaactaacccctc-aaattgacagaagagagaatcgaacctgagaccttgagaaggagc 7539638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8030159 - 8030232
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| ||| |||||||||||||||||||    
T  8030159 ttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagc 8030232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 18525481 - 18525420
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagacc 146  Q
    |||||||||||||||||||||  |||||||||||||||||  | |||||| ||| |||||||    
T  18525481 ttttttgaagaagttaaattagtccatctaaattgacaccggagagaatcgaacatgagacc 18525420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 31826730 - 31826657
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||| | |||||||||| |||  ||||| ||| |||||||||||||||||||    
T  31826730 tttttttaagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagc 31826657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 32662875 - 32662802
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||||||||||| ||||  |||||||||||| || | |||| ||||||||||||  |||||||||    
T  32662875 tttttttaagaagttaaattagcccacttaaattgacaccgaagaaaatcgaacctgagacctcaaggaggagc 32662802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 37274414 - 37274487
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| ||||  ||||||  ||||| | |||||| ||||| |||||||||||||||||    
T  37274414 ttttttgaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagc 37274487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 20094230 - 20094175
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgaga 144  Q
    |||||||||||||||||  |||||||||||||||||   ||||||||||| |||||    
T  20094230 ttgaagaagttaaattagtccatctaaattgacaccgggaagaatcaaacatgaga 20094175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 18469611 - 18469545
Alignment:
Q  92 aagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||| | || ||||||||| |||  |||||||| ||| |||||||||||||||||||    
T  18469611 aagaagataaattagctcacctaaattgataccggaaagaatccaacatgagaccttgaggaggagc 18469545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 28635822 - 28635744
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| ||||||||||||| ||||||| |||| | |||||| ||||| | |||||| ||||| ||||||  |||||||||    
T  28635822 atattttttttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagc 28635744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 31759608 - 31759686
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| ||||||||||||| |||| ||| || |  ||||||  |||| |||||||| || ||||||||||||||||||||    
T  31759608 atatattttttgaagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagc 31759686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 5795408 - 5795437
Alignment:
Q  129 agaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||||||||||||    
T  5795408 agaatcaaacctgagaccttgaggaggagc 5795437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 13015548 - 13015475
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| || ||| |||||||||||| |||||||||||||  | |||||| ||| |||||| | ||||||||||    
T  13015548 tttttttaataagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagc 13015475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 33632091 - 33632164
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||||||| ||||||    |||||||||||| | |||||| | |||| ||||||||||||||||    
T  33632091 tttttttaagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagc 33632164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 37109306 - 37109379
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||  |||| ||||||    |||||| ||||| | |||||| |||||||||||||||||||||||    
T  37109306 ttttttgaagaaactaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagc 37109379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 49576849 - 49576922
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||| |||  ||| | |||||||||    | |||||| |||||||||||||||||||||||    
T  49576849 ttttttgaagaagttaagttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagc 49576922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 51969138 - 51969065
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||||||||||  ||||| |||||| ||||| | ||||   ||||||| |||||||||||||||    
T  51969138 tttttttaagaagttaaattagtccatccaaattggcaccagagagaaatgaacctgaaaccttgaggaggagc 51969065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 14076438 - 14076394
Alignment:
Q  95 aagttaaattaacccatctaaattgacaccaaaaagaatcaaacc 139  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  14076438 aagttaaactaacccacctaaattgacaccgaaaagaatcgaacc 14076394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 53496997 - 53496925
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||| ||||||||||||||  ||| | |||||| | ||| | ||||||||| ||||||| ||||||||||||    
T  53496997 ttttttaagaagttaaattagtccaaccaaattggctccagagagaatcaaatctgagactttgaggaggagc 53496925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 21558249 - 21558176
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||||||| |||||||| ||||| | |||||| |||||||||||||||||||||||    
T  21558249 ttttttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagc 21558176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 15137674 - 15137601
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||  ||||||| |||| | |||||||||||| | |||||| |||||||||||||||||||||||    
T  15137674 ttttttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagc 15137601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 29385698 - 29385771
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||  ||| || |||| | |||||| ||||||| ||||||||||||||||||||||||||||||    
T  29385698 ttttttgaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagc 29385771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 30579461 - 30579386
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagg 155  Q
    |||| ||||||||||||| ||||||| |||| |||||||| ||||| | | |||| ||||||||||||||||||||    
T  30579461 atattttttttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggagg 30579386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 26459365 - 26459438
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| |||||| |  |||||| ||||| | |||||| |||||||||||||||||||||||    
T  26459365 ttttttgaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagc 26459438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 41487480 - 41487411
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| ||||||| |||| |||||||| ||||   ||||||| |||||||||||||||||||    
T  41487480 ttttttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggag 41487411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 41519220 - 41519292
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| ||||||||||| || | |||| | |||||||||||||||||||||||    
T  41519220 ttttttgaagaagctaaattagcccacctaaattgaca-cagagagaagcgaacctgagaccttgaggaggagc 41519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 7721490 - 7721418
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    ||||| ||||||| |||||||  ||||| |||||||||||| | |||||| ||| ||||||||||||||||||    
T  7721490 tttttagaagaagctaaattattccatccaaattgacaccagagagaatcgaacatgagaccttgaggaggag 7721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 9183146 - 9183219
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||  ||||||| |||| | |||||||||||| | | |||| |||||||||| ||||||||||||    
T  9183146 ttttttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagc 9183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 17040967 - 17041040
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||| ||||| | |||||| |||   | |||||| |||||||||||||||||||||||    
T  17040967 ttttttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagc 17041040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 18363816 - 18363744
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| |||||| || ||||||  || | | ||||||||||||||||||||||||||||||    
T  18363816 ttttttgaagaagctaaactaacccctc-aaattggtactagagagaatcaaacctgagaccttgaggaggagc 18363744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 20335790 - 20335859
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||| |||||| ||||||||| |    |||||| |||||||||||| ||||||||||    
T  20335790 ttgaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagc 20335859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 37473735 - 37473662
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||||||| |||||||||||  |   |||||| ||||||||||||  |||||||||    
T  37473735 ttttttgaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacctcaaggaggagc 37473662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 4566406 - 4566454
