View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9010_low_20 (Length: 270)

Name: NF9010_low_20
Description: NF9010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9010_low_20
NF9010_low_20
[»] chr2 (18 HSPs)
chr2 (5-251)||(12577100-12577346)
chr2 (1-255)||(19716463-19716717)
chr2 (1-255)||(19721026-19721280)
chr2 (1-247)||(23097464-23097710)
chr2 (1-239)||(23274352-23274590)
chr2 (1-247)||(20848340-20848585)
chr2 (5-203)||(24704932-24705130)
chr2 (1-188)||(28350685-28350872)
chr2 (5-67)||(22462931-22462993)
chr2 (5-174)||(11351161-11351330)
chr2 (6-67)||(23205245-23205306)
chr2 (6-67)||(23676849-23676910)
chr2 (5-113)||(24657108-24657216)
chr2 (11-57)||(21320459-21320505)
chr2 (5-67)||(23116509-23116571)
chr2 (2-66)||(21901469-21901533)
chr2 (5-57)||(23028912-23028963)
chr2 (5-57)||(24678428-24678480)
[»] chr7 (27 HSPs)
chr7 (5-251)||(18050850-18051096)
chr7 (1-247)||(14283267-14283513)
chr7 (1-247)||(11385322-11385568)
chr7 (9-207)||(12712564-12712762)
chr7 (1-147)||(14144871-14145017)
chr7 (117-247)||(14140789-14140919)
chr7 (1-243)||(13676565-13676807)
chr7 (1-247)||(13965561-13965807)
chr7 (1-246)||(15099496-15099741)
chr7 (1-247)||(21755522-21755768)
chr7 (1-247)||(26091691-26091937)
chr7 (1-243)||(26115483-26115725)
chr7 (1-243)||(12798397-12798636)
chr7 (1-247)||(40924710-40924956)
chr7 (1-247)||(49155411-49155657)
chr7 (1-248)||(19150120-19150367)
chr7 (1-248)||(20749519-20749766)
chr7 (1-204)||(12459781-12459984)
chr7 (1-247)||(13024454-13024700)
chr7 (1-247)||(16947365-16947611)
chr7 (5-171)||(9591549-9591715)
chr7 (5-174)||(16726360-16726529)
chr7 (5-174)||(17703374-17703543)
chr7 (1-171)||(12203693-12203863)
chr7 (1-60)||(14261139-14261198)
chr7 (213-247)||(15343541-15343575)
chr7 (5-69)||(11984279-11984343)
[»] chr4 (19 HSPs)
chr4 (5-251)||(53750380-53750626)
chr4 (5-251)||(51603702-51603948)
chr4 (1-255)||(16150748-16151002)
chr4 (1-255)||(16154894-16155148)
chr4 (1-247)||(27903505-27903751)
chr4 (1-247)||(20893151-20893397)
chr4 (1-247)||(11204138-11204384)
chr4 (1-247)||(3261700-3261946)
chr4 (1-247)||(29450443-29450689)
chr4 (1-247)||(7357387-7357633)
chr4 (1-171)||(15073555-15073725)
chr4 (1-243)||(14993273-14993515)
chr4 (1-247)||(44658772-44659018)
chr4 (4-178)||(18259630-18259804)
chr4 (1-207)||(15266936-15267142)
chr4 (5-171)||(13513546-13513712)
chr4 (5-67)||(18224123-18224185)
chr4 (5-67)||(18604469-18604531)
chr4 (4-66)||(8708978-8709040)
[»] chr3 (40 HSPs)
chr3 (5-251)||(13944769-13945015)
chr3 (5-251)||(8744528-8744774)
chr3 (1-219)||(16384506-16384724)
chr3 (1-247)||(16831662-16831908)
chr3 (1-243)||(31941656-31941898)
chr3 (1-243)||(17189127-17189369)
chr3 (1-247)||(24190053-24190299)
chr3 (1-243)||(31692319-31692561)
chr3 (1-243)||(12357661-12357903)
chr3 (49-243)||(11949107-11949301)
chr3 (7-247)||(16326848-16327089)
chr3 (1-247)||(10408717-10408963)
chr3 (1-247)||(28757068-28757314)
chr3 (1-243)||(35982934-35983176)
chr3 (1-171)||(13317703-13317873)
chr3 (1-247)||(47126693-47126939)
chr3 (1-243)||(14290666-14290908)
chr3 (1-243)||(18131481-18131723)
chr3 (47-247)||(10417225-10417425)
chr3 (1-171)||(12857630-12857800)
chr3 (1-243)||(16825413-16825655)
chr3 (1-247)||(11958315-11958561)
chr3 (1-144)||(15008718-15008858)
chr3 (1-241)||(12181099-12181339)
chr3 (4-171)||(15230428-15230595)
chr3 (4-171)||(15236296-15236463)
chr3 (1-243)||(17494400-17494641)
chr3 (5-67)||(23079166-23079228)
chr3 (196-247)||(13317863-13317914)
chr3 (5-67)||(15065990-15066052)
chr3 (5-67)||(23414939-23415001)
chr3 (1-66)||(2037046-2037111)
chr3 (1-66)||(2040787-2040852)
chr3 (1-66)||(14039676-14039741)
chr3 (5-188)||(11861151-11861334)
chr3 (5-144)||(12501775-12501914)
chr3 (5-60)||(17497617-17497672)
chr3 (5-67)||(16695083-16695145)
chr3 (5-57)||(14873734-14873786)
chr3 (214-246)||(19727500-19727532)
[»] chr5 (22 HSPs)
chr5 (5-251)||(17266426-17266672)
chr5 (1-247)||(25851106-25851352)
chr5 (1-247)||(20345316-20345562)
chr5 (1-247)||(22505713-22505959)
chr5 (1-247)||(14884079-14884325)
chr5 (1-247)||(23077993-23078239)
chr5 (1-243)||(23563256-23563498)
chr5 (5-67)||(18782346-18782408)
chr5 (6-247)||(20824487-20824728)
chr5 (47-247)||(22464984-22465184)
chr5 (1-149)||(23669764-23669912)
chr5 (1-67)||(21870366-21870432)
chr5 (1-67)||(21874646-21874712)
chr5 (5-57)||(23526293-23526345)
chr5 (1-207)||(43122541-43122747)
chr5 (1-66)||(16258124-16258189)
chr5 (12-57)||(21883017-21883062)
chr5 (1-66)||(22591843-22591908)
chr5 (1-66)||(22595398-22595463)
chr5 (47-111)||(20779083-20779147)
chr5 (2-60)||(21561114-21561172)
chr5 (2-60)||(21983266-21983324)
[»] chr8 (15 HSPs)
chr8 (1-247)||(22054049-22054295)
chr8 (1-247)||(22027629-22027875)
chr8 (1-247)||(16268573-16268819)
chr8 (1-168)||(19985445-19985612)
chr8 (1-168)||(21928693-21928860)
chr8 (1-247)||(28984097-28984343)
chr8 (1-171)||(22374131-22374301)
chr8 (1-247)||(31413881-31414127)
chr8 (2-207)||(6606819-6607024)
chr8 (3-247)||(29300777-29301021)
chr8 (5-67)||(30310497-30310559)
chr8 (5-57)||(21163883-21163935)
chr8 (5-60)||(21391214-21391269)
chr8 (5-60)||(21780540-21780595)
chr8 (5-67)||(15536749-15536811)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-247)||(6166-6412)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-256)||(9696-9951)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-247)||(263375-263621)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-247)||(203530-203776)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-247)||(40207-40453)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-235)||(4758-4992)
scaffold0348 (1-247)||(17393-17639)
[»] scaffold0067 (4 HSPs)
scaffold0067 (5-247)||(64515-64757)
scaffold0067 (5-247)||(49093-49335)
scaffold0067 (5-247)||(58127-58369)
scaffold0067 (1-246)||(29774-30019)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-240)||(98492-98731)
scaffold0020 (1-171)||(176212-176382)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-247)||(396-642)
scaffold0222 (1-243)||(20967-21209)
[»] scaffold0029 (3 HSPs)
scaffold0029 (9-207)||(115751-115949)
scaffold0029 (6-247)||(93808-94049)
scaffold0029 (8-57)||(8553-8602)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-255)||(8371-8625)
scaffold0235 (1-255)||(18585-18839)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-247)||(53332-53578)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-247)||(22271-22517)
[»] chr6 (22 HSPs)
chr6 (1-247)||(21567042-21567288)
chr6 (9-243)||(34642645-34642879)
chr6 (1-255)||(14376967-14377221)
chr6 (5-255)||(18797666-18797916)
chr6 (1-243)||(19437990-19438232)
chr6 (1-207)||(24515465-24515671)
chr6 (1-188)||(21474643-21474830)
chr6 (32-247)||(15462320-15462535)
chr6 (1-247)||(24367384-24367630)
chr6 (1-204)||(10465899-10466102)
chr6 (1-188)||(25770887-25771074)
chr6 (1-66)||(16813805-16813870)
chr6 (10-113)||(27559029-27559132)
chr6 (1-243)||(19456011-19456253)
chr6 (1-243)||(19466156-19466398)
chr6 (1-66)||(8720756-8720821)
chr6 (47-132)||(20010599-20010684)
chr6 (4-60)||(23081594-23081650)
chr6 (5-67)||(21764976-21765038)
chr6 (5-55)||(25756670-25756720)
chr6 (2-99)||(19486346-19486443)
chr6 (5-57)||(22437043-22437095)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-255)||(8755-9009)
[»] scaffold0203 (1 HSPs)
scaffold0203 (2-239)||(764-1001)
[»] scaffold0072 (1 HSPs)
scaffold0072 (6-243)||(54200-54437)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-251)||(1757-2007)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-247)||(454-700)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-255)||(164310-164564)
scaffold0023 (5-57)||(30487-30539)
[»] scaffold0053 (2 HSPs)
scaffold0053 (5-247)||(65211-65453)
scaffold0053 (1-243)||(62681-62923)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-168)||(7266-7433)
[»] scaffold1914 (1 HSPs)
scaffold1914 (7-108)||(1145-1246)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-189)||(15279-15467)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-243)||(5118-5360)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-243)||(325860-326102)
scaffold0004 (1-105)||(319534-319638)
[»] chr1 (18 HSPs)
chr1 (1-243)||(20832878-20833120)
chr1 (1-247)||(21961193-21961439)
chr1 (1-247)||(24096593-24096839)
chr1 (1-247)||(20074687-20074933)
chr1 (1-247)||(38909804-38910050)
chr1 (1-247)||(48426039-48426285)
chr1 (1-247)||(52988907-52989153)
chr1 (1-132)||(20297664-20297795)
chr1 (1-243)||(21742530-21742772)
chr1 (1-247)||(37680215-37680461)
chr1 (1-247)||(31536975-31537221)
chr1 (1-207)||(21739014-21739220)
chr1 (5-67)||(21228538-21228600)
chr1 (1-243)||(22015723-22015965)
chr1 (1-247)||(20853738-20853984)
chr1 (5-188)||(22435715-22435898)
chr1 (2-108)||(18273072-18273178)
chr1 (1-243)||(19857444-19857686)
[»] scaffold0523 (1 HSPs)
scaffold0523 (1-243)||(5593-5835)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-243)||(70261-70503)
[»] scaffold0034 (3 HSPs)
scaffold0034 (4-243)||(1864-2103)
scaffold0034 (1-247)||(70521-70767)
scaffold0034 (1-138)||(11815-11952)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-243)||(39242-39484)
scaffold0010 (5-67)||(14753-14815)
scaffold0010 (6-204)||(180753-180951)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-243)||(5334-5576)
[»] scaffold0156 (1 HSPs)
scaffold0156 (32-243)||(37092-37303)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-243)||(2784-3026)
[»] scaffold1426 (1 HSPs)
scaffold1426 (1-247)||(1516-1762)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-243)||(9681-9923)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-243)||(50258-50500)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-243)||(63428-63670)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-255)||(1220-1474)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-255)||(7885-8139)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-243)||(8930-9172)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-243)||(5206-5448)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-243)||(792-1034)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-247)||(41884-42130)
[»] scaffold0405 (1 HSPs)
scaffold0405 (32-174)||(5824-5966)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-171)||(29752-29922)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-247)||(610-856)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-243)||(34490-34732)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-243)||(43328-43570)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-171)||(42923-43093)
[»] scaffold1056 (1 HSPs)
scaffold1056 (3-168)||(1949-2113)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-243)||(724-966)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-247)||(11126-11372)
[»] scaffold0079 (1 HSPs)
scaffold0079 (5-171)||(36723-36889)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-247)||(514262-514508)
[»] scaffold2062 (1 HSPs)
scaffold2062 (1-243)||(781-1028)
[»] scaffold0088 (1 HSPs)
scaffold0088 (5-247)||(30083-30325)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-207)||(5994-6200)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-243)||(194-435)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-245)||(51802-52046)
[»] scaffold2165 (1 HSPs)
scaffold2165 (1-244)||(712-955)
[»] scaffold0865 (1 HSPs)
scaffold0865 (1-188)||(1181-1368)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-207)||(16826-17032)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-188)||(28194-28381)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-140)||(4362-4501)
scaffold0017 (5-113)||(16979-17087)
[»] scaffold1845 (1 HSPs)
scaffold1845 (1-67)||(1213-1279)
[»] scaffold1530 (2 HSPs)
scaffold1530 (1-99)||(801-899)
scaffold1530 (182-243)||(736-797)
[»] scaffold1517 (1 HSPs)
scaffold1517 (1-247)||(1396-1642)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-246)||(4213-4458)
[»] scaffold0165 (1 HSPs)
scaffold0165 (74-248)||(12108-12282)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-247)||(67017-67263)
[»] scaffold0309 (1 HSPs)
scaffold0309 (42-207)||(12916-13081)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-113)||(23832-23944)
[»] scaffold0080 (3 HSPs)
scaffold0080 (5-57)||(32218-32270)
scaffold0080 (5-67)||(10152-10214)
scaffold0080 (5-67)||(12807-12869)
[»] scaffold0190 (1 HSPs)
scaffold0190 (4-246)||(30238-30480)
[»] scaffold0546 (1 HSPs)
scaffold0546 (5-174)||(101-270)
[»] scaffold0109 (1 HSPs)
scaffold0109 (5-174)||(13037-13206)
[»] scaffold0609 (1 HSPs)
scaffold0609 (5-149)||(1186-1330)
[»] scaffold0273 (1 HSPs)
scaffold0273 (5-57)||(379-431)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-105)||(451-555)
[»] scaffold0139 (1 HSPs)
scaffold0139 (139-243)||(19016-19120)
[»] scaffold0042 (1 HSPs)
scaffold0042 (5-57)||(36733-36785)
[»] scaffold0819 (1 HSPs)
scaffold0819 (6-57)||(453-504)
[»] scaffold0081 (2 HSPs)
scaffold0081 (5-56)||(21944-21995)
scaffold0081 (5-56)||(37368-37419)
[»] scaffold1881 (1 HSPs)
scaffold1881 (5-67)||(393-455)
[»] scaffold0451 (1 HSPs)
scaffold0451 (5-67)||(13945-14007)
[»] scaffold0285 (1 HSPs)
scaffold0285 (5-67)||(5327-5389)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-67)||(17489-17551)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-67)||(229765-229827)
[»] scaffold0443 (2 HSPs)
scaffold0443 (32-113)||(12080-12161)
scaffold0443 (192-247)||(11958-12013)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-62)||(33281-33342)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-174)||(153714-153887)
[»] scaffold0708 (1 HSPs)
scaffold0708 (75-247)||(5128-5300)
[»] scaffold1423 (1 HSPs)
scaffold1423 (5-60)||(291-346)
[»] scaffold0611 (1 HSPs)
scaffold0611 (5-60)||(9356-9411)
[»] scaffold0412 (1 HSPs)
scaffold0412 (5-188)||(15492-15675)
[»] scaffold0261 (2 HSPs)
scaffold0261 (32-87)||(12352-12407)
scaffold0261 (32-87)||(20532-20587)
[»] scaffold0181 (1 HSPs)
scaffold0181 (26-113)||(28862-28949)
[»] scaffold0120 (1 HSPs)
scaffold0120 (5-60)||(14420-14475)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-67)||(5811-5877)
[»] scaffold0289 (1 HSPs)
scaffold0289 (5-67)||(117-179)
[»] scaffold0180 (1 HSPs)
scaffold0180 (2-60)||(30923-30981)
[»] scaffold0177 (2 HSPs)
scaffold0177 (5-67)||(11269-11331)
scaffold0177 (5-67)||(14954-15016)
[»] scaffold0130 (1 HSPs)
scaffold0130 (9-67)||(7696-7754)
[»] scaffold0031 (1 HSPs)
scaffold0031 (5-67)||(115953-116015)
[»] scaffold0993 (1 HSPs)
scaffold0993 (8-60)||(1318-1370)
[»] scaffold0605 (1 HSPs)
scaffold0605 (47-111)||(1565-1629)
[»] scaffold0518 (1 HSPs)
scaffold0518 (1-29)||(2198-2226)
[»] scaffold0501 (1 HSPs)
scaffold0501 (5-57)||(263-315)
[»] scaffold0297 (1 HSPs)
scaffold0297 (5-57)||(7570-7622)
[»] scaffold0006 (1 HSPs)
scaffold0006 (4-60)||(104562-104618)


Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 12577346 - 12577100
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12577346 gatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 12577247  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12577246 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 12577147  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  12577146 tagagttggtggaaaagtttttgctttgactggtacacagactgcta 12577100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 19716463 - 19716717
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||||     
T  19716463 gagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggt 19716562  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| |||||||||||  |||||||||| || ||||| || ||  ||||||| || |||||| | |||||||||||||||||||    
T  19716563 cagaaaggacacactctagctgattgcaagcgtagtgatgttgtttgttataactgcaacaaagagggccatatcagttcgcagtgcacacagccgaaga 19716662  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| |||||||||||||||||| |||||||    
