View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9009_low_30 (Length: 300)

Name: NF9009_low_30
Description: NF9009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9009_low_30
NF9009_low_30
[»] chr3 (64 HSPs)
chr3 (1-286)||(16384361-16384646)
chr3 (3-286)||(16831519-16831802)
chr3 (1-286)||(13944879-13945164)
chr3 (1-286)||(8744379-8744664)
chr3 (1-250)||(17189265-17189514)
chr3 (6-286)||(31941758-31942038)
chr3 (1-250)||(24190195-24190443)
chr3 (6-286)||(31692179-31692459)
chr3 (18-277)||(12357533-12357792)
chr3 (1-280)||(16825268-16825547)
chr3 (1-286)||(14290521-14290806)
chr3 (1-286)||(18131336-18131621)
chr3 (1-280)||(35983042-35983321)
chr3 (18-280)||(10408829-10409091)
chr3 (18-280)||(47126805-47127067)
chr3 (1-246)||(12181239-12181484)
chr3 (18-280)||(28757180-28757442)
chr3 (1-284)||(12857485-12857768)
chr3 (1-250)||(17494538-17494790)
chr3 (12-250)||(11958181-11958419)
chr3 (18-280)||(16326713-16326977)
chr3 (1-213)||(15230531-15230743)
chr3 (1-213)||(15236399-15236611)
chr3 (1-286)||(13317558-13317843)
chr3 (194-286)||(11949107-11949199)
chr3 (123-284)||(15008695-15008853)
chr3 (1-106)||(6603757-6603862)
chr3 (3-111)||(3688960-3689068)
chr3 (3-106)||(6597077-6597180)
chr3 (3-106)||(13255712-13255815)
chr3 (3-106)||(16638795-16638898)
chr3 (3-106)||(16753706-16753809)
chr3 (3-106)||(43165697-43165800)
chr3 (57-103)||(10008625-10008671)
chr3 (57-103)||(10909235-10909281)
chr3 (66-212)||(19727679-19727825)
chr3 (6-139)||(12508559-12508692)
chr3 (3-111)||(5421935-5422043)
chr3 (1-276)||(11861208-11861483)
chr3 (60-103)||(20059116-20059159)
chr3 (3-106)||(48428469-48428572)
chr3 (125-211)||(2037025-2037111)
chr3 (125-211)||(2040766-2040852)
chr3 (150-284)||(12501780-12501914)
chr3 (60-106)||(12889731-12889777)
chr3 (125-211)||(14039676-14039762)
chr3 (60-106)||(15586454-15586500)
chr3 (150-212)||(23079166-23079228)
chr3 (72-212)||(23414861-23415001)
chr3 (60-111)||(15345307-15345358)
chr3 (60-103)||(15399580-15399623)
chr3 (60-103)||(15713118-15713161)
chr3 (2-52)||(2245662-2245712)
chr3 (3-205)||(12843105-12843307)
chr3 (150-212)||(15065990-15066052)
chr3 (3-97)||(53382024-53382118)
chr3 (60-97)||(26790475-26790512)
chr3 (60-96)||(24186222-24186258)
chr3 (6-205)||(15262556-15262755)
chr3 (60-103)||(15359077-15359120)
chr3 (150-205)||(17497617-17497672)
chr3 (150-212)||(16695083-16695145)
chr3 (192-280)||(10417225-10417313)
chr3 (150-202)||(14873734-14873786)
[»] chr7 (39 HSPs)
chr7 (3-286)||(14144877-14145160)
chr7 (1-286)||(18050701-18050986)
chr7 (3-286)||(14283124-14283407)
chr7 (24-250)||(11385200-11385426)
chr7 (14-253)||(15099364-15099603)
chr7 (27-284)||(12712437-12712694)
chr7 (15-280)||(19150233-19150498)
chr7 (15-280)||(20749632-20749897)
chr7 (1-286)||(12798252-12798534)
chr7 (1-280)||(26115338-26115617)
chr7 (15-280)||(14261008-14261273)
chr7 (18-280)||(26091563-26091825)
chr7 (18-280)||(40924582-40924844)
chr7 (6-250)||(16947225-16947469)
chr7 (18-280)||(49155523-49155785)
chr7 (3-253)||(12459877-12460127)
chr7 (18-280)||(21755634-21755896)
chr7 (3-199)||(13024647-13024843)
chr7 (54-277)||(13676676-13676899)
chr7 (18-280)||(13965433-13965695)
chr7 (1-213)||(12203548-12203760)
chr7 (27-184)||(13004783-13004940)
chr7 (4-214)||(15627811-15628021)
chr7 (60-212)||(9591653-9591805)
chr7 (3-103)||(15157832-15157932)
chr7 (3-106)||(10873853-10873956)
chr7 (60-103)||(12690896-12690939)
chr7 (1-212)||(16726211-16726422)
chr7 (60-106)||(8710997-8711043)
chr7 (3-103)||(11233988-11234088)
chr7 (1-212)||(17703225-17703436)
chr7 (3-103)||(44788126-44788226)
chr7 (60-103)||(11549934-11549977)
chr7 (1-214)||(11984279-11984492)
chr7 (60-106)||(14335788-14335834)
chr7 (60-106)||(18587003-18587049)
chr7 (3-103)||(13689436-13689536)
chr7 (60-103)||(14957903-14957946)
chr7 (57-103)||(18181138-18181184)
[»] chr8 (27 HSPs)
chr8 (3-286)||(22054155-22054438)
chr8 (3-271)||(22027486-22027754)
chr8 (1-287)||(21928719-21929005)
chr8 (1-284)||(22374163-22374446)
chr8 (3-250)||(31413738-31413985)
chr8 (1-286)||(19985472-19985757)
chr8 (1-280)||(28984209-28984488)
chr8 (18-256)||(16268445-16268683)
chr8 (3-202)||(29300632-29300831)
chr8 (15-210)||(20391454-20391649)
chr8 (13-205)||(22523883-22524075)
chr8 (57-111)||(19481335-19481389)
chr8 (6-212)||(30310353-30310559)
chr8 (3-103)||(19115872-19115972)
chr8 (3-103)||(20015472-20015572)
chr8 (60-111)||(17671288-17671339)
chr8 (60-97)||(22117441-22117478)
chr8 (12-280)||(6606684-6606952)
chr8 (60-212)||(15536749-15536901)
chr8 (150-202)||(21163883-21163935)
chr8 (1-212)||(32603511-32603722)
chr8 (60-103)||(18860049-18860092)
chr8 (150-205)||(21391214-21391269)
chr8 (150-205)||(21780540-21780595)
chr8 (60-103)||(22126225-22126268)
chr8 (60-111)||(21671982-21672033)
chr8 (54-134)||(3274550-3274629)
[»] scaffold0239 (1 HSPs)
scaffold0239 (3-286)||(9553-9836)
[»] scaffold0003 (2 HSPs)
scaffold0003 (3-286)||(203636-203919)
scaffold0003 (6-103)||(424746-424843)
[»] scaffold0005 (1 HSPs)
scaffold0005 (3-286)||(263481-263764)
[»] scaffold0765 (1 HSPs)
scaffold0765 (3-280)||(6023-6300)
[»] chr5 (42 HSPs)
chr5 (1-286)||(17266277-17266562)
chr5 (15-212)||(21870235-21870432)
chr5 (15-212)||(21874515-21874712)
chr5 (18-249)||(22505856-22506087)
chr5 (3-250)||(23563113-23563360)
chr5 (18-280)||(14883951-14884213)
chr5 (12-257)||(20345451-20345696)
chr5 (18-257)||(25851241-25851480)
chr5 (3-250)||(23077850-23078097)
chr5 (12-205)||(21983131-21983324)
chr5 (1-284)||(23669774-23670057)
chr5 (3-106)||(27521741-27521844)
chr5 (12-205)||(21560979-21561172)
chr5 (3-103)||(27682348-27682448)
chr5 (3-106)||(16359837-16359940)
chr5 (3-106)||(34569829-34569932)
chr5 (150-212)||(18782346-18782408)
chr5 (27-139)||(23474499-23474611)
chr5 (3-111)||(40712110-40712218)
chr5 (60-103)||(14996744-14996787)
chr5 (60-103)||(22138006-22138049)
chr5 (60-103)||(22329892-22329935)
chr5 (60-111)||(27665508-27665559)
chr5 (1-284)||(43122609-43122892)
chr5 (125-211)||(16258103-16258189)
chr5 (125-211)||(22591822-22591908)
chr5 (125-211)||(22595377-22595463)
chr5 (15-284)||(23461131-23461400)
chr5 (192-280)||(20779059-20779147)
chr5 (150-202)||(23526293-23526345)
chr5 (60-103)||(19773298-19773341)
chr5 (59-202)||(21883017-21883160)
chr5 (60-103)||(27613694-27613737)
chr5 (60-103)||(41774180-41774223)
chr5 (18-212)||(21410366-21410560)
chr5 (66-194)||(21331997-21332125)
chr5 (66-214)||(21631407-21631555)
chr5 (192-280)||(22465096-22465184)
chr5 (60-103)||(22351257-22351300)
chr5 (66-205)||(26735736-26735875)
chr5 (60-103)||(29473078-29473121)
chr5 (60-103)||(37288501-37288544)
[»] chr2 (34 HSPs)
chr2 (1-286)||(12577210-12577495)
chr2 (3-286)||(19716320-19716603)
chr2 (3-286)||(19720883-19721166)
chr2 (6-250)||(23097324-23097568)
chr2 (1-277)||(23274459-23274735)
chr2 (18-280)||(20848452-20848711)
chr2 (60-284)||(28350734-28350958)
chr2 (12-284)||(21901396-21901668)
chr2 (3-109)||(44382876-44382982)
chr2 (3-103)||(10871887-10871987)
chr2 (1-212)||(23116360-23116571)
chr2 (3-103)||(24265407-24265507)
chr2 (3-106)||(9338616-9338719)
chr2 (3-106)||(9487250-9487353)
chr2 (150-284)||(24657108-24657242)
chr2 (3-103)||(17002037-17002137)
chr2 (3-106)||(16984274-16984377)
chr2 (60-111)||(22322705-22322756)
chr2 (60-111)||(24713063-24713114)
chr2 (150-212)||(22462931-22462993)
chr2 (151-212)||(23205245-23205306)
chr2 (151-212)||(23676849-23676910)
chr2 (3-106)||(27374303-27374406)
chr2 (150-276)||(11351161-11351287)
chr2 (3-97)||(16931598-16931692)
chr2 (156-202)||(21320459-21320505)
chr2 (150-278)||(24704932-24705060)
chr2 (78-214)||(24817218-24817354)
chr2 (3-109)||(22733077-22733183)
chr2 (3-109)||(22742269-22742375)
chr2 (60-103)||(24874113-24874156)
chr2 (1-109)||(24704783-24704891)
chr2 (150-202)||(23028912-23028963)
chr2 (150-202)||(24678428-24678480)
[»] scaffold0348 (2 HSPs)
scaffold0348 (6-286)||(4618-4898)
scaffold0348 (3-286)||(17250-17533)
[»] scaffold0114 (1 HSPs)
scaffold0114 (15-286)||(40313-40584)
[»] chr4 (39 HSPs)
chr4 (1-286)||(51603553-51603838)
chr4 (1-286)||(53750231-53750516)
chr4 (6-286)||(16150862-16151142)
chr4 (6-286)||(16155008-16155288)
chr4 (24-286)||(14993151-14993413)
chr4 (1-286)||(15073585-15073870)
chr4 (3-250)||(15267038-15267285)
chr4 (3-280)||(18259673-18259950)
chr4 (18-280)||(3261572-3261834)
chr4 (18-280)||(20893263-20893525)
chr4 (1-280)||(7357499-7357778)
chr4 (1-280)||(44658627-44658906)
chr4 (18-280)||(29450315-29450577)
chr4 (18-257)||(11204010-11204249)
chr4 (15-205)||(14697408-14697598)
chr4 (12-280)||(27903617-27903885)
chr4 (1-211)||(8708978-8709188)
chr4 (12-281)||(13879340-13879609)
chr4 (59-212)||(18604378-18604531)
chr4 (3-111)||(8389810-8389918)
chr4 (60-212)||(13513650-13513802)
chr4 (12-205)||(8343-8536)
chr4 (60-103)||(8050186-8050229)
chr4 (60-103)||(14300542-14300585)
chr4 (3-106)||(17091655-17091758)
chr4 (6-212)||(18223979-18224185)
chr4 (60-111)||(19775356-19775407)
chr4 (60-111)||(23959145-23959196)
chr4 (60-111)||(27714734-27714785)
chr4 (60-106)||(12480003-12480049)
chr4 (60-106)||(16233555-16233601)
chr4 (12-205)||(15548-15741)
chr4 (72-205)||(16219495-16219628)
chr4 (72-205)||(16222815-16222948)
chr4 (60-103)||(14683973-14684016)
chr4 (60-103)||(40476446-40476489)
chr4 (59-111)||(14162871-14162923)
chr4 (3-109)||(15144451-15144557)
chr4 (60-103)||(19635542-19635585)
[»] scaffold0067 (4 HSPs)
scaffold0067 (3-286)||(64368-64651)
scaffold0067 (3-286)||(48946-49229)
scaffold0067 (3-286)||(57980-58263)
scaffold0067 (1-253)||(29912-30164)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-286)||(251-536)
scaffold0222 (24-253)||(21102-21331)
[»] scaffold1914 (1 HSPs)
scaffold1914 (3-253)||(996-1246)
[»] scaffold0034 (3 HSPs)
scaffold0034 (15-283)||(11684-11952)
scaffold0034 (24-277)||(1739-1992)
scaffold0034 (12-280)||(70633-70901)
[»] scaffold0664 (1 HSPs)
scaffold0664 (6-286)||(7293-7573)
[»] scaffold0076 (1 HSPs)
scaffold0076 (3-283)||(53189-53469)
[»] scaffold0023 (2 HSPs)
scaffold0023 (3-286)||(164167-164450)
scaffold0023 (150-202)||(30487-30539)
[»] chr6 (41 HSPs)
chr6 (24-250)||(21566920-21567146)
chr6 (3-286)||(14376824-14377107)
chr6 (6-283)||(18797783-18798060)
chr6 (24-250)||(24515343-24515569)
chr6 (1-286)||(19438092-19438377)
chr6 (27-284)||(34642517-34642775)
chr6 (18-277)||(24367499-24367758)
chr6 (3-253)||(10465756-10466006)
chr6 (1-201)||(25771019-25771219)
chr6 (27-250)||(19456149-19456372)
chr6 (27-250)||(19466294-19466517)
chr6 (72-284)||(21474692-21474904)
chr6 (1-236)||(19486200-19486435)
chr6 (27-184)||(19881588-19881745)
chr6 (3-212)||(30677932-30678141)
chr6 (1-277)||(15462435-15462711)
chr6 (6-134)||(18660161-18660289)
chr6 (66-205)||(23081594-23081733)
chr6 (114-211)||(16813805-16813902)
chr6 (123-211)||(8720733-8720821)
chr6 (57-111)||(28312892-28312946)
chr6 (60-103)||(25115822-25115865)
chr6 (3-106)||(29589350-29589453)
chr6 (60-106)||(16575157-16575203)
chr6 (60-106)||(16620177-16620223)
chr6 (6-212)||(21764976-21765182)
chr6 (12-280)||(20010418-20010687)
chr6 (155-276)||(27559029-27559150)
chr6 (57-106)||(28260162-28260211)
chr6 (57-106)||(28285705-28285754)
chr6 (57-106)||(28338911-28338960)
chr6 (60-103)||(22829354-22829397)
chr6 (60-103)||(24292750-24292793)
chr6 (57-94)||(27205901-27205938)
chr6 (57-94)||(27243290-27243327)
chr6 (3-103)||(5836139-5836239)
chr6 (60-103)||(2871770-2871813)
chr6 (1-52)||(21474908-21474959)
chr6 (150-200)||(25756670-25756720)
chr6 (150-202)||(22437043-22437095)
chr6 (66-205)||(25958724-25958863)
[»] scaffold0476 (1 HSPs)
scaffold0476 (6-250)||(314-558)
[»] scaffold0058 (1 HSPs)
scaffold0058 (6-286)||(22377-22657)
[»] scaffold0235 (2 HSPs)
scaffold0235 (6-283)||(8231-8508)
scaffold0235 (6-283)||(18445-18722)
[»] scaffold1299 (1 HSPs)
scaffold1299 (24-250)||(1635-1861)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-286)||(98347-98632)
scaffold0020 (1-286)||(176242-176527)
[»] scaffold0074 (1 HSPs)
scaffold0074 (6-286)||(15327-15607)
[»] scaffold0072 (1 HSPs)
scaffold0072 (6-286)||(54302-54582)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-280)||(1075-1354)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-280)||(8005-8284)
[»] scaffold0053 (3 HSPs)
scaffold0053 (15-286)||(62550-62821)
scaffold0053 (150-250)||(65211-65311)
scaffold0053 (15-129)||(65100-65214)
[»] scaffold0010 (4 HSPs)
scaffold0010 (3-250)||(39099-39346)
scaffold0010 (60-212)||(14753-14905)
scaffold0010 (151-280)||(180753-180882)
scaffold0010 (27-205)||(5251-5429)
[»] scaffold0004 (2 HSPs)
scaffold0004 (12-250)||(319534-319772)
scaffold0004 (96-250)||(325998-326151)
[»] scaffold0420 (1 HSPs)
scaffold0420 (6-283)||(8872-9149)
[»] chr1 (32 HSPs)
chr1 (15-286)||(21742399-21742670)
chr1 (24-286)||(22015601-22015863)
chr1 (15-286)||(21738883-21739154)
chr1 (24-275)||(20832757-20833007)
chr1 (3-250)||(24096450-24096697)
chr1 (18-280)||(21961305-21961567)
chr1 (18-280)||(31536847-31537109)
chr1 (18-280)||(52989019-52989280)
chr1 (5-250)||(19857582-19857827)
chr1 (18-280)||(20074559-20074821)
chr1 (18-280)||(20297661-20297923)
chr1 (18-280)||(48426151-48426413)
chr1 (18-280)||(38909676-38909938)
chr1 (18-280)||(37680327-37680589)
chr1 (3-214)||(16379407-16379618)
chr1 (3-212)||(21228391-21228600)
chr1 (12-280)||(18273045-18273313)
chr1 (57-111)||(41350560-41350614)
chr1 (3-111)||(16347433-16347541)
chr1 (3-111)||(16354081-16354189)
chr1 (12-280)||(20853604-20853872)
chr1 (60-172)||(21045046-21045158)
chr1 (57-103)||(51330384-51330430)
chr1 (60-111)||(33387924-33387975)
chr1 (1-210)||(17041849-17042057)
chr1 (9-139)||(22117102-22117232)
chr1 (60-103)||(19109791-19109834)
chr1 (60-103)||(21833723-21833766)
chr1 (47-109)||(21752465-21752527)
chr1 (60-103)||(21842633-21842676)
chr1 (60-103)||(22400741-22400784)
chr1 (59-109)||(22402010-22402060)
[»] scaffold0751 (1 HSPs)
scaffold0751 (15-286)||(5436-5706)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-253)||(37227-37479)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-280)||(50366-50645)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-285)||(4218-4501)
scaffold0017 (150-284)||(16979-17113)
[»] scaffold0056 (1 HSPs)
scaffold0056 (3-250)||(649-896)
[»] scaffold0106 (1 HSPs)
scaffold0106 (3-280)||(34598-34875)
[»] scaffold0266 (1 HSPs)
scaffold0266 (21-280)||(16898-17157)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-280)||(70369-70648)
[»] scaffold0029 (4 HSPs)
scaffold0029 (76-284)||(115819-116027)
scaffold0029 (151-280)||(93808-93937)
scaffold0029 (60-103)||(107600-107643)
scaffold0029 (153-202)||(8553-8602)
[»] scaffold1530 (1 HSPs)
scaffold1530 (27-246)||(799-1018)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-280)||(153753-154032)
[»] scaffold0523 (2 HSPs)
scaffold0523 (15-286)||(5695-5963)
scaffold0523 (1-280)||(11507-11786)
[»] scaffold0706 (1 HSPs)
scaffold0706 (12-277)||(4984-5249)
[»] scaffold0518 (1 HSPs)
scaffold0518 (5-174)||(2198-2367)
[»] scaffold0102 (1 HSPs)
scaffold0102 (5-250)||(42989-43234)
[»] scaffold1032 (1 HSPs)
scaffold1032 (12-280)||(590-858)
[»] scaffold0151 (1 HSPs)
scaffold0151 (3-250)||(308-555)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-280)||(6066-6344)
[»] scaffold0865 (1 HSPs)
scaffold0865 (12-205)||(1047-1240)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-286)||(29782-30067)
[»] scaffold0133 (1 HSPs)
scaffold0133 (12-205)||(28060-28253)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-212)||(5666-5877)
[»] scaffold2062 (1 HSPs)
scaffold2062 (1-283)||(636-918)
[»] scaffold0146 (1 HSPs)
scaffold0146 (24-250)||(71-297)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-280)||(4068-4347)
[»] scaffold0188 (1 HSPs)
scaffold0188 (3-207)||(33138-33342)
[»] scaffold0031 (1 HSPs)
scaffold0031 (24-212)||(115953-116141)
[»] scaffold1426 (1 HSPs)
scaffold1426 (18-280)||(1388-1650)
[»] scaffold0041 (1 HSPs)
scaffold0041 (18-280)||(41996-42258)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-286)||(51906-52191)
[»] scaffold1517 (1 HSPs)
scaffold1517 (1-202)||(1251-1452)
[»] scaffold0490 (2 HSPs)
scaffold0490 (15-191)||(3215-3391)
scaffold0490 (3-109)||(323-429)
[»] scaffold0276 (1 HSPs)
scaffold0276 (18-280)||(23704-23966)
[»] scaffold0243 (2 HSPs)
scaffold0243 (12-250)||(9547-9785)
scaffold0243 (3-205)||(23711-23913)
[»] scaffold0167 (1 HSPs)
scaffold0167 (24-250)||(5344-5570)
[»] scaffold0118 (1 HSPs)
scaffold0118 (18-280)||(722-984)
[»] scaffold0367 (1 HSPs)
scaffold0367 (3-250)||(8787-9034)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-253)||(514134-514369)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-280)||(12178-12455)
scaffold0261 (1-280)||(20358-20635)
[»] scaffold1056 (1 HSPs)
scaffold1056 (1-280)||(1981-2259)
[»] scaffold0310 (1 HSPs)
scaffold0310 (3-253)||(11265-11515)
[»] scaffold0203 (2 HSPs)
scaffold0203 (147-284)||(764-901)
scaffold0203 (6-106)||(3820-3920)
[»] scaffold0104 (1 HSPs)
scaffold0104 (15-286)||(43197-43468)
[»] scaffold1845 (1 HSPs)
scaffold1845 (3-238)||(1070-1305)
[»] scaffold0405 (1 HSPs)
scaffold0405 (15-286)||(5857-6128)
[»] scaffold0317 (1 HSPs)
scaffold0317 (54-277)||(2895-3118)
[»] scaffold0054 (2 HSPs)
scaffold0054 (95-276)||(63377-63558)
scaffold0054 (1-70)||(63303-63372)
[»] scaffold2165 (1 HSPs)
scaffold2165 (18-280)||(584-846)
[»] scaffold0100 (1 HSPs)
scaffold0100 (3-205)||(16375-16577)
[»] scaffold0068 (1 HSPs)
scaffold0068 (3-253)||(66874-67124)
[»] scaffold0585 (1 HSPs)
scaffold0585 (1-152)||(625-775)
[»] scaffold0190 (1 HSPs)
scaffold0190 (3-202)||(30092-30291)
[»] scaffold0130 (2 HSPs)
scaffold0130 (6-284)||(3661-3939)
scaffold0130 (154-212)||(7696-7754)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-284)||(36755-37038)
[»] scaffold0077 (1 HSPs)
scaffold0077 (27-205)||(57404-57582)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-199)||(251961-252157)
scaffold0009 (66-212)||(229681-229827)
[»] scaffold0270 (2 HSPs)
scaffold0270 (27-205)||(7209-7387)
scaffold0270 (27-205)||(14339-14517)
[»] scaffold0040 (2 HSPs)
scaffold0040 (21-205)||(18181-18365)
scaffold0040 (3-205)||(110673-110875)
[»] scaffold0443 (1 HSPs)
scaffold0443 (177-280)||(12058-12161)
[»] scaffold0148 (1 HSPs)
scaffold0148 (3-214)||(2326-2537)
[»] scaffold0457 (1 HSPs)
scaffold0457 (1-106)||(13818-13923)
[»] scaffold0289 (1 HSPs)
scaffold0289 (1-212)||(117-328)
[»] scaffold0113 (1 HSPs)
scaffold0113 (18-94)||(17686-17762)
[»] scaffold0451 (1 HSPs)
scaffold0451 (3-212)||(13798-14007)
[»] scaffold0042 (2 HSPs)
scaffold0042 (24-214)||(26679-26869)
scaffold0042 (150-202)||(36733-36785)
[»] scaffold1274 (1 HSPs)
scaffold1274 (6-139)||(20-152)
[»] scaffold1600 (1 HSPs)
scaffold1600 (7-139)||(468-600)
[»] scaffold0088 (2 HSPs)
scaffold0088 (18-106)||(30345-30433)
scaffold0088 (144-250)||(30225-30331)
[»] scaffold0609 (2 HSPs)
scaffold0609 (12-190)||(7908-8086)
scaffold0609 (113-284)||(1196-1367)
[»] scaffold0708 (1 HSPs)
scaffold0708 (74-199)||(4982-5107)
[»] scaffold0075 (2 HSPs)
scaffold0075 (12-205)||(48066-48259)
scaffold0075 (12-205)||(55246-55439)
[»] scaffold1220 (1 HSPs)
scaffold1220 (1-276)||(1-276)
[»] scaffold0080 (3 HSPs)
scaffold0080 (150-202)||(32218-32270)
scaffold0080 (60-212)||(10062-10214)
scaffold0080 (60-212)||(12717-12869)
[»] scaffold0447 (1 HSPs)
scaffold0447 (66-205)||(1693-1832)
[»] scaffold0431 (1 HSPs)
scaffold0431 (60-103)||(10803-10846)
[»] scaffold0383 (1 HSPs)
scaffold0383 (66-205)||(4557-4696)
[»] scaffold0018 (2 HSPs)
scaffold0018 (66-205)||(23127-23266)
scaffold0018 (78-214)||(9192-9328)
[»] scaffold0006 (1 HSPs)
scaffold0006 (66-205)||(104562-104701)
[»] scaffold0012 (1 HSPs)
scaffold0012 (27-205)||(216210-216388)
[»] scaffold0333 (1 HSPs)
scaffold0333 (3-256)||(18935-19187)
[»] scaffold0181 (1 HSPs)
scaffold0181 (171-284)||(28862-28975)
[»] scaffold0044 (2 HSPs)
scaffold0044 (59-212)||(17489-17642)
scaffold0044 (60-103)||(3859-3902)
[»] scaffold0285 (1 HSPs)
scaffold0285 (60-212)||(5327-5479)
[»] scaffold0273 (1 HSPs)
scaffold0273 (150-202)||(379-431)
[»] scaffold0177 (2 HSPs)
scaffold0177 (13-212)||(14817-15016)
scaffold0177 (150-212)||(11269-11331)
[»] scaffold0819 (1 HSPs)
scaffold0819 (151-202)||(453-504)
[»] scaffold0679 (1 HSPs)
scaffold0679 (1-52)||(799-850)
[»] scaffold0309 (2 HSPs)
scaffold0309 (187-286)||(12982-13081)
scaffold0309 (3-109)||(19830-19936)
[»] scaffold0122 (1 HSPs)
scaffold0122 (3-166)||(40273-40436)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-52)||(25949-26000)
[»] scaffold0081 (2 HSPs)
scaffold0081 (150-201)||(21944-21995)
scaffold0081 (150-201)||(37368-37419)
[»] scaffold0028 (3 HSPs)
scaffold0028 (60-99)||(11891-11930)
scaffold0028 (60-99)||(21419-21458)
scaffold0028 (63-103)||(55439-55479)
[»] scaffold1881 (1 HSPs)
scaffold1881 (150-212)||(393-455)
[»] scaffold0621 (2 HSPs)
scaffold0621 (3-205)||(353-555)
scaffold0621 (3-205)||(4770-4972)
[»] scaffold0546 (1 HSPs)
scaffold0546 (150-212)||(208-270)
[»] scaffold0507 (1 HSPs)
scaffold0507 (27-141)||(11428-11542)
[»] scaffold0501 (1 HSPs)
scaffold0501 (72-202)||(263-393)
[»] scaffold0109 (1 HSPs)
scaffold0109 (150-212)||(13037-13099)
[»] scaffold0055 (1 HSPs)
scaffold0055 (64-106)||(22679-22721)
[»] scaffold0052 (1 HSPs)
scaffold0052 (64-106)||(7668-7710)
[»] scaffold0993 (1 HSPs)
scaffold0993 (72-205)||(1318-1451)
[»] scaffold0331 (1 HSPs)
scaffold0331 (66-139)||(14808-14881)
[»] scaffold0319 (1 HSPs)
scaffold0319 (3-103)||(6938-7038)
[»] scaffold0293 (1 HSPs)
scaffold0293 (68-205)||(15746-15883)
[»] scaffold0605 (1 HSPs)
scaffold0605 (192-276)||(1545-1629)
[»] scaffold0297 (1 HSPs)
scaffold0297 (66-202)||(7486-7622)
[»] scaffold0022 (3 HSPs)
scaffold0022 (3-111)||(42062-42170)
scaffold0022 (3-111)||(75782-75890)
scaffold0022 (3-109)||(34537-34643)
[»] scaffold1423 (1 HSPs)
scaffold1423 (150-205)||(291-346)
[»] scaffold0611 (1 HSPs)
scaffold0611 (150-205)||(9356-9411)
[»] scaffold0282 (1 HSPs)
scaffold0282 (60-139)||(13297-13376)
[»] scaffold0207 (1 HSPs)
scaffold0207 (66-205)||(4384-4523)
[»] scaffold0165 (1 HSPs)
scaffold0165 (64-163)||(12322-12421)
[»] scaffold0120 (1 HSPs)
scaffold0120 (150-205)||(14420-14475)
[»] scaffold0412 (1 HSPs)
scaffold0412 (150-276)||(15492-15618)
[»] scaffold0411 (1 HSPs)
scaffold0411 (3-109)||(8843-8949)
[»] scaffold0403 (1 HSPs)
scaffold0403 (3-109)||(15343-15449)
[»] scaffold0324 (1 HSPs)
scaffold0324 (3-109)||(2421-2527)
[»] scaffold0180 (1 HSPs)
scaffold0180 (147-205)||(30923-30981)
[»] scaffold0278 (1 HSPs)
scaffold0278 (66-163)||(3929-4026)
[»] scaffold0259 (1 HSPs)
scaffold0259 (60-97)||(8699-8736)
[»] scaffold0198 (1 HSPs)
scaffold0198 (62-103)||(30725-30766)
[»] scaffold0357 (1 HSPs)
scaffold0357 (67-111)||(17807-17851)
[»] scaffold0342 (1 HSPs)
scaffold0342 (27-139)||(14055-14167)
[»] scaffold0305 (1 HSPs)
scaffold0305 (150-274)||(3131-3255)


Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 16384361 - 16384646
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  16384361 gtaggatctatgaggaggacagcaaagctcattataaggtgatgagtgagcgaagaggtaagggacaacagagtcgtcctaagccatacagtgcccctgc 16384460  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16384461 tgacaagggtaagcagagacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaagtccacaag 16384560  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  16384561 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttggctgattgcaagcgtggtgatgt 16384646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 16831519 - 16831802
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  16831519 aggatctatgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcatcctaagccgtatagtgcccctgctg 16831618  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16831619 ataagggtaagcagagacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 16831718  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  16831719 taatgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgttagcggactgcaagcgtggtgatgt 16831802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 13945164 - 13944879
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||||| ||||||||  |    
T  13945164 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgac 13945065  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  13945064 tgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaag 13944965  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  13944964 agtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 13944879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 8744379 - 8744664
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| ||||| ||||||||  |    
T  8744379 gtaggatctacgaggaggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgac 8744478  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  8744479 tgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaag 8744578  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  8744579 agtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 8744664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 17189514 - 17189265
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || |||||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||| |||||||||||||| |||||    
T  17189514 gtagaatctatgaagaggacacaaaagctcattacaaggtgatgagtgaccgcagaggcaagggccagcagagtcgtccgaagccgtacagtgctcctgc 17189415  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    | ||||||| | ||||||| ||||||||||||||||| | || | |||||||||||||| ||| || ||||||||||||||||||||||||||||||||     
T  17189414 taacaagggaaagcagagatttaatgatgagaggaggtccaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaa 17189315  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17189314 agtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaa 17189265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 31942038 - 31941758
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| |||||  | || ||| |||| |||||||| |||||||| ||||| ||||||||||    
T  31942038 atctatgaggaggacacgaaagctcattataaggtgatgagtgatcgaaggagcaaaggatagcagagtcgtccgaagccgtatagtgctcctgctgaca 31941939  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || | |||||   | ||||||||||||||||| |||| |||| |||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  31941938 aagggaagcagaagttgaatgatgagaggaggcccaataggagaaatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaa 31941839  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     ||||||||||| |||||||||||||| |||||||||||||||||||| |||    ||||||| |||||||||||||||||    
T  31941838 tgtttgtaccaaagatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgactgcaagcgtggtgatgt 31941758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 24190443 - 24190195
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || |||||||| ||||||||||| |||||||||| ||| || ||||| ||||  ||||| |||||||| |||||||||||||| |||||    
T  24190443 gtagaatctatgaagaggacacgaaagctcattacaaggtgatgactgaccgcagaggcaaggc-cagcagagtcgtccgaagccgtacagtgctcctgc 24190345  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||| | ||||||| | |||||||||||||||   || | |||||||||||||| ||| || ||||||||||||||||||||||||||||||||     
T  24190344 tgacaagggaaagcagagattgaatgatgagaggaggtacaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaa 24190245  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24190244 agtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaa 24190195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 6 - 286
Target Start/End: Original strand, 31692179 - 31692459
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| |||||  | || |||||||| |||||||| |||||||| ||||| ||||||||||    
T  31692179 atctatgaggaggacacgaaagctcattataaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgaca 31692278  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || | |||||   | ||||||||||||||||| |||| |||| ||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||    
T  31692279 aagggaagcagaagttgaatgatgagaggaggcccaataggagaaatgcttctgctgagatcgtttgttacaagtgtggtgagaaaggccacaagagtaa 31692378  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     ||||||||||| |||||||||||||| |||||||||||| ||||||| |||    ||||||| |||||| ||||||||||    
T  31692379 tgtttgtaccaaagatgagaagaagtgtttcaggtgtggttagaagggacacactctagctgactgcaagagtggtgatgt 31692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 12357533 - 12357792
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||| || || ||||| |||||||||||||| | | |||    
T  12357533 gacactaaagctcattacaaggtgatgagtgagcgcagaggtaagggacatcagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagtaga 12357632  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
    | || ||||||||||||||||| || | ||||||| ||||||||||||| ||||| |  ||||||||||| ||||||||||||||||| || |||   ||    
T  12357633 ggctgaatgatgagaggaggcccaagaggagagatactcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtgataa 12357732  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcg 277  Q
     |||||||||||||||||||||||||||||||| || |||   ||||||||||| |||||    
T  12357733 agatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcg 12357792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 16825268 - 16825547
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || || || || ||||||||||| ||||||||||||||||| ||||| ||||||||||  |||||||| |||||||| ||||||||| |    
T  16825268 gtaggatctatgaagaagatacgaaagctcattacaaggtgatgagtgagcgcagaggcaagggacagctgagtcgtccgaagccgtatagtgcccctcc 16825367  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| | ||||| | || |||||||||||||| || ||||||||||||||| |||| || |||||||| |||||||| || ||||||||||||    
T  16825368 tgacaagggtaagtagagattgaaagatgagaggaggcccaagatgagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaag 16825467  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| ||||||  |   ||||||||||||||||||||||||||| | || || |||   ||||||||||| ||||||||    
T  16825468 agtaatgtttgtgaccgtgatgagaagaagtgcttcaggtgtggtaaaaaaggacacactttagctgattgtaagcgtgg 16825547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 14290521 - 14290806
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||| |||||    
T  14290521 gtagaatctatgaagaggataccaaagctcattataaagtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgc 14290620  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||||| || ||||||||||||||||| || | ||||||||||||| |||||||  |||| || |||||||| |||||||||||||||    
T  14290621 tgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaag 14290720  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| || |||      ||||||||||||||||| |||||||| ||||| || |||   ||||||||||| |||||||| |||||    
T  14290721 agtaatgtgtgtgattgagatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatgt 14290806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 18131336 - 18131621
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || || ||||| ||||||||||| || ||||||||||| || |||||||| |||||||| ||||||||||| || || ||||| |||||    
T  18131336 gtaggatatatgaagaagacactaaagctcattacaaagtgatgagtgaacggagaggtaaaggacagcagagtcgtcctaaaccatatagtgctcctgc 18131435  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || |  |||||||| ||| ||||||||||||| || | |||||||||||||| |||||| | ||| |  ||||||||||||||||||||||||    
T  18131436 tgacaaaggaaaacagagactgaataatgagaggaggcccaagaggagagatgctcctgttgagattgattgctacaagtgtggcgagaaaggccacaag 18131535  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| ||||||   || |||||||||||||||||||||||||||||||| || |||   |||||| |||| |||||||| |||||    
T  18131536 agtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacgcattagctaattgtaagcgtggggatgt 18131621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 35983321 - 35983042
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || ||||| ||||||||||||||||| |||||||||||| | ||||||||||||||||| ||| |||| || ||||| ||||| |||||    
T  35983321 gtagaatctatgaagaggataccaaagctcattataaagtgatgagtgagtgcagaggtaagggacagcagagttgtccgaaaccgtatagtgctcctgc 35983222  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||||| || ||||||||||||||||| || | ||||||||||||| ||| |||  |||| || |||||||| |||||||||||||||    
T  35983221 tgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgtgattatttgcttcaagtgtggtgagaaaggccacaag 35983122  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || ||| ||| | |||||||||||||| ||||| ||||| ||||| || |||   || |||||||||||||||||    
T  35983121 agtaatgtgtgtgaccga-gatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtgg 35983042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 10409091 - 10408829
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || |||||||||||||| |||||||| ||||||||||||||||  ||||    
T  10409091 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaccagagtcgtcctaagccttacagtgctcctgctgacaagggtaaacaga 10408992  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||| |||||||| |||||||  || ||||| |||||||||||||||||||| ||||||   |     
T  10408991 agatgggtgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgtttgtggaag 10408892  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  10408891 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 10408829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 47127067 - 47126805
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  47127067 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 47126968  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
    |  |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  47126967 ggatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 47126868  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  47126867 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 47126805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12181484 - 12181239
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || ||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||| || |||||||  |||||||| ||||| |||||    
T  12181484 gtaggatttatgaggaggacacgaaagctcattacaaggtgatgagtgaacgaagaggcaagggacaacagagtcgtctgaagccgtatagtgctcctgc 12181385  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| | ||||  | ||||||||||||||| | || | ||||||||||||| |||| ||  |||| || |||||||| || ||||||||||||    
T  12181384 tgacaagggtaagtagaggttaaatgatgagaggaggaccaagaggagagatgctcctactgacattttttgcttcaagtgtggtgaaaaaggccacaag 12181285  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtc 246  Q
    ||||| || |||   |  |||||||||||||||||||| |||||||    
T  12181284 agtaaagtctgtgatagagatgagaagaagtgcttcagttgtggtc 12181239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 28757442 - 28757180
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  28757442 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 28757343  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  28757342 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 28757243  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  28757242 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 28757180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 12857485 - 12857768
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| |||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||| || ||||| ||||| |||||    
T  12857485 gtagaatctatgaggaggatacaaaagctcattataaggtgatgagtgagcgtagaggcaagggacagtagagtcgtccaaaaccgtatagtgctcctgc 12857584  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||  |||| ||||||||||||||||| || | ||||||||||||| ||||||| || ||||| |||||||| || || ||||||| |    
T  12857585 tgacaaaggtaaacaaggactgaatgatgagaggaggcctaaaaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaagggccacatg 12857684  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||| || |||  |   |||||||||||||| ||| | |||||  |||| || ||| |  ||||||| ||||||||| |||||    
T  12857685 agtaatgtatgtgactgtgatgagaagaagtgtttccgatgtggaaagaaaggacacataatagctgagtgcaagcgtcgtgat 12857768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 17494790 - 17494538
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccct-- 98  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||  |||||||| ||||||||| | ||||| || ||||| |||      
T  17494790 gtagaatctatgaggaggataccaaagctcattacaaggtgatgagtgagcgcagagccaagggacaacaaagtcgttcgaagccatatagtgctcctgc 17494691  T
Q  99 --gctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggcca 196  Q
      ||||| ||||||| ||||||  | ||||||||||||||||| || | ||||||||||| | ||||||| ||||| || || ||||| || ||||||||    
T  17494690 tggctgagaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcatactgagattgtttgcttcaaatgtggtgaaaaaggcca 17494591  T
Q  197 caagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||| ||||||   |  ||||||||||||||| ||||||||||||||||    
T  17494590 caagagtaatgtttgtgatagagatgagaagaagtgc-tcaggtgtggtcagaa 17494538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 11958181 - 11958419
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||| ||||| |||| |||||| ||||||||||||||| | ||||||||||||||||| | ||||||||| || |||||||| ||||||||||| || |    
T  11958181 gaggaagacacaaaagttcattacaaggtgatgagtgagaggagaggtaagggacagcagaatcgtcctaaaccttacagtgctcctgctgacaaaggga 11958280  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
      |||||| | |||||||| |||||||  || | |||||||||||||||||| || ||||||| ||||||||| || ||||||||||| || || | |||    
T  11958281 aacagagaatgaatgatgataggaggcttaagaggagagatgctcctgctgaaattgtttgttataagtgtggtgaaaaaggccacaaaagcaatgcttg 11958380  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    |   |  ||||||| |||||| |||||||||||||||||    