Alignment:
Q  108 ccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    |||||||||||| ||||| | ||||||||||||||||||||||| ||||    
T  4566406 ccatctaaattggcaccagagagaatcaaacctgagaccttgagaagga 4566454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 26526409 - 26526338
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||| ||||||||||||||||||||| |||||||||||  | |||||| |||| ||||  ||||||||||||    
T  26526409 ttttttaagaagttaaattaacccatccaaattgacaccggagagaatc-aacccgagattttgaggaggagc 26526338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 48983688 - 48983755
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgagg 152  Q
    |||||| |||||||||||||| |||| | |||||||||| | |  ||||| |||||||||||||||||    
T  48983688 tttttttaagaagttaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagg 48983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 27445114 - 27445076
Alignment:
Q  82 atgttttttgaagaagttaaattaacccatctaaattga 120  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  27445114 atgttttttgaagaagttaaattatcccacctaaattga 27445076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 30442607 - 30442536
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||| |||||||||||| | |||||||| ||| |  ||||| ||||| |||||||||||||||||    
T  30442607 ttttttgaataagctaaattaacccacccaaattgactccaga--gaatcgaacctcagaccttgaggaggagc 30442536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 33222496 - 33222423
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatct-aaattgacaccaaaaagaatcaaacctgagaccttgagga 153  Q
    |||| ||||||||||||  |||| |||||| ||| |||||||||||| | |||||| ||||||||||||||||||    
T  33222496 atattttttttgaagaatctaaactaaccc-tctcaaattgacaccagagagaatcgaacctgagaccttgagga 33222423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 2883070 - 2882998
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||| | | |||| |||||||| ||||| | |||||  |||||||||||||||||||||||    
T  2883070 ttttttgaagaagctaagt-agcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagc 2882998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 4572256 - 4572317
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttga 150  Q
    ||||||||| ||||||| |||| | |||||||||||  | |||||| |||||||||||||||    
T  4572256 ttgaagaagataaattagcccacccaaattgacaccggagagaatcgaacctgagaccttga 4572317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 7744111 - 7744140
Alignment:
Q  129 agaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||||||||||||    
T  7744111 agaatcaaacctgagaccttgaggaggagc 7744140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 25590732 - 25590659
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| ||||   ||||||||||| || | |||| |||| ||||||| ||||||||||    
T  25590732 ttttttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagc 25590659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 27313689 - 27313762
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| | || |||||||| || || | |||||| || |||| |||||||||||||||    
T  27313689 ttttttgaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgaggaggagc 27313762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 29785256 - 29785329
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| |||| ||||||    |||||| ||||| |||||||| ||| |||||||||||||||||||    
T  29785256 tttttttaagaagctaaactaaccccctcaaattggcaccagaaagaatcgaacatgagaccttgaggaggagc 29785329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 39631965 - 39631892
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||||||    |||||| ||| | | |||||| |||||||||||||||||||||||    
T  39631965 ttttttgaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagc 39631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 43591028 - 43590955
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| || ||||| ||| |   |||||| |||||||||| ||||||||||||    
T  43591028 ttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagc 43590955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 34647596 - 34647648
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaa 137  Q
    |||||| ||||||||||||||  |||| ||||||||||| ||| |||||||||    
T  34647596 tttttttaagaagttaaattagaccatttaaattgacacaaaagagaatcaaa 34647648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 43633251 - 43633323
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    ||||||||||||| ||||||| |||||  |||||||||| | | |||||| || |||| | ||||||||||||    
T  43633251 ttttttgaagaagctaaattagcccattgaaattgacacaatagagaatctaatctgacatcttgaggaggag 43633323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 11251208 - 11251135
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||||||||||| | || |||||||||||||| | ||||||||||||||||||||||||||||||    
T  11251208 ttttttgaataagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagc 11251135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 21195631 - 21195704
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||||| |||||||||| | |  ||||| |||||||||||||||||||||||    
T  21195631 tttttttaagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagc 21195704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 35203338 - 35203411
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||||||||  ||||||||||||||| | |||| ||| |||||| ||||||| ||||    
T  35203338 ttttttgaagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgagactttgaggatgagc 35203411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 1435184 - 1435116
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| ||||||| |||| | |||||||||||| | |||||| || ||||||||||||||||    
T  1435184 ttttttgaagaagctaaattagcccacccaaattgacaccagagagaatcgaa-ctgagaccttgaggag 1435116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 11062480 - 11062412
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| |||| |||| | || |||||||||| | | ||||||||||||||||||||||||||    
T  11062480 ttttttgaagaagctaaactaactcctc-aaattgacacaagagagaatcaaacctgagaccttgaggag 11062412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 16918533 - 16918606
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||| ||||| ||| || ||||| | |||||| ||||| |||||||||||||||||    
T  16918533 ttttttgaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagc 16918606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 21303949 - 21304022
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||||||    |||||||||||| | |||||| ||||||| ||||| |||||||||    
T  21303949 ttttttgaagaagctaaattaaccccctcaaattgacaccagagagaatcgaacctgaaaccttcaggaggagc 21304022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 42327350 - 42327423
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||| | ||||||| |||| | |||||| |||| || |||||| |||||||||||||||||||||||    
T  42327350 tttttttaagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagc 42327423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 42602675 - 42602602
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||| ||||  | |||||||||||| |||||||||| ||||||    
T  42602675 ttttttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagc 42602602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 2296033 - 2295961
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    ||||||||||||| ||||||| |||||  ||||||||||| || | |||| || ||||||||| |||||||||    
T  2296033 ttttttgaagaagctaaattagcccattcaaattgacaccgaagaaaatcgaatctgagacctcgaggaggag 2295961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 25931127 - 25931067
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagac 145  Q
    ||||||||||||  ||||||||| |||| |||||||||||||| |||||| || |||||||    
T  25931127 ttttttgaagaaactaaattaactcatccaaattgacaccaaagagaatcgaatctgagac 25931067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 26545963 - 26545888
Alignment:
Q  83 tgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||| ||| || |||||||||||| ||||||||| | | || |||||||||| |||||||| ||| ||||||    
T  26545963 tgttttttaaagcagctaaattaacccacctaaattgatatcgaagagaatcaaacttgagacctcgagaaggagc 26545888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 34041546 - 34041616
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||| |||| ||||||    |||||| ||||| |  |||||||||||||||||||||||||||||    
T  34041546 tttgaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagc 34041616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 4060169 - 4060238
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| |||| ||||||    |||||||||||| | |||||| ||||||||| |||||||||    
T  4060169 ttttttgaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggag 4060238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 11127958 - 11128011