T  19716663 aggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtga 19716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 19721026 - 19721280
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||||     
T  19721026 gagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggt 19721125  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| |||||||||||  |||||||||| || ||||| || ||  ||||||| || |||||| | |||||||||||||||||||    
T  19721126 cagaaaggacacactctagctgattgcaagcgtagtgatgttgtttgttataactgcaacaaagagggccatatcagttcgcagtgcacacagccgaaga 19721225  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| |||||||||||||||||| |||||||    
T  19721226 aggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtga 19721280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 23097464 - 23097710
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||| ||||  |||||     
T  23097464 gagagatgctcctgctgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatcagaagaagtgcttcaagtgtggt 23097563  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   | ||  | |||||| | ||||||||||| || ||||||||| |||| ||||| ||||||||| | |||||||| ||||| ||||    
T  23097564 cagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgatgaggagggccacatcagttcacagtgcactcagccaaaga 23097663  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    || |||||  |||||| || || ||||||||||||||||||||||||    
T  23097664 agattagaactggtgggaaggtgtttgctttgactggtacgcagact 23097710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 23274590 - 23274352
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || |||||    |||||||| |||||||||||||||||||| |||||||| || |||||||||||||| ||||| ||||||    
T  23274590 gagagatgctcctactgaaattgtttgcaacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtgga 23274491  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| ||||| ||||| || ||  | || |||||||| || ||||| ||||| || |||||| | ||||||||||| |||||||    
T  23274490 cagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatcagttcacagtgcacacaaccgaaga 23274391  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggta 239  Q
    |||||||   |||||| ||||| |||||| |||||||||    
T  23274390 aggttaggactggtggtaaagtgtttgctctgactggta 23274352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 20848585 - 20848340
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||| | |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  20848585 gagagatgctcctgttgagattgtt-gctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 20848487  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  20848486 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 20848387  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || ||||||||||||||||||||||||    
T  20848386 agactagaattggtggaaaggtgtttgctttgactggtacgcagact 20848340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 24704932 - 24705130
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||| ||||||||||||  | ||||| || ||||| ||||||||||||||||| || |||||| |  |||| |  ||||| ||||||   |||||  |||    
T  24704932 gatgttcctgctgagattatctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttccagtgtggcaaga 24705031  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaagg 203  Q
    |||||||||   |||| |||||||||||   |||  |||| ||||  |||||||||||||||||||||||  || |||||||||  ||||| |||||||    
T  24705032 agggtcacactttagctgattgcaagcgtaatgacattgtgtgcttcaattgtaatgaagagggtcacataggttctcagtgcaagcagcctaagaagg 24705130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 28350872 - 28350685
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| |||||||||||| ||||| |  |||||||| |||||||||||||||||||| ||||| |     |||||||| ||||| ||| |||||||     
T  28350872 gagagatgttcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgcaatggtgatgagaaaaagtgcttccgatgtggg 28350773  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
     |||| || || | | |||| || |||||||| |||||| |||| ||||  |||||| | ||||| |||||  ||||| | |||||||    
T  28350772 aagaaagggcatacgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatctcagttcgcagtgca 28350685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 22462931 - 22462993
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||| ||||||    
T  22462931 gatgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgt 22462993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 11351161 - 11351330
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| || |||||| | ||||| |   |||| |||||| | |||||  |||    
T  11351161 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccaaaggaggtagagaaatgtttctggtgtggcaaga 11351260  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    ||||||| |   |||| ||||||||||   ||||| |||| ||||  ||||| || ||||||||||||||    
T  11351261 agggtcatacattagctgattgcaagcatagtgatattgtgtgcttcaattgcaaggaagagggtcacat 11351330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 23205306 - 23205245
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    |||||||| | ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  23205306 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 23676910 - 23676849
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    |||||||| | ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  23676910 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23676849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 24657108 - 24657216
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||| ||||||||||||   |||||| || ||||| |||||||||||||||||||  |||||| |  |||| | ||||||||||||| | |||||  |||    
T  24657108 gatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaaga 24657207  T
Q  105 agggtcaca 113  Q
    |||||||||    
T  24657208 agggtcaca 24657216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21320459 - 21320505
Alignment:
Q  11 cctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||    
T  21320459 cctgctgagattgtctgttttaattgtggcgagaaaggccacaagag 21320505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 23116509 - 23116571
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| | ||||| |||||||| || ||||||| |||||||||||||||||| ||||||    
T  23116509 gatgctccttcagagattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 23116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 21901533 - 21901469
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  21901533 agagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 21901469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 23028912 - 23028963
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||||||||| || |||||| | ||||| |||||||||||||||||    
T  23028912 gatgctcctgctgagattgtctgtttt-attgtggtgagaaaggccacaagag 23028963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 24678480 - 24678428
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||| |||||||||||| || || ||||| ||||| |||||||||||||||||    
T  24678480 gatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagag 24678428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 18050850 - 18051096
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18050850 gatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 18050949  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18050950 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgttataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 18051049  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  18051050 tagagttggtggaaaagtttttgctttgactggtacacagactgcta 18051096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 14283267 - 14283513
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||| | |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||     
T  14283267 gagagatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 14283366  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| ||||||||||| |||||||||||||| ||||| || || ||||||||||| ||||| || |||||| ||||||||||||    
T  14283367 cagaagggtcacacattagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagggtcatatcagcacacagtgcccacagccgaaga 14283466  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||   ||||| ||||| ||||||||||||||||||||||||    
T  14283467 aggttagaaccggtgggaaagtgtttgctttgactggtacgcagact 14283513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 11385322 - 11385568
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||     
T  11385322 gagagatgctcctgctgagatagtttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggt 11385421  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   | ||  | |||||| | ||||||||||| || ||||||||| |||| ||||| ||||||||| | |||||||| || || ||||    
T  11385422 cagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgatgaggagggccacatcagttcacagtgcactcaaccaaaga 11385521  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    || |||||  |||||| || || ||||||||||||||||||||||||    
T  11385522 agattagaactggtgggaaggtgtttgctttgactggtacgcagact 11385568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 12712564 - 12712762
Alignment:
Q  9 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaaggg 108  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  12712564 ctcctgttgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaaggg 12712663  T
Q  109 tcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttag 207  Q
    |||| || |||| |||||||| || |||||| ||||||||||||| || ||||  |||||||| |||| | |||||||||| || | ||||||||||||    
T  12712664 tcacgtgttagctgattgcaaacgtggtgatattgtatgctataactgcaatggggagggtcatatcaattctcagtgcactcaacggaagaaggttag 12712762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14145017 - 14144871
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||     
T  14145017 gagagatgctcctgctgagatagtttgttttaagtatggcgagaaaggccacaagagtaacgtttgtaccaaggaggagaagaagtgcttcaggtgtggt 14144918  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatg 147  Q
    || ||||||||| || |||| ||||||||||| ||||||||||||||    
T  14144917 caaaagggtcacgtgttagctgattgcaagcgtggtgatgttgtatg 14144871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 14140919 - 14140789
Alignment:
Q  117 tagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtgg 216  Q
    |||| ||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||    
T  14140919 tagctgattgcaagcgtggtgatgttgtatgttataattgtaacgaagagggccacatcagtactcagtgcacacagccgaagaaggttagaactggtgg 14140820  T
Q  217 aaaagtttttgctttgactggtacgcagact 247  Q
     || || ||||||||||||||||||||||||    
T  14140819 gaaggtatttgctttgactggtacgcagact 14140789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 13676807 - 13676565
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  ||||||||  ||||||||||||||||||| ||||||   || |||||||||||||  ||||| ||||||    
T  13676807 gagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtacttcaggtgtgga 13676708  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| ||||| ||||| || ||  | || |||||||| || ||||| ||||| || |||||| | |||||  |||| |||||||    
T  13676707 cagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatcagttcacagtgtgcacaaccgaaga 13676608  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||   ||||| ||||| |||||| |||||||||||||    
T  13676607 aggttagaaccggtggtaaagtgtttgctctgactggtacgca 13676565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 13965561 - 13965807
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| | ||| |  |||||||| ||||||| |||||||||||| ||||||   || ||||| |  || || ||||| |||||     
T  13965561 gagagatgctcctgctgagattgattgctacaagtgtggtgagaaagaccacaagagtaatgtttgtggtaaagatgatagaaaatgcttcaggtgtggt 13965660  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||  ||||| || |||||||| || ||| |||| ||||| ||||| |||| ||||||||| |||||| | |||||  |  |||||||||    
T  13965661 cagaagggtcacagtctagctgaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagttcacagtgtcctgagccgaaga 13965760  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  |||||| || || ||||| ||||||||||||||||||    
T  13965761 aggctagaactggtgggaaggtgtttgcattgactggtacgcagact 13965807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 15099496 - 15099741
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| |||||||| || |||||||| |||||||||||||||||||||||||||   |  |||||||||||||| ||||| |||||     
T  15099496 gagagatgctcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggt 15099595  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||  ||||| ||||| || ||  | || || ||||| || ||||| || ||||| |||||| | ||||| || ||||||||||    
T  15099596 cagaagggacacactctagatgattgtaagcgtggggacatcgtttgttataactgcaatgaggaaggtcatatcagttcgcagtgtacgcagccgaaga 15099695  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagac 246  Q
    |||||||    ||||| || || |||||||| ||||||| ||||||    
T  15099696 aggttaggacaggtggtaaggtgtttgctttaactggtatgcagac 15099741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 21755768 - 21755522
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||  ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   || ||||||| |||||||||||| |||||     
T  21755768 gagagatgctccctctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggtgtggt 21755669  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || || ||||| || ||| |||| ||||| || || |||| ||||||||| || ||  | |||||  |  |||||||||    
T  21755668 cagaagggtcacactttagctgaatgtaagcgtggggatattgtctgctacaactgcaatggagagggtcatattagctcacagtgtcctgagccgaaga 21755569  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || || || ||||| ||||||||||||||||||    
T  21755568 aggttagaactgggggcaaggtgtttgcattgactggtacgcagact 21755522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 26091691 - 26091937
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  26091691 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 26091790  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  26091791 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 26091890  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || ||||||||||||||||||||||||    
T  26091891 agactagaattggtggaaaggtgtttgctttgactggtacgcagact 26091937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 26115483 - 26115725
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||| |||||||| |||||||  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  26115483 gagagatgctccggctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 26115582  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || ||||| |||| ||| ||||| || ||||| |||||  |  | |||||||    
T  26115583 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagtacacagtgtcctgaaccgaaga 26115682  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||  ||||  ||||||||| || ||||||||||||||||||||    
T  26115683 agactagaactggtggaaaggtgtttgctttgactggtacgca 26115725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 12798397 - 12798636
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||| | |||| || |||||||| ||||||||    ||||||||||||||||| |||||| ||| || ||||||||||||| ||||| |||||    
T  12798397 gagagatgctcatactgatattgtttgtttcaagtgtgga---aaaggccacaagagtaatgtttgtgaccgag-atgagaagaagtgcttcaggtgtgg 12798492  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   |||| |||||  |||| || |||||||| ||||| || ||||||||||| ||||| |||||| | ||||| |||||||| |||    
T  12798493 tcagaaaggacacactttagctgattgtgagcgtggggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacacagcctaag 12798592  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||| |||    ||||| || |||||||| ||||||||||||||    
T  12798593 aaggctaggacaggtggcaaggtttttgcgttgactggtacgca 12798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 40924710 - 40924956