T  11958381 tggtagagatgagaggaagtgtttcaggtgtggtcagaa 11958419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 16326713 - 16326977
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || || ||||||||||| ||||||||||||||  ||||||| ||||||||||| || | ||| |    
T  16326713 gacaccaaagctcattacaagataatgagtgagaggaggggcaagggacagcagagtcgtcctaagcctgacagtgctcctgctgacaaaggaaagcaaa 16326812  T
Q  118 gacttaatgatgagaggaggccgaatatgagaga-tgctcctgctgaga-tagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtacc 215  Q
       | |||||||| ||||| || || | |||||| |||||||||||||| | ||||||| ||||||||| || |||||||||||||| || ||||||       
T  16326813 aggtgaatgatgataggagacccaagaggagagactgctcctgctgagacttgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggt 16326912  T
Q  216 aaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |  ||||||| ||| || |||||||||||||||||||| |||   |||||||| || ||||||||    
T  16326913 agagatgagaggaaatgtttcaggtgtggtcagaagggacacaatttagctgaatgtaagcgtgg 16326977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 15230743 - 15230531
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggta--agggacagcaaagtcgtcctaagccgtacagtgcccct 98  Q
    |||| ||||| |||||||| |||||||||||||||||||| |||||||||  |||||| |  | || || ||| ||||||||||||| || ||||| |||    
T  15230743 gtagaatctatgaggaggataccaaagctcattataaggttatgagtgag--aagaggaacaaaggccaacaaggtcgtcctaagccctatagtgctcct 15230646  T
Q  99 gctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccaca 198  Q
    |||||||| || | ||| ||| | ||||||||||||||||| || |  | ||||| |||||||||||| ||||| |  |||||||| || || |||||||    
T  15230645 gctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagtgtggtgaaaagggccaca 15230546  T
Q  199 agagtaacgtttgta 213  Q
    ||||||| |||||||    
T  15230545 agagtaatgtttgta 15230531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 15236611 - 15236399
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggta--agggacagcaaagtcgtcctaagccgtacagtgcccct 98  Q
    |||| ||||| |||||||| |||||||||||||||||||| |||||||||  |||||| |  | || || ||| ||||||||||||| || ||||| |||    
T  15236611 gtagaatctatgaggaggataccaaagctcattataaggttatgagtgag--aagaggaacaaaggccaacaaggtcgtcctaagccctatagtgctcct 15236514  T
Q  99 gctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccaca 198  Q
    |||||||| || | ||| ||| | ||||||||||||||||| || |  | ||||| |||||||||||| ||||| |  |||||||| || || |||||||    
T  15236513 gctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagtgtggtgaaaagggccaca 15236414  T
Q  199 agagtaacgtttgta 213  Q
    ||||||| |||||||    
T  15236413 agagtaatgtttgta 15236399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 13317558 - 13317843
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagagg--taagggacagcaaagtcgtcctaagccgtacagtgcccct 98  Q
    ||||||| || |||||||| || || ||||| ||||||| |||||| |||  ||||||  |||||| |||   ||||| || ||||| |||||||| |||    
T  13317558 gtaggatatatgaggaggatacaaaggctcactataaggcgatgagcgag--aagaggaataagggccagagtagtcgcccgaagccctacagtgctcct 13317655  T
Q  99 gctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccaca 198  Q
    |||||||| || |  || | | | ||||||||||||||||| |    |||||||||||||| |||  | |||||||  |||||||| |  ||||||||||    
T  13317656 gctgacaaaggaaaacaaatattaaatgatgagaggaggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcaaaaggccaca 13317755  T
Q  199 agagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    | ||||| ||||| ||||| |||||||||||||| ||||| |||||||| || |||||  | ||||| |||||||||||||| |||||    
T  13317756 aaagtaatgtttgcaccaaagatgagaagaagtgtttcagatgtggtcaaaaaggtcatgttttagcggattgcaagcgtggggatgt 13317843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 11949107 - 11949199
Alignment:
Q  194 ccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||| |||||||| || |||||||||||||||||||| ||||||||||| || ||| | ||||||||||| ||||| || |||||    
T  11949107 ccacaagagtaatgtttgtactaaagatgagaagaagtgcttcagatgtggtcagaaaggacacatattagctgattgtaagcggggagatgt 11949199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 284
Target Start/End: Original strand, 15008695 - 15008853
Alignment:
Q  123 aatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatg 222  Q
    |||||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| |||| ||||||||||||||| |||||   ||| | ||    
T  15008695 aatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagtgtggtgagagaggccacaagagtaatgtttg---caatggtg 15008791  T
Q  223 agaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    || ||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||||||    
T  15008792 aggagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggtgat 15008853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6603862 - 6603757
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||    
T  6603862 gtaggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgc 6603763  T
Q  101 tgacaa 106  Q
    ||||||    
T  6603762 tgacaa 6603757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 3689068 - 3688960
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  3689068 aggatctacgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 3688969  T
Q  103 acaagggta 111  Q
    |||||||||    
T  3688968 acaagggta 3688960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 6597180 - 6597077
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  6597180 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 6597081  T
Q  103 acaa 106  Q
    ||||    
T  6597080 acaa 6597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 13255815 - 13255712
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| |||||||| || ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  13255815 aggatctacgaagaggacacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 13255716  T
Q  103 acaa 106  Q
    ||||    
T  13255715 acaa 13255712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 16638898 - 16638795
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  16638898 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 16638799  T
Q  103 acaa 106  Q
    ||||    
T  16638798 acaa 16638795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 16753706 - 16753809
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  16753706 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcatagtcgtcctaagccgtacagtgcccccgctg 16753805  T
Q  103 acaa 106  Q
    ||||    
T  16753806 acaa 16753809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 43165800 - 43165697
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  43165800 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 43165701  T
Q  103 acaa 106  Q
    ||||    
T  43165700 acaa 43165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 10008671 - 10008625
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  10008671 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10008625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 10909281 - 10909235
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  10909281 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 19727825 - 19727679
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    |||||||||| ||| ||||| |||||||| |||||||| ||||| |  || ||| | ||||||||||||||||| || | || ||||| |  ||||||||    
T  19727825 cagcaaagtcttccaaagccttacagtgctcctgctgataagggcaaacaaagattgaatgatgagaggaggcctaaaaagaaagatgttgttgctgaga 19727726  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | ||||| | ||  ||||| ||||||||||| |||||||||| ||||    
T  19727725 ttgtttgctatacttgtggtgagaaaggccataagagtaacgcttgt 19727679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 12508559 - 12508692
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||| |||| || ||||||||||| ||||  ||||||||| | | ||||||| | |||||||||||||| ||||| |||||||| || ||||| |    
T  12508559 atctatgagaaggatacgaaagctcattacaaggctatgagtgagaggaaaggtaagagtcagcaaagtcgtccaaagccttacagtgctccggctgata 12508658  T
Q  106 agggtaggcagagacttaatgatgagaggaggcc 139  Q
    |||||  ||||||  | |||||||||| ||||||    
T  12508659 agggtgagcagagggtgaatgatgagaagaggcc 12508692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 5421935 - 5422043
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  |||  ||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  5421935 aggatctatgaggaggataccaaggctcactacaaggtagtgaacgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 5422034  T
Q  103 acaagggta 111  Q
    |||| ||||    
T  5422035 acaaaggta 5422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 11861483 - 11861208
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    |||| ||||| ||||| |||||||| |||||||| |||||  ||| |||| | ||||| |||||| || || ||||  |||||||| || ||||||||||    
T  11861483 gtagaatctatgaggaagacaccaaggctcattacaaggttgtgaatgagtggaagag-taagggccaccagagtcaccctaagccctatagtgcccctg 11861385  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| || || |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| || | ||| || ||||| ||||||||||||||    
T  11861384 ctgataaaggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctatttcaattgtggtgagaaaggccacaa 11861285  T
Q  200 gagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagc 276  Q
    ||| || |||||| |  |||| | |||||| || ||| |||||||| ||||||||||    ||||||||||||||||    
T  11861284 gagcaatgtttgtccagaggaggtgaagaaatgtttctggtgtggtaagaagggtcatactttagctgattgcaagc 11861208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 20059116 - 20059159
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20059116 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 20059159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 48428572 - 48428469
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  48428572 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 48428473  T
Q  103 acaa 106  Q
    ||||    
T  48428472 acaa 48428469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 2037025 - 2037111
Alignment:
Q  125 tgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  2037025 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 2037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 2040766 - 2040852
Alignment:
Q  125 tgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  2040766 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 2040852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 284
Target Start/End: Complemental strand, 12501914 - 12501780
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    |||| ||||||||||||    ||||| || ||||||||||||||||||||||| || |||||| |  |||| |  ||||| || ||| |||||||  |||    
T  12501914 gatgttcctgctgagattacctgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttccggtgtggcaaga 12501815  T
Q  250 agggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||||||   |||||||||||||||| |||||||    
T  12501814 agggtcacacattagctgattgcaagcatggtgat 12501780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 12889777 - 12889731
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  12889777 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 12889731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 14039762 - 14039676
Alignment:
Q  125 tgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  14039762 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 14039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 15586454 - 15586500
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15586454 aagggacaacaaagtcgtcctaagccgtacagtgcccccgctgacaa 15586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 23079166 - 23079228
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||| || ||||||    
T  23079166 gatgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgt 23079228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 23414861 - 23415001
Alignment:
Q  72 agtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagttt 171  Q
    ||||| |||||||| || |||||||||||||| ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| || |    
T  23414861 agtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtct 23414960  T
Q  172 gttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    |||| || | |||||||||||||||||||||||| ||||||    
T  23414961 gtttcaactatggcgagaaaggccacaagagtaatgtttgt 23415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 15345307 - 15345358
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||| ||||    
T  15345307 aagggacagcagagtcctcctaagccgtacagtgcccccgctgacaaaggta 15345358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 15399580 - 15399623
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  15399580 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 15399623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 15713118 - 15713161
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  15713118 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 15713161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 2245662 - 2245712
Alignment:
Q  2 taggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg 52  Q
    |||||| || ||||| || ||||||||||||||||||||||||||||||||    
T  2245662 taggatttatgaggatgataccaaagctcattataaggtgatgagtgagcg 2245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 12843105 - 12843307
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| || || |||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||| ||||  || ||||| |||||||    
T  12843105 aggatttatgaggaggatactaaggctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtccaaagctttatagtgctcctgctg 12843204  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||| |  |||||| | | |||||||||| |||| |  | || ||||||||||| |||||| || || | ||  ||||| |||||||||||||||||    
T  12843205 ataagggcaaacagagaatgattgatgagaggcggcctaggaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagag 12843304  T
Q  203 taa 205  Q
    |||    
T  12843305 taa 12843307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 15066052 - 15065990
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||||||| ||| || |||||||| ||||| ||||||||||||||||| || ||||||    
T  15066052 gatgctcctgctgcgattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15065990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 53382024 - 53382118
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccc 97  Q
    |||||||| ||| |||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| ||||||||||||||||||||||||||    
T  53382024 aggatctatgagaaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccc 53382118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 26790475 - 26790512
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccc 97  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26790475 aagggacagcagagtcgtcctaagccgtacagtgcccc 26790512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 24186258 - 24186222
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgccc 96  Q
    ||||||||||| |||||||||||||||||||||||||    
T  24186258 aagggacagcagagtcgtcctaagccgtacagtgccc 24186222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 15262755 - 15262556
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| |||||||| || || |||||||| |||||  ||| |||||| | ||| || |  || ||||||||||| ||||| ||||  || |||||||| |    
T  15262755 atctatgaggaggatactaaggctcattacaaggttgtgaatgagcggaaaggcaaagatcaacaaagtcgtccaaagccttacaacgctcctgctgata 15262656  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||  || ||| | ||||||||||||||||  |  | || ||||||||||| |||||| || || | ||  ||||| ||||||||| | ||||||||    
T  15262655 agggtaaacaaagaatgaatgatgagaggaggcgtagaaggaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggctataagagtaa 15262556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 15359120 - 15359077
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||    
T  15359120 aagggacagcagagtcgccctaagccgtacagtgcccccgctga 15359077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 17497672 - 17497617
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||| ||||| || |||||||  ||||| ||||||||||||||||||||    
T  17497672 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaa 17497617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 16695145 - 16695083
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    |||||||| ||||||||   |||||| || |||||||||||||||| ||||||||| ||||||    
T  16695145 gatgctccagctgagattacttgtttcaattgtggcgagaaaggccgcaagagtaatgtttgt 16695083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 10417225 - 10417313
Alignment:
Q  192 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |||||||||||||| | ||| ||  | ||||||||||| || ||||| || |||||||| |||||  |||| || ||||||||||||||    
T  10417225 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggcggattgcaagcgtgg 10417313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 14873734 - 14873786
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| ||||||||| || |||||||| ||||| ||||||||||| |||||    
T  14873734 gatgctcatgctgagattgtctgttttaattgtggtgagaaaggccataagag 14873786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 14145160 - 14144877
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14145160 aggatctatgaggagggcaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 14145061  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14145060 acaagggtaagcagagacttaatgatgagaggaggccatataggagagatgctcctgctgagatagtttgttttaagtatggcgagaaaggccacaagag 14144961  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  14144960 taacgtttgtaccaaggaggagaagaagtgcttcaggtgtggtcaaaagggtcacgtgttagctgattgcaagcgtggtgatgt 14144877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 18050701 - 18050986
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||||| ||||| ||  |    
T  18050701 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgctccgac 18050800  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  18050801 tgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaag 18050900  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  18050901 agtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 18050986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 14283124 - 14283407
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||   |||||||||||| ||||| || |||||||| |||||||||||||    
T  14283124 aggatctatgaggaggacactaaagctcattacaaggtgatgagtgagagaaggaataagggacagcagagtcgcccgaagccgtatagtgcccctgctg 14283223  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||||| ||||||||| |||||||||||||||||   || ||||||||||||||||||| | |||||||  ||||||||||||||||||||||||||    
T  14283224 ataagggtaagcagagactcaatgatgagaggaggcccgttaggagagatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagag 14283323  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  14283324 taatgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgcaagcgtggtgatgt 14283407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 11385200 - 11385426
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||| ||||||||||||| || ||||||||||| || |||| ||||||||||||||||||||||||||||||||| | |||  |||| |    
T  11385200 aaagctcattacaagatgatgagtgagcggaggggtaagggacaacagagtcatcctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 11385299  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||| ||||| || | ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  11385300 atgatgagagaaggcccaagaggagagatgctcctgctgagatagtttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatga 11385399  T
Q  224 gaagaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||||||||||||||||    
T  11385400 gaagaagtgcttcaggtgtggtcagaa 11385426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 15099364 - 15099603
Alignment:
Q  14 ggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtagg 113  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| | |||||| ||||| |||||||||||||||| |    
T  15099364 ggaggacacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgacgccgtatagtgctcctgctgacaagggtaag 15099463  T
Q  114 cagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgta 213  Q
    |||||  | ||||||| ||||||||| || | ||||||||||||| |||| |||||||| || |||||||| |||||||||||||||||||||||||||     
T  15099464 cagaggttaaatgatgggaggaggcccaagaggagagatgctcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtg 15099563  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
      |  |||||||||||||||||||||||||||||||||||    
T  15099564 atagagatgagaagaagtgcttcaggtgtggtcagaaggg 15099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 27 - 284
Target Start/End: Original strand, 12712437 - 12712694
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||  |||||||||||||| || || || |||||||| || ||||||||||||||||||||||| |||||||  ||||| | |||  |||| ||||    
T  12712437 gctcattccaaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagtgctcctgctggtaagggaaagcaacgactgaatg 12712536  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaa 226  Q
    ||||||| || || ||    |||||  |||||| |||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  12712537 atgagagaagacccaagggaagagacactcctgttgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaa 12712636  T
Q  227 gaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  12712637 gaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaaacgtggtgat 12712694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 19150498 - 19150233
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||| |||||||  |||||||||||||||||||||| ||    
T  19150498 gaggataccaaagctcattacaaggtgatgagtgagcgcataggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagc 19150399  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||  | ||||||||||||||||| || | ||||||||||||| |||| || ||||| || |||||||| |||||||||||||| ||||| || ||| |    
T  19150398 agaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgtgtga 19150299  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     | | ||| ||||||||||||| |||||||||||||| || |||   || |||||||||||||||||    
T  19150298 tcga-gatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 19150233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 20749897 - 20749632
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||| |||||||  |||||||||||||||||||||| ||    
T  20749897 gaggataccaaagctcattacaaggtgatgagtgagcgcataggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagc 20749798  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||  | ||||||||||||||||| || | ||||||||||||| |||| || ||||| || |||||||| |||||||||||||| ||||| || ||| |    
T  20749797 agaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgtgtga 20749698  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     | | ||| ||||||||||||| |||||||||||||| || |||   || |||||||||||||||||    
T  20749697 tcga-gatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 20749632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 12798252 - 12798534
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || ||||| || ||||||| ||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||| |||||    
T  12798252 gtaggatttatgaagaggatacgaaagctctttacaaggtgatgagtgagcgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgc 12798351  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||| | ||||||||||||||||  || | ||||||||||| | |||| || |||||||| ||||||||    ||||||||||||    
T  12798352 tgacaagggtaagcagagattgaatgatgagaggaggctcaagaggagagatgctcatactgatattgtttgtttcaagtgtgg---aaaaggccacaag 12798448  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| |||||| ||| | |||||||||||||||||||||||||||||||| || |||   |||||||||||  ||||||| |||||    
T  12798449 agtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtgagcgtggggatgt 12798534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 26115338 - 26115617
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || || ||||||||||||||||| ||| | ||||||||| | || ||||||||| | || | |||||||||||| |||||||| |||||    
T  26115338 gtagaatctatgaagaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggataacagaatcgtcctaagccttacagtgctcctgc 26115437  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || | |||||   | | |||||| |||||||| || | |||||||||||| |||||||| |||||||  |||||||| |||||||||||||||    
T  26115438 tgacaaaggaaagcagaagatgagtgatgataggaggcccaagaggagagatgctccggctgagattgtttgttacaagtgtggtgagaaaggccacaag 26115537  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| ||||||   |  ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  26115538 agtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 26115617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 15 - 280
Target Start/End: Original strand, 14261008 - 14261273
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || ||||||||||| |||||||| |||||||| | ||||||||||||| | |||||||| |||||||| |||||||||||||||||||||| |     
T  14261008 gaggatacgaaagctcattacaaggtgatcagtgagcgcaaaggtaagggacagtagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagt 14261107  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||||| ||||||||||||||||| ||   |||| |||||||| |||||||  |||| || |||||||| |||||||||||||||||||| ||  || |    
T  14261108 agagactgaatgatgagaggaggcctaaggggagatatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgcgtca 14261207  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     | | ||||||||||||| ||| |||||| ||||||| || |||   || |||||||||||||||||    
T  14261208 tcga-gatgagaagaagtactttaggtgtagtcagaaaggacacacattggctgattgcaagcgtgg 14261273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 26091563 - 26091825
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| ||||||||||| || | |||||    
T  26091563 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 26091662  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  26091663 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 26091762  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  26091763 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 26091825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 40924582 - 40924844
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  40924582 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 40924681  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  40924682 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 40924781  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  40924782 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 40924844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 16947225 - 16947469
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| || ||||| || ||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| || |||||||||||||||||||    
T  16947225 atctatgaagaggatacgaaagctcattacaaggtgatgagtgagagaaggggtaagggacagcagagtcgtcctaaaccatacagtgcccctgctgaca 16947324  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | ||||||| | ||||||||||| ||||| || | |||||||||||| | ||| || |||||||  |||||||| || |||||||||||||||||    
T  16947325 agggaaagcagagaatgaatgatgagagaaggcccaagaggagagatgctccagttgaaattgtttgttacaagtgtggtgaaaaaggccacaagagtaa 16947424  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
     | ||||   |  ||||||| ||||||  | ||||||||||||||    
T  16947425 tgcttgtggtagagatgagaggaagtgtgttaggtgtggtcagaa 16947469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 49155785 - 49155523
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  49155785 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 49155686  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
    |  |   ||| || |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  49155685 ggatgggtgaggataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 49155586  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | ||||||||||||||||||||||||||||||    |||||||| |||||||||||    
T  49155585 agatgataggaagtgcttcaggtgtggtcagaagggtcatagtttagctgaatgcaagcgtgg 49155523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 253
Target Start/End: Complemental strand, 12460127 - 12459877
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||| ||||||||||| ||||||||||||||| | || |||||||||||||| |||||||||||||| |||| ||| | |||||    
T  12460127 aggatatatgaggaagacacaaaagctcattacaaggtgatgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctg 12460028  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||| | | |||||||| |||||||| || | |||||||| |||||||||||| || ||||  |||||||| || ||||||||||||||    
T  12460027 acaagggaaagcagaaaatgaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagag 12459928  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
     || | ||||   |  ||||||| ||| || || |||||||||||||||||    
T  12459927 caatgcttgtggtagagatgagaggaaatgttttaggtgtggtcagaaggg 12459877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 21755896 - 21755634
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    |||| |||||||||||| ||| | ||||||||| | || ||||||||||| |||| |||||||||||| |||||||| ||||||||||| || | |||||    
T  21755896 gacatcaaagctcattacaagataatgagtgagaggaggggtaagggacaacaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 21755797  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | | |||||| | |||||| || | ||||||||||||  ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   ||    
T  21755796 atatgagtgatgacatgaggcctaagaggagagatgctccctctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaa 21755697  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| |||||| ||||||||||||||||||||||||   |||||||| || ||||||||    
T  21755696 agatgagaggaagtgtttcaggtgtggtcagaagggtcacactttagctgaatgtaagcgtgg 21755634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 13024843 - 13024647
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||||||| | || |||||||||||| | | ||||||||| || |||||||| |||||||    
T  13024843 aggatatatgaggaagacaccaaagctcattacaaggtgatgagtgagaggaggggtaagggacagtagaatcgtcctaaaccttacagtgctcctgctg 13024744  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| || | ||||||  | |||||||| |||||||| || | |||||||||||||||||| || |||||||  |||||||| || |||||||||||    
T  13024743 acaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttacaagtgtggtgaaaaaggccacaa 13024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 277
Target Start/End: Complemental strand, 13676899 - 13676676
Alignment:
Q  54 agaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatg 153  Q
    ||||||||  ||||||| |||| |||||| ||||| ||||| ||||||||||| || |  |||||  | ||||||||||||||||| || | ||||||||    
T  13676899 agaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatg 13676800  T
Q  154 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
    |||||| |||||| ||||| |  ||||||||  ||||||||||||||||||| ||||||   || ||||||||||||| |||||||||||| ||||||||    
T  13676799 ctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtacttcaggtgtggacagaaggg 13676700  T
Q  254 tcacttgttagctgattgcaagcg 277  Q
     |||   ||||||||||| |||||    
T  13676699 acacacattagctgattgtaagcg 13676676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 13965433 - 13965695
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    |||||||||||||||||  || | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  13965433 gacaccaaagctcattaccagataatgagtgagaggaggggtaagggacaacataatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 13965532  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | ||||||||||||||||||||| | ||| |  |||||||| ||||||| |||||||||||| ||||||   ||    
T  13965533 agatgggtgatgataggaggcccaagaggagagatgctcctgctgagattgattgctacaagtgtggtgagaaagaccacaagagtaatgtttgtggtaa 13965632  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| |  || |||||||||||||||||||||||||||    ||||||| |||||||||||    
T  13965633 agatgatagaaaatgcttcaggtgtggtcagaagggtcacagtctagctgaatgcaagcgtgg 13965695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12203548 - 12203760
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggta-ag-ggacagcaaagtcgtcctaagccgtacagtgcccct 98  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||||||  |||||| | || || |||||| ||||||||||||| |||||||| |||    
T  12203548 gtagaatctatgaggaggataccaaagttcattataaggttatgagtgag--aagaggaacagaggccagcaaggtcgtcctaagccctacagtgctcct 12203645  T
Q  99 gctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccaca 198  Q
    |||||||| || |  || ||| | |||||||||||||| || || | |||||||| |||||||| ||| ||||| |  |||||||| ||||| |||||||    
T  12203646 gctgacaaagggaaacaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgtgattgtttgctacaagtgtggtgagaagggccaca 12203745  T
Q  199 agagtaacgtttgta 213  Q
    ||||||| |||||||    
T  12203746 agagtaatgtttgta 12203760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 13004940 - 13004783
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||||||||||| || || || |||||||| || |||||||||||||||||||| |||||||||| |||||| | |||  |||| ||||    
T  13004940 gctcattacaaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagcgcccctgctggcaagggaaagcaacgactgaatg 13004841  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtgg 184  Q
    ||||||| || || ||    |||||  ||||||||||||||||||| |||||||||||    
T  13004840 atgagagaagacccaagggaagagacactcctgctgagatagtttgctttaagtgtgg 13004783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 15628021 - 15627811
Alignment:
Q  4 ggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||| |||||||| || ||||||||||| ||||| |||| |||| | | | ||||| | || ||||||||||| ||||| |||||||| ||||||||    
T  15628021 ggatctatgaggaggatacgaaagctcattacaaggttatgaatgagaggaaaagtaagagtcaacaaagtcgtccaaagccttacagtgctcctgctga 15627922  T
Q  104 caagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagt 203  Q
     |||||||  || ||  | |||||||||| |||||| |  | || |||| ||||||||||  | ||||| |  || ||||| ||||||||||||||||||    
T  15627921 taagggtaaacaaagggtgaatgatgagaagaggcctagaaagaaagatactcctgctgaagttgtttgctacaactgtggtgagaaaggccacaagagt 15627822  T
Q  204 aacgtttgtac 214  Q
    |||| ||||||    
T  15627821 aacgcttgtac 15627811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 9591805 - 9591653
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| |||||||| || |||||||||| ||| ||||| | ||||||| |   |||||| ||| |||| || | ||  ||||||||||    
T  9591805 aagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctg 9591706  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | ||||| || ||||| || ||||||||||||||||||||||| || ||||||    
T  9591705 cagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgt 9591653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 15157832 - 15157932
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| || ||||| || || ||||| || |||||  ||| |||| |||  || ||||||||||| |||||||||||||||||||||||||||||||    
T  15157832 aggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 15157931  T
Q  103 a 103  Q
    |    
T  15157932 a 15157932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 10873956 - 10873853
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || | ||||||||| |||||||||||||||||||||||||| ||||    
T  10873956 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaggggacagcagagtcgtcctaagccgtacagtgcccccgctg 10873857  T
Q  103 acaa 106  Q
    ||||    
T  10873856 acaa 10873853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 12690939 - 12690896
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  12690939 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 12690896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 16726211 - 16726422
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| |||| ||||||||| |||||  ||| ||||||||     ||||| ||||| ||||| ||||| || || ||||||||| |    
T  16726211 gtaggatctatgaagaggataccagagctcattacaaggttgtgaatgagcgaaagaccaagggccagcagagtcgccctaaaccttaaagtgcccctac 16726310  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||| ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| || || |||||||| || ||||||| |||||||||||||    
T  16726311 tgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaag 16726410  T
Q  201 agtaacgtttgt 212  Q
    ||||| ||||||    
T  16726411 agtaatgtttgt 16726422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 8711043 - 8710997
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  8711043 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 8710997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 11233988 - 11234088
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  11233988 aggatctacgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 11234087  T
Q  103 a 103  Q
    |    
T  11234088 a 11234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 17703225 - 17703436
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    |||||||||| || ||||| |||| ||||||||| |||||  ||| |||||| ||||   ||||| ||||| ||||| ||||| || || |||||||||     
T  17703225 gtaggatctatgaagaggataccagagctcattacaaggttgtgaatgagcggaagacc-aagggccagcagagtcgccctaaaccttatagtgccccta 17703323  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| || || |||||||| || ||||||| ||||||||||||    
T  17703324 ctgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaa 17703423  T
Q  200 gagtaacgtttgt 212  Q
    |||||| ||||||    
T  17703424 gagtaatgtttgt 17703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 44788126 - 44788226
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| ||||||||||||||||||||||||||| |||    
T  44788126 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctactg 44788225  T
Q  103 a 103  Q
    |    
T  44788226 a 44788226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 11549934 - 11549977