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaac 138  Q
    ||||||||||||| ||||||| | ||||||||||||||||| |  |||||||||    
T  11127958 ttttttgaagaagctaaattagcacatctaaattgacaccagagggaatcaaac 11128011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 12517709 - 12517781
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | || ||| |||||   |||||||||| |||||||||||||||||||    
T  12517709 ttttttgaagaagctaaattagcccacccaa-ttggcaccagggagaatcaaacatgagaccttgaggaggagc 12517781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 25637272 - 25637199
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||| |||| |||||||| || |  | |||| | |||||||||||| ||| ||||||    
T  25637272 ttttttgaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagc 25637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 26276476 - 26276403
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||| |  ||| ||||||||||||| |  |||| | |||||||||||||||||||||||    
T  26276476 tttttttaagaagctaaatcagtccacctaaattgacaccgacgagaaacgaacctgagaccttgaggaggagc 26276403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 29503391 - 29503319
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||  ||||  ||||||||||||    |||||| |||||||||||||||||||||||    
T  29503391 ttttttgaagaagctaaatttgcccacttaaattgacacc-gggagaatcgaacctgagaccttgaggaggagc 29503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 31573600 - 31573669
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||||||  ||| ||||||||||| | || |||||| |||||||||| |  |||||||||    
T  31573600 ttgaagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgagacatcaaggaggagc 31573669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 33582094 - 33582021
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||  ||| |||||||||||  | | |||||| ||||||||||||  |||||||||    
T  33582094 ttttttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagc 33582021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 37480196 - 37480123
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | ||||||  |||    |||||| |||||||||||||||||||||||    
T  37480196 ttttttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagc 37480123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 38854417 - 38854486
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| ||||||| |||| |||||||||| ||    | |||| |||||||||||||||||||    
T  38854417 ttttttgaagaagctaaattagcccacctaaattgaccccggtgataatcgaacctgagaccttgaggag 38854486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 38856117 - 38856186
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| ||||||| |||||| |||| ||||||  | | |||| ||| |||||||||||||||    
T  38856117 ttttttgaagaagctaaattagcccatcgaaatggacaccgtagataatcgaacatgagaccttgaggag 38856186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 42472358 - 42472395
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgaca 122  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  42472358 ttttttgaagaagttaaattaactcatccaaattgaca 42472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 2311845 - 2311773
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    |||||||||||||  |||||| ||||   ||||||||||| || | |||| |||||||||||| |||||||||    
T  2311845 ttttttgaagaagccaaattagcccactcaaattgacaccgaagaaaatcgaacctgagacctcgaggaggag 2311773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 4262256 - 4262330
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| ||||||||||||   ||||||||| | |||||||||| ||  | |||||| |||||||||||||||||||||||    
T  4262256 atattttttttgaagaa---aaattaacctacctaaattgac-ccggagagaatcgaacctgagaccttgaggaggagc 4262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 45026835 - 45026791
Alignment:
Q  114 aaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||| | |||||||||| |||||||||||||||||||    
T  45026835 aaattggcaccagagagaatcaaacatgagaccttgaggaggagc 45026791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 160313 - 160386
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||  ||||||||| |||||| |||||||||| || ||||||||||||||||||||    
T  160313 ttttttgaagaagctaaattagtccatctaaactgacacaaaaaagaatcgaatctgagaccttgaggaggagc 160386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 44069877 - 44069806
Alignment:
Q  87 ttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||| |||| || |||| |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  44069877 ttttgaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagc 44069806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 27093317 - 27093389
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| |||||| || |||||| ||||| | ||||||||||||||||||||||||||||||    
T  27093317 ttttttgaagaagataaactaacccttc-aaattggcaccagagagaatcaaacctgagaccttgaggaggagc 27093389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 52769938 - 52770011
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| |||||||||||| ||| |||||| ||||||||||||  |||||||||    
T  52769938 ttttttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagc 52770011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 33278975 - 33279034
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgaga 144  Q
    ||||||||||||| ||||||| ||||||||||||||||||  | ||||||||||||||||    
T  33278975 ttttttgaagaagctaaattatcccatctaaattgacaccggagagaatcaaacctgaga 33279034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 4222262 - 4222189
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||||||| |||| || |||||||||||||| | |||||| ||||| |||| ||||||||||||    
T  4222262 tttttttaagaagttaaactaactcacctaaattgacaccagagagaatcgaacctaagactttgaggaggagc 4222189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 30311427 - 30311354
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||||||    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  30311427 ttttttgaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagc 30311354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 54990823 - 54990750
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| |||||||| || | |  |||||| |||||||||||||||||||||||    
T  54990823 ttttttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagc 54990750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 24353336 - 24353407
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||| ||||||||||||||| ||||||||||||  |||  |||  |||||||||||||||||||||||    
T  24353336 tttttttaaggagttaaattaacccacctaaattgacactgaaa--aattgaacctgagaccttgaggaggagc 24353407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8075082 - 8075155
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| ||||||| |||||||||||||||    
T  8075082 ttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagc 8075155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 8170793 - 8170720
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| |||||||| |||| | |||||||||||| |   |||| |||||||||||||||| ||||||    
T  8170793 ttttttgaagaatttaaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagc 8170720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8853754 - 8853827
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||||||||||||||| | |||||| ||||||  || ||| ||| ||||||||  |||||||||    
T  8853754 ttttttgaagaagttaaattaacccacccaaattggcaccaaggaggatcgaacatgagacctcaaggaggagc 8853827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 11642166 - 11642235
Alignment:
Q  87 ttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    ||||||||||| |||| ||||||   ||||||||||| ||| | |||| |||||||||||||||||||||    
T  11642166 ttttgaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggagga 11642235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 13808840 - 13808913
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||| ||||| |||||||||  | | |||||  |||||||||||| ||||||||||    
T  13808840 ttttttgaagaagctaaattaatccatccaaattgacattagagagaattgaacctgagacctagaggaggagc 13808913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 19154752 - 19154679
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||  |||| ||||||| | ||||||||| |||| |||||| ||||||||||||| |||||||||    
T  19154752 tttttttaagaaactaaactaacccacccaaattgacatcaaagagaatcgaacctgagacctttaggaggagc 19154679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 29186563 - 29186498
Alignment:
Q  92 aagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    ||||||||||||||  ||||| |||||||||| ||| |||||| ||| || |||||||||||||||    
T  29186563 aagaagttaaattagtccatccaaattgacactaaagagaatcgaacatgtgaccttgaggaggag 29186498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 33899735 - 33899662