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  40924710 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 40924809  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  40924810 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 40924909  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||| ||||| || ||||||||||||||||||||||||    
T  40924910 agactagaattgggggaaaggtgtttgctttgactggtacgcagact 40924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 49155657 - 49155411
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  49155657 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 49155558  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||||||||| |   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  49155557 cagaagggtcatagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 49155458  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || ||||||||||||||||||||||||    
T  49155457 agactagaattggtggaaaggtgtttgctttgactggtacgcagact 49155411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19150367 - 19150120
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||| || ||||| || |||||||| |||||||||||||| ||||| || ||| | | | ||| |||||||||| || || |||||    
T  19150367 gagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgtgtgatcga-gatcagaagaagtgctttaggtgtgg 19150269  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   | || ||||||||||| || ||| |||| ||||| || ||||||||||| || || || ||| | ||||| || || || |||    
T  19150268 tcagaaaggacacacattggctgattgcaagcgtggagatattgtttgctacaactgtaatgaagaaggacatattagttcgcagtgtacgcaacctaag 19150169  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgcagactg 248  Q
    |||| |||  | ||||| ||||| ||||| |||||||||||||| ||||    
T  19150168 aaggctaggataggtggtaaagtatttgcgttgactggtacgcaaactg 19150120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 20749766 - 20749519
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||| || ||||| || |||||||| |||||||||||||| ||||| || ||| | | | ||| |||||||||| || || |||||    
T  20749766 gagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgtgtgatcga-gatcagaagaagtgctttaggtgtgg 20749668  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   | || ||||||||||| || ||| |||| ||||| || ||||||||||| || || || ||| | ||||| || || || |||    
T  20749667 tcagaaaggacacacattggctgattgcaagcgtggagatattgtttgctacaactgtaatgaagaaggacatattagttcgcagtgtacgcaacctaag 20749568  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgcagactg 248  Q
    |||| |||  | ||||| ||||| ||||| |||||||||||||| ||||    
T  20749567 aaggctaggataggtggtaaagtatttgcgttgactggtacgcaaactg 20749519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 12459984 - 12459781
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| |||||||||||| || ||||  |||||||| || |||||||||||||| || | ||||   |  ||||||| ||| ||||| || |||||     
T  12459984 gagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaaatgttttaggtgtggt 12459885  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||| || || ||||| || ||  |||| |||||||| || |||||||| ||||| || ||| | ||||| || ||||||||||    
T  12459884 cagaagggacacaccctagctgaatgtaagcgtggggacattgtctgctataactgcaatgaagaaggtcatattagttcacagtgtactcagccgaaga 12459785  T
Q  201 aggt 204  Q
    ||||    
T  12459784 aggt 12459781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 13024700 - 13024454
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||| || |||||||  |||||||| || ||||||||||| || || | || |   |   |||||| ||| |||||||| |||||     
T  13024700 gagagatgctcctgctgaaattgtttgttacaagtgtggtgaaaaaggccacaaaagcaatgcttatggtagatatgagaggaaatgtttcaggtgtggt 13024601  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     |||| || ||||  ||||| || || ||||| || ||  |||| ||||| || || || ||||| ||||| |||||| ||||||| || ||||||||||    
T  13024600 tagaaaggacacaccctagctgaatgtaagcgtggagacattgtctgctacaactgcaacgaagaaggtcatatcagttctcagtgtactcagccgaaga 13024501  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| |||    ||||| ||||| ||||| ||||||||||||||||||    
T  13024500 aggctaggaccggtgggaaagtgtttgcattgactggtacgcagact 13024454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 16947365 - 16947611
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||| | ||| || |||||||  |||||||| || ||||||||||||||||| | ||||   |  ||||||| ||||||| | || |||||     
T  16947365 gagagatgctccagttgaaattgtttgttacaagtgtggtgaaaaaggccacaagagtaatgcttgtggtagagatgagaggaagtgtgttaggtgtggt 16947464  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| || || ||||| || ||  |||| ||||| || || || ||||||||||| |||||| | ||||| |  |||| |||||    
T  16947465 cagaaaggacacacactagctgaatgtaagcgtggagacattgtttgctacaactgcaacgaagagggtcatatcagttcacagtgtattcagctgaaga 16947564  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||   ||||| ||||| ||||| |||| |||||||||||||    
T  16947565 aggctagaaccggtgggaaagtgtttgcattgaatggtacgcagact 16947611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 9591715 - 9591549
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| ||||| || ||||| || ||||||||||||||||||||||| || |||||| |  | ||    ||||| ||| || | |||||  |||    
T  9591715 gatgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgtcctgaagagatcaagaaatgtgtccggtgtggcaaga 9591616  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
    ||||||| ||  |||| |||||||||||   |||| |||| ||||  ||||||||||||||||||||    
T  9591615 agggtcatattatagctgattgcaagcgaaatgatattgtgtgcttcaattgtaatgaagagggtca 9591549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 16726360 - 16726529
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| || || |||||||| || ||||||| |||||||||||||||||| |||||| |  | ||    ||||| ||| || |||||||  | |    
T  16726360 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatcaagaaatgtgtccgatgtggcaaaa 16726459  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    ||||||| ||  |||| |||||||||||   |||| |||| ||||  || ||||||||||||||||||||    
T  16726460 agggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacat 16726529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 17703374 - 17703543
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| || || |||||||| || ||||||| |||||||||||||||||| |||||| |  | ||    ||||| ||| || |||||||  | |    
T  17703374 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatcaagaaatgtgtccgatgtggcaaaa 17703473  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    ||||||| ||  |||| |||||||||||   |||| |||| ||||  || ||||||||||||||||||||    
T  17703474 agggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacat 17703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12203693 - 12203863
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| |||||||| ||| ||||| |  |||||||| ||||| |||||||||||||| |||||||     |||||||| ||||| ||| |||||||     
T  12203693 gagagatgttcctgctgtgattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgcttctgatgtggg 12203792  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
     |||| || || | | |||| || |||||||| | |||| |||| ||||  |||||| ||||||| |||||    
T  12203793 aagaaagggcatacgatagctgaatgcaagcgtgatgatattgtttgcttcaattgtgatgaagaaggtca 12203863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14261139 - 14261198
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    |||| |||||||| |||||||  |||| || |||||||| ||||||||||||||||||||    
T  14261139 gagatatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaa 14261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 15343575 - 15343541
Alignment:
Q  213 gtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||||||||| ||||||||||||||||||||||||    
T  15343575 gtggaaaagtgtttgctttgactggtacgcagact 15343541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 11984343 - 11984279
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtac 69  Q
    |||||||| ||||||||   |||||| || ||||| ||||||||||||||||| || ||||||||    
T  11984343 gatgctccagctgagattacttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtac 11984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 53750380 - 53750626
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53750380 gatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 53750479  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53750480 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggccacatcagtactcagtgcacacagccgaagaaggt 53750579  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  53750580 tagagttggtggaaaagtttttgctttgactggtacacagactgcta 53750626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 51603702 - 51603948
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51603702 gatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 51603801  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  51603802 agggtcacatgctagccgattgcaagcgcggtgatgttgtgtgctataattgtaatgaagagggccacatcagtactcagtgcacacagccgaagaaggt 51603901  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  51603902 tagagttggtggaaaagtttttgctttgactggtacacagactgcta 51603948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 16151002 - 16150748
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || ||||| | |||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||     
T  16151002 gagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 16150903  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||| || || ||  | || ||||   | |||||||    
T  16150902 cagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtgatgaagaggggcatattagctcgcaatgcaagaaaccgaaga 16150803  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| |||||||||||| ||||  |||||||    
T  16150802 aggttagaaccggtgggaaagtgtttgcattgactggtacgtagaccactagtga 16150748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 16155148 - 16154894
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || ||||| | |||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||     
T  16155148 gagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 16155049  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||| || || ||  | || ||||   | |||||||    
T  16155048 cagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtgatgaagaggggcatattagctcgcaatgcaagaaaccgaaga 16154949  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| |||||||||||| ||||  |||||||    
T  16154948 aggttagaaccggtgggaaagtgtttgcattgactggtacgtagaccactagtga 16154894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 27903751 - 27903505
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||  | |||||||  |||||||| | |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||     
T  27903751 gagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagagtaatgtctgcaccaaagatgagaagaagtgtttcagatgtggt 27903652  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| |||||  || | || || |||||||| || ||| |||| || ||||| |||||||| |||||  |||| ||| | |||||||| || || ||||    
T  27903651 cagaaaggtcatgtgttggctgaatgcaagcgtggagatattgtttgttataactgtaatgaggagggcaacattagttcacagtgcacgcaacctaaga 27903552  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||| |||  | | |||||||| ||||||||||||||||||||||||    
T  27903551 aggtcagaacttgaggaaaagtatttgctttgactggtacgcagact 27903505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 20893397 - 20893151
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| || |||||| ||||||| || ||||||   |  ||||||| |||||| ||||| |||||     
T  20893397 gagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggcaacaagagcaatgtttgtggtagagatgagaggaagtgcttcaggtgtggt 20893298  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| || |||||||| || ||| |||| | ||| || || ||||||||||| || |||||| | ||||| ||  |||||||||    
T  20893297 cagaagggacacaatttagctgaatgcaagcgtggggatattgtctactacaactgcaatgaagaggggcatatcagttcgcagtgtactgagccgaaga 20893198  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||||||||| || ||||||||||||||||||||||||    
T  20893197 aggttagaactggtggaaaggtgtttgctttgactggtacgcagact 20893151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 11204138 - 11204384
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| || ||||||   |  ||||| |  || || ||||| |||||     
T  11204138 gagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtagagatgatagaaaatgcttcaggtgtggt 11204237  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||  |||||  | |||||||| || ||| |||| ||||| ||||| |||| ||||||||| |||||| | |||||  |  ||||||| |    
T  11204238 cagaagggtcacagtctagcttaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagttcacagtgtcctgagccgaaaa 11204337  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  |||||| || || |||||||||||||||||||| |||    
T  11204338 aggctagaactggtgggaaggtgtttgctttgactggtacgcanact 11204384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 3261700 - 3261946
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  3261700 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 3261799  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  3261800 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 3261899  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || ||||||||||||||||||||||||    
T  3261900 agactagaattggtggaaaggtgtttgctttgactggtacgcagact 3261946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 29450443 - 29450689
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||      ||||| | |||||||||||| |||||     
T  29450443 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaggagatgataggaagtgtttcaggtgtggt 29450542  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || |||||||||||| | |||||  |  |||||||||    
T  29450543 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcacatcagttcacagtgtcctgagccgaaga 29450642  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||| ||||| || ||||||||||||||||||||||||    
T  29450643 agactagaattgggggaaaggtgtttgctttgactggtacgcagact 29450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 7357633 - 7357387
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  ||| |||| ||||||||||||||||| || |||| |   || ||||||| |||||| ||||| |||||     
T  7357633 gagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaagagcaatgtttatggtaaagatgagaggaagtgcttcaggtgtggt 7357534  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| ||||| || || |||| ||||||||| || ||| | |||||  |  |||||||||    
T  7357533 cagaagggtcacaatttagctgaatgcaagcgtggagacattgtctgctacaactgcaatggagagggtcatattagttcacagtgtcctgagccgaaga 7357434  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  | |||| || || ||||| ||||||||||| ||||||    
T  7357433 aggctagaactagtgggaaggtgtttgcattgactggtacacagact 7357387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15073725 - 15073555
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| || ||||| |||||||| || ||||||||||||||||| || |||  |   ||||||||||||||||| || ||||||    
T  15073725 gagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtgga 15073626  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
     |||| || ||||   |||| ||||||||||   |||||||||| |||||||||||| ||||||| |||||    
T  15073625 aagaaaggacacacattagctgattgcaagctttgtgatgttgtttgctataattgtgatgaagaaggtca 15073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 14993273 - 14993515
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || |||||||| |||||||| || ||||||||||||||||| ||||||  |   ||  |||||||||| ||||| |||||     
T  14993273 gagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgtgagaagaagaagtgcttcaggtgtggt 14993372  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||| ||||||||||  || |||||||| ||||| || || ||||| || ||||| |||||| | ||||| || || || ||||    
T  14993373 cagaaaggacacactttagctgattgcaagcatggggatgttgtttgctacaactgcaatgaggaaggtcatatcagttcgcagtgtacgcaacctaaga 14993472  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| || || |||||||||| |||||||||    
T  14993473 aggttaggacaggtggcaaggtgtttgctttgaatggtacgca 14993515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 44658772 - 44659018