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  11549934 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 11549977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 11984492 - 11984279
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||||||||| || || ||||| |||||||| |||||  ||| |||||| ||||   ||||| ||||| ||||| |||||||| || ||||||||||    
T  11984492 gtaggatctacgaagaagataccaaggctcattacaaggttgtgaatgagcggaagacc-aagggccagcagagtcgccctaagccctatagtgcccctg 11984394  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| |  |||||| |    ||||| ||  |||| || | ||  |||||||| ||||||||   |||||| || ||||| ||||||||||||||    
T  11984393 ctgataagggcaaacagagaatggtcgatgatagacggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgagaaaggccacaa 11984294  T
Q  200 gagtaacgtttgtac 214  Q
    ||| || ||||||||    
T  11984293 gagcaatgtttgtac 11984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 14335834 - 14335788
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  14335834 aagggacagcagagtcgtcctaagccgtacaatgcccccgctgacaa 14335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 18587003 - 18587049
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  18587003 aagggacagcagagtcgtcctaagccgtacaatgcccccgctgacaa 18587049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 13689536 - 13689436
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| || ||||| || || ||||| || |||||  ||| |||| |||  || |||||||| || ||||||||||||||||||||||||||| |||    
T  13689536 aggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagagaaagggcaagggacaccagagtcgtcctaagccgtacagtgcccctactg 13689437  T
Q  103 a 103  Q
    |    
T  13689436 a 13689436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 14957946 - 14957903
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||| |  |||||||||||||||||||||||||||||||    
T  14957946 aagggacagtagggtcgtcctaagccgtacagtgcccctgctga 14957903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 18181184 - 18181138
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| || |||| ||||||||||||||||||||| |||||    
T  18181184 ggtaagggacaacagagtcttcctaagccgtacagtgcccccgctga 18181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 22054438 - 22054155
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22054438 aggatctgtgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacggcagagtcgtcctaagccgtacagtgcccctgctg 22054339  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22054338 ataagggtaagcagagacttaatgatgagaggaggccgaataggagagatgcttctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 22054239  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||    
T  22054238 taatgtttgtaccaaggatgagaagaagtgcttcagatgtggtcagaagggtcaccttttagcggattgcaagcgtggtgatgt 22054155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 271
Target Start/End: Original strand, 22027486 - 22027754
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||    
T  22027486 aggatctatgaggaggacacaaaagatcattataaggtgatgagtgagcgaagtggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctg 22027585  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||| ||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  22027586 acaagggaaagcaaagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatagtttgttacaagtgtggcgataaaggccacaagag 22027685  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattg 271  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  22027686 taatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattg 22027754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 21929005 - 21928719
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||| ||||| ||||| |||||    
T  21929005 gtagaatctatgaagaggataccaaagctcattacaaggtgatgagtgagcgtagaggtaagggacaacagagtcgtcctaaaccgtatagtgctcctgc 21928906  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || |  ||||| || ||||||||||||||||| |  | ||||||||||||| |||||||  ||||||| ||||||||||| || |||||| ||    
T  21928905 tgacaaaggaaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattctttgtttcaagtgtggcgaaaagggccacgag 21928806  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgtc 287  Q
    ||||| ||  || ||| | |||||||||||||| ||||| ||||| ||||| || |||   || | ||||||||||||||||||||||    
T  21928805 agtaatgtaagtgaccga-gatgagaagaagtgtttcagatgtggacagaaaggacacactttgggtgattgcaagcgtggtgatgtc 21928719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 22374446 - 22374163
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||  ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| || ||||| |||||||||||    
T  22374446 gtaggatctatcaggaggatacaaaagctcattataaggtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgcccctgc 22374347  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    || ||| ||||  || ||||||||||| ||||||||||| |  | ||||||| ||||| ||||||| || ||||| |||||||| || |||| |||||||    
T  22374346 tgtcaaaggtaaacaaagacttaatgaggagaggaggcctaggaggagagattctcctactgagattgtctgtttcaagtgtggtgaaaaagaccacaag 22374247  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||| || |||  |   ||||| |||||||| || ||||||||  |||| || |||   ||||||||||||||||||||||||    
T  22374246 agtaatgtatgtgaccgtgatgaaaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgat 22374163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 31413738 - 31413985
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||  |||||||||||||||| |||||||||||||| ||||||||||| || ||||| ||||||||||    
T  31413738 aggatatatgaggaagacaccaaagctcattacaaaatgatgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccttacagcgcccctgctg 31413837  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||| | ||||||||||||||||| || | |||||||||||||| ||| || |||||||| |||||||| || |||||||| |||||    
T  31413838 acaagggaaagcagagaatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccataagag 31413937  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
     || | ||||   |  ||||||| |||||| || ||||||||||||||    
T  31413938 caatgcttgtggtagagatgagaggaagtgttttaggtgtggtcagaa 31413985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 19985757 - 19985472
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || ||||| |||||||||||||| ||||||||||||||||| || || |||||| |||| |||||||| |||||||| |||||||||||    
T  19985757 gtaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgcagtggcaagggatagcagagtcgtccgaagccgtatagtgcccctgc 19985658  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
     ||||||||||  |||||  | | ||||||||||||||| || | ||||||||||||| ||||||| |||||||| ||||||||||| ||| ||||||||    
T  19985657 ggacaagggtaaacagaggatgattgatgagaggaggcctaagaggagagatgctcctactgagattgtttgtttcaagtgtggcgaaaaaagccacaag 19985558  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| || |||  |   |||||||||||||  ||||| ||||| |||||  | |||   ||||||||||||||| |||| |||||    
T  19985557 agtaatgtatgtgaccgtgatgagaagaagtatttcagatgtggacagaaatgacacacattagctgattgcaagagtggggatgt 19985472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 28984488 - 28984209
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || || ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| |||||    
T  28984488 gtaggatttatgaagaagacaccaaagctcattacaagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgc 28984389  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
     |||||||| | ||||||  |   |||||| |||||||| || | |||||||||||| | |||||| |||||||  |||||||| |||||||||||||||    
T  28984388 ggacaagggaaagcagaggatgggtgatgataggaggcccaagaggagagatgctccagttgagattgtttgttacaagtgtggtgagaaaggccacaag 28984289  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| ||||||   |  ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  28984288 agtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 28984209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 16268445 - 16268683
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||  | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| | ||||||||| || | |||||    
T  16268445 gacaccaaagctcattacaatataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcttgctgacaaaggaaagcaga 16268544  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | | |||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| |||||||||||||||||||| ||||||   ||    
T  16268545 agatgagtgatgacaggaggcctaagaagagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaa 16268644  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtca 256  Q
     ||||||| ||||||||||||||||||||||||||||||    
T  16268645 agatgagaggaagtgcttcaggtgtggtcagaagggtca 16268683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 29300632 - 29300831
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||||| ||||||||||| ||||| ||||||||| | || |||||||||||  | ||||||||||| || |||||||| |||||||    
T  29300632 aggatatatgaggaggacacaaaagctcattacaaggtaatgagtgagaggaggggtaagggacattagagtcgtcctaaaccttacagtgctcctgctg 29300731  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || | |||||   | |||||||| |||||||| || | | |||||| ||| ||||| || ||||||||||||||||| || | ||||||||||||    
T  29300732 acaaagggaagcagaagatgaatgatgataggaggcccaagaggggagatgttcccgctgaaattgtttgttttaagtgtggtgaaagaggccacaagag 29300831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 20391649 - 20391454
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||||||||| ||||||||||| ||    || || |||||| ||||||| ||||| |||||||| ||||||||||| || |  |    
T  20391649 gaggataccaaagctcattataaggttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgctcctgctgacaaagggaaac 20391550  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgttt 210  Q
    | ||| | |||||||||||||| || || |  ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||||||| ||||    
T  20391549 aaagattgaatgatgagaggagacctaagagtagagatgttccttctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgttt 20391454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 22524075 - 22523883
Alignment:
Q  13 aggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtag 112  Q
    ||||||| || || |||||||| ||| |  ||| |||||||| ||| || || ||||| |||||||| ||||| ||||||||||||||||| ||||| |     
T  22524075 aggaggatactaaggctcattacaagattgtgaatgagcgaaaaggcaaaggtcagcagagtcgtccaaagccttacagtgcccctgctgataagggaaa 22523976  T
Q  113 gcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
     || ||| |||||||||||||| |||| |  | || ||||||||||| |||||| || || | ||  ||||||||||||||||||| ||||||    
T  22523975 acaaagagttaatgatgagaggcggcctaggaagaaagatgctcctgttgagattgtgtgctatacttgtggcgagaaaggccacaggagtaa 22523883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 19481335 - 19481389
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  19481335 ggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggta 19481389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 30310353 - 30310559
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgac 104  Q
    |||||||||||||| || || |||||||| |||||  ||| |||||| ||||   ||||| ||||| ||||| ||||| || || ||||||||||||||     
T  30310353 atctacgaggaggatactaaggctcattacaaggttgtgaatgagcggaagacc-aagggtcagcagagtcgccctaaaccttatagtgcccctgctgat 30310451  T
Q  105 aagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagta 204  Q
    ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| || || |||||||| || |||||||||||||||||||||||||    
T  30310452 aagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgagaaaggccacaagagta 30310551  T
Q  205 acgtttgt 212  Q
    | ||||||    
T  30310552 atgtttgt 30310559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 19115972 - 19115872
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||||||||    
T  19115972 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 19115873  T
Q  103 a 103  Q
    |    
T  19115872 a 19115872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 20015472 - 20015572
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||||||||    
T  20015472 aggatctacgaagaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 20015571  T
Q  103 a 103  Q
    |    
T  20015572 a 20015572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 17671288 - 17671339
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  17671288 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 17671339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 22117441 - 22117478
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccc 97  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22117441 aagggacagcaaagtcgtcctaagccgtacagtgcccc 22117478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 6606684 - 6606952
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || || |||||||||||||| | ||||||||| ||    ||||| |||||| | ||||| ||||| |||||||  |||  |||||  ||      
T  6606684 gaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggacgtccgaagccctacagtgttcctattgacagaggag 6606783  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     ||| ||| | |||||||||||||| || || |  ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  6606784 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 6606883  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     |     || ||||||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||    
T  6606884 caatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtgg 6606952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 15536901 - 15536749
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| |||||||| || ||||||||||| || ||||| | ||||||| |    ||||| ||| |||| || | ||  |||||||||     
T  15536901 aagggccagcagagtcgccctaagccttatagtgcccctgccgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcctt 15536802  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | |||||  |||||||||| ||||||||  |||||||||||||||| ||||||    
T  15536801 cggagattatttgttttaattgtggcgaagaaggccacaagagtaatgtttgt 15536749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 21163883 - 21163935
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||||||||| || |||||||| ||||||||||||| |||||||||    
T  21163883 gatgctcctgctgagattgtctgttttaattgtggcgagaaagaccacaagag 21163935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 32603722 - 32603511
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||||||||| ||||| |||| ||||||||| |||||  | | |||| | ||||  |||||| ||||| ||||| |||||||| || ||||||||||    
T  32603722 gtaggatctacgaagaggataccagagctcattacaaggttgttaatgagaggaagac-taagggccagcagagtcgccctaagccttatagtgcccctg 32603624  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| | ||||||| |    ||||| ||| | || || | ||  ||||||||| | || || |||||||| || ||||| | ||||||||||||    
T  32603623 ctgataagggcaagcagagaatggtcgatgataggcgacctaagaagaaggatgctccttcggaaattgtttgtttcaactgtggtgggaaaggccacaa 32603524  T
Q  200 gagtaacgtttgt 212  Q
    |||||| ||||||    
T  32603523 gagtaatgtttgt 32603511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 18860092 - 18860049
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  18860092 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 18860049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 21391214 - 21391269
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||||||||| |||||||||   ||||| ||||||||||||||||||||    
T  21391214 gatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaa 21391269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 21780540 - 21780595
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||||||||| |||||||||   ||||| ||||||||||||||||||||    
T  21780540 gatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaa 21780595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 22126225 - 22126268
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  22126225 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 22126268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 21672033 - 21671982
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||| ||||| |||||||||||||| |||||||| |||||||| |||||||    
T  21672033 aagggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggta 21671982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 3274629 - 3274550
Alignment:
Q  54 agaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagagg 134  Q
    |||||||| || |||||||||||||| ||||| |||||||| ||||| || ||||||  ||||||  | ||||||||||||    
T  3274629 agaggtaaaggccagcaaagtcgtccaaagccttacagtgctcctgc-gataagggtgagcagagggtgaatgatgagagg 3274550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 9553 - 9836
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  9553 aggatctatgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctg 9652  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||||| || ||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9653 ataagggtaagctgagacttaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 9752  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  9753 taatgtttgtaccaaggatgagaagaagtgcttcaggtgtggttagaagggtcaccttttagcggattgcaagcgtggtgatgt 9836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 203919 - 203636
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  203919 aggatctatgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 203820  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||||||||| |||||||||||||||||   || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  203819 acaagggtaagcagagactgaatgatgagaggaggcccgttaggagagatgctcctggtgagatagtttgttttaagtgtggcgagaaaggccacaagag 203720  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||  |||||||||    
T  203719 taatgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcaccttttagcggattgcaaggatggtgatgt 203636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 424843 - 424746
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||| |||||||| ||||| |||||||| ||| || ||| |||||| |  || ||||||||||| ||||||||||||||||||| ||||||||||||    
T  424843 atctatgaggaggataccaaggctcattacaagatggtgaatgagcggaagggcaagggacagcatagtcgtcctaagccgtacaatgcccctgctga 424746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 263764 - 263481
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  263764 aggatctatgaggaggacaccaaagttcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcttaagccgtacagtgcccctgctg 263665  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||||||||| |||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  263664 acaagggtaagcagagactgaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 263565  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||  |||||||||    
T  263564 taatgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcaccttttagcggattgcaaggatggtgatgt 263481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 280
Target Start/End: Original strand, 6023 - 6300
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  6023 aggatttatgaggaggacaccaaagctcattataaagtgatgagtgaacgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctg 6122  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  6123 acaagggtaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctgtcgagatagtttgttttaagtgtggcgagaaaggccacaagag 6222  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  6223 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgctagctgattgtaagcgtgg 6300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 17266277 - 17266562
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||| ||||| |||||||||||    
T  17266277 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaaagggcatcagagtcgtcctaaaccgtatagtgcccctgc 17266376  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17266377 tgacaagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgttttaagtgtggcgagaaaggtcacaag 17266476  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  17266477 agtaacgtttgtaccgaggatgagaagaagtgcttcaggtgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 17266562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 212
Target Start/End: Original strand, 21870235 - 21870432
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||    
T  21870235 gaggataccaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagc 21870334  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||| | | ||||||| ||||||||| || | ||||||||||||| |||||||| |||| || |||||||| ||||||| |||||||||||| ||||||    
T  21870335 agaaattgaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgtttgt 21870432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 212
Target Start/End: Original strand, 21874515 - 21874712
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||    
T  21874515 gaggataccaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagc 21874614  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||| | | ||||||| ||||||||| || | ||||||||||||| |||||||| |||| || |||||||| ||||||| |||||||||||| ||||||    
T  21874615 agaaattgaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgtttgt 21874712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 22506087 - 22505856
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| ||||||||||| || | |||||    
T  22506087 gacaccaaagctcattataagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 22505988  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| ||||||||||||||||| || ||||||   ||    
T  22505987 agatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaa 22505888  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcaga 249  Q
     || |||| |||||||||||||||||||||||    
T  22505887 agacgagaggaagtgcttcaggtgtggtcaga 22505856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 23563113 - 23563360
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||||| ||||||||||| ||| |||||||||| || ||||||||||||||| | ||| |||| |||||||| ||||| |||||||    
T  23563113 aggatttatgaggaggacactaaagctcattacaagatgatgagtgaacgtagaggtaagggacagaagagttgtccgaagccgtatagtgctcctgctg 23563212  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | |||| || ||||||  | ||| ||||||||||||| || | ||||||||||||| |||| || ||||| || |||||||| || ||||||||||||||    
T  23563213 aaaaggataagcagaggttaaataatgagaggaggcccaagaggagagatgctcctactgacattgtttgcttcaagtgtggtgaaaaaggccacaagag 23563312  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||| || |||   |  ||||||||||||||||||||||||||||||||    
T  23563313 taatgtctgtgatagagatgagaagaagtgcttcaggtgtggtcagaa 23563360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 14883951 - 14884213
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||| ||||||| || | |||||    
T  14883951 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcaga 14884050  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
    |  |   |||||| |||||||| || | |||||||||||| |||||||| |||||||  |||||||| |||||||||||||||||||| || |||   |     
T  14884051 ggatgggtgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtctgtgggag 14884150  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   || ||||| |||||||||||    
T  14884151 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttggctgaatgcaagcgtgg 14884213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 20345696 - 20345451
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||| ||||||||||||||||| ||| | ||||||||| | || |||||||||||| | | |||||||||||| || ||||| ||||||||||| || |    
T  20345696 gaggaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagtagaatcgtcctaagccttatagtgctcctgctgacaaaggaa 20345597  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     |||||   |   |||||| |||||||| || | ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||||||| |||||    
T  20345596 agcagaagatgggtgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaagcccacaagagtaatgtttg 20345497  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcac 257  Q
    |   || ||||| | |||||||||||||||||||||||||||||||    
T  20345496 tggtaaagatgataggaagtgcttcaggtgtggtcagaagggtcac 20345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 25851480 - 25851241
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| ||||||||||| || | |||||    
T  25851480 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 25851381  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | ||||||||||| || |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   ||    
T  25851380 agatgggtgatgataggaggcccaagaggagagatgctcttgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaa 25851281  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcac 257  Q
     ||||| | |||||||||||||||||||||||||||||||    
T  25851280 agatgataggaagtgcttcaggtgtggtcagaagggtcac 25851241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 23077850 - 23078097
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||||| ||||||||| | || |||||||||||||| ||||||||||| || |||||||| |||||||    
T  23077850 aggatatatgaggaagacaccaaagctcattacaaggtaatgagtgagaggaggggtaagggacagcagagtcgtcctaaaccttacagtgctcctgctg 23077949  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || | |||||   | |||||||| |||||||| || | ||||||||||||||||||||| || ||||| |||||||| || ||||||||||| ||    
T  23077950 acaaagggaagcagaagatgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtatgtttcaagtgtggtgaaaaaggccacaaaag 23078049  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
     || | ||||   |  ||||||| ||| || |||||||||||||||||    
T  23078050 caatgcttgtggtagagatgagaggaaatgtttcaggtgtggtcagaa 23078097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 21983131 - 21983324
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || ||||||||||||||| | ||||||||||| ||    || || |||||| ||||||| ||||| |||||||  ||||||||||| || |    
T  21983131 gaggaggatacgaaagctcattataagtttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgttcctgctgacaaaggga 21983230  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
     ||| ||| | |||||||||||||| || || |  ||||||| |||||||||||| ||||| | || |||||| ||||| ||||||||||||||    
T  21983231 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgctataggtgtggtgagaagggccacaagagtaa 21983324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 23670057 - 23669774
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| ||||||||||| || |||||||| |||||||  | || |||||| ||    ||||| || ||| |||| || ||||| |||||||| ||||     
T  23670057 gtaggatttacgaggaggatacgaaagctcactataaggctaggaatgagcggaggaacaagggtcaacaaggtcgaccgaagccctacagtgctcctgt 23669958  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||   ||| ||| | |||||||||||||| || || | ||||||||||||||||||||| ||||  |   ||||||| |||||||||||||||    
T  23669957 tgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgctcctgctgagattgtttcctaccagtgtggtgagaaaggccacaag 23669858  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||| ||||| |     || ||||||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||||||    
T  23669857 agtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggtgat 23669774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 27521844 - 27521741
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| || |||||||| || ||||| || |||||  ||| |||| | |  |||||||||||||| |||||||||||||||||||||||||||||||    
T  27521844 aggatctatgaagaggacacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 27521745  T
Q  103 acaa 106  Q
    ||||    
T  27521744 acaa 27521741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 21560979 - 21561172
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || ||||| | ||||||||| ||||||||| | ||    || || |||||| ||||||| ||||| ||||||||  |||||||||| || |    
T  21560979 gaggaggatacgaaagcccgttataaggttatgagtgagaggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgctactgctgacaaaggga 21561078  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
      || ||| | |||||||||||||| || || |  ||||||| |||||||||||| ||||| || ||||||||  |||| ||||||||||||||    
T  21561079 aacaaagattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgcttcaagtgtggtaagaagggccacaagagtaa 21561172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 27682348 - 27682448
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| || |||||  ||| |||| |||  || ||||||||||| |||||||||||||||||||||||||||||||    
T  27682348 aggatctacgaagaggatacgaaggctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 27682447  T
Q  103 a 103  Q
    |    
T  27682448 a 27682448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 16359940 - 16359837
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  16359940 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 16359841  T
Q  103 acaa 106  Q
    ||||    
T  16359840 acaa 16359837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 34569932 - 34569829
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  34569932 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 34569833  T
Q  103 acaa 106  Q
    ||||    
T  34569832 acaa 34569829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 18782408 - 18782346
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  18782408 gatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 18782346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 23474611 - 23474499
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||| | | ||| ||||| |||||||||||||| ||||| |||| ||| |||||||| ||||||| ||| ||| | ||||    
T  23474611 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacattgctcctgctgataagggtaagcaaagattgaatg 23474512  T
Q  127 atgagaggaggcc 139  Q
    |||||||||||||    
T  23474511 atgagaggaggcc 23474499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 40712218 - 40712110
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  40712218 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 40712119  T
Q  103 acaagggta 111  Q
    |||| ||||    
T  40712118 acaaaggta 40712110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 14996744 - 14996787
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  14996744 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 14996787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 22138049 - 22138006
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  22138049 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 22138006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 22329892 - 22329935
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  22329892 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 22329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 27665508 - 27665559
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  27665508 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 27665559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 43122892 - 43122609
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| ||||||||||| || |||||||| |||||||| | || |||||| ||    ||||| || |||  ||| || ||||| |||||||| | ||     
T  43122892 gtaggatttacgaggaggatacgaaagctcactataaggttaggaatgagcggaggaacaagggtcaacaagatcggccgaagccctacagtgctcatgt 43122793  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||   ||| ||| | |||||||||||||| || || | |||||||| || ||| ||||| ||||| |  |||||||||||||  |||||||||    
T  43122792 tgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgttcatgcagagattgtttgctacaagtgtggcgagaggggccacaag 43122693  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||| || || |     || ||||||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||||||    
T  43122692 agtaatgtctgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatgcgatagctgaatgcaagcgtggtgat 43122609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 16258103 - 16258189
Alignment:
Q  125 tgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  16258103 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 16258189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 22591822 - 22591908
Alignment:
Q  125 tgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  22591822 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22591908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 22595377 - 22595463
Alignment:
Q  125 tgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  22595377 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22595463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 284
Target Start/End: Complemental strand, 23461400 - 23461131
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtagg 113  Q
    |||||||||||||||||||| |||||  ||| |||||| ||||  |||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |      
T  23461400 gaggacaccaaagctcattacaaggttgtgaatgagcggaagac-taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggaaaa 23461302  T
Q  114 cagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgta 213  Q
     ||||| |    ||||| ||| |||| || | ||  ||||||||||| || || || | ||| || ||||| ||||||||||||||||| || ||||||     
T  23461301 tagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggaaattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtc 23461202  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    |  |||| | |||||| || ||| |||||||  ||||| ||||    |||||||| ||||||| |||||||    
T  23461201 cagaggaggtgaagaaatgtttccggtgtggcaagaagagtcatactttagctgaatgcaagcatggtgat 23461131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 20779147 - 20779059
Alignment:
Q  192 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |||||||||||||| | ||| ||| | ||||||||||| || ||||| || ||||||||||||||  |||| ||||| |||||||||||    
T  20779147 ggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggctgaatgcaagcgtgg 20779059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 23526345 - 23526293
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  23526345 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagag 23526293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 19773341 - 19773298
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  19773341 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 19773298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 21883160 - 21883017
Alignment:
Q  59 taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcct 158  Q
    |||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |  |||||| |    || || ||  ||||||  | || ||||| | ||    
T  21883160 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgaggatagacggccgaggaagaaagatgtttct 21883061  T
Q  159 gctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  21883060 gctgagattgtctgttttaattgtggcgagaaaggccacaagag 21883017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 27613737 - 27613694
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  27613737 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 27613694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 41774223 - 41774180
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  41774223 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 41774180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 21410560 - 21410366
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | |||| |||||| || ||||||   || |||||||||  ||| || |||||||| || ||||| ||||||| ||| |    
T  21410560 gacaccaaagctcattataagattatgaatgagcggaggggtaagcaccaacaaagtcgtggtaaaccttacagtgctccagctgataagggtaagcata 21410461  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    |  | |||||| |||||||||| |  | ||||||| ||||| ||||  | || |||||    ||||| |||||||| || |||||||||| ||||    
T  21410460 gggtgaatgataagaggaggcccagaaagagagatactcctactgaagttgtgtgtttccgatgtggagagaaaggtcataagagtaacgcttgt 21410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 21331997 - 21332125
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||| ||||| |||||||| |||||||| ||||| |  || ||| ||||||||||||| ||||| |  | || |||||||| || |||||    
T  21331997 cagcagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagagaaggcctagaaagaaagatgctcatgttgaga 21332096  T
Q  166 tagtttgttttaagtgtggcgagaaaggc 194  Q
    | || || | ||  |||||||||||||||    
T  21332097 ttgtgtgctatacttgtggcgagaaaggc 21332125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 214
Target Start/End: Original strand, 21631407 - 21631555
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    |||||||||||||| ||||| |||||||| |||||||| |||||||  || ||  | ||||||| ||||||||| |  | || |||| || ||||||||     
T  21631407 cagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaaacaaagggtgaatgatgtgaggaggcctagaaagaaagatactactgctgagg 21631506  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
    | ||||| |  |  ||||| ||||||||||||| |||||| | ||||||    
T  21631507 ttgtttgctacacttgtggtgagaaaggccacacgagtaatgcttgtac 21631555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 22465184 - 22465096
Alignment:
Q  192 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |||||||||||||| | ||| | | | ||||||||||| || ||||| || ||||||||||||||  |||| ||||| |||||||||||    
T  22465184 ggccacaagagtaatgcttgcatccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtgg 22465096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 22351300 - 22351257
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  22351300 aaggggcagcagagtcgtcataagccgtacagtgcccctgctga 22351257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 26735736 - 26735875
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||| ||||| |||||||| ||| |||| || || |  || ||| ||||||||||||||||||| |  | || ||||||||||| |||||    
T  26735736 cagcagagtcgtccaaagccttacagtgctcctactgataaaggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctgttgaga 26735835  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | ||||| |  |  ||| | ||||||||||| ||||||||    
T  26735836 ttgtttgctacacttgttgtgagaaaggccataagagtaa 26735875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 29473078 - 29473121
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||    