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| || ||| ||||||| | || | |||||||||||||| |||||| |||||||||||| ||||||||||    
T  33899735 tttttttaataagctaaattagcacacccaaattgacaccaaagagaatcgaacctgagacctagaggaggagc 33899662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 37788421 - 37788493
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||||||| || |||||| ||| | | |||||| |||||||||||||||||||||||    
T  37788421 tttttttaagaagctaaattaacccctc-aaattggcactagagagaatcgaacctgagaccttgaggaggagc 37788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 49452993 - 49452921
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||| |||||| ||||||||| | | | | ||  |||||||||||||||||||||||    
T  49452993 ttttttgaagaagttaaattagcccatccaaattgaca-ctagagggattgaacctgagaccttgaggaggagc 49452921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 14186746 - 14186695
Alignment:
Q  107 cccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| |||||||||||||  | |||||| |||||||||||||||||||||||    
T  14186746 cccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagc 14186695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 32651403 - 32651466
Alignment:
Q  95 aagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||| || ||||||||||||||||| | | |||||| || |||||| |||||||||||||    
T  32651403 aagttaaactagcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagc 32651466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 2514889 - 2514927
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaatt 118  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  2514889 atatttttttttaagaagttaaattaacccatctaaatt 2514927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 10445089 - 10445167
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| ||||||||||||| ||||||| ||||   |||||  ||||| | |||||| |||||||||||| ||||||||||    
T  10445089 atattttttttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagc 10445167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 2667983 - 2667910
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| || |||| |||||||||||| | | | |||| |||||||||||| ||||| ||||    
T  2667983 ttttttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagc 2667910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 14339731 - 14339658
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| || ||||| ||| |   |||||| |||||||||| ||||||||||||    
T  14339731 ttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagc 14339658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 17035107 - 17035034
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||||||||||  ||| | ||||||| ||| |  |||||| |||||||||||||||||| ||||    
T  17035107 tttttttaagaagttaaattagtccacccaaattgataccgaggagaatcgaacctgagaccttgaggatgagc 17035034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 17108897 - 17108926
Alignment:
Q  129 agaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||||||||||||    
T  17108897 agaatcaaacctgagaccttgaggaggagc 17108926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 46518749 - 46518676
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||||||    |||||| || || | |||||||||||||| |||||||||||||||    
T  46518749 ttttttgaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagc 46518676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 46862636 - 46862599
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgaca 122  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  46862636 ttttttgaagaagttaaactaacccacctaaattgaca 46862599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 51903833 - 51903906
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| ||||   |||||||||||  | |||||| |||||||||||  ||||||||||    
T  51903833 ttttttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagc 51903906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 15786276 - 15786348
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| |||||||| |||||| || |||||||||||||| |||||| |||||||||||||||||||||||    
T  15786276 ttttttgaaaaagttaaactaacccctc-aaattgacaccaaagagaatcgaacctgagaccttgaggaggagc 15786348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 6650716 - 6650643
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||| ||| |||||||||||||| | |||||| |||||||||| ||||||||||||    
T  6650716 ttttttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagc 6650643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 10526941 - 10526871
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||| |||||||||||| | |||||||| ||| | |||||| || ||||||||||||||||||||    
T  10526941 tttgaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagc 10526871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 6122915 - 6122842
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| |||||||||||||||||||||||    
T  6122915 ttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagc 6122842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 52336729 - 52336802
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| |||||||| |||||| |||||||||||| | | |||| ||||||||| ||| |||||||||    
T  52336729 ttttttgaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagc 52336802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 48391289 - 48391360
Alignment:
Q  87 ttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||| |||||||||||||| ||||| |||||| || ||||| || |||| ||||||| |||||||    
T  48391289 ttttgaagaagctaaattaacccatccaaattaacaccagaaggaatcgaatctgaaaccttgatgaggagc 48391360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 29753770 - 29753700
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagg 155  Q
    ||||||||||||| |||| ||||||   ||||||| ||||| | |||||| ||||||||||||||||||||    
T  29753770 ttttttgaagaagctaaactaaccctcttaaattggcaccagagagaatcgaacctgagaccttgaggagg 29753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 33700735 - 33700801
Alignment:
Q  92 aagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||| ||||||   ||||||| ||||| | |||||| |||||||||||||||||||||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagc 33700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 2799983 - 2799910
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||||||    |||||| ||||| | |||||| |||||||||||||||||||||||    
T  2799983 ttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagc 2799910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 4566668 - 4566596
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| |||||| | |||||||||| || | |||||| ||||||||||| |||||||||||    
T  4566668 ttttttgaagaagctaaactaacccct-taaattgacatcagagagaatcgaacctgagaccctgaggaggagc 4566596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 12587390 - 12587318
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| |||||||| ||||  | |||||| |||||||||||| ||||||||||    
T  12587390 ttttttgaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagc 12587318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 17745216 - 17745284
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| |||||||||| | |||||||||||||| | |||||| ||| |||||||| ||||||||||    
T  17745216 ttgaagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagc 17745284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 21547435 - 21547508
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||||||| || |||| |||||||| || || | |||||| ||||||| |||| ||||||||||    
T  21547435 ttttttgaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagc 21547508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 25297893 - 25297820
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| |||||||||| ||    |||||||||||| |||||| ||||||||||    
T  25297893 ttttttgaagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagc 25297820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 44370835 - 44370908
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||| | || ||||||||| |||| | |||||||||  |||||||| || |||||||    
T  44370835 ttttttgaagaagttaaattagctcacctaaattgaaaccagagagaatcaaagttgagacctcgaagaggagc 44370908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 44961886 - 44961813
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||| | |||||||||| | | |||||| ||||||||||| |||||||||||    
T  44961886 tttttttaagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagc 44961813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 6948032 - 6948071
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacacc 124  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  6948032 tttttttaagaagttaaattaactcatctaaattgacacc 6948071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 35282478 - 35282406