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  44658772 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 44658871  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||| |||| || || ||||| |||| |||  |||| || ||| | |||||  |  | |||||||    
T  44658872 cagaagggtcacagtttagctgaatgcaagcgtggggatattgtctgttacaattgcaatggagaatgtcatattagttcacagtgtcctgaaccgaaga 44658971  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  ||||  ||||||||| || |||||||||| |||||||||||||    
T  44658972 agactagaactggtggaaaggtgtttgctttgaatggtacgcagact 44659018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 18259804 - 18259630
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacag 103  Q
    |||||||||| || | || ||||| ||||||||||| || ||||||||||||||||| ||||||   |  |||||||||||||| ||||| ||||| |||    
T  18259804 agatgctcctactaatattgtttgctttaagtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagtgcttcaggtgtggtcag 18259705  T
Q  104 aagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagt 178  Q
    || || ||||  ||||| ||||| ||||| || ||  |||| |||||||| || ||||| || ||||| ||||||    
T  18259704 aaaggacacactctagctgattgtaagcgtggggacattgtttgctataactgcaatgaggaaggtcatatcagt 18259630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15267142 - 15266936
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |  | || ||||| || |||||||  ||||| ||||| |||||||| ||||||  ||  |||||||||||||| ||||| |||||     
T  15267142 gagagatgctcctacgaatattgtttgcttcaagtgtgatgagaagggccataagagtaatgtttgtgacagagatgagaagaagtgcttcaggtgtggt 15267043  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||| ||||  || ||  |||| |||||||| || || ||||| ||||| |||||| |  |||| || ||||||||||    
T  15267042 cagaaaggacacactctagctgattgtaagcatggagacattgtttgctataactgcaacgaagaaggtcatatcagttcgtagtgtacgcagccgaaga 15266943  T
Q  201 aggttag 207  Q
    |||||||    
T  15266942 aggttag 15266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 13513712 - 13513546
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| ||||| || ||||| || ||||||||||||||||||||||| || |||||| |  | ||    ||||| ||| || | |||||  |||    
T  13513712 gatgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgtcctgaagagatcaagaaatgtgtccggtgtggcaaga 13513613  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
    ||||||| ||  |||| |||||||||||   |||| |||| ||||  ||||||||||||||||||||    
T  13513612 agggtcatattatagctgattgcaagcgaaatgatattgtgtgcttcaattgtaatgaagagggtca 13513546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18224123 - 18224185
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| || ||||||||||||||||||||| |||| ||||||    
T  18224123 gatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagtgtaatgtttgt 18224185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18604469 - 18604531
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| | |||||  |||||||||| |||||||||||||||||||||||||| ||||||    
T  18604469 gatgctccttcggagattatttgttttaactgtggcgagaaaggccacaagagtaatgtttgt 18604531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 8709040 - 8708978
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    ||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  8709040 agatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 8708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 13945015 - 13944769
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13945015 gatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 13944916  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13944915 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggccacatcagtactcagtgcacacagccgaagaaggt 13944816  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13944815 tagagttggtggaaaagtttttgctttgactggtacacagactgcta 13944769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 8744528 - 8744774
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8744528 gatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 8744627  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  8744628 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggccacatcagtactcagtgcacacaaccgaagaaggt 8744727  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  8744728 tagagttggtggaaaagtttttgctttgactggtacacagactgcta 8744774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 16384506 - 16384724
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  16384506 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaagtccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 16384605  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  16384606 cagaagggtcacatgttggctgattgcaagcgtggtgatgttgtatgctataattgtaatgaagagggccatatcagtactcagtgcacacagccgaaga 16384705  T
Q  201 aggttagagttggtggaaa 219  Q
    ||||||||  |||||||||    
T  16384706 aggttagaactggtggaaa 16384724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 16831662 - 16831908
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||     
T  16831662 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 16831761  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||| || |||| || |||||||| |||||||||||||| ||||| || || |||||||| || |||||||| |||||||||||||||||||    
T  16831762 cagaagggtcacgtgttagcggactgcaagcgtggtgatgttgtatgttataactgcaacgaagagggccatatcagtacacagtgcacacagccgaaga 16831861  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||||||||| || ||||||||||||||||||||||||    
T  16831862 aggttagaactggtggaaaggtgtttgctttgactggtacgcagact 16831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 31941898 - 31941656
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||     
T  31941898 gagaaatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtggt 31941799  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||| || |||||||| ||||||||||| || |||||||| ||||| ||||| || |||||| |  |||| || ||||||||||    
T  31941798 cagaagggacacactctagctgactgcaagcgtggtgatgttgtttgttataattgcaatgaggagggccatatcagttcatagtgtacgcagccgaaga 31941699  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   |||||| || || ||||||||||||||||||||    
T  31941698 aggttaggactggtggtaaggtgtttgctttgactggtacgca 31941656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 17189369 - 17189127
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||     
T  17189369 gagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtggt 17189270  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || |||| | | ||  | |||||| | ||||||||||| || ||||||||| |||| ||||| ||||||||| | ||||| || ||||| ||||    
T  17189269 cagaaaggacacacgttggctaactgcaagtggggtgatgttgtttgttataattgtgatgaggagggccacatcagttcacagtgtactcagccaaaga 17189170  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    || |||||   ||||| ||||| ||||| ||||||||||||||    
T  17189169 agattagaaccggtgggaaagtgtttgcgttgactggtacgca 17189127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 24190299 - 24190053
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||     
T  24190299 gagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtggt 24190200  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || |||| | | ||  | |||||| | ||||||||||| || ||||||||| |||| ||||| ||||||||| | ||||| || ||||| ||||    
T  24190199 cagaaaggacacacgttggctaactgcaagtggggtgatgttgtttgttataattgtgatgaggagggccacatcagttcacagtgtactcagccaaaga 24190100  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    || |||||   ||||| ||||  ||||| ||||||||||||||||||    
T  24190099 agattagaaccggtgggaaagagtttgcgttgactggtacgcagact 24190053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 31692319 - 31692561
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||| ||||| |||||||||| |||||||  |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||     
T  31692319 gagaaatgcttctgctgagatcgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtggt 31692418  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     ||||||| ||||  ||||| || |||||| | ||||||||||| || ||||| || ||||| ||||| || |||||| | ||||| || ||||||||||    
T  31692419 tagaagggacacactctagctgactgcaagagtggtgatgttgtttgttataactgcaatgaggagggccatatcagttcacagtgtacgcagccgaaga 31692518  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   |||||| || || |||||| |||||||||||||    
T  31692519 aggttaggactggtggtaaggtgtttgctctgactggtacgca 31692561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 12357661 - 12357903
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||| ||||||||||||| ||||| |  ||||||||||| ||||||||||||||||| || |||   || |||||||||||||| ||||| |||||     
T  12357661 gagagatactcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtgataaagatgagaagaagtgcttcaggtgtggt 12357760  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||| ||||| ||||| || || ||||| |||||||| || ||||| || ||||| |||||| | ||||| ||||| |||||||    
T  12357761 cagaaaggacacacattagctgattgtaagcggggagacgttgtttgctataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaaga 12357860  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| ||||| |||||| |||||||||||||    
T  12357861 aggttaggaccggtggtaaagtgtttgctctgactggtacgca 12357903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 11949107 - 11949301
Alignment:
Q  49 ccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgc 148  Q
    |||||||||||| |||||||| || |||||||||||||| ||||||||||| ||||| || |||||  |||| ||||| ||||| || |||||||| |||    
T  11949107 ccacaagagtaatgtttgtactaaagatgagaagaagtgcttcagatgtggtcagaaaggacacatattagctgattgtaagcggggagatgttgtttgc 11949206  T
Q  149 tataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||| || ||||| || ||||||||||||   ||||| ||  || |||||||||||||  | ||||| ||||| |||||| |||||||||||||    
T  11949207 tataactgcaatgaggaaggtcacatcagtttgcagtgtacgtagacgaagaaggttaggatcggtggtaaagtgtttgctctgactggtacgca 11949301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 16326848 - 16327089
Alignment:
Q  7 tgctcctgctgaga-tagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaa 105  Q
    |||||||||||||| | ||||||| ||||||||| || |||||||||||||| || ||||||   |  ||||||| ||| |||||||| ||||| |||||    
T  16326848 tgctcctgctgagacttgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtagagatgagaggaaatgtttcaggtgtggtcagaa 16326947  T
Q  106 gggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggtt 205  Q
    ||| ||||   |||| || || ||||| || ||  |||| ||||| || || |||| ||||||||| |||||| | ||||| ||  ||||||||||||||    
T  16326948 gggacacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcatatcagttcgcagtgtactaagccgaagaaggtt 16327047  T
Q  206 agagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||  ||||||||| || ||||| ||||||||||||||||||    
T  16327048 agaactggtggaaaggtgtttgcattgactggtacgcagact 16327089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 10408963 - 10408717
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||| |||||||| |||||||  || ||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  10408963 gagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 10408864  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  10408863 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 10408764  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || ||||||||||||||||||||||||    
T  10408763 agactagaattggtggaaaggtgtttgctttgactggtacgcagact 10408717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 28757314 - 28757068
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  28757314 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 28757215  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || ||||| |||| ||| ||||| || ||| | |||||  |  |||||||||    
T  28757214 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagttcacagtgtcctgagccgaaga 28757115  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||| ||||| || ||||||||||||||||||||||||    
T  28757114 agactagaattgggggaaaggtgtttgctttgactggtacgcagact 28757068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 35983176 - 35982934
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| ||| |||  |||| || |||||||| |||||||||||||||||||| || ||| ||| || |||||||||||||||||||||||||    
T  35983176 gagagatgctcctactgtgattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgaccgag-atgagaagaagtgtttcagatgtgg 35983078  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
    |||||| || ||||   | || ||||||||||| || ||| |||| ||||| || |||||||| || || || || ||| | || || || ||||| |||    
T  35983077 acagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagttcgcattgtacgcagcctaag 35982978  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||    ||||| || || ||||||||||||| ||||||    
T  35982977 aaggttaggacaggtggcaaggtgtttgctttgactgttacgca 35982934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 13317703 - 13317873
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||  | |||||||  |||||||| |  ||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||     
T  13317703 gagagatgctcctgttgatgttgtttgttacaagtgtggtgcaaaaggccacaaaagtaatgtttgcaccaaagatgagaagaagtgtttcagatgtggt 13317802  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
    || || |||||  |  |||| ||||||||||| || ||||| || || ||||| ||||||||||| |||||    
T  13317803 caaaaaggtcatgttttagcggattgcaagcgtggggatgtggtttgttataactgtaatgaagaaggtca 13317873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 47126939 - 47126693
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  47126939 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 47126840  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  47126839 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 47126740  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| ||||||| || || ||||||||||||||||||||||||    
T  47126739 agactagaattggtggtaaggtgtttgctttgactggtacgcagact 47126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 14290666 - 14290908
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||||||  |||| || |||||||| |||||||||||||||||||| || |||      |||||||||||||| || || ||||||    
T  14290666 gagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgattgagatgagaagaagtgctttaggtgtgga 14290765  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||| ||||| ||||| || |||||| | |||||||||||| |||||||||| || || ||  | |||||||   |||| ||||    
T  14290766 cagaaaggacacactttagctgattgtaagcgtggggatgttatttgctataattgtgatgaagagggacatattagctcgcagtgcaagaagcctaaga 14290865  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||| |    ||||| || || ||||||||||||||||||||    
T  14290866 aggttcggacaggtggcaaggtgtttgctttgactggtacgca 14290908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 18131481 - 18131723
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| | ||| |  ||||||||||||||||||||||||||||| ||||||   || |||||||||||||| ||||| |||||     
T  18131481 gagagatgctcctgttgagattgattgctacaagtgtggcgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggt 18131580  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || |||    ||||  |||| ||||| || ||||| || |||||||| || ||||| ||  |||| || ||| | ||||| || || | |||||    
T  18131581 cagaaaggacacgcattagctaattgtaagcgtggggatgtagtgtgctataactgcaatgaggaaagtcatattagttcgcagtgtactcaactgaaga 18131680  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||   ||||| ||||| ||| || |||||||||||||    
T  18131681 aggttagaaccggtggtaaagtgtttactctgactggtacgca 18131723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 247
Target Start/End: Original strand, 10417225 - 10417425
Alignment:
Q  47 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtat 146  Q
    |||||||||||||| | ||| ||  | ||||||||||| ||||||||||| || ||||| |||||  || | || ||||||||||| || ||| |||| |    
T  10417225 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggcggattgcaagcgtggagatattgttt 10417324  T
Q  147 gctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgcagac 246  Q
    | | ||| |||  ||| ||||||||||| ||| | |||||| | || || |||||||| |||  ||| |||||||| |||||||||||||||||||||||    