T  29473078 aagggacagcagagtcgtcctaagccgtacagtgtccccgctga 29473121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 37288501 - 37288544
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||| || |||||    
T  37288501 aagggacagcagagtcgtcctaagccgtacagtgctcccgctga 37288544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 12577495 - 12577210
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| ||||| |||||||| ||    
T  12577495 gtaggatctacgaggaggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggc 12577396  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  12577395 tgacaagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaag 12577296  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  12577295 agtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 12577210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 19716320 - 19716603
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| || ||    
T  19716320 aggatatatgaggaagacactaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttg 19716419  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||| | ||||||||||||||||| |||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  19716420 acaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagag 19716519  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| |||||||| || |||||||||||||| ||||||||||||||||| || |||    ||||||||||||||||| |||||||    
T  19716520 taatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgt 19716603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 19720883 - 19721166
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| || ||    
T  19720883 aggatatatgaggaagacactaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttg 19720982  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||| | ||||||||||||||||| |||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  19720983 acaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagag 19721082  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| |||||||| || |||||||||||||| ||||||||||||||||| || |||    ||||||||||||||||| |||||||    
T  19721083 taatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgt 19721166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 23097324 - 23097568
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||||||||| ||  | ||||||||||| ||||||||||||||||| |||||||| | ||| || ||||  ||||||||||||||||||||||||||||    
T  23097324 atctacgaggaagattcaaaagctcattacaaggtgatgagtgagcggagaggtaaagcacatcagagtctccctaagccgtacagtgcccctgctgaca 23097423  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | |||  |||| ||||||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  23097424 agggaaagcaacgactgaatgatgagaggaggcccaagaggagagatgctcctgctgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaa 23097523  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
     ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  23097524 tgtttgtaccaaagatcagaagaagtgcttcaagtgtggtcagaa 23097568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 23274735 - 23274459
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || || |||||||| |||||||||||||| || || || |||||||| || |||||||| |||| ||| ||||| |||||    
T  23274735 gtaggatctatgaagaggatacgaaggctcattacaaggtgatgagtgaacgtaggggcaagggacaacagagtcgtccgaagcagtatagtgctcctgc 23274636  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||  | ||||||||||||||||| || | ||||||||||||| |||| || |||||    |||||||| |||||||||||||||    
T  23274635 tgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctactgaaattgtttgcaacaagtgtggtgagaaaggccacaag 23274536  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcg 277  Q
    ||||| |||||||| || |||||||||||||||||||||||||| |||||||| |||   ||||||||||| |||||    
T  23274535 agtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggacagaagggacacacattagctgattgtaagcg 23274459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 20848711 - 20848452
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  20848711 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 20848612  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| ||||  |  || | |||||||||||||| |||||| ||| | |  |||||||| |||||||||||||||||||| ||||||   |     
T  20848611 agatgggtgatgataggatcc--aagaggagagatgctcctgttgagattgtt-gctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 20848515  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  20848514 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 20848452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 284
Target Start/End: Complemental strand, 28350958 - 28350734
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| |||||| ||||||| ||||| || ||||| |||| |||||| ||   ||| ||| | |||||||||||||| || || | |||||||| |||||    
T  28350958 aagggtcagcaaggtcgtccgaagccctatagtgctcctgttgacaaaggggagcaaagattgaatgatgagaggagacctaagaggagagatgttcctg 28350859  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcactt 259  Q
    ||||||| ||||| |  |||||||| |||||||||||||||||||| ||||| |     |||||||| ||||||||| | |||||  |||| || ||       
T  28350858 ctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatac 28350759  T
Q  260 gttagctgattgcaagcgtggtgat 284  Q
    | ||||||| |||||||||||||||    
T  28350758 gatagctgaatgcaagcgtggtgat 28350734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 284
Target Start/End: Complemental strand, 21901668 - 21901396
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggta--agggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaaggg 109  Q
    |||||||| || ||| ||||||||||||| |||||||||  |||||| |  | || || ||| ||| ||| ||||| |||||||| ||||||||||| ||    
T  21901668 gaggaggatacgaaatctcattataaggttatgagtgag--aagaggaacaaaggccatcaaggtcatccgaagccctacagtgctcctgctgacaaagg 21901571  T
Q  110 taggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtt 209  Q
     |  |||||| | |||||||||||||| || || |  ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||||||| |||    
T  21901570 gaaacagagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtt 21901471  T
Q  210 tgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    || |     |||||||| ||||||||| | |||||  |||| || ||   | ||||||| |||||||||||||||    
T  21901470 tgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgtggtgat 21901396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 44382876 - 44382982
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  44382876 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 44382975  T
Q  103 acaaggg 109  Q
    |||||||    
T  44382976 acaaggg 44382982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 10871987 - 10871887
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| ||||| ||||| || |||||  ||| |||| | |  ||||||||||| || |||||||||||||||||||||||||||||||    
T  10871987 aggatctacgaagaggataccaaggctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctg 10871888  T
Q  103 a 103  Q
    |    
T  10871887 a 10871887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 23116360 - 23116571
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||||||||| ||||| |||| ||||||||| |||||  | | |||| | ||||  ||||||  |||| ||||| |||||||| || ||||||||||    
T  23116360 gtaggatctacgaagaggataccagagctcattacaaggttgttaatgagaggaagac-taagggcaagcagagtcgccctaagccttatagtgcccctg 23116458  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| | ||||||| |    ||||| ||| |||| || | ||  ||||||||| | ||||| |||||||| || ||||||| ||||||||||||    
T  23116459 ctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcagagattgtttgtttcaactgtggcgggaaaggccacaa 23116558  T
Q  200 gagtaacgtttgt 212  Q
    |||||| ||||||    
T  23116559 gagtaatgtttgt 23116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 24265507 - 24265407
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| || |||||  ||| |||| |||  || ||||||||||| |||||||||||||||||||||||||||||||    
T  24265507 aggatctacgaagaggatacgaaggctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 24265408  T
Q  103 a 103  Q
    |    
T  24265407 a 24265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 9338719 - 9338616
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  9338719 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 9338620  T
Q  103 acaa 106  Q
    ||||    
T  9338619 acaa 9338616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 9487353 - 9487250
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  9487353 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 9487254  T
Q  103 acaa 106  Q
    ||||    
T  9487253 acaa 9487250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 284
Target Start/End: Original strand, 24657108 - 24657242
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    |||| ||||||||||||   |||||| || ||||| |||||||||||||||||||  |||||| |  |||| | ||||||||| ||| |||||||  |||    
T  24657108 gatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaaga 24657207  T
Q  250 agggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||||||   |||||||||||||| | |||||||    
T  24657208 agggtcacacattagctgattgcaaacatggtgat 24657242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 17002137 - 17002037
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||||||||    
T  17002137 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctg 17002038  T
Q  103 a 103  Q
    |    
T  17002037 a 17002037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 16984377 - 16984274
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  16984377 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 16984278  T
Q  103 acaa 106  Q
    ||||    
T  16984277 acaa 16984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 22322705 - 22322756
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  22322705 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 22322756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 24713114 - 24713063
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  24713114 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 24713063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 22462931 - 22462993
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||| ||||||    
T  22462931 gatgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgt 22462993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 23205306 - 23205245
Alignment:
Q  151 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    |||||||| | ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  23205306 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 23676910 - 23676849
Alignment:
Q  151 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    |||||||| | ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  23676910 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23676849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 27374406 - 27374303
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| ||||||||  ||| |||  | |  || ||||||| ||| |||||||||||||||||||||||||| ||||    
T  27374406 aggatctacgaagaggatacgaaggctcactataaggtagtgaatgaaaggaagggcaagggactgcagagtcgtcctaagccgtacagtgcccccgctg 27374307  T
Q  103 acaa 106  Q
    ||||    
T  27374306 acaa 27374303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 11351161 - 11351287
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| || |||||| | ||||| |   |||| || ||| |||||||  |||    
T  11351161 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccaaaggaggtagagaaatgtttctggtgtggcaaga 11351260  T
Q  250 agggtcacttgttagctgattgcaagc 276  Q
    |||||||    ||||||||||||||||    
T  11351261 agggtcatacattagctgattgcaagc 11351287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 16931692 - 16931598
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccc 97  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| ||||||||||||||||||||||||||    
T  16931692 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccc 16931598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 21320459 - 21320505
Alignment:
Q  156 cctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||    
T  21320459 cctgctgagattgtctgttttaattgtggcgagaaaggccacaagag 21320505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 24704932 - 24705060
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    |||| ||||||||||||  | ||||| || ||||| ||||||||||||||||| || |||||| |  |||| |  ||||| || |||  ||||||  |||    
T  24704932 gatgttcctgctgagattatctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttccagtgtggcaaga 24705031  T
Q  250 agggtcacttgttagctgattgcaagcgt 278  Q
    ||||||||   ||||||||||||||||||    
T  24705032 agggtcacactttagctgattgcaagcgt 24705060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 24817218 - 24817354
Alignment:
Q  78 cctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgtttta 177  Q
    |||||||| || ||||| |||||||| |||||||  || ||| | ||||||||||||||||| |  | || |||| || || ||||||| ||||| | ||    
T  24817218 cctaagccttatagtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcctagaaagaaagatactactactgagattgtttgctata 24817317  T
Q  178 agtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
      ||||| ||||| |||||||||||||| | ||||||    
T  24817318 cttgtggtgagaagggccacaagagtaatgcttgtac 24817354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 22733077 - 22733183
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    ||||| ||||||||||| ||||| |||||||| ||| |  ||| |||||| ||||  |||||| ||||| ||||| |||||||  |||||||||||||||    
T  22733077 aggatttacgaggaggataccaaggctcattacaagattgtgaatgagcggaagac-taagggtcagcagagtcgccctaagctttacagtgcccctgct 22733175  T
Q  102 gacaaggg 109  Q
    || |||||    
T  22733176 gataaggg 22733183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 22742269 - 22742375
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    ||||| ||||| ||||| ||||| |||||||| |||||  ||| |||||| ||||  |||||| ||||| ||||| |||||||| || ||||||||||||    
T  22742269 aggatttacgaagaggataccaaggctcattacaaggtcgtgaatgagcggaagac-taagggtcagcagagtcgccctaagccttatagtgcccctgct 22742367  T
Q  102 gacaaggg 109  Q
    || |||||    
T  22742368 gataaggg 22742375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 24874113 - 24874156
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||    
T  24874113 aagggacggcagagtcgttctaagccgtacagtgcccctgctga 24874156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24704783 - 24704891
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagc-gaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    |||| ||||| |||||||| ||||  |||||||| |||||  ||| ||||| |||||  |||||| ||||| ||||| |||||||| || ||||||||||    
T  24704783 gtagaatctatgaggaggataccagggctcattacaaggttgtgaatgagcagaagac-taagggccagcagagtcgccctaagccctatagtgcccctg 24704881  T
Q  100 ctgacaaggg 109  Q
    |||| |||||    
T  24704882 ctgataaggg 24704891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 23028912 - 23028963
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||||||||| || |||||| | ||||| |||||||||||||||||    
T  23028912 gatgctcctgctgagattgtctgtttt-attgtggtgagaaaggccacaagag 23028963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 24678480 - 24678428
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| |||||||||||| || || ||||| ||||| |||||||||||||||||    
T  24678480 gatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagag 24678428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 6 - 286
Target Start/End: Original strand, 4618 - 4898
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||    
T  4618 atctatgaggaggacacaaaacctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgccccttttgaca 4717  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | ||| ||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  4718 agggaaagcaaagactgaatgatgagaggaggccaaataggagagatgctcctgctgagatagtctgttataagtgtggccagaaaggccacaagagtaa 4817  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     ||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4818 tgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacatgttagctgattgcaagcgtggtgatgt 4898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 17250 - 17533
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  17250 aggatctatgaggaggacacaaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctg 17349  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| |  || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17350 acaagggaaaacaaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttataagtgtggcgagaaaggccacaagag 17449  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||   ||||| |||| || ||||||||||||    
T  17450 taatgtttgtaccaaggatgagaagaagtgctttaggtgtgatcaaaagggtcacacattagcggattacatgcgtggtgatgt 17533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 40584 - 40313
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||||| | ||    
T  40584 gaggacacaaaagctcattataaggtgatgagtgagcgaagaggtatgggacaacagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagc 40485  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
    | ||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||    
T  40484 aaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtac 40385  T
Q  215 caaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||    
T  40384 caaagatgataagaagtgcttcaggtgtggttagaagggtcacatgttagcggattgcaagcgttgtgatgt 40313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 51603553 - 51603838
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| ||||| ||||||||  |    
T  51603553 gtaggatctacgaggaggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgac 51603652  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  51603653 tgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaag 51603752  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  51603753 agtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 51603838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 53750231 - 53750516
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| ||||| ||||||||  |    
T  53750231 gtaggatctacgaggaggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgac 53750330  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  53750331 tgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaag 53750430  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||| ||||||||||| ||||||||    
T  53750431 agtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 53750516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 16151142 - 16150862
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| ||||| || || |||||||| |||||||| |||||||| ||||| ||| ||||||    
T  16151142 atctatgaggaggacacaaaagctcattacaaggtgatgagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgaca 16151043  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || | |||||   | ||||||||||||||||| || | |||||||||||||| ||| || ||||| | ||||||||||||||||||||||||||||||    
T  16151042 aaggaaagcagaagttgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaa 16150943  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     |||||||| || |||||||||||||||||||||||||||||||| || |||    |||||||||||||||||||||||||    
T  16150942 tgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtggtgatgt 16150862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 16155288 - 16155008
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| ||||| || || |||||||| |||||||| |||||||| ||||| ||| ||||||    
T  16155288 atctatgaggaggacacaaaagctcattacaaggtgatgagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgaca 16155189  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || | |||||   | ||||||||||||||||| || | |||||||||||||| ||| || ||||| | ||||||||||||||||||||||||||||||    
T  16155188 aaggaaagcagaagttgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaa 16155089  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     |||||||| || |||||||||||||||||||||||||||||||| || |||    |||||||||||||||||||||||||    
T  16155088 tgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtggtgatgt 16155008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 24 - 286
Target Start/End: Original strand, 14993151 - 14993413
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||| || |||||||  |||||||| |||||||||||||||||||||| ||||||| | |    
T  14993151 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtctgaagccgtatagtgcccctgctgacaagggtaagcagagattga 14993250  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| || | ||||||||||||| |||| || |||||||| |||||||| || ||||||||||||||||| ||||||  |   ||  |    
T  14993251 atgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgtgagaa 14993350  T
Q  224 gaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||||||||||||||||||||||||| || |||   |||||||||||||||| ||| |||||    
T  14993351 gaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcatggggatgt 14993413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 15073870 - 15073585
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| || ||||| ||||| |||||    
T  15073870 gtaggatctatgaagaggatacaaaagctcattataaggtgatgagtgagcgtagaggtaagggacagctgagtcgtccgaaaccgtatagtgctcctgc 15073771  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| | ||  |||||||| ||||||||||||||||| |  | ||||||||||||| ||||||| || ||||| |||||||| || ||||||||||||    
T  15073770 tgacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaag 15073671  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| || |||  |   |||||||||||||| || ||||||||  |||| || |||   |||||||||||||||| | |||||||    
T  15073670 agtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagctttgtgatgt 15073585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 15267285 - 15267038
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||||| ||||||||||| |||||||||||||| || ||||| |||||||| || |||||||| |||||||| ||||| |||||||    
T  15267285 aggatttatgaggaggacacgaaagctcattacaaggtgatgagtgaacgcagaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctg 15267186  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||||||  | ||||||||||||||||| || | ||||||||||||| |  | || ||||| || |||||||  ||||| ||||| |||||    
T  15267185 acaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctacgaatattgtttgcttcaagtgtgatgagaagggccataagag 15267086  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||| ||||||  ||  ||||||||||||||||||||||||||||||||    
T  15267085 taatgtttgtgacagagatgagaagaagtgcttcaggtgtggtcagaa 15267038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 3 - 280
Target Start/End: Complemental strand, 18259950 - 18259673
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| || || || || ||| ||||||| ||||||||||||||||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||    
T  18259950 aggatctatgaagaagatacaaaatctcattacaaggtgatgagtgagcgtaggggcaagggacagcagagtcatccgaagccgtatagtgctcctgctg 18259851  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||||||  | ||||||||||||||||| || | || |||||||||| || | || ||||| ||||||||||| || ||||||||||||||    
T  18259850 acaagggtaagcagaggttaaatgatgagaggaggcccaagaggacagatgctcctactaatattgtttgctttaagtgtggtgaaaaaggccacaagag 18259751  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||| ||||||   |  |||||||||||||||||||||||||||||||| || |||    |||||||||| ||||||||    
T  18259750 taatgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgtaagcgtgg 18259673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 3261572 - 3261834
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| ||||||||||| || | |||||    
T  3261572 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 3261671  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  3261672 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 3261771  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  3261772 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 3261834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 20893525 - 20893263
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || || ||||||||||| |||||||||||||| || ||||| ||||||||||| || | |||||    
T  20893525 gacaccaaagctcattacaagataatgagtgagaggaggggcaagggacagcagagtcgtcctaagccttaaagtgctcctgctgacaaaggaaagcaga 20893426  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| || |||||| ||||||| || ||||||   |     
T  20893425 agatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggcaacaagagcaatgtttgtggtag 20893326  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| ||||||||||||||||||||||||||| |||   |||||||| |||||||||||    
T  20893325 agatgagaggaagtgcttcaggtgtggtcagaagggacacaatttagctgaatgcaagcgtgg 20893263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 7357778 - 7357499
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || || |||||||| |||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||| ||| |||||    
T  7357778 gtaggatttatgaagaagacaccaaggctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcctgc 7357679  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || | |||||   |   |||||| |||||||| || | ||||||||||||||||||||| |||||||  ||| |||| |||||||||||||||    
T  7357678 tgacaaaggaaagcagaagatgggtgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaag 7357579  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    || || |||| |   || ||||||| |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  7357578 agcaatgtttatggtaaagatgagaggaagtgcttcaggtgtggtcagaagggtcacaatttagctgaatgcaagcgtgg 7357499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 44658627 - 44658906
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || || ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| |||||    
T  44658627 gtagaatctatgaagaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgc 44658726  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
     ||||| || | |||||   |   | |||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||    
T  44658727 ggacaaaggaaagcagaagatgggtcatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaag 44658826  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| ||||||   |  ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  44658827 agtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 44658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 29450315 - 29450577
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | ||||||||| || |||||||| ||||||||||| || | |||||    
T  29450315 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcaga 29450414  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||         
T  29450415 agatgggtgatgataggaggcctaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggagg 29450514  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||| ||||||||||||||||||||||||   |||||||| |||||||||||    
T  29450515 agatgataggaagtgtttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 29450577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 11204010 - 11204249
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| || ||||| ||||||||||| || | | |||    
T  11204010 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagtaga 11204109  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| ||||| || || | ||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| || ||||||   |     
T  11204110 agatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtag 11204209  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcac 257  Q
     ||||| |  || |||||||||||||||||||||||||||    
T  11204210 agatgatagaaaatgcttcaggtgtggtcagaagggtcac 11204249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 14697598 - 14697408
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| || ||  ||| |||| | | ||| ||||| |||||||||||||| ||||| |||||||| |||||||| ||||||| ||    
T  14697598 gaggataccaaagctcattacaaagttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagc 14697499  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | ||| | ||||||||||||||||| |  | || ||||||| |||||||||| ||||| | ||  ||||| ||||||||||| ||||||||    
T  14697498 aaagattgaatgatgagaggaggcctagaaagaaagatgctactgctgagattgtttgctatacttgtggtgagaaaggccataagagtaa 14697408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 280
Target Start/End: Complemental strand, 27903885 - 27903617
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagagg--taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaaggg 109  Q
    |||||||| || || ||||| |||||||||||||| |||  ||||||  |||||| |||   ||||| || ||||| |||| ||  ||||||||||| ||    
T  27903885 gaggaggatacaaaggctcactataaggtgatgagcgag--aagaggaataagggccagagtagtcgcccgaagccctacaatgttcctgctgacaaagg 27903788  T
Q  110 taggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtt 209  Q
     |  || ||| | |||||||||||| |||| |    |||||||||||||| |||  | |||||||  |||||||| | |||||||||||||||||| ||     
T  27903787 aaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagagtaatgtc 27903688  T
Q  210 tgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    || ||||| |||||||||||||| ||||| ||||||||||| |||||  |||| ||||| |||||||||||    
T  27903687 tgcaccaaagatgagaagaagtgtttcagatgtggtcagaaaggtcatgtgttggctgaatgcaagcgtgg 27903617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 8709188 - 8708978
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| |||||||| ||||| | |||||||||||| ||||| ||||||||||| ||    || || |||||| ||||||| ||||  || ||||| |||||    
T  8709188 gtagaatctacgaagaggatatcaaagctcattacaaggttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagctctatagtgctcctgc 8709089  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || | ||| ||| | |||||||||||||| || || |  | ||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||    
T  8709088 tgacaaagggaagcaaagattgaatgatgagaggagacctaagagaatagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaag 8708989  T
Q  201 agtaacgtttg 211  Q
    ||||| |||||    
T  8708988 agtaatgtttg 8708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 281
Target Start/End: Complemental strand, 13879609 - 13879340
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa-gggt 110  Q
    |||||||| || || |||||||||||||| | ||||||||| ||    ||||| |||||| ||||||| ||||| |||||||| |||| |||||| ||||    
T  13879609 gaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgatgacaaagggt 13879510  T
Q  111 aggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgttt 210  Q
    || || ||| | |||||||||||||| || || |  ||||||| | || ||||||| |||||||  |||||||| ||||| |||||||||||||| || |    
T  13879509 ag-caaagattgaatgatgagaggagacctaagagaagagatgtttctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtat 13879411  T
Q  211 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggt 281  Q
    | |   | || ||||||||||||||| | |||||  ||||||| ||   | ||||||| ||||||||||||    
T  13879410 gcaatgatgaggagaagaagtgcttccgatgtggaaagaagggccatacgatagctgaatgcaagcgtggt 13879340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 18604378 - 18604531
Alignment:
Q  59 taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcct 158  Q
    |||||| ||||| ||||| |||||||| || | |||||||||||| ||||| | ||||||| |    ||||| ||| |||| || | ||  |||||||||    
T  18604378 taagggccagcagagtcgccctaagccttataatgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcct 18604477  T
Q  159 gctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
     | |||||  |||||||||| |||||||||||||||||||||||||| ||||||    
T  18604478 tcggagattatttgttttaactgtggcgagaaaggccacaagagtaatgtttgt 18604531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 8389918 - 8389810
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  8389918 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 8389819  T
Q  103 acaagggta 111  Q
    |||||||||    
T  8389818 acaagggta 8389810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 13513802 - 13513650
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| |||||||| || |||||||||| ||| ||||| | ||||||| |   |||||| ||| |||| || | ||  ||||||||||    
T  13513802 aagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctg 13513703  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | ||||| || ||||| || ||||||||||||||||||||||| || ||||||    
T  13513702 cagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgt 13513650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 8536 - 8343
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| |||||  ||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||||||||| |||||||| |||||||| |||||||    
T  8536 gaggaggataccaagactcattacaagattgtgaatgagcgaaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggta 8437  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
      |||||| |   |||||||||| | || |  | || ||||||||||| |||||| || || | ||  ||||| ||||||||||||||||||||    
T  8436 aacagagaatggttgatgagaggcgccctataaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaa 8343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 8050186 - 8050229
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  8050186 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 8050229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 14300542 - 14300585
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  14300542 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 14300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 17091655 - 17091758
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||  | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  17091655 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 17091754  T
Q  103 acaa 106  Q
    ||||    
T  17091755 acaa 17091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 18223979 - 18224185
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgac 104  Q
    ||||||||||| || ||||| |||||||| |||||  ||| |||||| ||||   ||||| ||||| ||||| |||||||| || |||||||||| |||     
T  18223979 atctacgaggaagataccaaggctcattacaaggttgtgaatgagcggaagacc-aagggccagcagagtcgccctaagccttatagtgcccctgttgat 18224077  T
Q  105 aagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagta 204  Q
    ||||| |  |||||| |    ||||| ||  |||| || | ||  ||||||||||| ||||| |||||||| || ||||||||||||||||||||| |||    
T  18224078 aagggcaaacagagaatggtcgatgatagacggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagtgta 18224177  T
Q  205 acgtttgt 212  Q
    | ||||||    
T  18224178 atgtttgt 18224185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 19775356 - 19775407
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  19775356 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 19775407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 23959196 - 23959145
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  23959196 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 23959145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 27714785 - 27714734
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  27714785 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 27714734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 12480049 - 12480003
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  12480049 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 12480003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 16233555 - 16233601
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  16233555 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16233601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 15548 - 15741
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| |||||  ||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||||||| | |||||||| |||||||| |||||||    
T  15548 gaggaggataccaagactcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtcctaagacttacagtgctcctgctgataagggta 15647  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
      |||||| |   |||||||||| | || |  | || ||||||||||| |||||| || || | ||  ||||| ||||||||||||||||||||    
T  15648 aacagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaa 15741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 16219628 - 16219495
Alignment:
Q  72 agtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagttt 171  Q
    |||||||| ||||| |||||||| |||||||| ||||| |  || ||| ||||||| ||||||||||| |  | || ||||||||||| ||||||  | |    
T  16219628 agtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgacgagaggaggcctagaaagaaagatgctcctgttgagattatgt 16219529  T
Q  172 gttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | | ||  ||||||||||||||||| ||||||||    
T  16219528 gctatacttgtggcgagaaaggccataagagtaa 16219495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 16222948 - 16222815
Alignment:
Q  72 agtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagttt 171  Q
    |||||||| ||||| |||||||| |||||||| ||||| |  || ||| ||||||| ||||||||||| |  | || ||||||||||| ||||||  | |    
T  16222948 agtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgacgagaggaggcctagaaagaaagatgctcctgttgagattatgt 16222849  T
Q  172 gttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | | ||  ||||||||||||||||| ||||||||    
T  16222848 gctatacttgtggcgagaaaggccataagagtaa 16222815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 14684016 - 14683973
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  14684016 aagggacagcagagtcgtcctaagccatacagtgcccctgctga 14683973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 40476489 - 40476446
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  40476489 aagggacagcggagtcgtcctaagccgtacagtgcccctgctga 40476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 14162923 - 14162871
Alignment:
Q  59 taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||| || |||||||||||||| |||||||| |||||||| |||||||    
T  14162923 taagggacaacagagtcgtcctaagccttacagtgctcctgctgataagggta 14162871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 15144451 - 15144557
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    ||||| ||||||||||| ||||| |||||||| |||||  ||| |||||| ||||  |||||| ||||| ||||| |||||||| || || |||||||||    
T  15144451 aggatttacgaggaggataccaaggctcattacaaggtcgtgaatgagcggaagac-taagggccagcagagtcgccctaagccttatagcgcccctgct 15144549  T
Q  102 gacaaggg 109  Q
    || |||||    
T  15144550 gataaggg 15144557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 19635585 - 19635542
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||    
T  19635585 aagggacagcagagttgtcctaagccgtacagtgcccccgctga 19635542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 180; Significance: 3e-97; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 64368 - 64651
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||    
T  64368 aggatatatgaggaggactcaaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctg 64467  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  64468 acaagggaaagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaaaggccacaagag 64567  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||| || |||    ||||| |||||||||||||||||||    
T  64568 taatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgt 64651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 48946 - 49229
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||    
T  48946 aggatatatgaggaggactcaaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctg 49045  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  49046 acaagggaaagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagag 49145  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||| || |||    ||||| |||||||||||||||||||    
T  49146 taatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgt 49229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 57980 - 58263
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||    
T  57980 aggatatatgaggaggactcaaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctg 58079  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  58080 acaagggaaagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagag 58179  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||| || |||    ||||| |||||||||||||||||||    
T  58180 taatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgt 58263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 30164 - 29912
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||| |||||    
T  30164 gtaggatttatgaggaggacacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgc 30065  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||  | ||||||||||||||||| || | |||||||| |||| |||| |||||||| || |||||||| |||||||||||||||    
T  30064 tgacaagggtaagcagagtttaaatgatgagaggaggcccaagaggagagatgttcctactgacatagtttgcttcaagtgtggtgagaaaggccacaag 29965  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
    ||||||||||||   |  ||||||||||||||||||||||||||||| |||||    
T  29964 agtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggtcaaaaggg 29912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 178; Significance: 5e-96; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 251 - 536
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||  |||||||||||||||||||||||    
T  251 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgaacgaagaggtaagggacaacagagtcaccctaagccgtacagtgcccctgc 350  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||| | ||||| | | ||||||||||||||||| |||| ||||||||||||||||||||| |||||||  || ||||||  |||||||||||||    
T  351 tgacaagggaaagcagatattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaaatgtggcaggaaaggccacaag 450  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| | |||||||||||||||||||||||||| ||||||||||||||||| || |||    |||||||||||||||||||||||||    
T  451 agtgatgtttgtaccaaggatgagaagaagtgtttcaggtgtggtcagaaaggacacagcctagctgattgcaagcgtggtgatgt 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 21331 - 21102
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| | ||| ||||||||| | ||||||||||| ||||| ||||||||||||||||| || |  ||||| || |    
T  21331 aaagctcattacaaggtgatgagtgagcgtaaaggcaagggacagtagagtcgtcctaaaccgtatagtgcccctgctgacaaaggaaaacagaggctga 21232  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| || | |||||||||| |||||||||| ||||| |  |||||||| |||||||||||||||||||| |||||||| || | |||    
T  21231 atgatgagaggaggcccaagaggagagatgcttctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaaggtga 21132  T
Q  224 gaagaagtgcttcaggtgtggtcagaaggg 253  Q
    ||||||||||||||||||||| ||||||||    
T  21131 gaagaagtgcttcaggtgtggacagaaggg 21102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 3 - 253
Target Start/End: Original strand, 996 - 1246
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||||| ||||| |||||||| ||||    
T  996 aggatctatgaggaggacaccaaagctcattataaggtgaagagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggctg 1095  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||||| ||||||||||||||||||||||||||||| || ||  | |||| ||||||||||||| || |||||||||||||||||||| ||||||||    
T  1096 ataagggtaagcagagacttaatgatgagaggaggccgagtaagaagggtgcttctgctgagatagtatgctttaagtgtggcgagaaaggtcacaagag 1195  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
    |||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  1196 taacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaaggg 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 161; Significance: 7e-86; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 15 - 283
Target Start/End: Original strand, 11684 - 11952
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| || || ||||| ||||||||||| || | ||    
T  11684 gaggacactaaggctcattataaggtgatgagtgagagaagaggtaagggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaagc 11783  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||    
T  11784 agagacttaatgatgagaggaggcccaagaggagagatgctcctactgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtac 11883  T
Q  215 caaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
     || |||||||||||||||||||||||||||||||| || |||    ||||||||||||||||||||||    
T  11884 taaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtga 11952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 24 - 277
Target Start/End: Original strand, 1739 - 1992
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||| || || ||||| ||||||||||| || |  ||||| || |    
T  1739 aaagctcattacaaggtgatgagtgagcgcagaggtaagggacagcagagtcatcctaaaccatatagtgctcctgctgacaaaggaaaacagaggctga 1838  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| || | || ||||||||||||||| || ||||| |  |||||||| |||||||||||||||||||| ||||||   || |||||    
T  1839 atgatgagaggaggcccaagaggatagatgctcctgctgaaattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatga 1938  T
Q  224 gaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcg 277  Q
    ||||||||||||||||||||||||||| || |||   ||||||||||| |||||    
T  1939 gaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcg 1992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 280
Target Start/End: Complemental strand, 70901 - 70633
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagagg--taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaaggg 109  Q
    |||||||| || || ||||| |||||||||||||| |||  ||||||  |||||| |||   ||||| || ||||| |||| ||  ||||||||||| ||    
T  70901 gaggaggatacaaaggctcactataaggtgatgagcgag--aagaggaataagggtcagagtagtcgcccgaagccctacattgttcctgctgacaaagg 70804  T
Q  110 taggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtt 209  Q
     |  || ||| | |||||||||||| |||| |    |||||||||||||| |||  | |||||||  |||||||| | ||||||||||||| |||| ||     
T  70803 aaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagggtaatgtc 70704  T
Q  210 tgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    || ||||| |||||||||||||| ||||| || ||||| || |||||  |||| ||||| |||||||||||    
T  70703 tgcaccaaagatgagaagaagtgtttcagatgcggtcataaaggtcatgtgttggctgaatgcaagcgtgg 70633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 7573 - 7293
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| |||||  | || |||||||| |||||||| |||||||| ||||| |||| |||||    
T  7573 atctatgaggaggacacgaaagctcattacaaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgttgaca 7474  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||||| ||||||  | ||||||||||||||||| |||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  7473 agggtaagcagaggttgaatgatgagaggaggcccaataggagagatgctcctgctgagattgtttgttacaagtgtggcgagaaaggccacaagagtaa 7374  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     |||||||| || |||||||||||||||||||||||||||||||| || |||    |||||||||||||||||||||||||    
T  7373 tgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgt 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 53189 - 53469
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||  ||||||||| || ||||||||||||||||    
T  53189 aggatatatgaggaagacaccaaggctcattataaggtgatgagtgagcgaagagataagggacatcaagttcgtcctaaaccatacagtgcccctgctg 53288  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||||| | ||||||||||||||||| |||| ||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||||||    
T  53289 acaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcttgctgggatcgtttgttacaagtgtggcgagaaaggccacaagag 53388  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
    ||| |||||||| |||||||||||||| || |||||||||||||| || || ||| |  ||| ||||||||||||||||||    
T  53389 taatgtttgtactaaggatgagaagaaatgattcaggtgtggtcaaaaaggacacatcctagttgattgcaagcgtggtga 53469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 164167 - 164450
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||  | ||||||||||||||||    
T  164167 aggatatatgaggagaacacgaaagctcattacaaggtgatgagtgaacgaagaggtaaaggacagcagagtcgtcctaaatcatacagtgcccctgctg 164266  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| |  |||||  | ||||||||||||||||| |||| |||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  164267 acaagggaaaacagaggttgaatgatgagaggaggcccaataggagagacgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagag 164366  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| |||||| | ||||||||||||||||| ||||||||||||||||| || |||   |||| |||||||||||||||| ||||    
T  164367 taatgtttgttctaaggatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagttgattgcaagcgtggtaatgt 164450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 30487 - 30539
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  30487 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagag 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 21566920 - 21567146
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| ||  |||||||||| || |||||||||||||||||||||||||||||||||||||| | |||  |||| |    
T  21566920 aaagctcattacaaggtgatgagtgagcggaggagtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 21567019  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||| ||||| || | |||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| || |||||    
T  21567020 atgatgagagaaggcccaagaggagagatgctcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtactaaagatga 21567119  T
Q  224 gaagaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||||||||||||||||    
T  21567120 gaagaagtgcttcaggtgtggtcagaa 21567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 14376824 - 14377107
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||| |||||  | ||||||||||| |||||||| |||||||| ||||| |||||||    
T  14376824 aggatctatgaggaggacacgaaagctcattacaaggtgatgagtgatcgaaggagcaagggacagcagagtcgtccgaagccgtatagtgctcctgctg 14376923  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| |  |||||  | |||||||||||||| || |||| |||||||||||||| |||  | ||||| |  ||||| || |||||||||||||||||    
T  14376924 acaagggaaaacagaggttgaatgatgagaggagacccaataggagagatgctcctgttgatgttgtttgctacaagtgcggtgagaaaggccacaagag 14377023  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||| |||||||| || |||||||||||||||||||||||||||||||| || |||   |||||| |||| ||||||||||||||    
T  14377024 taatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctaattgtaagcgtggtgatgt 14377107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 6 - 283
Target Start/End: Complemental strand, 18798060 - 18797783
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| || ||||||||  |||||||||| |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| ||||| ||||||||||    
T  18798060 atctatgaagaggacacagaagctcattacaaggtgatgagtgaccgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgaca 18797961  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | ||| ||| | ||||||||||||||||| || | ||| ||||||||||  || || ||||||| ||||||||||||||||||||||||||||||    
T  18797960 agggaaagcaaagattgaatgatgagaggaggcccaagaggagggatgctcctgtggatattgtttgttataagtgtggcgagaaaggccacaagagtaa 18797861  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
     ||||| || || |||||| |||| || |||||||||||||||||||| |||    ||||||||||||||||||||||    
T  18797860 tgtttgcactaaagatgagcagaaatgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtga 18797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 24515343 - 24515569
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| || ||||||||||| || || ||||| |||||||||||||| |  ||||| || |    
T  24515343 aaagctcattacaaggtgatgagtgaccgcagaggcaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggaaaacagaggctga 24515442  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| || | |||||||||||||| ||| || ||||||| ||||||||| |||||||||||||||||||| |||||||| || |||||    
T  24515443 atgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgttataagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatga 24515542  T
Q  224 gaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||| |||||||||||||||||    
T  24515543 gaagaagtgtttcaggtgtggtcagaa 24515569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 19438377 - 19438092
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || || ||| |||| |||||  |||||||  | ||||||||||||||||| |||||||| ||||| || ||||| |||||    
T  19438377 gtaggatctatgaagaggatacgaaggcttattacaaggtagtgagtgaaaggagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgc 19438278  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||  | ||||||||||||||||| || | ||||||||||||||||||||| ||| |||  |||||||| ||||||||||||  |    
T  19438277 tgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctgctgagatcgttcgttacaagtgtggtgagaaaggccacttg 19438178  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| |||||||| || |||||||| ||||| ||||||||||||||||| || |||    |||||||||||||||||||||||||    
T  19438177 agtaatgtttgtactaaagatgagaataagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgt 19438092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 27 - 284
Target Start/End: Original strand, 34642517 - 34642775
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||||||||||| || || || |||||||| || ||||||||||||||||| ||||| |||||||  ||||| | |||  |||| ||||    
T  34642517 gctcattacaaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtatagtgctcctgctggtaagggaaagcaacgactgaatg 34642616  T
Q  127 atgagaggaggccgaatatga-gagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgaga 225  Q
    |||| ||||| ||  |   || ||||  ||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| |||||||    
T  34642617 atgaaaggagaccccaagggaagagacactcctgcggagatagtttgctttaagtgtggcgagaagggccacaaaagtaatgtttgtaccaaagatgaga 34642716  T
Q  226 agaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||    
T  34642717 agaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgtaaacgtggtgat 34642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 24367758 - 24367499
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| ||||||||||| || | |||||    
T  24367758 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 24367659  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | ||||||||||| || |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  24367658 agatgggtgatgataggaggcccaagaggagagatgctcatgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 24367559  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcg 277  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| ||||||||    
T  24367558 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcg 24367499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 253
Target Start/End: Original strand, 10465756 - 10466006
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||| ||||||||||| ||||||||||||||| | || |||||||||||||| |||||||||||||| |||| ||| | |||||    
T  10465756 aggatatatgaggaagacacaaaagctcattacaaggtgatgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctg 10465855  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | ||||| | | |||||||| |||||||| || | |||||||| |||||||||||| || ||||  |||||||| || ||||||||||||||    
T  10465856 acaagggaaagcagaaaatgaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagag 10465955  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
     || | ||||   |  ||||||| ||| || || |||||||||||||||||    
T  10465956 caatgcttgtggtagagatgagaggaaatgttttaggtgtggtcagaaggg 10466006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 25771219 - 25771019
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || ||||| || |||||||||||||  |||||||||||||| |||||||||||||| || ||||||||  | ||||| ||||| |||||    
T  25771219 gtaggatttatgaagaggatacaaaagctcattatagagtgatgagtgagcgcagaggtaagggacaacagagtcgtccgtaaccgtatagtgctcctgc 25771120  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||||| || ||||||||||||||||| || | ||||||||||||| ||||||| || ||||| |||||||| || ||||||||||||    
T  25771119 tgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaag 25771020  T
Q  201 a 201  Q
    |    
T  25771019 a 25771019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 19456372 - 19456149
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| ||| || ||||||| || |||||||||||||| || ||||||||||| || || ||||| ||||||||||| || |  || || || ||||    
T  19456372 gctcattacaagctggtgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatg 19456273  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaa 226  Q
    ||||||||||||| || | ||||||| ||||| ||||||| ||||| || |||||||| || ||||||||||||||||| || |||   |  ||||||||    
T  19456272 atgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaa 19456173  T
Q  227 gaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||||  |||||||    
T  19456172 gaagtgcttcaggtggtgtcagaa 19456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 19466517 - 19466294
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| ||| || ||||||| || |||||||||||||| || ||||||||||| || || ||||| ||||||||||| || |  || || || ||||    
T  19466517 gctcattacaagctggtgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatg 19466418  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaa 226  Q
    ||||||||||||| || | ||||||| ||||| ||||||| ||||| || |||||||| || ||||||||||||||||| || |||   |  ||||||||    
T  19466417 atgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaa 19466318  T
Q  227 gaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||||  |||||||    
T  19466317 gaagtgcttcaggtggtgtcagaa 19466294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 284
Target Start/End: Complemental strand, 21474904 - 21474692
Alignment:
Q  72 agtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagttt 171  Q
    |||||||| |||||||| ||||| |||||||||||||||| |||||  || ||||||||||||||||| |  | ||||||||||||| ||||||| ||||    
T  21474904 agtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagatgctgaatgatgagaggaggcctaggaggagagatgctcctactgagattgttt 21474805  T
Q  172 gttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattg 271  Q
    |||| |||||||| || ||||||||||||||||| || |||  |   |||||||||||||| ||| | |||||  |||| || |||   || ||||| ||    
T  21474804 gtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtg 21474705  T
Q  272 caagcgtggtgat 284  Q
    |||||||||||||    
T  21474704 caagcgtggtgat 21474692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19486200 - 19486435
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| |||||||| ||||| |||||||||||||| ||||| ||||||||||| ||    || || |||||| ||||| | ||||| |||||||| |||||    
T  19486200 gtagaatctacgaagaggataccaaagctcattacaaggttatgagtgagcggaggaacaaaggccagcaaggtcgttcgaagccctacagtgctcctgc 19486299  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || | ||| ||| | |||||||||||||| || || |  ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||    
T  19486300 tgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaag 19486399  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttc 236  Q
    ||||| ||||| |     ||||||||||||||||||    
T  19486400 agtaatgtttgcaatggtgatgagaagaagtgcttc 19486435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 19881745 - 19881588
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||||||||||| || || || |||| ||| ||||||||||||||||||||||| ||||||||||  ||||| | |||  |||| ||||    
T  19881745 gctcattacaaggtgatgagtgaacggaggggcaaggaacaacaaagtcgtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatg 19881646  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtgg 184  Q
    ||||||| || || ||    |||||  ||||||||||||||||||| |||||||||||    
T  19881645 atgagagaagacccaagggaagagacactcctgctgagatagtttgctttaagtgtgg 19881588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 30677932 - 30678141
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||| || ||||||||| |||| ||||| ||||||||||| || |||||| | ||||| | |||||| ||||| ||||  || |||||||    
T  30677932 aggatctatgaggaagataccaaagctaattacaaggttatgagtgagcggaggggtaagagtcagcagaatcgtccaaagccttacaacgctcctgctg 30678031  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||  ||| ||| ||  | ||||||||||||||||| |  | || |||| ||||||||||| | ||||| |  |||||||| |||||  ||||||||||    
T  30678032 ataaatgtaagcaaagggtgaatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagagccacaagag 30678131  T
Q  203 taacgtttgt 212  Q
    ||| ||||||    
T  30678132 taatgtttgt 30678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 15462711 - 15462435
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagagg--taagggacagcaaagtcgtcctaagccgtacagtgcccct 98  Q
    ||||||| || |||||||| || ||||||||||| |||||||||||||||  ||||||  |||||| |||   ||||| || ||||| |||||||| |||    
T  15462711 gtaggatttatgaggaggatacgaaagctcattacaaggtgatgagtgag--aagaggaataagggtcagagtagtcgcccgaagccctacagtgctcct 15462614  T
Q  99 gctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccaca 198  Q
    ||| |||| || |  |||||| | ||||||||||||  ||| |    ||||||  |||||| |||  | || ||||  |||||||| | |||||||||||    
T  15462613 gctaacaaaggcaaacagagattgaatgatgagaggcagcctagagggagagagactcctgttgatgttgtgtgttacaagtgtggtgcgaaaggccaca 15462514  T
Q  199 agagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcg 277  Q
    ||||||| || || ||||  ||||||||||| || ||||| || |||||||| |||||  |||| ||||| ||||||||    
T  15462513 agagtaatgtctgcaccagagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggctgagtgcaagcg 15462435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 18660289 - 18660161
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| |||||||| || ||||||||||| ||||   |||||||| | | ||||||| | |||||||||||||| ||||| |||||||| |||||||| |    
T  18660289 atctatgaggaggatacgaaagctcattacaaggctgtgagtgagaggaaaggtaagagtcagcaaagtcgtccaaagccttacagtgctcctgctgata 18660190  T
Q  106 agggtaggcagagacttaatgatgagagg 134  Q
    |||||  ||||||  ||||||||||||||    
T  18660189 agggtgagcagagggttaatgatgagagg 18660161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 23081733 - 23081594
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||| ||||| ||||||||  ||||||| || || | ||| ||| |||||||||||||| |||| |  | || ||||||||||| |||||    
T  23081733 cagcagagtcgtccaaagccttacagtgctgctgctgataaaggaaagcaaagagttaatgatgagaggcggcctaggaagaaagatgctcctgttgaga 23081634  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | ||||||| ||  ||||| ||||||||||||||||||||    
T  23081633 ttgtttgttatacttgtggtgagaaaggccacaagagtaa 23081594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 16813902 - 16813805
Alignment:
Q  114 cagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    |||||| | |||||||||||||| || || | |||||||| |||||||||||| ||||| |  |||||||| |||||||||||||||||||| |||||    
T  16813902 cagagattgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 16813805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 8720733 - 8720821
Alignment:
Q  123 aatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
    ||||||||||||||||| || | |||||||| ||||| |||||| ||||| |  |||||||| |||||||||||||||||||| |||||    
T  8720733 aatgatgagaggaggcctaagaggagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 8720821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 28312946 - 28312892
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  28312946 ggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 28312892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 25115865 - 25115822
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  25115865 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 25115822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 29589350 - 29589453
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| ||||| ||||| || |||||  ||| |||| | |  || ||||||||||| ||||||||||||||||||||||||||  |||    
T  29589350 aggatctatgaggaggataccaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccactg 29589449  T
Q  103 acaa 106  Q
    ||||    
T  29589450 acaa 29589453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 16575203 - 16575157
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  16575203 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16575157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 16620177 - 16620223
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  16620177 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16620223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 21765182 - 21764976
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||||||||||||||| |||||  ||| |||| | |    | |||| ||||| ||||| |||||||| || |||||||||||||| |    
T  21765182 atctatgaggaggacaccaaagctcattacaaggttgtgaatgagtggaacactgagggccagcagagtcgccctaagccctatagtgcccctgctgata 21765083  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| |   ||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| ||    
T  21765082 agggcaattagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaa 21764983  T
Q  206 cgtttgt 212  Q
     ||||||    
T  21764982 tgtttgt 21764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 20010418 - 20010687
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || || |||||||||||||||||||| |||  |||   |||||| |||   ||||| || ||||| |||||||| ||| || |||| || |    
T  20010418 gaggaggatacaaaggctcattataaggtgatgagcgagaaaaggaataagggtcagagtagtcgcccgaagccctacagtgctcctactaacaaaggca 20010517  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagt-ttgttttaagtgtggcgagaaaggccacaagagtaacgttt 210  Q
      || ||| | ||||||||||||  ||| ||   |||| ||||||||| |||  | || |||||  || ||||| | ||| |||||||||||||| | ||    
T  20010518 aacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtattgttacaaatgtggtgtgaagggccacaagagtaatgctt 20010617  T
Q  211 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    | ||| | ||||||||||| || ||||| || ||||||||||||||  |||| ||||| |||||||||||    
T  20010618 gcacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtgg 20010687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 27559029 - 27559150
Alignment:
Q  155 tcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggt 254  Q
    ||||||||||||   |||||| || ||||| |||||||||||||||||||  |||||| |  |||| | ||||||||| ||| |||||||  ||||||||    
T  27559029 tcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaagaagggt 27559128  T
Q  255 cacttgttagctgattgcaagc 276  Q
    |||   |||||||| |||||||    
T  27559129 cacacattagctgactgcaagc 27559150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 28260162 - 28260211
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  28260162 ggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28260211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 28285754 - 28285705
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  28285754 ggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 28338911 - 28338960
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  28338911 ggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28338960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 22829354 - 22829397
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  22829354 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 22829397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 24292750 - 24292793
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  24292750 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 24292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 27205938 - 27205901
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgc 94  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27205938 ggtaagggacagcagagtcgtcctaagccgtacagtgc 27205901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 27243290 - 27243327
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgc 94  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27243290 ggtaagggacagcagagtcgtcctaagccgtacagtgc 27243327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 5836139 - 5836239
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| ||||| ||||| ||||||||||| || |||    ||| |||||| |  || |||||||| || ||||||||||||||||| |||||||||||||    
T  5836139 aggatttacgaagaggataccaaagctcactacaagactgtgaatgagcggaagggcaagggacaacagagtcgtcctaagccgtatagtgcccctgctg 5836238  T
Q  103 a 103  Q
    |    
T  5836239 a 5836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 2871770 - 2871813
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || ||||||||||||| ||||||||||||||||||    
T  2871770 aagggacaacagagtcgtcctaagctgtacagtgcccctgctga 2871813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21474959 - 21474908
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg 52  Q
    ||||||| || || ||||| || |||||||||||||||||||||||||||||    
T  21474959 gtaggatttatgaagaggatacaaaagctcattataaggtgatgagtgagcg 21474908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 25756670 - 25756720
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||| || |||||||| ||||| |||||||||||||||    
T  25756670 gatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaag 25756720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 22437095 - 22437043
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| |||||||||||| || || ||||| ||||| |||||||||||||||||    
T  22437095 gatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagag 22437043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 25958724 - 25958863
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgac-aagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgag 164  Q
    |||||||||||||| ||||| || ||||| | || |||| ||||| || || |||||  ||||||||||||| || || |  |||||||||||| |||||    
T  25958724 cagcaaagtcgtccaaagccttatagtgctcttgttgacgaaggggag-caaagactggatgatgagaggagacctaagagtagagatgctcctactgag 25958822  T
Q  165 atagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    || ||||| |  | ||||||  |||||||||||| ||||||    
T  25958823 attgtttgctacaggtgtggtaagaaaggccacaggagtaa 25958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 314 - 558
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||||||||| ||  | ||||||||||| ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  314 atctacgaggaagattcaaaagctcattacaaggtgatgagtgagcggaggggtaagggacaacagagtcgtcctaagccgtacagtccccctgctgaca 413  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | |||  | || ||||||||||| || || || | ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||    
T  414 agggaaagcaacggctgaatgatgagagaagacccaagaggagagatgctcctactgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaa 513  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
     ||||||||||| ||||||||||||||||||||||||||||||||    
T  514 tgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaa 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 22657 - 22377
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||| | |||| |||||| || |||||||||||||| ||||    
T  22657 atctatgaggaggacacaaaagctcattatatggtgatgagtgggcgaaggggtaagggacagtagagtcttcctaaaccatacagtgcccctgccgaca 22558  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || |  || ||||| ||||||||||||||||| |||| |||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||    
T  22557 aaggaaatcaaagactgaatgatgagaggaggcccaataggagagatgctcctgttgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaa 22458  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     |||| ||| |||||||||||||| ||||||| |||||||||||| || |||    ||| |||||||||||||||||||||    
T  22457 tgtttttactaaggatgagaagaaatgcttcaagtgtggtcagaaaggacacaccctagttgattgcaagcgtggtgatgt 22377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 8231 - 8508
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||| || || || |||||||| || |||||||| |||||||| ||||| ||||||||||    
T  8231 atctatgaggaggacatgaaagctcattacaaggtgatgagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgaca 8330  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | |||||| || |||||||||||||| || || | ||||||||||| || ||| || ||||||| ||||||||||||||| ||||||||||||||    
T  8331 agggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaa 8430  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
     |||||||| ||||||||||||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||    
T  8431 tgtttgtactaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtga 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 18445 - 18722
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||| || || || |||||||| || |||||||| |||||||| ||||| ||||||||||    
T  18445 atctatgaggaggacatgaaagctcattacaaggtgatgagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgaca 18544  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||| | |||||| || |||||||||||||| || || | ||||||||||| || ||| || ||||||| ||||||||||||||| ||||||||||||||    
T  18545 agggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaa 18644  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
     |||||||| ||||||||||||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||    
T  18645 tgtttgtactaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtga 18722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 1635 - 1861
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| || ||||||||| | || |||||||||||||||||||||||||||||||||||||| | |||  |||| |    
T  1635 aaagctcattacaaggtgatgagtgagcggaggggtaagggaaaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 1734  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||| ||||| || | |||||||||| ||||||| ||| |||| | |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  1735 atgatgagagaaggcccaagaggagagatgctactgctgaaataatttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatga 1834  T
Q  224 gaagaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||||||||||||||||    
T  1835 gaagaagtgcttcaggtgtggtcagaa 1861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 98347 - 98632
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||| | || ||||| || || |||||||| ||||| ||||||||  | |||||||||||||| || |||||||| ||||| || ||||| | |||    
T  98347 gtaggatcaatgaagaggatacgaaggctcattacaaggtaatgagtgaaaggagaggtaagggacaacagagtcgtccgaagccatatagtgctcatgc 98446  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||  | ||||||||||||||||| ||   ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  98447 tgacaagggtaagcagaggttaaatgatgagaggaggcccaagtggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaag 98546  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| |||||||| || |||||||||||||| ||||||||||||||||| || |||    |||||||||||||||||||||||||    
T  98547 agtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgt 98632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 176527 - 176242
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||| |||||    
T  176527 gtaggatctatgaagaggatacaaaagctcattataaggtgatgagtgagcgtagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgc 176428  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
      |||| | ||  |||||||| ||||||||||||||||| |  | ||||||||||||| | ||||| || ||||| |||||||| || ||||||||||||    
T  176427 caacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcctacagagattgtctgtttcaagtgtggtgaaaaaggccacaag 176328  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| || |||  |   |||||||||||||| || ||||||||  |||| || |||   ||||||||||||||||||||||||||    
T  176327 agtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatgt 176242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 15607 - 15327
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| |||||||| || ||||||||||| |||||||||||||| ||||   | || ||||| || |||||||| |||||||| ||||| ||||||||||    