Alignment:
Q  84 gttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| |  |||  ||||| ||||||||| |||||||    
T  35282478 gtttttttaagaagttaaattagaccatctaaattgacaccaaga--aattgaacctaagaccttgatgaggagc 35282406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 46496565 - 46496526
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacacc 124  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  46496565 ttttttgaagaaattaagttaacccatctaaattgacacc 46496526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 952632 - 952559
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||| |||| |||||||||||| ||||||||||| |    |||||| |||||||||| ||||||| ||||    
T  952632 ttttttgacgaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagc 952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 1094646 - 1094573
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||| |||| |||||||| ||||  | |||||| ||  |||||||| | ||||||||    
T  1094646 ttttttgaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagc 1094573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 1600247 - 1600320
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||| |||  ||||| |||||||||||| | |||||| ||||||| || || |||||||||    
T  1600247 ttttttgaagaagctaagttagtccatccaaattgacaccagagagaatcgaacctgaaactttaaggaggagc 1600320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 4280410 - 4280475
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||||||| | || | |||||  |||| || |||||||||||||||||||| |||||    
T  4280410 ttgaagaagttaaattagctcacccaaattagcaccgaagagaatcaaacctgagaccttcaggag 4280475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8177137 - 8177210
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| ||||||    |||||| ||||| | |||||| ||||||| |||||||||||||||    
T  8177137 ttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagc 8177210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 12036408 - 12036335
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||||||||||| ||||| |||||||  |||| || ||||||||||   ||| ||||||||||||    
T  12036408 tttttttaagaagttaaattagcccatttaaattggtaccagaaggaatcaaaccaacgactttgaggaggagc 12036335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 13578672 - 13578745
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||||||| ||| ||||||||||||| |||| || |||||| ||||| |||  || |||||||||    
T  13578672 tttttttaagaagttaagttagcccatctaaattggcaccgaagagaatcgaacctcagattttaaggaggagc 13578745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 45266955 - 45266882
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||| |||| || |||||| |||||| ||||    |||||| |||||||||||||||||||||||    
T  45266955 ttttttgaataagctaaactagcccatccaaattggcaccggggagaatcgaacctgagaccttgaggaggagc 45266882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 158
Target Start/End: Complemental strand, 51281428 - 51281399
Alignment:
Q  129 agaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||||||||||||    
T  51281428 agaatcaaacctgagaccttgaggaggagc 51281399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 1247234 - 1247162
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    |||||| |||||| |||| |||||| |  ||||||  |||| | |||||| ||||||||||||||||||||||    
T  1247234 tttttttaagaagctaaaataaccccttcaaattggtaccagagagaatcgaacctgagaccttgaggaggag 1247162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 11063678 - 11063606
Alignment:
Q  84 gttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    |||||||||||||| |||| |||||| |  |||||| ||| | | |||||| ||||| |||||||||||||||    
T  11063678 gttttttgaagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggagga 11063606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 15904732 - 15904660
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    |||||||||||   |||||||||||||| ||||||||| || | |||||| || ||||||  |||||||||||    
T  15904732 ttttttgaagagactaaattaacccatccaaattgacatcagagagaatcgaatctgagattttgaggaggag 15904660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 16893515 - 16893443
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    ||||||||||||| ||||||| ||||   |||||||||||  | | |||| |||||||||||| |||||||||    
T  16893515 ttttttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggag 16893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 40810588 - 40810517
Alignment:
Q  85 ttttttgaagaagttaaattaacccatct-aaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    ||||||||||||| |||| |||||| ||| |||||| ||||| | |||||| ||||||||||||||| |||||    
T  40810588 ttttttgaagaagctaaactaaccc-tctcaaattggcaccagagagaatcgaacctgagaccttgaagagga 40810517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 43800157 - 43800197
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacacca 125  Q
    |||||| ||||||||||||||||||| | ||||||||||||    
T  43800157 tttttttaagaagttaaattaacccacccaaattgacacca 43800197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 48383922 - 48383982
Alignment:
Q  87 ttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagacct 147  Q
    |||||||||||||||| |||||||| |||||||| ||    ||||||| ||||||||||||    
T  48383922 ttttgaagaagttaaactaacccatttaaattgatacggggaagaatcgaacctgagacct 48383982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 42621 - 42690
Alignment:
Q  87 ttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    ||||||||||||||||||| |||| |||||||||||||| | |||||| ||| ||||| |||||||||||    
T  42621 ttttgaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgaggagga 42690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 11928686 - 11928759
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||||||||||||||||| ||||||||| |   ||||||| |||||||||||| ||||||||||    
T  11928686 tttttttaagaagttaaattaacccatccaaattgacatcggtaagaatcgaacctgagacctcgaggaggagc 11928759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 33017334 - 33017262
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||||||| |||||| || |||||| ||||| | |||||| |||||||||||||||||||||||    
T  33017334 ttttttgaagaagttaaactaacccctc-aaattggcaccagagagaatcgaacctgagaccttgaggaggagc 33017262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 44780069 - 44780142
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  |||||||||||||||||||||||||||||    
T  44780069 ttttttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagc 44780142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 6536635 - 6536568
Alignment:
Q  91 gaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||| |||||||||||| |||||||| ||||| | |||||  |||||||||||||||||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagc 6536568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 11819897 - 11819824
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| |||||||||||||||||||||||    
T  11819897 ttttttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagc 11819824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 13129789 - 13129716
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||| |||||||| ||||| |||||| ||||| | |||||| ||||||| |||||||||||||||    
T  13129789 ttttttgaataagctaaattaatccatccaaattggcaccagagagaatcgaacctgaaaccttgaggaggagc 13129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 33727828 - 33727901
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||||| |||||||||| | |  ||||| |||||||||||||||||||||||    
T  33727828 tttttttaagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagc 33727901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 23361618 - 23361677
Alignment:
Q  99 taaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||| |||| |||||||||||||| | |||||  |||||||||||||||||||||||    
T  23361618 taaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagc 23361677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 43594273 - 43594344
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    |||||| |||||  ||||||| |||||| |||||||||| | | |||||| |||||||||||||||||||||    
T  43594273 tttttttaagaaactaaattagcccatccaaattgacactagagagaatcgaacctgagaccttgaggagga 43594344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 18540419 - 18540350
Alignment:
Q  85 ttttttgaagaagttaaattaacccatct-aaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    ||||||||||||| ||||||||||| ||| |||||| ||||| | |||||| |||||||||||||||||||    
T  18540419 ttttttgaagaagctaaattaaccc-tctcaaattggcaccagagagaatcgaacctgagaccttgaggag 18540350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 36034471 - 36034541
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttga 150  Q
    |||| |||||| |||||| | ||||| |||| |||||||||||||| | |||||||||| |||||||||||    