T  10417325 gttttaactgtggtgatgagggtcacattagttcgcagtgcccgcaacctaagaaggtcagaactggaggaaaagtatttgctttgactggtacgcagac 10417424  T
Q  247 t 247  Q
    |    
T  10417425 t 10417425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12857630 - 12857800
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| || ||||| |||||||| || || ||||||| |||||| || |||  |   |||||||||||||||||| ||||||||    
T  12857630 gagagatgctcctactgagattgtctgtttcaagtgtggtgaaaagggccacatgagtaatgtatgtgactgtgatgagaagaagtgtttccgatgtgga 12857729  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
     |||| || |||||  |||| || ||||||||  ||||| |||| ||||| |||||| ||||||| |||||    
T  12857730 aagaaaggacacataatagctgagtgcaagcgtcgtgatattgtttgctacaattgtgatgaagaaggtca 12857800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 16825413 - 16825655
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || |||||||| |||||||| || ||||||||||||||||| ||||||  |   |||||||||||||| ||||| |||||     
T  16825413 gagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgtgatgagaagaagtgcttcaggtgtggt 16825512  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     | || || ||||   |||| ||||| ||||| || ||  |||| ||||| || |  ||||| || ||||| ||||||   ||||| || ||||| ||||    
T  16825513 aaaaaaggacacactttagctgattgtaagcgtggggacattgtttgctacaacttcaatgaggaaggtcatatcagtttgcagtgtacgcagcctaaga 16825612  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| || || ||||||||||||||||||||    
T  16825613 aggttaggacaggtggcaaggtgtttgctttgactggtacgca 16825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 11958315 - 11958561
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||| || ||||||| ||||||||| || ||||||||||| || || | ||||   |  ||||||| |||||||||||| |||||     
T  11958315 gagagatgctcctgctgaaattgtttgttataagtgtggtgaaaaaggccacaaaagcaatgcttgtggtagagatgagaggaagtgtttcaggtgtggt 11958414  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || || |  ||||| || || ||||| |  ||  |||| ||||| || || || |||||  |||| |||||| |  |||| || ||||||||||    
T  11958415 cagaaaggacatacactagctgaatgtaagcgtgaggacattgtctgctacaactgcaacgaagaaagtcatatcagttcatagtgtactcagccgaaga 11958514  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| |||    ||||| ||||| ||||| ||||||||||||||||||    
T  11958515 aggctaggaccggtgggaaagtgtttgcattgactggtacgcagact 11958561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15008718 - 15008858
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| |||||||||||| ||||| |  |||||||| |||| ||||||||||||||| |||||   ||| | |||| ||||||| ||| ||||||||    
T  15008718 gagagatgttcctgctgagattgtttgctacaagtgtggtgagagaggccacaagagtaatgtttg---caatggtgaggagaagtgcttccgatgtgga 15008814  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgt 144  Q
     ||||||| || | | |||| || |||||||| |||||| ||||    
T  15008815 aagaaggggcatacgatagctgaatgcaagcgtggtgatattgt 15008858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 12181339 - 12181099
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| ||  |||| || |||||||| || ||||||||||||||||| || |||   |  |||||||||||||| ||||| |||||     
T  12181339 gagagatgctcctactgacattttttgcttcaagtgtggtgaaaaaggccacaagagtaaagtctgtgatagagatgagaagaagtgcttcagttgtggt 12181240  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    | ||| || ||||  ||||| ||||| ||||  || ||  |||| || |||||||| ||  | || ||||| |||||| |  |||| || || |||||||    
T  12181239 cggaaaggacacacactagctgattgtaagcttggggacattgtttgttataattgcaacaaggaaggtcatatcagttcgtagtgtacgcaaccgaaga 12181140  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacg 241  Q
    |||||||    ||||| ||||| ||||||||||||||||||    
T  12181139 aggttaggaccggtggtaaagtgtttgctttgactggtacg 12181099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 15230595 - 15230428
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacag 103  Q
    ||||| |||||||||||| ||||| |  |||||||| || || |||||||||||||| |||||||     |||||||| ||||||||| |||||||  ||    
T  15230595 agatgttcctgctgagattgtttgctacaagtgtggtgaaaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgtttctgatgtgggaag 15230496  T
Q  104 aagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
    || || || | | |||| || |||||||| |||||| |||| ||||  |||||| ||||||| |||||    
T  15230495 aaagggcatacgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgatgaagaaggtca 15230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 15236463 - 15236296
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacag 103  Q
    ||||| |||||||||||| ||||| |  |||||||| || || |||||||||||||| |||||||     |||||||| ||||||||| |||||||  ||    
T  15236463 agatgttcctgctgagattgtttgctacaagtgtggtgaaaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgtttctgatgtgggaag 15236364  T
Q  104 aagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
    || || || | | |||| || |||||||| |||||| |||| ||||  |||||| ||||||| |||||    
T  15236363 aaagggcatacgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgatgaagaaggtca 15236296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 17494641 - 17494400
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| | ||||||| ||||| || || ||||| || ||||||||||||||||| ||||||   |  ||||||||||||||  |||| |||||     
T  17494641 gagagatgctcatactgagattgtttgcttcaaatgtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagtg-ctcaggtgtggt 17494543  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| || || ||| | || ||  |||| |||||||| || || || || ||||| || ||| | ||||| || || |||||||    
T  17494542 cagaaaggacacacactagctgactgtaagtgtggagacattgtttgctataactgcaacgaggaaggtcatattagttcgcagtgtactcaaccgaaga 17494443  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| ||||| |||||| |||||||||||||    
T  17494442 aggttaggaccggtggtaaagtgtttgctctgactggtacgca 17494400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 23079166 - 23079228
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||| || ||||||    
T  23079166 gatgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgt 23079228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 13317863 - 13317914
Alignment:
Q  196 gaagaaggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||||||    
T  13317863 gaagaaggtcagaactggtggaaaagtgtttgctttgactggtacgcagact 13317914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 15066052 - 15065990
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||||| ||| || |||||||| ||||| ||||||||||||||||| || ||||||    
T  15066052 gatgctcctgctgcgattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15065990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 23414939 - 23415001
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| || ||||| || | |||||||||||||||||||||||| ||||||    
T  23414939 gatgctcctgcggagattgtctgtttcaactatggcgagaaaggccacaagagtaatgtttgt 23415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2037046 - 2037111
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  2037046 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 2037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2040787 - 2040852
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  2040787 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 2040852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14039741 - 14039676
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  14039741 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 14039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 11861334 - 11861151
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| ||||| || | ||| || ||||| ||||||||||||||||| || |||||| |  |||| | |||||| |||||| | |||||  |||    
T  11861334 gatgctcctgcggagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtgaagaaatgtttctggtgtggtaaga 11861235  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
    ||||||| |   |||| ||||||||||   ||||| |||| ||||  ||||  || ||||||||||| ||  || |||||||||    
T  11861234 agggtcatactttagctgattgcaagcatagtgatattgtgtgcttcaattccaaggaagagggtcatattggttctcagtgca 11861151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 12501914 - 12501775
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||| ||||||||||||    ||||| || ||||||||||||||||||||||| || |||||| |  |||| |  ||||| |||||| | |||||  |||    
T  12501914 gatgttcctgctgagattacctgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttccggtgtggcaaga 12501815  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgt 144  Q
    |||||||||   |||| ||||||||||  |||||| ||||    
T  12501814 agggtcacacattagctgattgcaagcatggtgatattgt 12501775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 17497672 - 17497617
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||| ||||| || |||||||  ||||| ||||||||||||||||||||    
T  17497672 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaa 17497617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 16695145 - 16695083
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    |||||||| ||||||||   |||||| || |||||||||||||||| ||||||||| ||||||    
T  16695145 gatgctccagctgagattacttgtttcaattgtggcgagaaaggccgcaagagtaatgtttgt 16695083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 14873734 - 14873786
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||| ||||||||| || |||||||| ||||| ||||||||||| |||||    
T  14873734 gatgctcatgctgagattgtctgttttaattgtggtgagaaaggccataagag 14873786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 19727532 - 19727500
Alignment:
Q  214 tggaaaagtttttgctttgactggtacgcagac 246  Q
    ||||| |||||||||||||||||||||||||||    
T  19727532 tggaagagtttttgctttgactggtacgcagac 19727500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 17266426 - 17266672
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  17266426 gatgctcctgctgagatagtgtgttttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccgaggatgagaagaagtgcttcaggtgtggacaga 17266525  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17266526 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 17266625  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  17266626 tagagttggtggaaaagtttttgctttgactggtacctagactgcta 17266672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 25851352 - 25851106
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| || |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   || ||||| | |||||| ||||| |||||     
T  25851352 gagagatgctcttgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgataggaagtgcttcaggtgtggt 25851253  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||  ||||| || | |||||| || ||  |||| ||||| || || |||| ||||||||| || ||| | |||||  |  |||||||||    
T  25851252 cagaagggtcacagtctagctgaatacaagcgtggagacattgtctgctacaactgcaatggagagggtcatattagttcacagtgtcctgagccgaaga 25851153  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  |||||| || || ||||||||||||||||||||||||    
T  25851152 aggctagaactggtgggaaggtatttgctttgactggtacgcagact 25851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 20345562 - 20345316
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||||||| ||||||   || ||||| | |||||| ||||| |||||     
T  20345562 gagagatgctcctgctgagattgtttgttacaagtgtggtgagaaagcccacaagagtaatgtttgtggtaaagatgataggaagtgcttcaggtgtggt 20345463  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||  ||||  || |||||||| || ||  |||| ||||| || || ||||  || ||||| || ||| | |||||  |  |||||||||    
T  20345462 cagaagggtcacagtctagttgaatgcaagcgtggggacattgtctgctacaactgcaatggggaaggtcatattagttcacagtgtcctgagccgaaga 20345363  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  |||||| || || |||||||| |||||||||||||||    
T  20345362 aggctagaactggtgggaaggtatttgctttaactggtacgcagact 20345316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 22505959 - 22505713
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| ||||||||||||||||| || ||||||   || || |||| |||||| ||||| |||||     
T  22505959 gagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaaagacgagaggaagtgcttcaggtgtggt 22505860  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||| ||| || |   |||| || || ||||| || ||  |||| ||||| || || |||| |||||||||||||||| | |||||  |  | |||||||    
T  22505859 cagatgggacatagcttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcacatcagttcacagtgtcctgaaccgaaga 22505760  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || || || ||||| ||||||||||||||||||    
T  22505759 aggttagaactgggggcaaggtgtttgcattgactggtacgcagact 22505713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 14884079 - 14884325
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||| |||||||| |||||||  |||||||| |||||||||||||||||||| || |||   |  ||||| | |||||| ||||| |||||     
T  14884079 gagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtctgtgggagagatgataggaagtgcttcaggtgtggt 14884178  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   | || || |||||||| || ||  |||| || || || || ||||  || ||||| || ||| | |||||  |  |||||| ||    
T  14884179 cagaagggtcacagtttggctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatattagttcacagtgtcctgagccgagga 14884278  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| ||||||| ||||| ||||||||||||||||||||||||    
T  14884279 agactagaattggtgggaaagtgtttgctttgactggtacgcagact 14884325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 23077993 - 23078239
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| || ||||| |||||||| || ||||||||||| || || | ||||   |  ||||||| ||| |||||||| |||||     
T  23077993 gagagatgctcctgctgagattgtatgtttcaagtgtggtgaaaaaggccacaaaagcaatgcttgtggtagagatgagaggaaatgtttcaggtgtggt 23078092  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| || || ||||| || ||  |||| ||||| || || || ||||| ||||| |||||| |  |||| || ||||||||||    
T  23078093 cagaaaggacacaccctagctgaatgtaagcgtggagacattgtttgctacaactgcaacgaagaaggtcatatcagttcatagtgtactcagccgaaga 23078192  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| |||    ||||| ||||| ||||| |||||| |||||||||||    
T  23078193 aggctaggaccggtgggaaagtgtttgcattgactagtacgcagact 23078239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 23563256 - 23563498
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || ||||| || |||||||| || ||||||||||||||||| || |||   |  |||||||||||||| ||||| |||||     
T  23563256 gagagatgctcctactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggt 23563355  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| || || ||| | || ||   ||| || ||||| || ||||| || ||||| || ||| | ||||| || ||||||||||    
T  23563356 cagaaaggacacacactagctgactgtaagggtggagacaatgtttgttataactgcaatgaggaaggtcatattagttcgcagtgtacgcagccgaaga 23563455  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   |||||| || || ||||||||||| ||||||||    
T  23563456 aggttaggactggtggtaaggtgtttgctttgaccggtacgca 23563498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 18782408 - 18782346
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  18782408 gatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 18782346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 247
Target Start/End: Complemental strand, 20824728 - 20824487
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaa 105  Q
    ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||| | ||| ||  | ||||||||||| ||||||||||| || |||||    
T  20824728 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 20824629  T
Q  106 gggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggtt 205  Q
     |||||  || | |  || |||||||| || ||| |||| || | ||| |||  ||| || |||||||| ||| | |||||||| || || ||||||||     
T  20824628 aggtcatgtgttggtggactgcaagcgtggagatattgtttgttttaactgtggtgatgaaggtcacattagttcgcagtgcacgcaacctaagaaggtc 20824529  T
Q  206 agagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||   ||| |||||||| ||||||||||||||||||||||||    
T  20824528 aggactggaggaaaagtatttgctttgactggtacgcagact 20824487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 247