T  15607 atctatgaggaggaaacgaaagctcattacaaggtgatgagtgatcgaatgagcaaaggacaacagagtcgtccgaagccgtatagtgctcctgctgaca 15508  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    || | | ||||||  | ||||||||||||||||| |||| |||||||||||||||||||||  | || | ||||||||||||||||||||||||||||||    
T  15507 agcgaaagcagaggttaaatgatgagaggaggcccaataggagagatgctcctgctgagattttctgctataagtgtggcgagaaaggccacaagagtaa 15408  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     |||||||| ||||| |||||||||||||||||||||||||||||  | |||    |||||||||||||||||||||||||    
T  15407 tgtttgtactaaggacgagaagaagtgcttcaggtgtggtcagaaatgacacactctagctgattgcaagcgtggtgatgt 15327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 54582 - 54302
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||  |||||||||||||||||||||||||| |||||  | || ||||| || |||||||| |||||||| ||||| ||||||||||    
T  54582 atctatgaggaggacatgaaagctcattataaggtgatgagtgatcgaaggagcaaaggacatcagagtcgtccaaagccgtatagtgctcctgctgaca 54483  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || | ||||||  | ||||||||||||||||| ||||   || |||||| ||||||||| |||||||  |||||||||||||||||||||||||||||    
T  54482 aagggaagcagaggttgaatgatgagaggaggcccaatagatgaaatgctcttgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaa 54383  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     |||||||| || |||||||||||||| |||||||||||||||||||| |||    ||||| |||||||||||||||||||    
T  54382 tgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaagggacacactctagcttattgcaagcgtggtgatgt 54302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 1075 - 1354
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || ||||||||||| ||||||||||||||||| ||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  1075 gtaggatctatgaagaggatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgc 1174  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||||||||  ||||| || ||||||||||||||||| || | ||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||    
T  1175 tgacaagggtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaag 1274  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| | ||||   |  |||||||||||||||||||||||||||||||| || |||   |||||||| || ||||||||    
T  1275 agtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgtgg 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 8284 - 8005
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || ||||||||||| ||||||||||||||||| ||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  8284 gtaggatctatgaagaggatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgc 8185  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||||||||  ||||| || ||||||||||||||||| || | ||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||    
T  8184 tgacaagggtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaag 8085  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| | ||||   |  |||||||||||||||||||||||||||||||| || |||   |||||||| || ||||||||    
T  8084 agtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgtgg 8005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 128; Significance: 3e-66; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 286
Target Start/End: Original strand, 62550 - 62821
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||||||| ||    
T  62550 gaggataccaaagctcattacaaggtgatgagtgagcgtagaggcaaggggcagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagc 62649  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
    ||||| | ||||||||||||||||| || | ||||||||||||| |||| || ||||  || |||||||| |||||||||||||||||||| || |||      
T  62650 agagattgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttaattcaagtgtggtgagaaaggccacaagagtaatgtatgtga 62749  T
Q  215 caaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    | | ||||||||||||||||| |||||||||||||| |  |||   ||||||||||| |||||||| |||||    
T  62750 ccatgatgagaagaagtgctttaggtgtggtcagaaagtacacactttagctgattgtaagcgtggggatgt 62821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 65211 - 65311
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  65211 gatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcaga 65310  T
Q  250 a 250  Q
    |    
T  65311 a 65311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 65100 - 65214
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || ||||||||||| ||||||||||||||| ||||   ||| ||||| || ||||| || ||||| || |||||||||||||| ||||| | ||    
T  65100 gaggatacaaaagctcattacaaggtgatgagtgagagaaggaataatggacaacagagtcgcccgaagccatatagtgcccctgctgataagggcaagc 65199  T
Q  115 agagacttaatgatg 129  Q
    ||||||| |||||||    
T  65200 agagactgaatgatg 65214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 128; Significance: 3e-66; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 39099 - 39346
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| || || ||||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||| || || ||||| |||||||    
T  39099 aggatatatgaggaagatactaaagctcattacaaggtgatgagtgaacgaagaggtaagggacagcagagtcttcctaaaccatatagtgctcctgctg 39198  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | |||||| || ||||||||||||||||| || | ||||||||||||||||||||| ||||| |  |||||||| |||||||||||||||||    
T  39199 acaagggaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagag 39298  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||| ||||||   || ||||||||||||||||||||||||||||||||    
T  39299 taatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaa 39346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 14905 - 14753
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |  |||||| |    ||||| | | |||| || | ||  ||||||||||    
T  14905 aagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgatatgcggcctaagaagaaggatgctcctg 14806  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | ||||| |||||||| |||||||||||||| |||||||||||||| ||||||    
T  14805 cggagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgtttgt 14753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 180753 - 180882
Alignment:
Q  151 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||| |||| | |||||||  || ||||| | ||| |||||||||||||| | ||| ||  | ||||||||||| || ||||| || ||||||||    
T  180753 atgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 180852  T
Q  251 gggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||||  |||| |||||||||||||||||    
T  180853 gggtcatgtgttggctgattgcaagcgtgg 180882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 5429 - 5251
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||| | | ||| ||||| |||||||||||||| ||||| ||| |||| |||||||| ||||| |  || ||| ||||||    
T  5429 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacggtgctcctgctgataagggcaaacaaagagttaatg 5330  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    |||||| |||||| |  | || ||||| |  ||||||||| ||||| |  |  ||||| ||||||||||| ||||||||    
T  5329 atgagatgaggcctagaaagaaagatgttgttgctgagattgtttgctacacttgtggtgagaaaggccataagagtaa 5251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 319772 - 319534
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| ||||||||||| |||||||| ||||| ||||| || || |||||||| |||||||| |||||||| ||||| ||||||||||||| ||    
T  319772 gaggaggacacgaaagctcattacaaggtgataagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaggata 319673  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     |||||| || ||||||||||||||||| |||| ||||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||| || ||    
T  319672 agcagaggctgaatgatgagaggaggcccaataggagagatgctcctgctgggattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtctg 319573  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    |   || ||||||||||||||||||||||||||||||||    
T  319572 tgataaagatgagaagaagtgcttcaggtgtggtcagaa 319534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 96 - 250
Target Start/End: Complemental strand, 326151 - 325998
Alignment:
Q  96 cctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggcc 195  Q
    |||||| ||||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||||| ||||| |  |||||||||||||||| ||    
T  326151 cctgctaacaagggtaagcagaggctgaatgatgagaggaggcc-aataggagagatgctcctgctgagattgtttgctacaagtgtggcgagaaagacc 326053  T
Q  196 acaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||| || |||   || ||||||||||||||||||| ||||||||||||    
T  326052 acaagagtaatgtctgtgataaagatgagaagaagtgcttcaagtgtggtcagaa 325998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 6 - 283
Target Start/End: Complemental strand, 9149 - 8872
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||| |||||||| ||||||||||||| |||||  | || |||||||| |||||||| |||||||| ||||| ||||||||||    
T  9149 atctatgaggaggacacgaaatctcattattaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgaca 9050  T
Q  106 agggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || | |||||  || ||||||||||| || || || | |||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||    
T  9049 aagggaagcagaagctgaatgatgagagaagacccaagaggagagatgctcctgatgagattgtttgttataagtgtggcgagaatggccacaagagtaa 8950  T
Q  206 cgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
     |||||||| || |||||||||||||| ||||||||||||||||| || |||    ||||||||||||||||||||||    
T  8949 tgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtga 8872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 286
Target Start/End: Original strand, 21742399 - 21742670
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||| | |||||||| || ||||| ||||| ||| |||||||||||| ||    
T  21742399 gaggatacgaaagctcattacaaggtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctactgacaagggtaagc 21742498  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||||| ||||||||||||||||| || | ||||||||||||| |||||||  |||| || |||||||| |||||||||||||||||||| || ||| |    
T  21742499 agagactgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtatgtga 21742598  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    || | ||||||||||||||||| |||||||||||||| || |||   || ||||||||||||||||| |||||    
T  21742599 ccga-gatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatgt 21742670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 24 - 286
Target Start/End: Original strand, 22015601 - 22015863
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| || || ||||||||||| |||||||| |||||||| ||||| |||||||||||||||| | ||||| | |    
T  22015601 aaagctcattacaaggtgatgagtgagcgtaggggaaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagaataa 22015700  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| || | ||||||||||||| |  | || ||||| || |||||||| || |||||||| || ||||| ||||||   |  |||||    
T  22015701 atgatgagaggaggccaaagaagagagatgctcctacaaatattgtttgattcaagtgtggagaaaaaggccaaaaaagtaatgtttgtgatagagatga 22015800  T
Q  224 gaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||||||||||||||||||||||||| || |||   |||||||||||||||||||| |||||    
T  22015801 gaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcgtggggatgt 22015863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 286
Target Start/End: Original strand, 21738883 - 21739154
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || ||||||||||| |||||||||||||| || |||||||||||||| || |||||||| ||||| || || |||| |||||||||||||| ||    
T  21738883 gaggatacgaaagctcattacaaggtgatgagtgaccgcagaggtaagggacaacagagtcgtccgaagccatatagcgcccatgctgacaagggtaagc 21738982  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||| | ||||||||||||||||| || | ||||| ||||||| |||||||  |||| || |||||||| |||||||||||||||||||| |||||| |    
T  21738983 agagattgaatgatgagaggaggcctaagaggagaggtgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtttgtga 21739082  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     | | ||||||||||||||||| |||||||||||||| || |||   |||| |||||| |||||||| |||||    
T  21739083 tcga-gatgagaagaagtgctttaggtgtggtcagaaaggacacaccttagttgattgtaagcgtggggatgt 21739154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 24 - 275
Target Start/End: Original strand, 20832757 - 20833007
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| |  || ||||| |||||||||||||| | |||||| || |    
T  20832757 aaagctcattacaaggtgatgagtgaccgtagaggcaagggacagcagagtcgtcctaaaca-tatagtgctcctgctgacaagggaaagcagaggctga 20832855  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    ||||||||||||| || || | |||||||||||||| ||| || ||||| |  ||||||||||||||||||||||||||||| |||||||| || |||||    
T  20832856 atgatgagaggagacccaagaggagagatgctcctgttgatattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 20832955  T
Q  224 gaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaag 275  Q
    |||||| || ||||||||||||||||| || |||    ||||||||||||||    
T  20832956 gaagaattgtttcaggtgtggtcagaaaggacacacactagctgattgcaag 20833007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 24096450 - 24096697
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||| || ||||||||||| || || ||||| |||||||    
T  24096450 aggatatatgaggaagacaccaaagctcattacaaggtgacgagtgagcgaagaagtaagggacaacagagtcgtcctaaaccttatagtgctcctgctg 24096549  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || |  |||||  | ||||||||||||||||| || | |||||||||||||| |||||| |||||||| |||||||| || ||||||||||||||    
T  24096550 acaaaggaaaacagaggatgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgtttcaagtgtggtgaaaaaggccacaagag 24096649  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||| | ||||   |  ||||||| |||||| || ||||||||||||||    
T  24096650 taatgcttgtggtagagatgagaggaagtgttttaggtgtggtcagaa 24096697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 21961567 - 21961305
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | ||||||||||||||||| | |||||||||||| |||||||| ||| ||||||| || | |||||    
T  21961567 gacaccaaagctcattacaagataatgagtgagaggagaggtaagggacagcagaatcgtcctaagccttacagtgctccttctgacaaaggaaagcaga 21961468  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| ||||| || || | ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   ||    
T  21961467 agatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaa 21961368  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| ||||||||||||||||||||||||||| |||   |||||||| || ||||||||    
T  21961367 agatgagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgtaagcgtgg 21961305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 31536847 - 31537109
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| || ||||| ||||||||||| || | |||||    
T  31536847 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcaga 31536946  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
    |  | |||||||| ||||| || || | ||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| || ||||||   |     
T  31536947 ggatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtag 31537046  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| |  || |||||||||||||||||||||||||||   |||||||| |||||||||||    
T  31537047 agatgatagaaaatgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 31537109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 52989280 - 52989019
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||  | ||||||||| | || |||||||||||||||| |||||||||||| |||||||| ||||||||||| || | |||||    
T  52989280 gacaccaaagctcattacaaa-taatgagtgagaggaggggtaagggacagcaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 52989182  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   ||    
T  52989181 agatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaa 52989082  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| |||||| ||||||||||||||||||||||||   |||||||| || ||||||||    
T  52989081 agatgagaggaagtgtttcaggtgtggtcagaagggtcacaatttagctgaatgtaagcgtgg 52989019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 19857827 - 19857582
Alignment:
Q  5 gatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgac 104  Q
    |||||| || ||||| || || |||||||| |||||||||||||| || |||||||||||||| || ||||||||||| || || ||||| |||||||||    
T  19857827 gatctatgaagaggatactaaggctcattacaaggtgatgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgac 19857728  T
Q  105 aagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagta 204  Q
    ||||||| ||||||  | ||||||||||||||||| || | |||||||||| || | ||||| ||||| || |||||||| || ||||||||||||||||    
T  19857727 aagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgcttctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagta 19857628  T
Q  205 acgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    | || |||   |  ||||||||||| ||||||||||||||||||||    
T  19857627 atgtctgtgatagagatgagaagaaatgcttcaggtgtggtcagaa 19857582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 20074559 - 20074821
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| ||||||||  |||||||||| || | |||||    
T  20074559 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgcttctgctgacaaaggaaagcaga 20074658  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | | |||||| |||||||  || | ||||||||||||  ||||||| || ||||  |||||||| ||||||||||||||||| || |||||||  ||    
T  20074659 agatgagtgatgacaggaggcttaagaggagagatgctcccactgagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgtagtaa 20074758  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| |||||||||||||||||||||||||||||||   || ||||| |||||||||||    
T  20074759 agatgagaggaagtgcttcaggtgtggtcagaagggtcacagcttggctgaatgcaagcgtgg 20074821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 20297923 - 20297661
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||| |||||||||| |  ||||    
T  20297923 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacatcagaatcgtcctaagccttacagtgctcctactgacaagggaaaacaga 20297824  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | ||||||||||||||||||||| |||||||  |||||||| |||||| ||||||||||||| ||||||   ||    
T  20297823 agatgggtgatgacaggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgtttgtggtaa 20297724  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| ||||||||||||||||||| |||||||||||    ||||||| |||||||||||    
T  20297723 agatgagaggaagtgcttcaggtgtggttagaagggtcacagcctagctgaatgcaagcgtgg 20297661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 48426413 - 48426151
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  48426413 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 48426314  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  48426313 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 48426214  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  48426213 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 48426151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 38909676 - 38909938
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||| | | || ||||||||||| || | ||||||||| || |||||||| ||||||||||| || | |||||    
T  38909676 gacaccaaagctcattacaagataatgagtgggaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcaga 38909775  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
    |  |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  38909776 ggatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 38909875  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  38909876 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 38909938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 37680589 - 37680327
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||| ||||||| || | |||||    
T  37680589 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcaga 37680490  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | ||||||| |||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  37680489 agatgggtgatgataggaggcccaagaggagagatactcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 37680390  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  37680389 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 37680327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 16379618 - 16379407
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| || || |||||||| |||||  ||| |||||| | ||| ||||| || || |||||||||||||| ||||||||| ||||||    
T  16379618 aggatttatgaggaggatactaaggctcattacaaggttgtgaatgagcggaaaggcaagggtcaacagagtcgtcctaagccttacagtgcctctgctg 16379519  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||| |  |||||| |||||||||||||||||||||  | || ||||| |  ||||||||| ||||| | |   ||||| |||||||||||||| ||    
T  16379518 ataagggcaaacagagagttaatgatgagaggaggccgagaaagaaagatgttgttgctgagattgtttgctatgcttgtggtgagaaaggccacaaaag 16379419  T
Q  203 taacgtttgtac 214  Q
    ||| ||||||||    
T  16379418 taatgtttgtac 16379407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 21228391 - 21228600
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagc-gaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    |||||||| |||||||| || || |||||||| |||||  ||| ||||| |||||  |||||| ||||| ||||| |||||||| || ||||||||||||    
T  21228391 aggatctatgaggaggatactaaggctcattacaaggttgtgaatgagcagaagac-taagggccagcagagtcgccctaagccctatagtgcccctgct 21228489  T
Q  102 gacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaaga 201  Q
    || |||||||  |||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| |||||||| || ||||||||||||||||||||||    
T  21228490 gataagggtaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaaga 21228589  T
Q  202 gtaacgtttgt 212  Q
    |||| ||||||    
T  21228590 gtaatgtttgt 21228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 280
Target Start/End: Complemental strand, 18273313 - 18273045
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || || |||||||||||||| | ||||||||| ||    ||||| |||||| ||||||| ||||| |||||||| |||| |||||| ||      
T  18273313 gaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgttgacaaagggg 18273214  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     ||| ||| | |||||||||||||| || || |  ||||||| |||| ||||||| |||||||  |||||||| ||||| |||||||||||||| |||||    
T  18273213 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 18273114  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     |     || ||||||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||    
T  18273113 cattggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtgg 18273045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 41350560 - 41350614
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  41350560 ggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggta 41350614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 16347433 - 16347541
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  16347433 aggatctacgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 16347532  T
Q  103 acaagggta 111  Q
    |||||||||    
T  16347533 acaagggta 16347541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 16354081 - 16354189
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||||||||| ||||| || || ||||| || |||||  ||| |||| | |  || ||||||||||| |||||||||||||||||||||||||| ||||    
T  16354081 aggatctacgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctg 16354180  T
Q  103 acaagggta 111  Q
    |||||||||    
T  16354181 acaagggta 16354189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 20853604 - 20853872
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || || |||||||||||||||||||| |||  |||   |||||| |||   ||||| || ||||| |||||||| ||| || |||| || |    
T  20853604 gaggaggatacaaaggctcattataaggtgatgagcgagaaaaggaataagggtcagagtagtcgcccgaagccctacagtgctcctactaacaaaggca 20853703  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
      || ||| | ||||||||||||  ||| ||   |||| ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||| | |||    
T  20853704 aacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 20853803  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||| | ||||||||||| || ||||| || ||||||||||||||  |||| ||||| |||||||||||    
T  20853804 cacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtgg 20853872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 21045046 - 21045158
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | ||| ||| |||||||||||||||| || |  | || ||||||| |||    
T  21045046 aagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggcaagcaaagagttaatgatgagaggagaccaagaaagaaagatgctactg 21045145  T
Q  160 ctgagatagtttg 172  Q
    ||||||| |||||    
T  21045146 ctgagattgtttg 21045158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 51330384 - 51330430
Alignment:
Q  57 ggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  51330384 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 51330430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 33387924 - 33387975
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  33387924 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggta 33387975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 17041849 - 17042057
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||||||||| ||||| |||| ||||||||| |||||  | | |||| | ||||  |||||| ||||| ||||| |||||||| || ||||||||||    
T  17041849 gtaggatctacgaagaggataccagagctcattacaaggttgttaatgagaggaagac-taagggccagcagagtcgccctaagccttatagtgcccctg 17041947  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| | ||||||| |    ||||| ||| |||| || | ||  ||||||||| | |||||  ||||||| || ||||||| ||||||||||||    
T  17041948 ctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcggagat-ttttgtttcaactgtggcgggaaaggccacaa 17042046  T
Q  200 gagtaacgttt 210  Q
    |||||| ||||    
T  17042047 gagtaatgttt 17042057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 22117232 - 22117102
Alignment:
Q  9 tacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagg 108  Q
    |||||||| || || || |||||||| |||||  ||| |||| | | ||| ||||| |||||||||||||| ||||| |||||||  |||||||| ||||    
T  22117232 tacgaggaagatactaaggctcattacaaggttttgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgttcctgctgataagg 22117133  T
Q  109 gtaggcagagacttaatgatgagaggaggcc 139  Q
    | |  || ||| |||||||||||||||||||    
T  22117132 gaaaacaaagagttaatgatgagaggaggcc 22117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 19109834 - 19109791
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  19109834 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 19109791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 21833766 - 21833723
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  21833766 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 21833723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 21752527 - 21752465
Alignment:
Q  47 tgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaaggg 109  Q
    |||||||| || |||||| ||||| |||||||||||||| ||||||||| ||||||| |||||    
T  21752527 tgagcgaaaagctaagggtcagcagagtcgtcctaagccttacagtgccactgctgataaggg 21752465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 21842676 - 21842633
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || |||||||||||||||||||||||||| |||||    
T  21842676 aagggacatcagagtcgtcctaagccgtacagtgcccccgctga 21842633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 22400784 - 22400741
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||    
T  22400784 aagggagagcagagtcgtcctaagctgtacagtgcccctgctga 22400741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 22402060 - 22402010
Alignment:
Q  59 taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaaggg 109  Q
    |||||| ||||| ||||| |||||||| ||||||||||||||||| |||||    
T  22402060 taagggtcagcagagtcgccctaagccttacagtgcccctgctgataaggg 22402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 5706 - 5436
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| |||||||||||||| || |||||||||||||  ||||  ||||||||||| |||| ||  |||||||||||||||||| |||||||||||| ||    
T  5706 gaggataccaaagctcattacaaagtgatgagtgagcatagagtcaagggacagcagagtcatcggaagccgtacagtgcccctactgacaagggtaagc 5607  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||| | ||||||||||||||||| || | ||||||||||||| |||| || |||||||| |||||||| || ||||||||||||||||| |||||| |    
T  5606 agagattgaatgatgagaggaggcc-aagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtga 5508  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    || | |||||||||||||||||||||||||||||||| || |||   ||||||||||| |||||||| |||||    
T  5507 ccga-gatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgt 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 37479 - 37227
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || || || || ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||| | |||    
T  37479 gtaggatctatgaagaagatacgaaagctcattacaaggtgatgagtgaacgtagaggtaagggacagcagagtcgtccgaagccgtatagtgctcttgc 37380  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
     |||||||||| ||||||| | ||||||||||||||||| || | ||||||  ||||| |||| ||  |||| || ||||||||||||||||||||||||    
T  37379 cgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagacactcctactgatattttttgcttcaagtgtggcgagaaaggccacaag 37280  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
    ||||| ||||||   || |||||||||||||||||||||||||||||||||||    
T  37279 agtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaaggg 37227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 50645 - 50366
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || || || || ||||||||||| ||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||| |||||||||||    
T  50645 gtaggatctatgaagaagatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtggtccgaagccgtatagtgcccctgc 50546  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||| |||   ||||||||||||||||| || | ||||||||||||| |||| || |||||||| |||||||| || |||| |||||||    
T  50545 tgacaagggtaagcatagatggaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaagaccacaag 50446  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| |||||| ||| | |||||||||||||| ||||||||||||||||| || |||   ||||||||||| ||||||||    
T  50445 agtaatgtttgtgaccga-gatgagaagaagtgtttcaggtgtggtcagaaaggacacaccttagctgattgtaagcgtgg 50366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 4218 - 4501
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || |||||||| || ||| ||||||| |||||||||||||| || ||||| |||||||| || |||||||| |||||||||| ||| |||||    
T  4218 gtaggatttatgaggaggatacgaaa-ctcattacaaggtgatgagtgaacgtagaggcaagggacaacagagtcgtccgaagccgtacactgctcctgc 4316  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||  | ||||||||||||||||| || | ||||||||||||| |||| || ||||| || |||||||||||||||||||| |||    
T  4317 tgacaagggtaagcagagtttaaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgcttcaagtgtggcgagaaaggccaaaag 4416  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatg 285  Q
    ||||| ||||||   |  ||||||||||| |||||||||||||||||||| || |||   ||||||||||| |||||||||||||    
T  4417 agtaatgtttgtgatagagatgagaagaaatgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcgtggtgatg 4501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 284
Target Start/End: Original strand, 16979 - 17113
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    |||| ||||||||||||   |||||| || ||||| ||||||||||||||||| |  |||||| |  |||| | |||||| || ||| |||||||  |||    
T  16979 gatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagcactgtttgtccagaggaggtgaagaaatgtttctggtgtggcaaga 17078  T
Q  250 agggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||||||||   |||||||| ||||||| |||||||    
T  17079 agggtcacacattagctgactgcaagcatggtgat 17113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 649 - 896
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||||| |||||||||||| |||||||||||||| || |||||||||||||| || |||||||| |||||||| | ||| |||||||    
T  649 aggatttatgaggaggacaacaaagctcattacaaggtgatgagtgaacgcagaggtaagggacaacagagtcgtccgaagccgtataatgctcctgctg 748  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| | ||||  | ||||||||||||||||| || | ||||||||||||| | ||||| ||||| || |||||||| || ||||||||||||||    
T  749 acaagggtaagaagaggttaaatgatgagaggaggcccaagaggagagatgctcctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagag 848  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||||   |  ||||||||||||||||||||||||||||||||    
T  849 taacgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaa 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 280
Target Start/End: Complemental strand, 34875 - 34598
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||||| ||||||||||| |||||||||||||| || ||||| ||||||||||| |||||||| |||| ||| ||||| |||||||    
T  34875 aggatttatgaggaggacacaaaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagctgtatagtgctcctgctg 34776  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||| ||  | ||||||||||||||||| || | ||||||||||||| |||| || |||||||| |||||||| |||||||||||||||||    
T  34775 acaagggtaagcaaaggttaaatgatgagaggaggcccaagaggagagatgctcctactgacattgtttgtttcaagtgtggtgagaaaggccacaagag 34676  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||| || |||   |  ||||||||||||||||||||||||||| |||| || |||   |||| |||||| ||||||||    
T  34675 taatgtctgtgatagagatgagaagaagtgcttcaggtgtggttagaaaggacacacattagttgattgtaagcgtgg 34598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 280
Target Start/End: Complemental strand, 17157 - 16898
Alignment:
Q  21 accaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagac 120  Q
    |||||||||||||| ||||||||||||||||| | ||| |||||||| || |||||||| |||||||| ||||| ||||| |||||||||| ||||| ||    
T  17157 accaaagctcattacaaggtgatgagtgagcgcaaaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgccgacaagggtaagcagaaac 17058  T
Q  121 ttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaagg 219  Q
    | ||||||||||||||||| || | ||||||||||||| |||||||  ||||||| |||||||| |||||||||||||||||||| || ||| | | | |    
T  17057 tgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgtttcaagtgtggagagaaaggccacaagagtaatgtgtgtgatcga-g 16959  T
Q  220 atgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |||||||||||||||| |||||||||||||| || |||   || |||||||||||||||||    
T  16958 atgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 16898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 70648 - 70369
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||| || ||||| ||||| |||||    
T  70648 gtagaatctatgaagaggataccaaagctcattataaagtgatgagtgagcgcagaggtaagggacaacagagtcgtccgaaaccgtatagtgctcctgc 70549  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||||| || ||||||||||||||||| || | ||||||||||||| |||||||  |||| ||||||||||| |||||||||||||||    
T  70548 tgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgctttaagtgtggtgagaaaggccacaag 70449  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || ||| ||| | |||||||||||||| ||||| ||||| ||||| || |||   || |||||||||||||||||    
T  70448 agtaatgtgtgtgaccga-gatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtgg 70369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 117; Significance: 1e-59; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 284
Target Start/End: Complemental strand, 116027 - 115819
Alignment:
Q  76 gtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttt 175  Q
    |||||||||||||||| ||||||||||  ||||| | |||  |||| ||||||||||| ||||| ||    |||||  |||||||||| |||||||| ||    
T  116027 gtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatgatgagagaaggcccaagggaagagacactcctgctgaaatagtttgctt 115928  T
Q  176 taagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaag 275  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  115927 taagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaag 115828  T
Q  276 cgtggtgat 284  Q
    |||||||||    
T  115827 cgtggtgat 115819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 93808 - 93937
Alignment:
Q  151 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||||||||| |||| | |||||||  || ||||| | ||| |||||||||||||| | ||| ||  | ||||||||||| || ||||| || ||||||||    
T  93808 atgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 93907  T
Q  251 gggtcacttgttagctgattgcaagcgtgg 280  Q
     |||||  |||| || ||||||||||||||    
T  93908 aggtcatgtgttggcggattgcaagcgtgg 93937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 107600 - 107643
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||||| || |||||||||||||||||||||||||| |||||    
T  107600 aagggacaacagagtcgtcctaagccgtacagtgcccccgctga 107643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 8602 - 8553
Alignment:
Q  153 gctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| |||||||||  | |||||||| |||||||||||||||||||||||    
T  8602 gctcttgctgagattatctgttttaattgtggcgagaaaggccacaagag 8553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 1018 - 799
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| ||||||||||||||||| |||||||||||||| || ||||||||||| || || ||||| |||||||||||||||| ||||||| | ||||    
T  1018 gctcattacaaggtgatgagtgagcgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagagattgaatg 919  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaa 226  Q
    ||||||||||||| || | ||||||||||||||||||||| ||||| |  ||||||||| ||||||||||||||||||| || |||   || ||||||||    
T  918 atgagaggaggcctaagaggagagatgctcctgctgagattgtttgctacaagtgtggctagaaaggccacaagagtaatgtctgtgataaagatgagaa 819  T
Q  227 gaagtgcttcaggtgtggtc 246  Q
    ||||| ||||||||||||||    
T  818 gaagtacttcaggtgtggtc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 154032 - 153753
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || |||||||| || ||||||||||| ||||||||| |||| | |||||||||||||||||| |||||||| ||||| || ||||| |||||    