T  36034471 atatatttttttaagaagcttaattagcccacctaaattgacaccagagagaatcaaacttgagaccttga 36034541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 11793476 - 11793549
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| || |||| | |||||| ||||   ||||||||||||| |||||||||||||||||    
T  11793476 ttttttgaagaagctaaactagcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagc 11793549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 16843750 - 16843822
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||| | ||||||||||||||||||  | |||||| ||||||||| |||| ||||||||    
T  16843750 ttttttgaagaagctaaat-agcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagc 16843822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 16852461 - 16852388
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| || |||| |||||||| ||| ||  |||||| |||||||||||| ||||||||||    
T  16852461 ttttttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagc 16852388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 27750851 - 27750778
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| |||||||  ||||| |||||||||| | |  ||||| |||||||||||||||||||||||    
T  27750851 tttttttaagaagctaaattagtccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagc 27750778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28783181 - 28783108
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||| |||| |  |||||| ||| |||||||||||||||||||    
T  28783181 ttttttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagc 28783108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 35583720 - 35583647
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||||  |||| |||||||||||| | || ||| | |||||||||| ||||||||||    
T  35583720 ttttttgaagaagctaaattaattcatcaaaattgacaccagagagtatcgatcctgagacctcgaggaggagc 35583647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 35690047 - 35690092
Alignment:
Q  113 taaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||    
T  35690047 taaattgacaccagagagaatcgaacctgagaccttgaggaggagc 35690092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 31088794 - 31088726
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgagga 153  Q
    ||||||||||||||||||||| || | ||||||||  | || | ||||||||||||||||||| |||||    
T  31088794 ttttttgaagaagttaaattagcctacctaaattggtatcagagagaatcaaacctgagacctcgagga 31088726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 44595810 - 44595878
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgagga 153  Q
    |||||| |||||| |||||||  |||||||||||||||| ||| |||||| ||||| |||| |||||||    
T  44595810 tttttttaagaagctaaattagtccatctaaattgacactaaagagaatcgaacctaagacgttgagga 44595878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 19703452 - 19703515
Alignment:
Q  95 aagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||| |||| || ||||||||| |   |||||| |||||||||||||||||||||||    
T  19703452 aagttaaattagcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagc 19703515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 27979278 - 27979207
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    ||||||||||||||||||||| |||||| |||||||||| | | | |||| ||| | |||| ||||||||||    
T  27979278 ttttttgaagaagttaaattagcccatccaaattgacactagagataatcgaacttaagactttgaggagga 27979207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 28036547 - 28036476
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    ||||||||||||||||||||| |||||| |||||||||| | | | |||| ||| | |||| ||||||||||    
T  28036547 ttttttgaagaagttaaattagcccatccaaattgacactagagataatcgaacttaagactttgaggagga 28036476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 11942574 - 11942536
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacac 123  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  11942574 tttttttaagaagttaaattaacccatccaaattgacac 11942536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 14701379 - 14701445
Alignment:
Q  92 aagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||| | |||| |||||||||||||| |||||  || ||||||| ||||| ||||||    
T  14701379 aagaagttaaattagctcatccaaattgacaccaaagagaattgaatctgagactttgagaaggagc 14701445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 32035269 - 32035335
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgag 151  Q
    |||||| ||||||||||||||||||||  ||||||| ||| |  ||||||||||  |||||||||||    
T  32035269 tttttttaagaagttaaattaacccattgaaattgagaccgatgagaatcaaacaagagaccttgag 32035335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 44543957 - 44544031
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagcca 160  Q
    |||||||||||| |||| ||  ||||| ||||||||| |||| |||||| ||||||||||||  | |||||||||    
T  44543957 tttttgaagaagataaactagtccatccaaattgacatcaaagagaatcgaacctgagacctcaaagaggagcca 44544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 968483 - 968410
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||| |||||||| || |  | |||||| |||||||||||| ||||||||||    
T  968483 tttttttaagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagc 968410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 1100618 - 1100581
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgaca 122  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  1100618 ttttttgaagaagctaaattagcccatctaaattgaca 1100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 3305143 - 3305216
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||| ||||| ||||||| |||| |||||||| ||||| | | |||| ||  |||||||||||||||||||    
T  3305143 ttttttgcagaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagc 3305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 3624700 - 3624628
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||| ||||||| |||| |||||||||| ||  | |||||| ||||||||||||||| |||||||    
T  3624700 ttttttgaaaaagctaaattagcccacctaaattgac-ccggagagaatcgaacctgagaccttgaagaggagc 3624628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8794301 - 8794373
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| |||||||| ||||||||||| | |||||||  |||| | |||||| ||||||||||| |||||||||||    
T  8794301 ttttgtgaagaagctaaattaacccct-taaattggtaccagagagaatcgaacctgagaccctgaggaggagc 8794373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 12988548 - 12988476
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| |||||| || |||||| ||||| | || ||| ||||||| |||||||||||||||    
T  12988548 ttttttgaagaagctaaactaacccctc-aaattggcaccagagaggatcgaacctgaaaccttgaggaggagc 12988476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 18546317 - 18546390
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| | || |||||||||| ||    |||||| |||||||||||| ||||||||||    
T  18546317 ttttttgaagaagctaaattatctcacctaaattgacgccggtgagaatcgaacctgagacctcgaggaggagc 18546390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 18897286 - 18897214
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||| | |||| |||||||| |||||  ||||||| ||| |||||||||||||||||||    
T  18897286 tttttttaagaagctaaat-atcccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagc 18897214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 28787495 - 28787524
Alignment:
Q  129 agaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||||||||||||    
T  28787495 agaatcaaacctgagaccttgaggaggagc 28787524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 29858004 - 29858077
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||| ||||||| |||| |||||||| |||| |   ||||| |||||||||||| ||||||||||    
T  29858004 ttttttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagc 29858077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 31087214 - 31087283
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagg 155  Q
    ||||| |||||||||||||| || || ||||||||||||  | | |||| |||||||||||| |||||||    
T  31087214 ttttttaagaagttaaattagcctatttaaattgacaccggagataatcgaacctgagacctcgaggagg 31087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 31408077 - 31408150
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| |||||||||||   ||||||||||  | | |||||| ||||||| |||||||||||||||    
T  31408077 tttttttaagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagc 31408150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 34797957 - 34797904
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacc 139  Q
    |||||||||||||||||||| |  ||| ||||||| |||| |||||||||||||    
T  34797957 tttttgaagaagttaaattagcttatccaaattgataccagaaagaatcaaacc 34797904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 3174789 - 3174833
Alignment:
Q  114 aaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| | |||||| |||||||||||||||||| ||||    