Target Start/End: Complemental strand, 22465184 - 22464984
Alignment:
Q  47 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtat 146  Q
    |||||||||||||| | ||| | | | ||||||||||| ||||||||||| || ||||||||||| ||| | || || |||||||| || ||| | || |    
T  22465184 ggccacaagagtaatgcttgcatccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtggagatatcgttt 22465085  T
Q  147 gctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgcagac 246  Q
    | | |||||||   || ||||| ||||| ||  | |||||||| || || |||||||| ||| |||| || || ||||| |||||||||||||| |||||    
T  22465084 gttttaattgtggcgatgagggccacattagctcgcagtgcacgcaacctaagaaggtcagaattggagggaaggttttcgctttgactggtacccagac 22464985  T
Q  247 t 247  Q
    |    
T  22464984 t 22464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 23669912 - 23669764
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| ||||  |   ||||||| |||||||||||||||||||| ||||| |     || ||||||||||| ||| ||||||||    
T  23669912 gagagatgctcctgctgagattgtttcctaccagtgtggtgagaaaggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtgga 23669813  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgct 149  Q
     ||||||| || | | |||| || |||||||| |||||| |||| ||||    
T  23669812 aagaaggggcatacgatagctgaatgcaagcgtggtgatattgtttgct 23669764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21870366 - 21870432
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||||| |||||||| |||| || |||||||| ||||||| |||||||||||| ||||||    
T  21870366 gagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgtttgt 21870432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21874646 - 21874712
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||||| |||||||| |||| || |||||||| ||||||| |||||||||||| ||||||    
T  21874646 gagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgtttgt 21874712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 23526345 - 23526293
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  23526345 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagag 23526293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 43122747 - 43122541
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| || ||| ||||| ||||| |  |||||||||||||  |||||||||||||| || || |     || ||||||||||| ||| ||||||||    
T  43122747 gagagatgttcatgcagagattgtttgctacaagtgtggcgagaggggccacaagagtaatgtctgcaatggtgaggagaagaagtgcttccgatgtgga 43122648  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     ||||||| ||   | |||| || |||||||| |||||| |||| ||||  |||||| | ||||| || ||  ||||| | ||||| |||||||| ||||    
T  43122647 aagaaggggcatgcgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggacatctcagttcacagtgtacacagcctaaga 43122548  T
Q  201 aggttag 207  Q
    |||||||    
T  43122547 aggttag 43122541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16258124 - 16258189
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  16258124 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 16258189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 21883062 - 21883017
Alignment:
Q  12 ctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||||||||| || |||||||| |||||||||||||||||||||||    
T  21883062 ctgctgagattgtctgttttaattgtggcgagaaaggccacaagag 21883017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22591843 - 22591908
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  22591843 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22591908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22595398 - 22595463
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| ||||| |||||||||||||| |||||    
T  22595398 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22595463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 20779147 - 20779083
Alignment:
Q  47 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtca 111  Q
    |||||||||||||| | ||| ||| | ||||||||||| ||||||||||| || |||||||||||    
T  20779147 ggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtca 20779083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 21561114 - 21561172
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||| |||||||||||| ||||| || ||||||||  |||| ||||||||||||||    
T  21561114 agagatgttcctgctgagattgtttgcttcaagtgtggtaagaagggccacaagagtaa 21561172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 21983266 - 21983324
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||| |||||||||||| ||||| | || |||||| ||||| ||||||||||||||    
T  21983266 agagatgttcctgctgagattgtttgctataggtgtggtgagaagggccacaagagtaa 21983324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 22054295 - 22054049
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||     
T  22054295 gagagatgcttctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcagatgtggt 22054196  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||| ||||| || || |||||||| || |||||||| |||||||||||||||||||    
T  22054195 cagaagggtcaccttttagcggattgcaagcgtggtgatgttgtatgttataactgcaacgaagagggccatatcagtacacagtgcacacagccgaaga 22054096  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  |||||||||||| ||||||||||||||||||||||||    
T  22054095 aggatagaactggtggaaaagtgtttgctttgactggtacgcagact 22054049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 22027629 - 22027875
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||     
T  22027629 gagagatgctcctgctgagatagtttgttacaagtgtggcgataaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggt 22027728  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| ||||| ||| | || || ||||| |||||||| |  ||||||||||| || |||||| |||||||||||||||||||||    
T  22027729 cagaagggtcacacattagctgattgtaagaggggagacgttgtttgctataactacaatgaagagggccatatcagttctcagtgcacacagccgaaga 22027828  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||   ||||||||||| ||||| ||||| ||||||||||||    
T  22027829 aggttagaaccggtggaaaagtgtttgcattgaccggtacgcagact 22027875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 16268573 - 16268819
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| |||||||||||||||||||| ||||||   || ||||||| |||||| ||||| |||||     
T  16268573 gagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggt 16268672  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||||||||| |  ||||| || |||||||| || ||| |||| ||||| ||||| |||| ||||||||| |||||| | |||||  |  |||||||||    
T  16268673 cagaagggtcatagcctagctgaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagttcacagtgtcctgagccgaaga 16268772  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||  |||||||||||| ||||||||||||||||||||||||    
T  16268773 aggctagaactggtggaaaagtgtttgctttgactggtacgcagact 16268819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19985612 - 19985445
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||| ||||||||||| ||| ||||||||||||| || |||  |   ||||||||||||| |||||||||||||    
T  19985612 gagagatgctcctactgagattgtttgtttcaagtgtggcgaaaaaagccacaagagtaatgtatgtgaccgtgatgagaagaagtatttcagatgtgga 19985513  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagaggg 168  Q
    |||||  | ||||   |||| ||||||||| | || |||||||| |||||||||||| ||||||||||    
T  19985512 cagaaatgacacacattagctgattgcaagagtggggatgttgtttgctataattgtgatgaagaggg 19985445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21928860 - 21928693
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||  ||||||| ||||||||||| || |||||| ||||||| ||  || ||| || |||||||||||||||||||||||||    
T  21928860 gagagatgctcctactgagattctttgtttcaagtgtggcgaaaagggccacgagagtaatgtaagtgaccgag-atgagaagaagtgtttcagatgtgg 21928762  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagaggg 168  Q
    |||||| || ||||   | |  ||||||||||| |||||||| || |||||||||||| ||||||||||    
T  21928761 acagaaaggacacactttgggtgattgcaagcgtggtgatgtcgtttgctataattgtgatgaagaggg 21928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 28984343 - 28984097
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||| | |||||| |||||||  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  28984343 gagagatgctccagttgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 28984244  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  28984243 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 28984144  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || |||||| |||||||||| ||||||    
T  28984143 agactagaattggtggaaaggtgtttgctctgactggtacacagact 28984097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 22374301 - 22374131
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||| ||||| ||||||| || ||||| |||||||| || |||| |||||||||||| || |||  |   ||||| ||||||||||| || ||||||    
T  22374301 gagagattctcctactgagattgtctgtttcaagtgtggtgaaaaagaccacaagagtaatgtatgtgaccgtgatgaaaagaagtgttttaggtgtgga 22374202  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
     |||| || ||||   |||| ||||||||||| |||||| |||| |||||||||||| ||||||| |||||    
T  22374201 aagaaaggacacacattagctgattgcaagcgtggtgatattgtttgctataattgtgatgaagaaggtca 22374131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 31413881 - 31414127
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || |||||||| |||||||| || |||||||| ||||| || | ||||   |  ||||||| ||||||||| || |||||     
T  31413881 gagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccataagagcaatgcttgtggtagagatgagaggaagtgttttaggtgtggt 31413980  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| || || ||||| || ||  |||| ||||| || || || ||||| ||||| |||||| | ||||| || ||| ||||||    
T  31413981 cagaaaggacacacactagctgaatgtaagcgtggggacattgtttgctacaactgcaacgaagaaggtcatatcagttcacagtgtactcagtcgaaga 31414080  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||   ||||| ||||| ||||| |||||||||| |||||||    
T  31414081 aggctagaaccggtgggaaagtgtttgcattgactggtatgcagact 31414127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 6606819 - 6607024
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggac 101  Q
    ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||||||| ||||| |     || ||||||||||| ||| ||||||||     
T  6606819 agagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaa 6606918  T
Q  102 agaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaa 201  Q
    ||||||| || | | |||| || |||||||| || ||| |||| ||||  |||||| ||||||| || ||  ||||| | ||||| |||||||| |||||    
T  6606919 agaaggggcatacgatagctgaatgcaagcgtggggatattgtttgcttcaattgtgatgaagaaggacatctcagttcacagtgtacacagcctaagaa 6607018  T
Q  202 ggttag 207  Q
    ||||||    
T  6607019 ggttag 6607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 247
Target Start/End: Original strand, 29300777 - 29301021
Alignment:
Q  3 gagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggaca 102  Q
    |||||| ||| ||||| || ||||||||||||||||| || | |||||||||||| || | ||||   |  ||||| | ||||||||| || ||||| ||    
T  29300777 gagatgttcccgctgaaattgtttgttttaagtgtggtgaaagaggccacaagagcaatgcttgtggtagagatgaaaggaagtgttttaggtgtggtca 29300876  T
Q  103 gaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaag 202  Q
    ||  || ||||  ||||| || || ||||| || ||  |||| | |||||| || |||||||| ||||| |||||| ||||||| || ||||||||||||    
T  29300877 gagaggacacacactagctgaatgtaagcgtggggacattgtctactataactgcaatgaagaaggtcatatcagttctcagtgtactcagccgaagaag 29300976  T
Q  203 gttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    | |||  | ||||| ||||| ||| | ||||| ||||||||||||    
T  29300977 gctaggatcggtgggaaagtgttttcattgacgggtacgcagact 29301021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 30310497 - 30310559
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||||    
T  30310497 gatgctcctgcggatattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 30310559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 21163883 - 21163935
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||||||||| || |||||||| ||||||||||||| |||||||||    
T  21163883 gatgctcctgctgagattgtctgttttaattgtggcgagaaagaccacaagag 21163935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 21391214 - 21391269
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||||||||| |||||||||   ||||| ||||||||||||||||||||    
T  21391214 gatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaa 21391269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 21780540 - 21780595
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||||||||| |||||||||   ||||| ||||||||||||||||||||    
T  21780540 gatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaa 21780595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 15536811 - 15536749
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| | |||||  |||||||||| ||||||||  |||||||||||||||| ||||||    
T  15536811 gatgctccttcggagattatttgttttaattgtggcgaagaaggccacaagagtaatgtttgt 15536749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 6166 - 6412
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  6166 gagagatgctcctgtcgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 6265  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||| ||||||| ||||| ||||| || ||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||| | |||||    
T  6266 cagaagggtcacgtgctagctgattgtaagcgtggcgatattgtatgctataattgtaacgaatagggccacatcagtactcagtgcacacaacagaaga 6365  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||||||||| || ||||||||||||||||| ||||||    
T  6366 aggttagaactggtggaaaggtatttgctttgactggtacacagact 6412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 9696 - 9951
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||     
T  9696 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 9795  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     ||||||||||| |  |||| ||||||||||| |||||||||||||| ||||| || || |||||| | || |||||||| |||||||||| ||||||||    
T  9796 tagaagggtcaccttttagcggattgcaagcgtggtgatgttgtatgttataactgcaacgaagagtgccatatcagtacacagtgcacactgccgaaga 9895  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtgat 256  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||| ||| ||||    
T  9896 aggttagaactggtggaaaagtgtttgctttgactggtacgcagactactaatgat 9951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 263621 - 263375
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||     
T  263621 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 263522  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||| |  |||| |||||||||   |||||||||||||| ||||| ||||| |||||||| || |||||||| |||||||||||| ||||||    
T  263521 cagaagggtcaccttttagcggattgcaaggatggtgatgttgtatgttataactgtaacgaagagggccatatcagtacacagtgcacacagtcgaaga 263422  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  | |||||||||| ||||||||||||||||||||||||    
T  263421 aggttagaactagtggaaaagtgtttgctttgactggtacgcagact 263375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 203776 - 203530
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||     
T  203776 gagagatgctcctggtgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtggt 203677  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||| |  |||| |||||||||   |||||||||||||| ||||| ||||| |||||||| || |||||||| |||||||||||| ||||||    
T  203676 cagaagggtcaccttttagcggattgcaaggatggtgatgttgtatgttataactgtaacgaagagggccatatcagtacacagtgcacacagtcgaaga 203577  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  | |||||||||| ||||||||||||||||||||||||    
T  203576 aggttagaactagtggaaaagtgtttgctttgactggtacgcagact 203530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 40453 - 40207
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| |||||     
T  40453 gagagatgctcctgctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgataagaagtgcttcaggtgtggt 40354  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     |||||||||||||| |||| |||||||||||  ||||||||||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||    