T  154032 gtaggatttatgaggaggagacgaaagctcattacaaggtgatgggtgaacaaagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgc 153933  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| |||| |||| ||||||||||||||||| || | ||||||||||||  ||||||| ||||| || |||||||| || ||| |||| |||    
T  153932 tgacaagggtaagcagcgactgaatgatgagaggaggcccaagaggagagatgctcccactgagattgtttgcttcaagtgtggtgaaaaaagccataag 153833  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || |||   |  |||||||||||||||||||||||||||||||| || |||   ||||||||||| ||||||||    
T  153832 agtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcgtgg 153753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 5963 - 5695
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || |||||| |||| ||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||   ||||||||||||||||| ||    
T  5963 gaggatacgaaagcttattacaaggtgatgagtgagcgcagaggtaagggacaacatagtcgtccgaagccgtatag---ccctgctgacaagggtaagc 5867  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    ||||| | ||||||||||||||||  || | ||||||||||||| |||||||| |||| || |||||||| ||||||||||||||||||||||| ||| |    
T  5866 agagattgaatgatgagaggaggcttaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaaggccacaagagtaacgtgtgtga 5767  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     | | ||||||||||||||||| |||||||||||||| || |||   ||||||||||| |||||||| |||||    
T  5766 tcga-gatgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgt 5695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 11507 - 11786
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || || ||||||||||||||||| ||| | ||||||||| | || ||||||||||| || | |||||||||||| |||| ||| | |||    
T  11507 gtaggatttatgaagaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcttgc 11606  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| || | |||||   |   |||||| |||| ||| || | ||||||||| || | |||||| || || |  ||||||||  ||||||||||||||    
T  11607 tgacaaaggaaagcagaagatgggtgatgataggaagcccaagaggagagatgcaccagatgagattgtatgatacaagtgtggtaagaaaggccacaag 11706  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || |||   |  ||||| | |||||||||||||||||||||||||||||||   ||||||||  ||||||||||    
T  11707 agtaatgtatgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaaagcaagcgtgg 11786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 12 - 277
Target Start/End: Original strand, 4984 - 5249
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||| || | ||||||||||| || || ||||| |||||||||||||| |    
T  4984 gaggaagacactaaagctcattacaaggtgatgagtgaacgaagaggtaaaggaaagtagagtcgtcctaaaccatatagtgctcctgctgacaagggaa 5083  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     ||| || || ||| |||||||| |||| |  | ||||||||||||||||||||| ||||| |  ||||||||||| ||||||||||||||||| || ||    
T  5084 agcaaaggctgaataatgagaggtggcctaggaggagagatgctcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctg 5183  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcg 277  Q
    |   |||||||||||||||||||||||||||||||||||||| |||   ||||||||||| |||||    
T  5184 tgataaggatgagaagaagtgcttcaggtgtggtcagaagggacacactttagctgattgtaagcg 5249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 2367 - 2198
Alignment:
Q  5 gatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgac 104  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  2367 gatctatgaggaggacacaaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctactgac 2268  T
Q  105 aagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgtt 174  Q
    || || | ||| ||  | |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  2267 aaaggaaagcaaaggttgaatgatgagaggaggcggaataggagagatgctcctgctgagatagtttgtt 2198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 43234 - 42989
Alignment:
Q  5 gatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgac 104  Q
    |||||| || ||||| || ||||||||||| |||||||||||| ||||  |||| ||||||||| | |||||||| |||||||| |||||||||||||||    
T  43234 gatctatgatgaggatacaaaagctcattacaaggtgatgagtaagcgccgaggcaagggacagtagagtcgtccgaagccgtatagtgcccctgctgac 43135  T
Q  105 aagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagta 204  Q
    |||||||  |||||  | ||||||||||||||||| || | ||||||||||||| |||||||| ||||||| |||||| | |||||||||||||||||||    
T  43134 aagggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgagataatttgtttcaagtgttgtgagaaaggccacaagagta 43035  T
Q  205 acgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    | |||||| ||| | ||||||||||||||||| |||||| |||||||    
T  43034 atgtttgtgaccga-gatgagaagaagtgctttaggtgtagtcagaa 42989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 590 - 858
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||| || |||||||||||||| |||||||||||||| |  ||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||| |    
T  590 gaggaagataccaaagctcattacaaggtgatgagtgaacatagaggcaagggacagcaaagtcgtccgaagccgtatagtgctcctgccgacaagggga 689  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     ||||||  | ||||||||||||||||| || | ||||||||||||| | || || | ||| || |||||||| || ||||||||||||||||| |||||    
T  690 agcagaggttaaatgatgagaggaggcccaagaggagagatgctcctacggacattgattgcttcaagtgtggtgaaaaaggccacaagagtaatgtttg 789  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |   |  ||||||||||||||||||||||||||||||||||| |||    |||||||||| ||||||||    
T  790 tgatagagatgagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagcgtgg 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 308 - 555
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||||  ||||||||||| |||||||||||| | || ||||||||||||||||| |||||||| |||||||| ||||| ||| |||    
T  308 aggatttatgaggaggacaggaaagctcattacaaggtgatgagtaaacgtagaggtaagggacagcacagtcgtccgaagccgtatagtgctccttctg 407  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||| ||||||  | ||||||||||| ||||| || | |||||||||||||   || || |||||||| ||||||||||||||||||||||| ||    
T  408 acaagggtaagcagaggttaaatgatgagagaaggcccaagaggagagatgctcctatagatattgtttgtttcaagtgtggcgagaaaggccacaaaag 507  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||  ||||||   |  ||||||||||||||||||||||||||||||||    
T  508 tagtgtttgtgatacagatgagaagaagtgcttcaggtgtggtcagaa 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 6344 - 6066
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || ||||||||||| ||||||||||| |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| ||||| ||| |    
T  6344 gtaggatttatgaggaggacacgaaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctac 6245  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||| ||  | ||||||||||||||||| || | ||||||||||| | |||| || ||||| || |||||||| || ||||||||||||    
T  6244 tgacaagggtaagca-aggttaaatgatgagaggaggcccaagaggagagatgctcttactgacattgtttgcttcaagtgtggtgaaaaaggccacaag 6146  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || |||   |  |||||||||||||||||||| ||||||||||| || |||    |||||||||||||||||||    
T  6145 agtaatgtctgtgatagagatgagaagaagtgcttcagatgtggtcagaaaggacacacactagctgattgcaagcgtgg 6066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 1047 - 1240
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||| |||| |||||||||||    
T  1047 gaggaggacacaaaagctcattataaggtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgttgacaagggta 1146  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
     ||||||||| ||||||||||||||||| |  | ||||||||||||| || |||| || |||||||| ||||| || |||||||||||| ||||    
T  1147 agcagagactgaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaa 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 30067 - 29782
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || ||||| || || |||||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||  ||||| |||||    
T  30067 gtagaatctatgaagaggatacaaaggctcattataaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaaaccgtctagtgctcctgc 29968  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| |||| ||||||||| ||||||||||||||||| |  | |||||||||||||  ||||||||| | ||| |||||||| || || |||||||||    
T  29967 tgacaaaggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcctattgagatagtctatttcaagtgtggtgaaaagggccacaag 29868  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| ||||||| | | |||||||||||||| ||| |||||||   ||| || |||    ||||||| |||||||||||||||||    
T  29867 agtaatgtttgtaaccatgatgagaagaagtgtttccggtgtgggacgaaaggacacacaatagctgagtgcaagcgtggtgatgt 29782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 28060 - 28253
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||| |||| |||||||||||    
T  28060 gaggaggacacaaaagctcattataaggtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgttgacaagggta 28159  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
     ||||||||| ||||||||||||||||| |  | ||||||||||||| || |||| || |||||||| ||||| || |||||||||||| ||||    
T  28160 agcagagactgaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaa 28253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 5666 - 5877
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || || || || ||||||||||| ||||||||||||||||| ||||| ||||||||||| |||| ||| |||||||| ||||| |||||    
T  5666 gtaggatctatgaagaagatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcatccgaagccgtatagtgctcctgc 5765  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| ||||||||| ||||||||||||||||| || | ||||||||||||| |||| || |||| ||  |||||||| || ||||||||||||    
T  5766 tgacaagggtaagcagagactgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttattacaagtgtggtgaaaaaggccacaag 5865  T
Q  201 agtaacgtttgt 212  Q
    ||||| ||||||    
T  5866 agtaatgtttgt 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 636 - 918
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || ||||||||||| ||| ||||||| ||||||||||||||  | |||||||||||||| || |||||||| ||||| || ||| | |||||    
T  636 gtaggatttatgaggaggacacgaaatctcattacaaggtgatgagtgaatgtagaggtaagggacaacagagtcgtccgaagccatatagtactcctgc 735  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||||| |||| |||| ||||||||||||||||| || | |||||||||||||   || || ||||| || |||||||| || ||||||||||||    
T  736 tgacaagggtaagcagcgactgaatgatgagaggaggcccaagaggagagatgctcctatggatattgtttgcttcaagtgtggtgaaaaaggccacaag 835  T
Q  201 agtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtga 283  Q
    ||||| || |||   |  ||||||||||||||||||| |||||||||||| || |||    |||||||||| |||||||||||    
T  836 agtaatgtctgtgatagagatgagaagaagtgcttcatgtgtggtcagaaaggacacacactagctgattgtaagcgtggtga 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 71 - 297
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| | ||| |||||||||||||||| ||||||  | |    
T  71 aaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtaaaatgctcctgctgacaagggtaagcagaggttaa 170  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| || |  ||||| |||||| |||| || ||||| || ||||||||||||||||||||||||||||| || |||   |  |||||    
T  171 atgatgagaggaggcccaagagcagagaggctcctactgatattgtttgcttcaagtgtggcgagaaaggccacaagagtaatgtctgtgatagagatga 270  T
Q  224 gaagaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||| ||||||||||||    
T  271 gaagaagtgcttcatgtgtggtcagaa 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 4068 - 4347
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||||||||| || ||||| || |||||||||||||| |||||||||||||| ||||||||||||||| | |||||||| || ||||| ||||| |||||    
T  4068 gtaggatctatgaagaggatacaaaagctcattataaagtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctgc 4167  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  |||||  | ||||||||||||||||| || | ||||||||||||| |||||||  |||| || |||||||| ||||||| | ||||     
T  4168 tgacaaaggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaagactacaaa 4267  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || ||| | | | ||||||||||||||||| |||||||||||||| || |||   || |||||||||||||||||    
T  4268 agtaatgtgtgtgatcga-gatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 4347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 33138 - 33342
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| |||||||    
T  33138 aggatatatgaggaagacaccaaagctcattacaaggtgatgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccatacagtgctcctgctg 33237  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || |  |||||  | ||||||||||||||||| || | |||||||||||||| ||| || |||||||| |||||||| || ||||||||||||||    
T  33238 acaaaggaaaacagaggatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccacaagag 33337  T
Q  203 taacg 207  Q
     ||||    
T  33338 caacg 33342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 116141 - 115953
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||| |||||||||||||||| | ||||||| |    
T  116141 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagactga 116042  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    |||||||||||||||| || | ||| ||||||||| |||| || |||||||| | |||||| || ||||||||||||||||| ||||||    
T  116041 atgatgagaggaggcctaagaggagggatgctcctactgatattgtttgtttcatgtgtggtgaaaaaggccacaagagtaatgtttgt 115953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 1388 - 1650
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||  | ||||||||| | || |||||||||||||| | ||||| |||||| |||||||| ||||||||||| || | |||||    
T  1388 gacaccaaagctcattacaacataatgagtgagaggaggggtaagggacagcagaatcgtcataagccttacagtgctcctgctgacaaaggaaagcaga 1487  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | | |||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| |||||||| ||||||||||| ||||||   ||    
T  1488 agatgagtgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggacacaagagtaatgtttgtggtaa 1587  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| ||||||||||||||||||||||||||| |||   |||||||| |||||||||||    
T  1588 agatgagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgcaagcgtgg 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 42258 - 41996
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||||||| || | |||||    
T  42258 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 42159  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |     
T  42158 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 42059  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  42058 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 41996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 52191 - 51906
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || ||||| || || ||||||||||| |||||||||||||| ||||||||||||||||| || ||||| || | ||| ||||| |||||    
T  52191 gtaggatttatgaagaggatacaaaggctcattataaagtgatgagtgagcgcagaggtaagggacagcagagccgtccgaaactgtatagtgctcctgc 52092  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||||| || ||||||||||||||||| |  | ||||||||||||| |||||||  | ||||| |||||||| |||||||||||||||    
T  52091 tgacaaaggtaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattatctgtttcaagtgtggtgagaaaggccacaag 51992  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||| || ||| | | | ||||||||||||||||| ||||||||| |||| || |||   |||||| ||||||||| |||||||||    
T  51991 agtaatgtatgtgatcga-gatgagaagaagtgctttaggtgtggtaagaaaggacacactttagcttattgcaagcatggtgatgt 51906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1251 - 1452
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || ||||| ||||| ||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  1251 gtaggatatatgaggaagacacaaaagctcattacaaggtgatgagtgagaggagaggtaagggacagcagagtcgtcctaagccttacagtgctcctgc 1350  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    ||||||||| |  |||| | | |||||||| |||||||| || | ||||||||||||||||||||| || ||||  |||||||| || ||||||||||||    
T  1351 tgacaagggaaaacagaaaatgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaag 1450  T
Q  201 ag 202  Q
    ||    
T  1451 ag 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 3391 - 3215
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || ||||||||||||||||||||||||||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||||||||| ||    
T  3391 gaggatacgaaagctcattataaggtgatgagtgagcgcagaggcaagggacaacagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagc 3292  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaa 191  Q
    ||||| | ||||||||||||||||| || | ||||||||||||| |||||||  |||| || |||||||| ||||||    
T  3291 agagattgaatgatgagaggaggcccaagaggagagatgctcctactgagattatttgcttcaagtgtggggagaaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 429 - 323
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||| || |||||  ||||||| ||| |  ||| |||||| | || |||||| ||||| ||||  |||||||| ||||||||||||||||    
T  429 aggatctatgaggaagataccaagactcattacaagattgtgaatgagcggaaagctaagggtcagcagagtctccctaagccttacagtgcccctgctg 330  T
Q  103 acaaggg 109  Q
    | |||||    
T  329 ataaggg 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 23704 - 23966
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||| ||||||||||| | ||||||||| | || ||||||||||| || |||||||||||||| |||||||| ||||||||||| || | |||||    
T  23704 gacaccaaaactcattataagattatgagtgagaggaggggtaagggacaacagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 23803  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       |   |||||| |||||||| || | |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| || |||   |     
T  23804 agatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatgtatgtggaag 23903  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  23904 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 23966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 9547 - 9785
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || || |||| ||| |||||||||||||| ||||||||||| |||||||| |||| |||||| || || ||||| | |||||| ||||| |    
T  9547 gaggaggatactaaggctctttacaaggtgatgagtgaacgaagaggtaaaggacagcagagtcatcctaaaccatatagtgctcttgctgataagggaa 9646  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
     ||| ||  | ||||||||||||||||| || | |||||||||||||||||| || ||||| |  |||||||| ||||| |||||||||||||| || ||    
T  9647 agcaaaggatgaatgatgagaggaggccaaacaggagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctg 9746  T
Q  212 taccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    |   |||||||||||||||||||||||||||||||||||    
T  9747 tgataaggatgagaagaagtgcttcaggtgtggtcagaa 9785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 23711 - 23913
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| ||||| |||||||||||| |  ||| |||||  | || ||| || ||||| |||||||||||||| |||||||| |||||||    
T  23711 aggatttatgaggaggataccaaggctcattataagattgtgaatgagcagaaagctaaaggtcagcagagtcgtcctaagccatacagtgctcctgctg 23810  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||| |  |||||| |   |||||| ||| |||| || | || |||| ||| || |||||| || |||| ||  ||||| |||||||||||||||||    
T  23811 ataagggcaaacagagaatggttgatgataggtggcctaagaagaaagatactcatgttgagattgtctgttatacttgtggtgagaaaggccacaagag 23910  T
Q  203 taa 205  Q
    |||    
T  23911 taa 23913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 5570 - 5344
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||| || ||||||||||| || || ||||| |||||||| ||||| |  |||||  | |    
T  5570 aaagctcattacaaggtgatgagtgaacgaagaggtaaaggacaacagagtcgtcctaaaccatatagtgctcctgctgataagggaaaacagaggttga 5471  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatga 223  Q
    |||||||||||||||| |  | ||||||||||||||||||||| ||||| |  ||||| |||||||||||||||| |||||| || |||   || |||||    
T  5470 atgatgagaggaggcccacgaggagagatgctcctgctgagattgtttgctacaagtgcggcgagaaaggccacaggagtaatgtctgtgataaagatga 5371  T
Q  224 gaagaagtgcttcaggtgtggtcagaa 250  Q
    |||||||||||||||||||||| ||||    
T  5370 gaagaagtgcttcaggtgtggttagaa 5344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 984 - 722
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| ||||||||||| || | | |||    
T  984 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagtaga 885  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | | |||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   ||    
T  884 agttgattgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaa 785  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     ||||||| ||||||||||||||| |||||||||||||||   |||||||| || ||||||||    
T  784 agatgagaggaagtgcttcaggtgcggtcagaagggtcacaatttagctgaatgtaagcgtgg 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 8787 - 9034
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| || || ||||||||| | ||||| |||||||| ||||||||||| ||| |||| ||| ||| ||| || || ||||| ||||| |    
T  8787 aggatatatgaggaagatactaaagctcatgacaaggttatgagtgaacgaagaggtaaaggatagcagagttgtcataaaccatatagtgctcctgcag 8886  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||| | |||||| || ||||||||||||||||| || | |||||||||| ||||| |||| ||||| |  |||||||| |||||| ||||||||||    
T  8887 acaagggaaagcagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctaagattgtttgctacaagtgtggtgagaaaagccacaagag 8986  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaa 250  Q
    ||| || |||   |||||||||||||||||||||||||||||||||||    
T  8987 taatgtctgtgataaggatgagaagaagtgcttcaggtgtggtcagaa 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 514134 - 514369
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| || ||||| ||||||||||| || | | |||    
T  514134 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttaaagtgctcctgctgacaaaggaaagaaga 514233  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||||||| ||||||||||||||||| || ||||||   ||    
T  514234 agatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaa 514333  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
     || |||| |||||||||||||||||||||||||||    
T  514334 agacgagaggaagtgcttcaggtgtggtcagaaggg 514369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 12178 - 12455
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || |||||||| || |||| |||||| |||||||||||||| || ||||| |||||| |||| |||||||| |||||||||||||| |||||    
T  12178 gtaggatttatgaggaggatacgaaagatcattacaaggtgatgagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgc 12277  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgag-atagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    ||||||||||| ||||||||| ||||||||||| ||||| || | ||||||||     | | || | || ||| || |||||||||||||||||||||||    
T  12278 tgacaagggtaagcagagactgaatgatgagagtaggcccaagaggagagatg---agggtaagtagagattgcttcaagtgtggcgagaaaggccacaa 12374  T
Q  200 gagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |||||| |||| |   || ||||||||||||||||| ||||||| |||||| || |||   |||| |||||| ||||||||    
T  12375 gagtaatgtttttcgtaaagatgagaagaagtgctttaggtgtgctcagaaaggacacacattagatgattgtaagcgtgg 12455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 20358 - 20635
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || |||||||| || |||| |||||| |||||||||||||| || ||||| |||||| |||| |||||||| |||||||||||||| |||||    
T  20358 gtaggatttatgaggaggatacgaaagatcattacaaggtgatgagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgc 20457  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgag-atagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    ||||||||||| ||||||||| ||||||||||| ||||| || | ||||||||     | | || | || ||| || |||||||||||||||||||||||    
T  20458 tgacaagggtaagcagagactgaatgatgagagtaggcccaagaggagagatg---agggtaagtagagattgcttcaagtgtggcgagaaaggccacaa 20554  T
Q  200 gagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    |||||| |||| |   || ||||||||||||||||| ||||||| |||||| || |||   |||| |||||| ||||||||    
T  20555 gagtaatgtttttcgtaaagatgagaagaagtgctttaggtgtgctcagaaaggacacacattagatgattgtaagcgtgg 20635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 2259 - 1981
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || ||||| || |||||||||||||| |||||||||||||| |||||||||||| || | |||||||| || ||||  |||||  ||||    
T  2259 gtagaatctatgaagaggatacaaaagctcattataaagtgatgagtgagcgcagaggtaagggatagtagagtcgtccgaaaccgtt-agtgcttctgc 2161  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 200  Q
    |||||| ||||  ||||| || ||||||||||||||||| || | | ||||||||||| |||| ||  |||| || |||||||| |||||||||||||||    
T  2160 tgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggtgagatgctcctactgaaattatttgcttcaagtgtggtgagaaaggccacaag 2061  T
Q  201 agtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
    ||||| || ||| ||| | ||||||||||||||||| |||||||| ||||| || ||    ||||||||||| ||||||||    
T  2060 agtaatgtgtgtgaccga-gatgagaagaagtgctttaggtgtggacagaaaggacatactttagctgattgtaagcgtgg 1981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 253
Target Start/End: Complemental strand, 11515 - 11265
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||| | ||||||||| | || |||||||| ||||| | |||||||||||| || ||||| |||||||    
T  11515 aggatttatgaggaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggtcagcagattcgtcctaagccttatagtgctcctgctg 11416  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || | |||||   | |||||||| ||||| || || | ||||||||||||| ||||||| |||||||  |||||||| || ||||||||||||||    
T  11415 acaaaggaaagcagattttgaatgatgataggagtcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagag 11316  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
     || | ||||   |  ||||||| |||||||||||||||||||||||||||    
T  11315 caatgcttgtggtagagatgagaggaagtgcttcaggtgtggtcagaaggg 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 284
Target Start/End: Original strand, 764 - 901
Alignment:
Q  147 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtc 246  Q
    |||||||||||||||||||| |||||||  ||||||||| |||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||    
T  764 agagatgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtc 863  T
Q  247 agaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    |||| || |||    |||||||||||||||||||||||    
T  864 agaaaggacacactctagctgattgcaagcgtggtgat 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 3820 - 3920
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| |||||  | || |||||||| |||||||| |||||||| ||||| ||||||||||    
T  3820 atctatgaggaggacacgaaagctcattacaaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgaca 3919  T
Q  106 a 106  Q
    |    
T  3920 a 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 286
Target Start/End: Original strand, 43197 - 43468
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| ||||||  |||||| ||||||||||||||||| |||||||||||||| || |||||||| || | ||| ||||| ||| || |||| ||||  |    
T  43197 gaggataccaaatgtcattacaaggtgatgagtgagcgcagaggtaagggacaacagagtcgtccaaaactgtatagtgctccttctaacaaaggtaaac 43296  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-a 213  Q
    |||| || ||||||||||||||||| || | |||||||||||||  |||||| || ||||| |||||| | || || |||||||||||||| || ||| |    
T  43297 agaggctgaatgatgagaggaggcctaagaggagagatgctcctaatgagattgtctgtttcaagtgtcgtgaaaagggccacaagagtaatgtgtgtga 43396  T
Q  214 ccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
     | | ||||||||||||||||| |||||||| ||||| || |||   ||||||||||| |||||||| |||||    
T  43397 tcga-gatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatgt 43468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 1070 - 1305
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| ||||| || ||||||||||||||||| ||| | ||||||||| | || || ||||||||| | | |||||||||||| |||||||| |||||||    
T  1070 aggatttacgaagaagacaccaaagctcattacaagataatgagtgagaggaggggaaagggacagaagaatcgtcctaagccttacagtgctcctgctg 1169  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || | |||||   | |||||||| ||||| || || | ||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||    
T  1170 acaaaggaaagcagaagatgaatgatgataggagacccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaaggccacaagag 1269  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcag 238  Q
     || ||||||   |  ||||||| ||||||||||||    
T  1270 caatgtttgtggtagagatgagaggaagtgcttcag 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 6128 - 5857
Alignment:
Q  15 gaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggc 114  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| || ||||| ||||| ||||||||||| || |  |    
T  6128 gaggatacgaaagctcattataaagtgatgagtgagcgcagaggtaagggtcagcagagtcgtccgaaaccgtatagtgctcctgctgacaaaggaaaac 6029  T
Q  115 agagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
    |||  || ||||||||||||||||| |  | ||||||||| |||  |||||  || | ||| |||||||| |||||||||||||||||||| || |||      
T  6028 agatgctgaatgatgagaggaggcctaggaggagagatgcccctaatgagactgtctatttcaagtgtggtgagaaaggccacaagagtaatgtgtgtga 5929  T
Q  215 caaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
        ||| |||||||||| ||||| ||||| ||||| || |||   |||||||||||||||||||| |||||    
T  5928 ttgagataagaagaagtgtttcagatgtggacagaaaggacacacattagctgattgcaagcgtggggatgt 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 277
Target Start/End: Complemental strand, 3118 - 2895
Alignment:
Q  54 agaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatg 153  Q
    ||||||||  ||||||| |||| |||||| ||||| ||||| ||||||||||| || |  |||||  | ||||||||||||||||| || | ||||||||    
T  3118 agaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatg 3019  T
Q  154 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
    |||||| |||||| ||||| |  ||||||||  ||||||||||||||||||| ||||||   || ||||||||||||| |||||||||||| ||||||||    
T  3018 ctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagttcttcaggtgtggacagaaggg 2919  T
Q  254 tcacttgttagctgattgcaagcg 277  Q
     |||   ||||||||||| |||||    
T  2918 acacacattagctgattgtaagcg 2895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 95 - 276
Target Start/End: Original strand, 63377 - 63558
Alignment:
Q  95 ccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggc 194  Q
    ||||||||||||||||| ||| ||| | ||||||||||||||||| || | ||||||||||||| |||| || |||||||| |||||||| || ||||||    
T  63377 ccctgctgacaagggtaagcaaagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggc 63476  T
Q  195 cacaagagtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagc 276  Q
    ||||||||||| |||||| ||| | |||||||||||||| ||||||||||||||||| || |||   ||||||||||| ||||    
T  63477 cacaagagtaatgtttgtgaccga-gatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagctgattgtaagc 63558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 63303 - 63372
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagca 70  Q
    ||||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| |||| ||||||    
T  63303 gtaggatttatgaagaggatacgaaagctcattacaaggtgatgagtgagcgtagaggcaaggtacagca 63372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 584 - 846
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcaga 117  Q
    |||||||||| | |||| ||| | |||||| || | || |||||||||||||| | |||||||||||| |||||||| |||  |||||| || | |||||    
T  584 gacaccaaagtttattacaagataatgagttagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctattgacaaaggaaagcaga 683  T
Q  118 gacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaa 217  Q
       | |||||||| |||||||| || | ||||||||||||| ||||||| |||||||  |||| ||| ||||||||||||||||| || ||||||   ||    
T  684 agatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtttggtgagaaaggccacaagagcaatgtttgtggtaa 783  T
Q  218 ggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtgg 280  Q
     || |||| ||||||||||||||||||||| ||||| |||   |||||||| || ||||||||    
T  784 agacgagaggaagtgcttcaggtgtggtcaaaagggacacagtttagctgaatgtaagcgtgg 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 16375 - 16577
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||||| || |||||||||||||| ||||| ||||||||||| || |||||| | ||||| |||||||| ||||| || ||||| |||||||    
T  16375 aggatctatgaggaagataccaaagctcattacaaggttatgagtgagcggaggggtaagagtcagcagagtcgtccaaagccttatagtgctcctgctg 16474  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | || |||| ||| ||  | ||||||||||||||||| |  | || |||| ||||||||||| | ||||| |  |||||||| ||||| |||||||||||    
T  16475 ataaaggtaagcaaagggtgaatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagggccacaagag 16574  T
Q  203 taa 205  Q
    |||    
T  16575 taa 16577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 253
Target Start/End: Original strand, 66874 - 67124
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||| | ||||||||| | || || ||||||||||| | |||||||||||| |||||||| |||| ||    
T  66874 aggatttatgaggaagacaccaaagctcattacaagataatgagtgagaggaggggcaagggacagcagaatcgtcctaagccttacagtgctcctgttg 66973  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || | | |||   | |||||||| ||||| || || | ||||||||||||| | ||||| ||||||| ||||||||| || ||||||||||||||    
T  66974 acaaaggaaagtagatgatgaatgatgataggagacccaagaggagagatgctccttccgagattgtttgttataagtgtggtgaaaaaggccacaagag 67073  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaaggg 253  Q
     || ||||||   |   |||||| ||| || |||||||||||||| |||||    
T  67074 caatgtttgtggtagacatgagaggaaatgtttcaggtgtggtcaaaaggg 67124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 625 - 775
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    ||||||| || || ||||| || ||||||||  ||||||||||||||||| | ||||||||||||||||| |||||||| || ||||||||||| |||||    
T  625 gtaggatttatgaagaggatacaaaagctcac-ataaggtgatgagtgagtgtagaggtaagggacagcagagtcgtccgaaaccgtacagtgctcctgc 723  T
Q  101 tgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagat 152  Q
    |||||| ||||   ||||||| ||||||||||||||||| || | |||||||    
T  724 tgacaaaggtaaatagagactgaatgatgagaggaggcctaagaggagagat 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 30092 - 30291
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||||||||| |||||||||||  || | ||||||||| | || ||||||||| | || | ||||||||| || |||||||| |||||||    
T  30092 aggatatatgaggaggacacaaaagctcattactagataatgagtgagaggaggggtaagggataacagaatcgtcctaaaccttacagtgctcctgctg 30191  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| || |  ||||   | |||||||| |||||||| || | || |||||||||||||||||| ||||||| ||||||||| || ||||||||||||||    
T  30192 acaaagggaaacagaagatgaatgatgacaggaggcccaagaggaaagatgctcctgctgagattgtttgttataagtgtggtgaaaaaggccacaagag 30291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 3661 - 3939
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggta-ag-ggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||| |||||||| |||||||| ||||||||||| |||||||||  |||||| | || || |||||| ||||||||||||| || ||||| ||||||||    
T  3661 atctatgaggaggataccaaagcacattataaggttatgagtgag--aagaggaacagaggccagcaaggtcgtcctaagccctatagtgctcctgctga 3758  T
Q  104 caagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagt 203  Q
    |||||| |  || ||| | |||||||||||||| || || | |||||||| | ||| |||||| ||||| |  |||||||||||||  ||||||||||||    
T  3759 caaggggaaacaaagattgaatgatgagaggagacctaagaggagagatgtttctgttgagattgtttgctacaagtgtggcgagaggggccacaagagt 3858  T
Q  204 aacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    || || || |     || ||||||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||||||    
T  3859 aatgtctgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatgcgatagctgaatgcaagcgtggtgat 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 7696 - 7754
Alignment:
Q  154 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||| || || |||||||| || ||||||| |||||||||||||||||| ||||||    
T  7696 ctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 7754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 37038 - 36755
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    |||| ||||| ||||||||||||||||||||||| |||||  | | |||||| ||||  |||||| ||||| ||||  |||||||| || ||||||||||    
T  37038 gtagaatctatgaggaggacaccaaagctcattacaaggttgtaaatgagcggaagac-taagggccagcagagtctccctaagccctatagtgcccctg 36940  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| || ||||| || ||||| ||||||||||||||    
T  36939 ctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagatcgtctgtttcaattgtggtgagaaaggccacaa 36840  T
Q  200 gagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    ||| || |||||| |  |||| | |||||| || ||| |||||||  ||||||||||   ||||||||||||||||||| |||||    
T  36839 gagcaatgtttgtccagaggaggtgaagaaatgtttccggtgtggcaagaagggtcatacgttagctgattgcaagcgtagtgat 36755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 57404 - 57582
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||||| | ||| || || |||||||||||||| ||||| |||||||| |||||||| ||||||| ||| ||| | ||||    
T  57404 gctcattacaaggttgtgaatgagcggaaaggcaaaggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatg 57503  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||||| |  | || ||||||||||| |||||| ||||  | ||  ||||||||||||||||| ||||||||    
T  57504 atgagaggaggcctagaaagaaagatgctcctgttgagattgtttactatacttgtggcgagaaaggccataagagtaa 57582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 252157 - 251961
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||||||| | || ||||||||||| || | ||||||||| || |||||||| |||||||    
T  252157 aggatatatgaggaagacaccaaagctcattacaaggtgatgagtgagaggaggggtaagggacaacataatcgtcctaaaccttacagtgctcctgctg 252058  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
     ||  || |  || |   | |||||||| |||||||| || | ||||||||||| || |||||| || ||||| |||||||| || |||||||||||    
T  252057 ccacaggaaaacataagatgaatgatgataggaggcccaagaggagagatgctcttgttgagattgtgtgtttcaagtgtggtgaaaaaggccacaa 251961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 229681 - 229827
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| ||||| |||||||| || |||||||||||||| ||||| |  |||||| |    ||||| ||| |||| |||| ||  ||||||||||| ||||    
T  229681 cagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaataagaaggatgctcctgcggaga 229780  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | |||||||| || ||||| ||||||||||||||||| || ||||||    