T  3174789 aaattgacaccagagagaatcgaacctgagaccttgaggatgagc 3174833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 11502645 - 11502613
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaat 117  Q
    |||||||||||||||||||||||||| ||||||    
T  11502645 ttttttgaagaagttaaattaacccacctaaat 11502613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 35672480 - 35672536
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctg 141  Q
    ||||||||||||| |||||||  ||||| |||||||||||  | |||||||||||||    
T  35672480 ttttttgaagaagctaaattagtccatccaaattgacaccggagagaatcaaacctg 35672536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28364058 - 28363985
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| |||||||| |||||| |||||||||||| | | |||| || ||||||||||||||||||||    
T  28364058 ttttttgaagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagc 28363985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 7320758 - 7320830
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||||||||  |||||| ||||| | ||||||  |||||||||||| |||||||||    
T  7320758 ttttttgaagaagctaaattaacccattcaaattggcaccatagagaatc-gacctgagaccttcaggaggagc 7320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 20213162 - 20213089
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| |||||||||| ||||||||||||    
T  20213162 ttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagc 20213089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 22107185 - 22107112
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |  ||||| |||||||||| ||||||||||||    
T  22107185 ttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagc 22107112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 30127521 - 30127448
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||| |||| |||||||||| | |||||||| ||||  |||||||| |||||||||||| || |||||||    
T  30127521 ttttttgaggaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagc 30127448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 31622946 - 31623019
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||||  |  || ||||||||||||||| ||||||||||    
T  31622946 ttttttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagc 31623019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 14278095 - 14278139
Alignment:
Q  114 aaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| | |||||||||||||||||||| |||||||||    
T  14278095 aaattgacaccagagagaatcaaacctgagaccttaaggaggagc 14278139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 24507492 - 24507564
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||| ||||||| ||||||||| |||  | |||||  ||||  |||||||||||||||||    
T  24507492 tttttgaagaagttaaactaacccacctaaattgataccggagagaattgaaccctagaccttgaggaggagc 24507564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 33456623 - 33456671
Alignment:
Q  100 aaattaacccatctaaattgacaccaaaaagaatcaaacctgagacctt 148  Q
    ||||||||||| |||||||||||||| |||||||| ||| |||||||||    
T  33456623 aaattaacccacctaaattgacaccagaaagaatcgaacatgagacctt 33456671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 14576492 - 14576567
Alignment:
Q  81 tatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    |||||||||| ||||||||||| |||||||||  |||||  |||| || |||||||| |||||| ||| |||||||    
T  14576492 tatgtttttttaagaagttaaactaacccatcccaattggtaccagaacgaatcaaatctgagatcttaaggagga 14576567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 24256780 - 24256843
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgag 151  Q
    |||||||||| |||| ||||| | |||||||||||||| | |||||| ||| ||||||||||||    
T  24256780 tttgaagaagctaaactaacctacctaaattgacaccagagagaatcgaacttgagaccttgag 24256843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 28841521 - 28841462
Alignment:
Q  99 taaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||| || |||||||||||||||  | |||||| ||| |||||||||||||||||||    
T  28841521 taaattagccaatctaaattgacaccggagagaatcgaacttgagaccttgaggaggagc 28841462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 12234462 - 12234524
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagacct 147  Q
    |||||| |||||| ||||||| |||||||||||||||||   | |||||| ||||||||||||    
T  12234462 tttttttaagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacct 12234524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 1056640 - 1056713
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||||||| |||| ||| ||||| | |||||| ||| | | |||||||||| ||||    
T  1056640 ttttttgaagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagc 1056713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 1906614 - 1906541
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||||||||||| |  ||| |||||  |||  ||||||||| ||| |||||||||||||||||||    
T  1906614 tttttttaagaagttaaattagctaatccaaattagcactgaaaagaatcgaacttgagaccttgaggaggagc 1906541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 3779460 - 3779387
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||||| || ||| ||||||||| || |  ||||  || ||||||||||||| ||||||    
T  3779460 ttttttgaagaagttaaattatcctatcaaaattgacatcagagggaattgaatctgagaccttgagaaggagc 3779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 6758377 - 6758450
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||  |||| |||||||||||||| | |||||| | | |||||||| |||| |||||    
T  6758377 ttttttgaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagc 6758450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 14199902 - 14199975
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| |||||||  ||| | |||||||||| | || ||||| || ||||||||||||||||||||    
T  14199902 tttttttaagaagctaaattagtccacccaaattgacactagaaggaatcgaatctgagaccttgaggaggagc 14199975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 16535305 - 16535232
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| ||||||||||| ||| |||||| ||| | | |||||| ||||||| || || |||||||||    
T  16535305 ttttttgaagaaattaaattaaccaatcgaaattggcactacagagaatcgaacctgaaacttttaggaggagc 16535232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 8268758 - 8268686
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||| |||||||||||||||| |||| ||||| |||| | | |||||| ||| || ||| ||||||||||||    
T  8268758 ttttttaagaagttaaattaactcatccaaattcacactagatagaatcgaacatgtgactttgaggaggagc 8268686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 17028219 - 17028292
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||| ||||||| ||||||| |||| |||||||||||| | |  |||||||||||||||||||||||||||||    
T  17028219 tttttagaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagc 17028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 25627177 - 25627105
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||| |||||| || |||||||||||| | |||||| |||||||||||||||||||||||    
T  25627177 ttttttgaagaagctaaactaacccctc-aaattgacaccagagagaatcgaacctgagaccttgaggaggagc 25627105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 43442317 - 43442244
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||  ||||||| |||||| ||||||||| || | |||||| |||||||||||||||||||||||    
T  43442317 ttttttgaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagc 43442244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 17155941 - 17155870
Alignment:
Q  87 ttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||||| ||||   |||||| || || | ||||||||||||||||||||||||||||||    
T  17155941 ttttgaagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagaccttgaggaggagc 17155870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 16773928 - 16773855
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| |||||||| || || | |||||| |||||||||||| ||||||||||    
T  16773928 ttttttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagc 16773855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28285373 - 28285300
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| |||| | |||||||||| | |||||||| |||| || |||||||||||||||    
T  28285373 ttttttgaagaagctaaattagcccacccaaattgacactagaaagaatcgaacccgataccttgaggaggagc 28285300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 29075902 - 29075829
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||| ||||||||||||| ||||| | |||||| ||| ||||| || ||||||||||    
T  29075902 ttttttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagc 29075829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 30000237 - 30000167
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagg 155  Q
    ||||||||||||||||||||||||||  ||||||| || || | ||| || |||||||||||| |||||||    
T  30000237 ttttttgaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggagg 30000167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 22737203 - 22737130