T  40353 tagaagggtcacatgttagcggattgcaagcgttgtgatgttgtatgttataactgcaacgaagagggccatatcagtactcagtgcacacagccgaaga 40254  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||   ||||| ||||| ||||||||||||||||||||||||    
T  40253 aggttagaaccggtgggaaagtgtttgctttgactggtacgcagact 40207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 4758 - 4992
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  4758 gagagatgctcctgctgagatagtctgttataagtgtggccagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtgga 4857  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| || || || ||||| || |||||||||||||| |||||||||| ||    
T  4858 cagaagggtcacatgttagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaggagggccatatcagtactcagtgtacacagccgagga 4957  T
Q  201 aggttagagttggtggaaaagtttttgctttgact 235  Q
    ||||||||   ||||||||||| ||||||||||||    
T  4958 aggttagaaccggtggaaaagtgtttgctttgact 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 17393 - 17639
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||      
T  17393 gagagatgctcctgctgagatagtttgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgctttaggtgtgat 17492  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    || ||||||||||   |||| |||| || ||| |||||||||||||| || ||||| || |||||||| || |||||||||||||| |||||||||||||    
T  17493 caaaagggtcacacattagcggattacatgcgtggtgatgttgtatgttacaattgcaacgaagagggccatatcagtactcagtgtacacagccgaaga 17592  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  |||||| ||| | ||||||||||||||||||||||||    
T  17593 aggttagaactggtgggaaaatgtttgctttgactggtacgcagact 17639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 131; Significance: 5e-68; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 64515 - 64757
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||    
T  64515 gatgctcctgctgagatagtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcaga 64614  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    | || ||||  |||||  |||||||||| |||||||| || |||||||||||| |||||||||| || || ||| | ||||||||||| |||||||||||    
T  64615 aaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaagagggccatattagttcacagtgcacacaaccgaagaaggt 64714  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||  |||| | ||||| ||||||||| ||||||||||||||    
T  64715 tagaactggtaggaaagtgtttgctttggctggtacgcagact 64757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 49093 - 49335
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||    
T  49093 gatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcaga 49192  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    | || ||||  |||||  |||||||||| |||||||| || |||||||||||| |||||||||| || || ||| | ||||||||||| |||||||||||    
T  49193 aaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaagagggccatattagttcacagtgcacacaaccgaagaaggt 49292  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||  |||| | ||||| ||||||||| ||||||||||||||    
T  49293 tagaactggtaggaaagtgtttgctttggctggtacgcagact 49335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 58127 - 58369
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||    
T  58127 gatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcaga 58226  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    | || ||||  |||||  |||||||||| |||||||| || |||||||||||| |||||||||| || || ||| | ||||||||||| |||||||||||    
T  58227 aaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaagagggccatattagttcacagtgcacacaaccgaagaaggt 58326  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||  |||| | ||||| ||||||||| ||||||||||||||    
T  58327 tagaactggtaggaaagtgtttgctttggctggtacgcagact 58369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30019 - 29774
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| |||| |||| |||||||| || |||||||| |||||||||||||||||||||||||||   |  |||||||||||||| ||||| |||||     
T  30019 gagagatgttcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggt 29920  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    || ||||| ||||  ||||| ||||| ||| | || ||  | || || |||| ||| ||||| || ||||| |||||| | ||||| || || |||||||    
T  29919 caaaagggacacactctagctgattgtaagtgtggggacatcgtttgttatatttgcaatgaggaaggtcatatcagttcgcagtgtacgcaaccgaaga 29820  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagac 246  Q
    |||||||    ||||| || || |||||||||||||||||||||||    
T  29819 aggttaggacaggtggtaaggtgtttgctttgactggtacgcagac 29774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 98492 - 98731
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||||     
T  98492 gagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggt 98591  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| |||||||||||||| ||||| || || |||||||| || |||||| | |||||||||||||||||||    
T  98592 cagaaaggacacactctagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagggccatatcagttcgcagtgcacacagccgaaga 98691  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtac 240  Q
    |||||||   |||||| || || |||||| ||||||||||    
T  98692 aggttaggactggtggtaaggtgtttgctctgactggtac 98731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 176382 - 176212
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| | ||||| || ||||| |||||||| || ||||||||||||||||| || |||  |   ||||||||||||||||| || ||||||    
T  176382 gagagatgctcctacagagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtgga 176283  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
     |||| || ||||   |||| ||||||||||| ||||||||||| |||||||||||| ||||||| |||||    
T  176282 aagaaaggacacacattagctgattgcaagcgtggtgatgttgtttgctataattgtgatgaagaaggtca 176212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 396 - 642
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  || ||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||| |||||     
T  396 gagagatgctcctgctgagatcgtttgttacaaatgtggcaggaaaggccacaagagtgatgtttgtaccaaggatgagaagaagtgtttcaggtgtggt 495  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| ||||||||||| |||||||| || ||||||||||| || |||||| | |||||||||||||||||||    
T  496 cagaaaggacacagcctagctgattgcaagcgtggtgatgttgtttgctataactgcaatgaagagggccatatcagttcacagtgcacacagccgaaga 595  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||   | ||| ||||| ||||| ||||||||||| ||||||    
T  596 aggttagaaccgatgggaaagtgtttgcattgactggtacacagact 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 21209 - 20967
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||| |||||||||| ||||| |  |||||||| |||||||||||||||||||| |||||||| || | |||||||||||| ||||| ||||||    
T  21209 gagagatgcttctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaaggtgagaagaagtgcttcaggtgtgga 21110  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||  ||||| ||||| || ||  |  | |||||||| || ||||| ||||| |  |||||| | ||||| ||||| |||||||    
T  21109 cagaagggacacacattagttgattgtaagcggggagacataatttgctataactgcaatgaggagggccgtatcagttcacagtgtacacaaccgaaga 21010  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||   ||||| ||||| |||||| |||||||||||||    
T  21009 aggttagaaccggtggtaaagtgtttgctctgactggtacgca 20967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 119; Significance: 7e-61; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 115949 - 115751
Alignment:
Q  9 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaaggg 108  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  115949 ctcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaaggg 115850  T
Q  109 tcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttag 207  Q
    |||| || |||| ||||||||||| |||||| | |||||||||||||| ||||  |||||||| |||||| |||||||||| || ||||||||||||||    
T  115849 tcacgtgttagctgattgcaagcgtggtgatatagtatgctataattgcaatggggagggtcatatcagttctcagtgcactcaaccgaagaaggttag 115751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 93808 - 94049
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaa 105  Q
    ||||||||| |||| | |||||||  || ||||| | ||| |||||||||||||| | ||| ||  | ||||||||||| ||||||||||| || |||||    
T  93808 atgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 93907  T
Q  106 gggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggtt 205  Q
     |||||  || | || ||||||||||| || ||| |||| || | ||| |||  ||| ||||||||||| ||| | |||||||| || || ||||||||     
T  93908 aggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatgagggtcacattagttcgcagtgcactcaacctaagaaggtc 94007  T
Q  206 agagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||   ||| |||||||| ||||||||||||||||||||||||    
T  94008 aggactggaggaaaagtatttgctttgactggtacgcagact 94049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 8602 - 8553
Alignment:
Q  8 gctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||| |||||||||  | |||||||| |||||||||||||||||||||||    
T  8602 gctcttgctgagattatctgttttaattgtggcgagaaaggccacaagag 8553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 8371 - 8625
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| || ||| || ||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||     
T  8371 gagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaggatgagaagaagtgtttcaggtgtggt 8470  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||| ||||||||||| ||||| ||||| || ||||| || |||||| |||| || |||||| | |||||||  || |||||||    
T  8471 cagaagggacacactctagctgattgcaagcgtggtgacgttgtttgttataactgcaatgaatagggccatatcagttcgcagtgcaatcaaccgaaga 8570  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| |||||||||||||||||| |||||||    
T  8571 aggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtga 8625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 18585 - 18839
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| || ||| || ||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||     
T  18585 gagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaggatgagaagaagtgtttcaggtgtggt 18684  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||| ||||||||||| ||||| ||||| || ||||| || |||||| |||| || |||||| | |||||||  || |||||||    
T  18685 cagaagggacacactctagctgattgcaagcgtggtgacgttgtttgttataactgcaatgaatagggccatatcagttcgcagtgcaatcaaccgaaga 18784  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| |||||||||||||||||| |||||||    
T  18785 aggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtga 18839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 53332 - 53578
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||     
T  53332 gagagatgctcttgctgggatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgattcaggtgtggt 53431  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    || || || ||||| ||||  ||||||||||| ||||| || ||||| ||||| |||||||||||||| || |||||| | || |||||| |||||||||    
T  53432 caaaaaggacacatcctagttgattgcaagcgtggtgacgtggtatgttataactgtaatgaagagggccatatcagttcacaatgcacatagccgaaga 53531  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||   ||||| ||||| ||||| ||||||||||||||||||    
T  53532 aggttagaaccggtgggaaagtatttgcattgactggtacgcagact 53578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 22517 - 22271
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| || ||||  |||||     
T  22517 gagagatgctcctgttgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttttactaaggatgagaagaaatgcttcaagtgtggt 22418  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||  ||||||||||| ||||||||||| |||||||| || ||||||||||| || |||||| |||||||||||||||||||||    
T  22417 cagaaaggacacaccctagttgattgcaagcgtggtgatgttgtttgctataactgcaatgaagagggccatatcagttctcagtgcacacagccgaaga 22318  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||   | ||| | ||| ||||| ||||||||||| ||||||    
T  22317 aggttagaaccgttggtatagtgtttgcattgactggtactcagact 22271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 21567042 - 21567288
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| ||||| |||||     
T  21567042 gagagatgctcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 21567141  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   | ||  | |||||| | ||||||||||| || ||||||||| || | ||||| ||||||||| | |||||||| ||||| ||||    
T  21567142 cagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgataaggagggccacatcagttcccagtgcactcagccaaaga 21567241  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    || |||||   ||||||||||| ||||||||||||||||||||||||    
T  21567242 agattagaaccggtggaaaagtgtttgctttgactggtacgcagact 21567288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 34642645 - 34642879
Alignment:
Q  9 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaaggg 108  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  34642645 ctcctgcggagatagtttgctttaagtgtggcgagaagggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaaggg 34642744  T
Q  109 tcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttaga 208  Q
    |||| || |||| ||||| || || |||||| |||||||||| || || ||||  |||||||| |||||| |||||||||| || ||||||||||||||     
T  34642745 tcacgtgttagctgattgtaaacgtggtgatattgtatgctacaactgcaatggggagggtcatatcagttctcagtgcactcaaccgaagaaggttagg 34642844  T
Q  209 gttggtggaaaagtttttgctttgactggtacgca 243  Q
       ||||| ||||| ||||| ||| ||||||||||    
T  34642845 accggtgggaaagtgtttgccttggctggtacgca 34642879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 14376967 - 14377221
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||  | ||||| |  ||||| || |||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||     
T  14376967 gagagatgctcctgttgatgttgtttgctacaagtgcggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 14377066  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   ||||  |||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||| | || || |||||||||||||    
T  14377067 cagaaaggacacactttagctaattgtaagcgtggtgatgttgtttgttataactgcaatgaagagggccacatcagttcgcaatgtacacagccgaaga 14377166  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||||||||| ||||| |||||||||||||||||| |||||||    
T  14377167 aggttagaaccggtggaaaagtgtttgcattgactggtacgcagactactagtga 14377221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 255
Target Start/End: Complemental strand, 18797916 - 18797666
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||  || || ||||||| |||||||||||||||||||||||||||||| ||||| || || |||||| |||| |||||||| ||||| ||||    
T  18797916 gatgctcctgtggatattgtttgttataagtgtggcgagaaaggccacaagagtaatgtttgcactaaagatgagcagaaatgtttcaggtgtggtcaga 18797817  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    |||| ||||  ||||| ||||||||||| ||||| ||||| |||||||| || ||||| || || || |||||| | |||||||| || || ||||||||    
T  18797816 agggacacactctagctgattgcaagcgtggtgacgttgtttgctataactgcaatgatgaaggccatatcagttcacagtgcactcaaccaaagaaggt 18797717  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||   ||||| ||||| ||||| |||||||||||||||||| |||||||    
T  18797716 tagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtga 18797666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 19438232 - 19437990
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| ||| |||  |||||||| ||||||||||||  |||||| |||||||| || |||||||| ||||||||||| |||||     
T  19438232 gagagatgctcctgctgagatcgttcgttacaagtgtggtgagaaaggccacttgagtaatgtttgtactaaagatgagaataagtgtttcaggtgtggt 19438133  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| |||||||||||||| ||||| || || |||||| | || |||||| | |||||||||||||||||||    
T  19438132 cagaaaggacacactctagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagcgccatatcagttcgcagtgcacacagccgaaga 19438033  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   | |||| || || |||||| |||||||||||||    
T  19438032 aggttaggactagtggtaaggtgtttgctctgactggtacgca 19437990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24515465 - 24515671
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || ||||||| ||||||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||| |||||     