T  229781 ttgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 229827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 7387 - 7209
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||||| | ||| ||| | ||||||||||| || ||||| |||||||| |||||||| ||||||| ||| ||| | ||||    
T  7387 gctcattacaaggttgtgaatgagcggaaaggcaagagtcagcaaagtcgaccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatg 7288  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||||| |  | || ||||||||||| |||||| ||||| | ||  ||||| ||||||||||| ||||||||    
T  7287 atgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctatacttgtggtgagaaaggccataagagtaa 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 14517 - 14339
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||||| | ||| ||| | ||||||||||| || ||||| |||||||| |||||||| ||||||| ||| ||| | ||||    
T  14517 gctcattacaaggttgtgaatgagcggaaaggcaagagtcagcaaagtcgaccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatg 14418  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||||| |  | || ||||||||||| |||||| ||||| | ||  ||||| ||||||||||| ||||||||    
T  14417 atgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctatacttgtggtgagaaaggccataagagtaa 14339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 18365 - 18181
Alignment:
Q  21 accaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagac 120  Q
    |||||||||||||| ||||   ||| |||| | | |||||| || ||| |||||||||| ||||| |||| ||| |||||||| ||||||| ||| |||     
T  18365 accaaagctcattacaaggctgtgaatgagaggaaaggtaaaggtcagaaaagtcgtccaaagccttacaatgctcctgctgataagggtaagcaaagag 18266  T
Q  121 ttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||||||||||| |  | || ||||||| |||||||||| ||||| |  |  ||||| ||||||||||| ||||||||    
T  18265 ttaatgatgagaggaggccaagaaagaaagatgctactgctgagattgtttgctacacttgtggtgagaaaggccataagagtaa 18181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 110673 - 110875
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| ||||| |||||||| ||| |  ||| |||||| | ||  || || ||||| || |||||||||||  ||||||| ||||| |    
T  110673 aggatttatgaggaggataccaaggctcattacaagattgtgaatgagcggaaagtcaaaggtcagcagagccgtcctaagcctcacagtgctcctgccg 110772  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||| | ||||||| |   |||||||||| | || |  | || ||||||||||| |||||| || || | ||  ||||| |||||||||||||||||    
T  110773 ataaggggaagcagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagag 110872  T
Q  203 taa 205  Q
    |||    
T  110873 taa 110875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 12161 - 12058
Alignment:
Q  177 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagc 276  Q
    |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||||||||||||||||||||||||||||   |||||||| |||||||    
T  12161 aagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagc 12062  T
Q  277 gtgg 280  Q
    ||||    
T  12061 gtgg 12058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 2537 - 2326
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || ||||| || |||||||||||||||||| | |||| |||||| || ||||||    || | |||||||||||||| |||||||| || ||||    
T  2537 aggatttatgaggaagagaccaaagctcattataagatcatgaatgagcggaggggtaagaactagtagagtcgtcctaagccttacagtgctccggctg 2438  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||||| ||||||  | |||||||||||||| || || | || ||||   |||||||||||  |||||||    ||||| |||||||| ||||||||    
T  2437 ataagggtaagcagagggtgaatgatgagaggagacccaagaagaaagatatacctgctgagattctttgtttcctatgtggagagaaaggtcacaagag 2338  T
Q  203 taacgtttgtac 214  Q
    ||||| ||||||    
T  2337 taacgcttgtac 2326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13818 - 13923
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgc 100  Q
    |||| ||||| || || ||||||||||||||||| ||| | ||||||||| | || |||||||||||||| | |||||||||||| |||||||| |||||    
T  13818 gtagaatctatgaagaagacaccaaagctcattaaaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgc 13917  T
Q  101 tgacaa 106  Q
    ||||||    
T  13918 tgacaa 13923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 328 - 117
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagc-gaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    |||| ||||| ||||||||||||||||||||||| |||||  ||| ||||| |||||  |||||| | ||| ||||| |||||||| || ||||||||||    
T  328 gtagaatctatgaggaggacaccaaagctcattacaaggttgtgaatgagcggaaga-ctaagggccggcagagtcgccctaagccctatagtgcccctg 230  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| || ||||| || ||||| ||||||||||||||    
T  229 ctgataagggaaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaattgtggtgagaaaggccacaa 130  T
Q  200 gagtaacgtttgt 212  Q
    ||| || ||||||    
T  129 gagcaatgtttgt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 17762 - 17686
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgc 94  Q
    ||||||||||||||||||||| | ||||||||| | || |||||||||||||| |||||||||||||| ||||||||    
T  17762 gacaccaaagctcattataagataatgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacagtgc 17686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 13798 - 14007
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    |||||||||||||||||||||| ||||||||| |||||  | | |||||| ||||  |||||| || || ||||| |||||||| || |||||||||| |    
T  13798 aggatctacgaggaggacaccagagctcattacaaggttgttaatgagcggaagac-taagggccaacagagtcgccctaagccctatagtgcccctgat 13896  T
Q  102 gacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaaga 201  Q
    || ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||| ||||| || |||||||| ||||| ||||||||||||||||    
T  13897 gataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaaga 13996  T
Q  202 gtaacgtttgt 212  Q
    | || ||||||    
T  13997 gcaatgtttgt 14007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 26869 - 26679
Alignment:
Q  24 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagactta 123  Q
    ||||||||||| |||||  ||  |||| ||| ||||||| | ||| ||| |||||| ||||| |||||||| |||||||  ||||||| ||| ||| | |    
T  26869 aaagctcattacaaggttgtgcatgagagaaaaggtaagagtcagtaaattcgtccaaagccttacagtgctcctgctggtaagggtaagcaaagagtga 26770  T
Q  124 atgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
    |||||||||||||||| |  | || |||| || |||||||| | ||||| | ||  ||||| |||||||||||||||||||| | ||||||    
T  26769 atgatgagaggaggcctagaaagaaagatactactgctgaggttgtttgctatacttgtggtgagaaaggccacaagagtaatgcttgtac 26679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 36733 - 36785
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||| |||||    
T  36733 gatgctcctgctgagattgtctgttttaattgtggcgagaaaggccataagag 36785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 152 - 20
Alignment:
Q  6 atctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgaca 105  Q
    ||||| ||||| || |||||||||||||| |||||  ||| |||| | | ||| ||||  |||||||||||||| ||||| |||||||| |||||||| |    
T  152 atctatgaggaagataccaaagctcattacaaggttgtgaatgagaggaaaggcaaggt-cagcaaagtcgtccaaagccttacagtgctcctgctgata 54  T
Q  106 agggtaggcagagacttaatgatgagaggaggcc 139  Q
    |||||| ||| ||| | |||||||||||||||||    
T  53 agggtaagcaaagattgaatgatgagaggaggcc 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 600 - 468
Alignment:
Q  7 tctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    |||| |||||||| || ||||||||||| ||||   |||||||| | | ||||||||| ||||||||||| || ||||| ||||| || |||||||| ||    
T  600 tctatgaggaggatactaaagctcattacaaggctgtgagtgagaggaaaggtaagggtcagcaaagtcgcccaaagccttacagcgctcctgctgataa 501  T
Q  107 gggtaggcagagacttaatgatgagaggaggcc 139  Q
    |||||  || ||| | |||||||||||||||||    
T  500 gggtaaacaaagagtgaatgatgagaggaggcc 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 30433 - 30345
Alignment:
Q  18 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||||||||||||| |||   ||||||||| | || || ||||||||||| |||||||||||||| |||||||| |||||||||||    
T  30433 gacaccaaagctcattacaagacaatgagtgagaggaggggcaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaa 30345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 30331 - 30225
Alignment:
Q  144 atgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtg 243  Q
    ||||| ||||||| | || |||| |||||||  |||||||| |||||||||||||| || |||||||||   |  ||||||| |||||| ||||||||||    
T  30331 atgagtgatgctctttctaagattgtttgttacaagtgtggtgagaaaggccacaaaagcaacgtttgtggtagagatgagaggaagtgattcaggtgtg 30232  T
Q  244 gtcagaa 250  Q
    |||||||    
T  30231 gtcagaa 30225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 8086 - 7908
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| || || |||||||||||||| | ||||||||| ||    ||||| |||||| ||||||| ||||| |||||||| |||| |||||| ||      
T  8086 gaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgttgacaaaggag 7987  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaa 190  Q
     ||||||| | |||||||||||||| || || |  || |||| |||| ||||||| |||||||  |||||||| |||||    
T  7986 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaa 7908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 284
Target Start/End: Complemental strand, 1367 - 1196
Alignment:
Q  113 gcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||| | |||||||||||||| || || |  || |||| |||| ||||||| |||||||  |||||||| ||||| |||||||||||||| |||||     
T  1367 gcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttgc 1268  T
Q  213 accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgat 284  Q
    |     || ||||||||||||||| | |||||  ||||||| ||   | ||||||| |||||||||||||||    
T  1267 aatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggtgat 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 4982 - 5107
Alignment:
Q  74 tcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgt 173  Q
    ||||||||| || |||||||| ||||||||||| || | ||||||  | |||||||| |||||||| || | |||||||||||||||||| || ||||||    
T  4982 tcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgt 5081  T
Q  174 tttaagtgtggcgagaaaggccacaa 199  Q
    |  ||| |||  || |||||||||||    
T  5082 taaaagagtgatgaaaaaggccacaa 5107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 48259 - 48066
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| |||||  ||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||||||||| |||||||| |||||||| |||||||    
T  48259 gaggaggataccaagactcattacaagattgtgaatgagcgaaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggta 48160  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
      |||||| |   |||||||||| | || |  | || ||||||||||| |||||| || || | ||  ||||| ||||||||||||||||||||    
T  48159 aacagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaa 48066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 55246 - 55439
Alignment:
Q  12 gaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||||||| |||||  ||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||||||| | |||||||| |||||||| |||||||    
T  55246 gaggaggataccaagactcattacaagattgtgaatgagcgaaaagacaaaggtcagcagagtcgtcctaagacttacagtgctcctgctgataagggta 55345  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
      |||||| |   |||||||||| | || |  | || ||||||||||| |||||| || || | ||  ||||| ||||||||||||||||||||    
T  55346 aacagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaa 55439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 276 - 1
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||| || ||||| ||||||||||||||| | |||||  ||| |||||| ||||  |||||| ||||| ||||| |||||||| || ||||||||||    
T  276 gtaggatttatgaggaagacaccaaagctcatcacaaggttgtgaatgagcggaagac-taagggccagcagagtcgccctaagccctatagtgcccctg 178  T
Q  100 ctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaa 199  Q
    |||| ||||| |   ||||  ||   ||||| ||| |||| || | ||  ||||||| ||| ||||| || ||||| |  ||||| ||||||||||||||    
T  177 ctgataagggcaaatagagtattgtcgatgataggcggcctaagaagaaggatgctcttgcggagattgtctgtttcatttgtggtgagaaaggccacaa 78  T
Q  200 gagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagc 276  Q
     || || |||||| | ||||| | |||||| || ||| |||||||  ||||||||||    ||||||||||||||||    
T  77 aagcaatgtttgtccaaaggaggtgaagaaatgtttccggtgtggcaagaagggtcatactttagctgattgcaagc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 32270 - 32218
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    ||||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  32270 gatgctcctgctgagattgtctgttttaattgtggcgagaaaggccacaagag 32218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 212
Target Start/End: Original strand, 10062 - 10214
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| ||||| || || ||||||| |||||| ||||| | ||||||| |    ||||| ||| |||| || | ||  ||||||||||    
T  10062 aagggtcagcagagtcgccctaaaccttatagtgcccttgctgataagggcaagcagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 10161  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | || || |||||||| || | ||||| |||||||||||||||||| ||||||    
T  10162 cggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgt 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 212
Target Start/End: Original strand, 12717 - 12869
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| ||||| || || ||||||| |||||| ||||| | ||||||| |    ||||| ||| |||| || | ||  ||||||||||    
T  12717 aagggtcagcagagtcgccctaaaccttatagtgcccttgctgataagggcaagcagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 12816  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | || || |||||||| || | ||||| |||||||||||||||||| ||||||    
T  12817 cggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgt 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 1693 - 1832
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||| ||||| |||||||| |||||||| ||||| |  || ||| ||||||||||||||||||| |  | || ||||||||||  |||||    
T  1693 cagcagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctaatgaga 1792  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || || | |   ||||||||||||||||| ||||||||    
T  1793 ttgtgtgctatgcttgtggcgagaaaggccataagagtaa 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 10846 - 10803
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  10846 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 4557 - 4696
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||| ||||| |||||||| |||||||| ||||| |  || ||| ||||||||||||||||||| |  | || ||||||||||  |||||    
T  4557 cagcagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctaatgaga 4656  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || || | |   ||||||||||||||||| ||||||||    
T  4657 ttgtgtgctatgcttgtggcgagaaaggccataagagtaa 4696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 23127 - 23266
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||||| |||||||||||| |||||||| |||||||| |||||||  |||||| | ||||||||||| ||||| |  | || |||  || ||||||||     
T  23127 cagcaaaatcgtcctaagccttacagtgctcctgctgataagggtaaacagagattgaatgatgagagaaggcctagaaagaaagagactactgctgagg 23226  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | ||||||| ||  | ||| ||||||||||| ||||||||    
T  23227 ttgtttgttatacttttggtgagaaaggccataagagtaa 23266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 9192 - 9328
Alignment:
Q  78 cctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgtttta 177  Q
    |||||||| || ||||| |||||||| |||||||  || ||| | ||||||||||||||||| |  | || |||| || || ||||||| ||||| | ||    
T  9192 cctaagccttatagtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcctagaaagaaagatactactactgagattgtttgctata 9291  T
Q  178 agtgtggcgagaaaggccacaagagtaacgtttgtac 214  Q
      ||||| ||||| |||||||||||||| | ||||||    
T  9292 cttgtggtgagaagggccacaagagtaatgcttgtac 9328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 104701 - 104562
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||| ||||| || ||||| |||||||| ||||| |  |||||| | | |||||||||| |||| |  | || ||||||||||| |||||    
T  104701 cagcagagtcgtccaaagccttatagtgctcctgctgataagggaaaacagagaatgattgatgagaggcggcctagaaagaaagatgctcctgttgaga 104602  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | ||||| | ||  ||||| ||||||||||||||||||||    
T  104601 ttgtttgctatacttgtggtgagaaaggccacaagagtaa 104562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 216210 - 216388
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||| | | ||| ||||| |||||||||||||| ||||| |||||||| |||||||| ||||||| ||| ||| | ||||    
T  216210 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagattgaatg 216309  T
Q  127 atgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    || | |||||||| |  | || ||||| |  ||||||||| ||||| |  |  ||||| ||||||||||| ||||||||    
T  216310 ataaaaggaggcctagaaagaaagatgatgttgctgagattgtttgctacacttgtggtgagaaaggccataagagtaa 216388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 19187 - 18935
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| |||||  ||||||| ||| |  ||| |||||||| || ||| || | |||||||||||||||||| |||||||| |||||||    
T  19187 aggatttatgaggaggataccaagactcattacaagattgtgaatgagcgaaaagctaaaggtc-gcaaagtcgtcctaagccttacagtgctcctgctg 19089  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | |||||||  |||||| |   |||||| ||| | || || | || ||| ||||||| ||| || || || | ||  ||||| |||||||||||||||||    
T  19088 ataagggtaaacagagaatggttgatgataggcgccccaaaaagaaagaagctcctgttgaaattgtctgctatacttgtggtgagaaaggccacaagag 18989  T
Q  203 taacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtca 256  Q
    ||| | |||| ||  ||||| ||||| ||| ||  | |||||| ||||||||||    
T  18988 taatgcttgtcccggggatgtgaagaggtgttttcgctgtggtaagaagggtca 18935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 28862 - 28975
Alignment:
Q  171 tgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgatt 270  Q
    ||||| || ||||||||||||||||||||||| || |||||| | ||||| |  ||||| || ||| |||||||  |||||||||||   |||||||| |    
T  28862 tgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctaaggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgaat 28961  T
Q  271 gcaagcgtggtgat 284  Q
    |||||| |||||||    
T  28962 gcaagcatggtgat 28975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 17642 - 17489
Alignment:
Q  59 taagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcct 158  Q
    |||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |  || ||| |    ||||| ||| |||| || | ||  |||||||||    
T  17642 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacatagaatggtcgatgataggcggcctaagaagaaggatgctcct 17543  T
Q  159 gctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    || ||||| || ||||| || ||||| |||||||||||||||||||| ||||||    
T  17542 gcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgt 17489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 3902 - 3859
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  3902 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 5479 - 5327
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctg 159  Q
    ||||| ||||| ||||| |||||||| || ||||||| |||||| ||||| |  |||||| |    ||||| ||| |||| || | ||  ||||||||||    
T  5479 aagggccagcagagtcgccctaagccttatagtgcccttgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctg 5380  T
Q  160 ctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    | ||||| |||||||| || ||||||||||| ||||| |||||||| ||||||    
T  5379 cggagattgtttgtttcaactgtggcgagaagggccataagagtaatgtttgt 5327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 431 - 379
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||| |||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  431 gatgttcctgctgagattgtttgttttaattgtggtgagaaaggccacaagag 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 14817 - 15016
Alignment:
Q  13 aggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    ||||||| ||||| |||||||| |||||  ||| |||||| ||||  |||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |    
T  14817 aggaggataccaaggctcattacaaggttgtgaatgagcggaagac-taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggca 14915  T
Q  112 ggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 211  Q
      |||||| |    ||||| |||  ||| || | ||  ||||||||| | ||||| || |||||||| ||||| ||||||||||||||||| || |||||    
T  14916 aacagagaatggtcgatgataggcagcctaagaagaaggatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttg 15015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 11269 - 11331
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||| | ||||| || |||||||| ||||| ||||||||||||||||| || ||||||    
T  11269 gatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 11331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 504 - 453
Alignment:
Q  151 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    |||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  504 atgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagag 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 799 - 850
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg 52  Q
    ||||||| || ||||| || ||||||||||||||||||||||||||||||||    
T  799 gtaggatttatgaggatgataccaaagctcattataaggtgatgagtgagcg 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 13081 - 12982
Alignment:
Q  187 agaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagcgtggtgatgt 286  Q
    ||||||||||||||||||| || |||  |   || |||||||||||||| |||||||||||||| || |||   ||||||||||| |||||||| |||||    
T  13081 agaaaggccacaagagtaatgtatgtgaccgtgacgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgt 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 19936 - 19830
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| |||||  ||||||| ||| |  ||| |||||| | || |||||| ||||| ||||| |||||||| || |||||||||||||    
T  19936 aggatctatgaggaggataccaagactcattacaagattgtgaatgagcggaaagctaagggtcagcagagtcgccctaagccttatagtgcccctgctg 19837  T
Q  103 acaaggg 109  Q
    | |||||    
T  19836 ataaggg 19830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 40273 - 40436
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| ||||||||||| |||||  ||||||| ||| |  ||| ||||||||  |  ||||| || || |||||||||||||| ||||||||||||||||    
T  40273 aggatttacgaggaggataccaagactcattacaagattgtgaatgagcgaaaggccaagggtcaacagagtcgtcctaagccttacagtgcccctgctg 40372  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagat 166  Q
    | ||||| |  |||||| |   |||||| ||| | ||||  | || ||||||||||||||||||    
T  40373 ataagggaaaacagagagtggttgatgataggcgcccgagaaagaaagatgctcctgctgagat 40436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26000 - 25949
Alignment:
Q  1 gtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg 52  Q
    ||||||| || ||||| || ||||||||||||||||||||||||||||||||    
T  26000 gtaggatttatgaggatgataccaaagctcattataaggtgatgagtgagcg 25949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 21995 - 21944
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaaga 201  Q
    ||||||||||||||||| || |||||||| ||||| ||||||||||||||||    
T  21995 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaaga 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 37419 - 37368
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaaga 201  Q
    ||||||||||||||||| || |||||||| ||||| ||||||||||||||||    
T  37419 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaaga 37368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 11930 - 11891
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  11930 aagggacagcagagtcgtcctaagccgtacagtgcccctg 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 21458 - 21419
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctg 99  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  21458 aagggacagcagagtcgtcctaagccgtacagtgcccctg 21419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 55479 - 55439
Alignment:
Q  63 ggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  55479 ggacaacagagtcgtcctaagccgtacagtgcccctgctga 55439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 393 - 455
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||| | ||||| |||||||| || ||||||||||||||||||||||| || ||||||    
T  393 gatgctcctacggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 555 - 353
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| ||||| |||||||||||| |  ||| |||||  | ||  || || ||||| |||||||||||||| |||||||| |||||||    
T  555 aggatatatgaggaggataccaaggctcattataagattgtgaatgagcagaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctg 456  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | |||||||  | |||| |   |||||| ||| |||| || | || |||||||| ||  ||||| || || | ||  ||||| |||||||||||||||||    
T  455 ataagggtaaaccgagaatggttgatgataggtggcctaagaagaaagatgctcttgtggagattgtctgctatacttgtggtgagaaaggccacaagag 356  T
Q  203 taa 205  Q
    |||    
T  355 taa 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 4972 - 4770
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| || |||||||| ||||| |||||||||||| |  ||| |||||  | ||  || || ||||| |||||||||||||| |||||||| |||||||    
T  4972 aggatatatgaggaggataccaaggctcattataagattgtgaatgagcagaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctg 4873  T
Q  103 acaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | |||||||  | |||| |   |||||| ||| |||| || | || |||||||| ||  ||||| || || | ||  ||||| |||||||||||||||||    
T  4872 ataagggtaaaccgagaatggttgatgataggtggcctaagaagaaagatgctcttgtggagattgtctgctatacttgtggtgagaaaggccacaagag 4773  T
Q  203 taa 205  Q
    |||    
T  4772 taa 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 270 - 208
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||||| || || |||||||| || ||||||| |||||||||||||||||| ||||||    
T  270 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 11542 - 11428
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||| | | ||| ||||| |||||||||||||| ||||| || |||||||||||||| ||||| |  ||  || ||||||    
T  11542 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtcccaagccttatagtgcccctgctgataagggcaaacaacgagttaatg 11443  T
Q  127 atgagaggaggccga 141  Q
    |||||||||| ||||    
T  11442 atgagaggagaccga 11428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 393 - 263
Alignment:
Q  72 agtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagttt 171  Q
    |||||||||||||||||||||||||||||||| ||||| |  |||||| |    || || ||  |||| || | ||  |||| |||||||||||| || |    
T  393 agtcgtcctaagccgtacagtgcccctgctgataagggcaaacagagaatggtcgaggatagacggcctaagaagaaggatgttcctgctgagattgtct 294  T
Q  172 gttttaagtgtggcgagaaaggccacaagag 202  Q
    | ||||| ||||| |||||||||||||||||    
T  293 gctttaattgtggtgagaaaggccacaagag 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 13037 - 13099
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 212  Q
    ||||||||||| || || |||||||| || ||||||| |||||||||||||||||| ||||||    
T  13037 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 22721 - 22679
Alignment:
Q  64 gacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  22721 gacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 22679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 7710 - 7668
Alignment:
Q  64 gacagcaaagtcgtcctaagccgtacagtgcccctgctgacaa 106  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  7710 gacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 1451 - 1318
Alignment:
Q  72 agtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagatagttt 171  Q
    ||||| |||||||| |||||||| |||||||| |||||||  |||||| |   |||||| ||| | ||||  | ||  || ||||||| |||||| ||||    
T  1451 agtcgccctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcgcccgagaaagatggaagctcctgttgagattgttt 1352  T
Q  172 gttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||| ||  ||||| ||||||||||||||||||||    
T  1351 gttatacttgtggtgagaaaggccacaagagtaa 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 14808 - 14881
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggcc 139  Q
    ||||||| |||||||||||| |||||||| |||||||| ||||||| | | ||| |||||||||| || |||||    
T  14808 cagcaaaatcgtcctaagccttacagtgctcctgctgataagggtaagaaaagatttaatgatgaaagaaggcc 14881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 7038 - 6938
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    ||||||||||||||||| || || |||||||| ||| |  ||| |||||| ||||  |||||| ||||| ||||| |||||||| |||||||||||||||    
T  7038 aggatctacgaggaggatactaaggctcattacaagattgtgaatgagcggaagac-taagggtcagcagagtcgccctaagccttacagtgcccctgct 6940  T
Q  102 ga 103  Q
    ||    
T  6939 ga 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 15883 - 15746
Alignment:
Q  68 gcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgagata 167  Q
    |||||||||||| ||||| |||||||| |||||||| ||||| |  || ||| |||||||||||||| |||| |  | || ||||| |  |||||||||     
T  15883 gcaaagtcgtccaaagccttacagtgctcctgctgataagggcaaacaaagagttaatgatgagaggcggcccagcaagaaagatgttgttgctgagatt 15784  T
Q  168 gtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||| |  |  ||||| ||||||||||| ||||||||    
T  15783 gtttgctacacttgtggtgagaaaggccataagagtaa 15746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 1629 - 1545
Alignment:
Q  192 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacttgttagctgattgcaagc 276  Q
    |||||||||||||| | ||| ||| | ||||||||||| || ||||| || |||||||| ||||| ||||| ||||| |||||||    
T  1629 ggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaatggtcatttgttggctgaatgcaagc 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 7486 - 7622
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| ||||| |||||||| ||||||||||||||||| ||||| |  |||||| |    || || ||| |||| || | ||  |||| |||||||||||    
T  7486 cagcagagtcgccctaagccttacagtgcccctgctgataagggcaaacagagaatggtcgaagataggcggcctaagaagaaggatgttcctgctgaga 7585  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagag 202  Q
    | || || ||||| ||||| |||||||||||||||||    
T  7586 ttgtctgctttaattgtggtgagaaaggccacaagag 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 42170 - 42062
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| || || |||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||||||||| ||||||||  ||||||    
T  42170 aggatctatgaggaggatactaaggctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtcctaagccttacagtgcttctgctg 42071  T
Q  103 acaagggta 111  Q
    | |||||||    
T  42070 ataagggta 42062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 75890 - 75782
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| || || |||||||| ||| |  ||| |||||||| ||  || || ||||| |||||||||||||| ||||||||  ||||||    
T  75890 aggatctatgaggaggatactaaggctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtcctaagccttacagtgcttctgctg 75791  T
Q  103 acaagggta 111  Q
    | |||||||    
T  75790 ataagggta 75782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 34537 - 34643
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcg-aagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgct 101  Q
    ||||| ||||||||||| ||||| |||||||| |||||  ||| |||||| ||||  |||||| ||||| ||||| |||||||| || || |||||||||    
T  34537 aggatttacgaggaggataccaaggctcattacaaggtcgtgaatgagcggaagac-taagggccagcagagtcgccctaagccttatagcgcccctgct 34635  T
Q  102 gacaaggg 109  Q
    || |||||    
T  34636 gataaggg 34643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 291 - 346
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||| ||||| || |||||||  ||||| ||||||||||||||||||||    
T  291 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaa 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 9356 - 9411
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||| ||||| || |||||||  ||||| ||||||||||||||||||||    
T  9356 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaa 9411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 13297 - 13376
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggcc 139  Q
    ||||| ||||||||| |||| ||| | | |||||| |||||||| ||||||| ||| ||| | |||||||||||||||||    
T  13297 aagggtcagcaaagttgtccaaagtcttgcagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcc 13376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 4384 - 4523
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctgaga 165  Q
    ||||| |||||||||||||| |||||||| |||||||| |||| ||  |||||| |   |||||| ||| |||| || | || |||||||||||  ||||    
T  4384 cagcagagtcgtcctaagccttacagtgctcctgctgataaggataaacagagaatggttgatgataggcggcctaagaagaaagatgctcctgtggaga 4483  T
Q  166 tagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    | || || | ||  ||||| || |||||||||||||||||    
T  4484 ttgtctgctatacttgtggtgaaaaaggccacaagagtaa 4523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 12421 - 12322
Alignment:
Q  64 gacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctga 163  Q
    ||||||| |||||||| ||  |||| ||||| ||||||||||| | ||  ||||| || |||||||||||||||||  | | ||||||||||||| ||||    
T  12421 gacagcagagtcgtccgaaatcgtatagtgctcctgctgacaaagataaacagaggctgaatgatgagaggaggccttagaggagagatgctcctactga 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 14475 - 14420
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||||||| ||||| || |||||||  ||||||||||||||||| ||||||||    
T  14475 gatgctcctgcagagattgtctgttttacttgtggcgagaaaggccataagagtaa 14420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 15492 - 15618
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    ||||||||||| |||||  | ||||| || ||||| ||||||||||||||||| ||  ||||| |  |||| |  |||||||| ||| |||||||  |||    
T  15492 gatgctcctgcggagatcatctgtttcaattgtggtgagaaaggccacaagagcaatttttgtccagaggaggcaaagaagtgtttccggtgtggcaaga 15591  T
Q  250 agggtcacttgttagctgattgcaagc 276  Q
    |||||||    ||||||||||||||||    
T  15592 agggtcatacattagctgattgcaagc 15618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 8949 - 8843
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| ||| |||| |||||  ||||||| ||| |  ||| |||||| | || |||||| || || ||||| |||||||| ||||||||||||||||    
T  8949 aggatctatgagaaggataccaagactcattacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttacagtgcccctgctg 8850  T
Q  103 acaaggg 109  Q
    | |||||    
T  8849 ataaggg 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 15449 - 15343
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    |||||||| |||||||| |||||  ||||||| ||| |  ||| |||||| | || |||||| || || ||||| |||||||| || |||||||||||||    
T  15449 aggatctatgaggaggataccaagactcattacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttatagtgcccctgctg 15350  T
Q  103 acaaggg 109  Q
    | |||||    
T  15349 ataaggg 15343  T

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Target: scaffold0324 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 2527 - 2421
Alignment:
Q  3 aggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctg 102  Q
    ||||| ||||||||||| |||||  ||||||| ||| |  ||| ||||||||  |  ||||| || || |||||||||||||| |||||||||| |||||    
T  2527 aggatttacgaggaggataccaagactcattacaagattgtgaatgagcgaaaggccaagggtcaacagagtcgtcctaagccttacagtgcccttgctg 2428  T
Q  103 acaaggg 109  Q
    | |||||    
T  2427 ataaggg 2421  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 30923 - 30981
Alignment:
Q  147 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 205  Q
    ||||||| |||||||||||| ||||| |  |||||||| ||||| ||||||||||||||    
T  30923 agagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaa 30981  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 4026 - 3929
Alignment:
Q  66 cagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatgatgagaggaggccgaatatgagagatgctcctgctga 163  Q
    ||||| |||||||||||| | |||||||| |||||||| |||||||  |||||| |   |||||| ||| |||| || | || |||||||||||||||    
T  4026 cagcagagtcgtcctaagtcttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcggcctaagaagaaagatgctcctgctga 3929  T

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Target: scaffold0259 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 8736 - 8699
Alignment:
Q  60 aagggacagcaaagtcgtcctaagccgtacagtgcccc 97  Q
    |||||||| || ||||||||||||||||||||||||||    
T  8736 aagggacatcagagtcgtcctaagccgtacagtgcccc 8699  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 30766 - 30725
Alignment:
Q  62 gggacagcaaagtcgtcctaagccgtacagtgcccctgctga 103  Q
    |||||| || |||| |||||||||||||||||||||||||||    
T  30766 gggacaacagagtcatcctaagccgtacagtgcccctgctga 30725  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 17807 - 17851
Alignment:
Q  67 agcaaagtcgtcctaagccgtacagtgcccctgctgacaagggta 111  Q
    |||| |||||||||||||| |||||||| |||||||| |||||||    
T  17807 agcagagtcgtcctaagccttacagtgctcctgctgataagggta 17851  T

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Target: scaffold0342 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 14055 - 14167
Alignment:
Q  27 gctcattataaggtgatgagtgagcgaagaggtaagggacagcaaagtcgtcctaagccgtacagtgcccctgctgacaagggtaggcagagacttaatg 126  Q
    |||||||| |||||  ||| |||| | | ||| ||||| |||||||||||||| ||||| |||||||| |||| ||| ||||| |  || ||| | ||||    
T  14055 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgatgataagggaaaacaaagaataaatg 14154  T
Q  127 atgagaggaggcc 139  Q
    |||||| ||||||    
T  14155 atgagaagaggcc 14167  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 274
Target Start/End: Complemental strand, 3255 - 3131
Alignment:
Q  150 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcaga 249  Q
    |||| ||||||||||||   || ||| || ||||| |||||||||||||||||||  | |||| |  |||| | | ||||||| ||| |||||||  |||    
T  3255 gatgttcctgctgagattacttctttcaattgtggtgagaaaggccacaagagtactgcttgtcctgaggaggtggagaagtgtttccggtgtggcaaga 3156  T
Q  250 agggtcacttgttagctgattgcaa 274  Q
    ||||||||   ||||||||||||||    
T  3155 agggtcacacattagctgattgcaa 3131  T

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