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| |||||||||||| ||||||||| | || |  ||||| |||||||||| ||| ||||||||    
T  22737203 ttttttgaagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagc 22737130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 29173611 - 29173538
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||| |||||||||||||| | | |||| ||||||| |||| ||||||||||    
T  29173611 tttttttaagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagc 29173538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 21086828 - 21086762
Alignment:
Q  92 aagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||   ||||||||||||||||| | | |||| || |||||| |||||||||||||    
T  21086828 aagaagttaaattaggtcatctaaattgacaccagagataatcgaatctgagatcttgaggaggagc 21086762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 24907615 - 24907537
Alignment:
Q  80 atatgttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||| ||||||||| ||| ||||||| |||| |||||||| || |||  | |||| ||||||||| |||||||||||||    
T  24907615 atattttttttgaataagctaaattagcccacctaaattggcatcaaggataatcgaacctgagaacttgaggaggagc 24907537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 14495760 - 14495833
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||| ||||||| |||| || ||||||||||||| || |  | ||||||||| ||||||||| ||||||||||    
T  14495760 tttttcgaagaagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagc 14495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 25979291 - 25979219
Alignment:
Q  85 ttttttgaagaagttaaattaaccc-atctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggag 157  Q
    |||||| |||||| ||||||||||| ||| |||||||||  | | |||||| ||||||||||||||||||||||    
T  25979291 tttttttaagaagctaaattaaccccatc-aaattgacataagagagaatcgaacctgagaccttgaggaggag 25979219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 37258321 - 37258394
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| |||| ||||||    |||||||||||| | |||||| ||||||| |||||||||||||||    
T  37258321 tttttttaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagc 37258394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 43230729 - 43230802
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||||||||| |||| ||||||||||||||| | | |||||  || |||||| ||| |||||||||    
T  43230729 tttttttaagaagttaaactaactcatctaaattgacacaagagagaattgaatctgagatcttaaggaggagc 43230802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 87423 - 87451
Alignment:
Q  130 gaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||||||||||||||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagc 87451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 14285253 - 14285209
Alignment:
Q  114 aaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||    
T  14285253 aaattggcaccagagagaatcgaacctgagaccttgaggaggagc 14285209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 16831680 - 16831640
Alignment:
Q  83 tgttttttgaagaagttaaattaacccatctaaattgacac 123  Q
    ||||| |||||||| ||||||||||||||| ||||||||||    
T  16831680 tgtttgttgaagaaattaaattaacccatcaaaattgacac 16831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 17761311 - 17761359
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatc 134  Q
    |||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  17761311 tttttgaaaaagctaaattaacccatctaaattggcaccgaagagaatc 17761359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 17877115 - 17877155
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacacca 125  Q
    |||||| |||||||||||||| |||| ||||||||||||||    
T  17877115 tttttttaagaagttaaattagcccacctaaattgacacca 17877155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 42476 - 42548
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||| ||||||||||| | ||||||| ||||||| |||||| ||||||||||  |||||||||||    
T  42476 ttttttgaagaagctaaattaacccct-taaattggcaccaaagagaatcgaacctgagactctgaggaggagc 42548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 41711 - 41778
Alignment:
Q  89 ttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    ||||| |||||||||||  | |||||||||||||| ||||| ||||| |||||||| |||||||||||    
T  41711 ttgaataagttaaattagtcaatctaaattgacacaaaaaataatcacacctgagatcttgaggagga 41778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 45714 - 45785
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    |||||| ||||||||||| ||||||| |||||||||||||| | |||||| ||| ||||||||  |||||||    
T  45714 tttttttaagaagttaaactaacccacctaaattgacaccagagagaatcgaacatgagacctcaaggagga 45785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 19918 - 19990
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||| ||| |||| |||||| || ||||| |||||| | |||||| |||||||||||||||||||||||    
T  19918 ttttttgaaaaagctaaactaacccctc-aaattaacaccagagagaatcgaacctgagaccttgaggaggagc 19990  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 49427 - 49354
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||||||||||||||||  ||||||||||||  | |||||| ||||||| |||| || |||||||    
T  49427 tttttttaagaagttaaattaacccacttaaattgacaccggagagaatcgaacctgatacctcgaagaggagc 49354  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 162964 - 163037
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||| |||  |||||||||||||||||  | |||||| ||||| |||||||  ||||||||    
T  162964 ttttttgaagaagttaagttagtccatctaaattgacaccggagagaatcgaacctcagaccttatggaggagc 163037  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 18416 - 18347
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||| ||||||| ||  || |||||| ||||| | |||||||||||||| |||||||||||||||    
T  18416 tttgaagaagctaaattagccactc-aaattggcaccagagagaatcaaacctgaaaccttgaggaggagc 18347  T

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Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 222626 - 222559
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggagga 156  Q
    |||||||||| ||||||| ||  || ||||||  |||||| |||||||||||||| |||||||||||||    
T  222626 tttgaagaagctaaattagccactc-aaattggtaccaaagagaatcaaacctgaaaccttgaggagga 222559  T

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Target: scaffold0337 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 1873 - 1801
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||||||||| ||||||| ||||||||| |||  | |||||  ||||  |||||||||||||||||    
T  1873 tttttgaagaagttaaactaacccacctaaattgataccggagagaattgaaccctagaccttgaggaggagc 1801  T

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Target: scaffold0258 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 15281 - 15351
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||| ||||||| |||| |||||||| || |  | |||||| |||||||||||| ||||||||||    
T  15281 tttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagc 15351  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 19615 - 19681
Alignment:
Q  88 tttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggag 154  Q
    |||||||| | |||||||||||||| ||| || ||| | |||||||||||| ||| |||||||||||    
T  19615 tttgaagaggctaaattaacccatccaaaatggcactagaaagaatcaaacttgaaaccttgaggag 19681  T

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Target: scaffold0238; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 2695 - 2739
Alignment:
Q  114 aaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||    
T  2695 aaattggcaccagagagaatcgaacctgagaccttgaggaggagc 2739  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 15732 - 15805
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||| |||||| ||||||| |||| | |||||| ||||    |||||||||| |||||||||||||||||||    
T  15732 tttttttaagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagc 15805  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 41588 - 41661
Alignment:
Q  85 ttttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    ||||||||||| | ||||||| |||| | ||||||||| || | |||||  |||||||||||| ||||||||||    
T  41588 ttttttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagc 41661  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 25303 - 25375
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| |||| || | |||  |||||||||||| | | |||| |||||||||||||||| ||||||    
T  25303 tttttgaagaagctaaaatagctcattcaaattgacaccagagataatcgaacctgagaccttgagaaggagc 25375  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 12309 - 12237
Alignment:
Q  86 tttttgaagaagttaaattaacccatctaaattgacaccaaaaagaatcaaacctgagaccttgaggaggagc 158  Q
    |||||||||||| |||| ||| ||| ||||||||| |||| | |||||  ||| | |||||||||||||||||    
T  12309 tttttgaagaagctaaactaatccacctaaattgataccagagagaatttaactttagaccttgaggaggagc 12237  T

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