T  24515465 gagagatgctcctgttgatattgtttgttataagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggt 24515564  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||  | ||||  ||||| ||||| ||| | || |||||||| || ||||| || ||||| || |||||||||||| | ||||| || || |||| ||    
T  24515565 cagaaaagacacacactagctgattggaagaggggagatgttgtttgttataactgcaatgaggaaggtcacatcagttcgcagtgtacgcaaccgagga 24515664  T
Q  201 aggttag 207  Q
     ||||||    
T  24515665 cggttag 24515671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21474830 - 21474643
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||| |||||||| || ||||||||||||||||| || |||  |   |||||||||||||||||| |||||||     
T  21474830 gagagatgctcctactgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtggg 21474731  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
     |||| || ||||   | || || |||||||| |||||| |||| ||||| |||||| ||||||||||||| || ||| |||||||||    
T  21474730 aagaaaggacacacattggctgagtgcaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatattagttctcagtgca 21474643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 15462535 - 15462320
Alignment:
Q  32 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagc 131  Q
    |||||||| | |||||||||||||||||| || || ||||  ||||||||||| ||||||||||| || ||||| |||||  || | || || |||||||    
T  15462535 aagtgtggtgcgaaaggccacaagagtaatgtctgcaccagagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggctgagtgcaagc 15462436  T
Q  132 gcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgcttt 231  Q
    | || ||| | || || ||||| |||  ||| ||||| ||||| ||| | |||||||| || || |||||||| |||  ||| |||||||| ||||| ||    
T  15462435 ggggagatatcgtgtgttataactgtggtgaggagggccacattagttcgcagtgcacgcaacctaagaaggtcagaactggaggaaaagtatttgcctt 15462336  T
Q  232 gactggtacgcagact 247  Q
    ||||||||||||||||    
T  15462335 gactggtacgcagact 15462320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 24367630 - 24367384
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| || |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  24367630 gagagatgctcatgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 24367531  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || ||||| |||| ||| ||||| || ||| | |||||| |  | |||||||    
T  24367530 cagaagggtcacagtttagctgaatgcaagcggggggacattgtctgttacaattgcaatggagaaggtcatattagttcacagtgccctgaaccgaaga 24367431  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |   ||||  |||||| || || ||||||||||||||||||||||||    
T  24367430 aaactagaactggtgggaaggtgtttgctttgactggtacgcagact 24367384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 10465899 - 10466102
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||| |||||||||||| || ||||  |||||||| || |||||||||||||| || | ||||   |  ||||||| ||| ||||| || |||||     
T  10465899 gagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaaatgttttaggtgtggt 10465998  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||| || || ||||| || ||  |||| |||||||| || |||||||| ||||| || ||| | ||||| || ||||||||||    
T  10465999 cagaagggacacaccctagctgaatgtaagcgtggggacattgtctgctataactgcaatgaagaaggtcatattagttcacagtgtactcagccgaaga 10466098  T
Q  201 aggt 204  Q
    ||||    
T  10466099 aggt 10466102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 25771074 - 25770887
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| || ||||| |||||||| || ||||||||||||| |||  | |||  |   |||||||||||||||||  |||||||     
T  25771074 gagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaagaataatttatgtgaccgtgatgagaagaagtgttttcgatgtggg 25770975  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
      ||| || ||||   || | ||||||||||| |||||| |||| ||||| |||||| ||||||| ||||| || ||  |||||||||    
T  25770974 acgaaaggacacacattatctgattgcaagcgtggtgatattgtgtgctacaattgtgatgaagaaggtcatattagctctcagtgca 25770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16813870 - 16813805
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| |||||||||||| ||||| |  |||||||| |||||||||||||||||||| |||||    
T  16813870 gagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 16813805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 27559029 - 27559132
Alignment:
Q  10 tcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggt 109  Q
    ||||||||||||   |||||| || ||||| |||||||||||||||||||  |||||| |  |||| | ||||||||||||| | |||||  ||||||||    
T  27559029 tcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaagaagggt 27559128  T
Q  110 caca 113  Q
    ||||    
T  27559129 caca 27559132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 19456253 - 19456011
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||| ||||| ||||||| ||||| || |||||||| || ||||||||||||||||| || |||   |  |||||||||||||| ||||| ||  |     
T  19456253 gagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtggtgt 19456154  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||  ||||| ||||| || ||  |||| |||||||| || || || || ||||| || ||| |  |||| || || || ||||    
T  19456153 cagaaaggacacacactagatgattgtaagcgtggagacattgtttgctataactgcaacgaggaaggtcatattagttcgtagtgtactcaaccaaaga 19456054  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| ||||| |||||| |||||||||||||    
T  19456053 aggttaggaccggtggtaaagtgtttgctctgactggtacgca 19456011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 19466398 - 19466156
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||| ||||| ||||||| ||||| || |||||||| || ||||||||||||||||| || |||   |  |||||||||||||| ||||| ||  |     
T  19466398 gagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtggtgt 19466299  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||  ||||| ||||| || ||  |||| |||||||| || || || || ||||| || ||| |  |||| || || || ||||    
T  19466298 cagaaaggacacacactagatgattgtaagcgtggagacattgtttgctataactgcaacgaggaaggtcatattagttcgtagtgtactcaaccaaaga 19466199  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| ||||| |||||| |||||||||||||    
T  19466198 aggttaggaccggtggtaaagtgtttgctctgactggtacgca 19466156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8720756 - 8720821
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttg 66  Q
    |||||||| ||||| |||||| ||||| |  |||||||| |||||||||||||||||||| |||||    
T  8720756 gagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 8720821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 20010599 - 20010684
Alignment:
Q  47 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcg 132  Q
    |||||||||||||| | ||| ||| | ||||||||||| ||||||||||| || ||||||||||| ||| | || || ||||||||    
T  20010599 ggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcg 20010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 23081650 - 23081594
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||| |||||| ||||||| ||  ||||| ||||||||||||||||||||    
T  23081650 agatgctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaa 23081594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 21765038 - 21764976
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| || ||||||    
T  21765038 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 21764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25756670 - 25756720
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaag 55  Q
    ||||||||||| ||||| || |||||||| ||||| |||||||||||||||    
T  25756670 gatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaag 25756720  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 19486346 - 19486443
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||| |||| ||||||| ||||| |  |||||||| ||||| |||||||||||||| ||||| |     |||||||||||||| ||| |||||||    
T  19486346 agagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttccgatgtgg 19486443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 22437095 - 22437043
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||| |||||||||||| || || ||||| ||||| |||||||||||||||||    
T  22437095 gatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagag 22437043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 9009 - 8755
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||||     
T  9009 gagagatgctcctgatgagattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggt 8910  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| |||||  |||| ||||| || || || ||||| || || |||||| | |||||||| || |||||||    
T  8909 cagaaaggacacactctagctgattgcaagcgtggtgacattgtttgctacaactgcaacgaagaaggccatatcagttcgcagtgcactcaaccgaaga 8810  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    |||||||    ||||| ||||| ||||| |||||||||||||| ||| |||||||    
T  8809 aggttagtaccggtgggaaagtgtttgcattgactggtacgcatactactagtga 8755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 764 - 1001
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggac 101  Q
    |||||||||||||||||||| |||||||  ||||||||| |||||||||| |||||||| |||||||| || |||||||||||||| ||||| ||||| |    
T  764 agagatgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtc 863  T
Q  102 agaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaa 201  Q
    |||| || ||||  ||||| ||||||||||| |||||| |||| || ||||| || |||||||||||||| |||||| | ||||| || || |||| |||    
T  864 agaaaggacacactctagctgattgcaagcgtggtgatattgtttgttataactgcaatgaagagggtcatatcagttcacagtgtacgcaaccgaggaa 963  T
Q  202 ggttagagttggtggaaaagtttttgctttgactggta 239  Q
    |||||||   ||||| ||||| ||||||||||||||||    
T  964 ggttagaaccggtggtaaagtgtttgctttgactggta 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 54437 - 54200
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaa 105  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||| |||||    
T  54437 atgctcttgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaa 54338  T
Q  106 gggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggtt 205  Q
    ||| ||||  |||||  |||||||||| ||||||||||| || ||||| || |||||||||||||| |||||  | | ||||||||| ||||| ||||||    
T  54337 gggacacactctagcttattgcaagcgtggtgatgttgtttgttataactgcaatgaagagggtcatatcagctcacggtgcacacaaccgaaaaaggtt 54238  T
Q  206 agagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||     |||| ||||| |||||||| |||||||||||    
T  54237 aggaccagtggtaaagtgtttgctttcactggtacgca 54200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 1757 - 2007
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||| ||||||| ||| |||| | |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||     
T  1757 gagagatgctactgctgaaataatttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggt 1856  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   | ||  | |||||| | ||||||||||| || ||||||||| |||| ||||| ||||||||| | |||||||| ||||| ||||    
T  1857 cagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgatgaggagggccacatcagttcccagtgcactcagccaaaga 1956  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgcta 251  Q
    || |||||   ||||| ||||| |||||||||||| |||||||||||||||    
T  1957 agattagaaccggtgggaaagtgtttgctttgactagtacgcagactgcta 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 454 - 700
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||     
T  454 gagagatgctcctactgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggt 553  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   | ||  | |||||| |   ||||||||| || ||||||||| |||| ||||| ||||||||| | |||||||| ||||| ||||    
T  554 cagaaaggacacacattggctaactgcaagaggaatgatgttgtttgttataattgtgatgaggagggccacatcagttcacagtgcactcagccaaaga 653  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    || |||||   ||||| ||||| ||||| ||||||||||||||||||    
T  654 agattagaaccggtgggaaagtgtttgcgttgactggtacgcagact 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 164310 - 164564
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||     
T  164310 gagagacgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgttctaaggatgagaagaagtgtttcaggtgtggt 164409  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||  ||||||||||| ||| ||||||| || ||||| || |||||||| || || |||||| | || |  || ||||||||||    
T  164410 cagaaaggacacactttagttgattgcaagcgtggtaatgttgtttgttataactgcaatgaagaaggccatatcagttcgcattatactcagccgaaga 164509  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    ||||||||   ||||| ||||| ||||| ||||| |||||| ||||| |||||||    
T  164510 aggttagaaccggtgggaaagtgtttgcattgaccggtacgtagactactagtga 164564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 30487 - 30539
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  30487 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagag 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 65211 - 65453
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||||    
T  65211 gatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcaga 65310  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    | || |||| | | ||  |||| ||| | || |||||||| || ||||||||| |||| || || ||||||||| | |||||||| ||||| ||||||||    
T  65311 aaggacacacgttggctaattgtaagagaggagatgttgtttgttataattgtgatgaggaaggccacatcagttcacagtgcacccagccaaagaaggt 65410  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||    ||||||||||| | ||| ||||||||||||||||||    
T  65411 taggaccggtggaaaagtgtatgcattgactggtacgcagact 65453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 62681 - 62923
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || ||||  || |||||||| |||||||||||||||||||| || |||  | | |||||||||||||| || || |||||     
T  62681 gagagatgctcctactgatattgtttaattcaagtgtggtgagaaaggccacaagagtaatgtatgtgaccatgatgagaagaagtgctttaggtgtggt 62780  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| |  ||||   |||| ||||| ||||| || |||||||| | ||| || ||||||||| | ||||| |||||| | ||||| || ||||| ||||    
T  62781 cagaaagtacacactttagctgattgtaagcgtggggatgttgttttctacaactgtaatgaataaggtcatatcagttcgcagtgtacgcagcctaaga 62880  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    | |||||    ||||| ||||| ||||||||||||||||||||    
T  62881 aagttaggacaggtggcaaagtgtttgctttgactggtacgca 62923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 7433 - 7266
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||     
T  7433 gagagatgctcctgctgagattgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 7334  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagaggg 168  Q
    ||||| || ||||  ||||| ||||||||||| ||||||||||| || ||||| | | ||||||||||    
T  7333 cagaaaggacacactctagctgattgcaagcgtggtgatgttgtttgttataactatgatgaagaggg 7266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 1145 - 1246
Alignment:
Q  7 tgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaag 106  Q
    |||| ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1145 tgcttctgctgagatagtatgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaag 1244  T
Q  107 gg 108  Q
    ||    
T  1245 gg 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 15467 - 15279
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||||||  | || | |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||     
T  15467 gagagatgctcctgctgagattttctgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaggacgagaagaagtgcttcaggtgtggt 15368  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcac 189  Q
    |||||  | ||||  ||||| ||||||||||| ||||||||||| || ||||| || ||||||||||| || |||||| | ||||||||    
T  15367 cagaaatgacacactctagctgattgcaagcgtggtgatgttgtttgttataactgcaatgaagagggccatatcagttcacagtgcac 15279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 5118 - 5360
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| ||||| |  ||||||||||| ||||||||||||||||| || |||   ||||||||||||||||| ||||| |||||     
T  5118 gagagatgctcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtgataaggatgagaagaagtgcttcaggtgtggt 5217  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| ||||| |||||  | |||||||| |||||||| || ||||| ||||| || |||||| |  |||| ||| | |||||||    
T  5218 cagaagggacacactttagctgattgtaagcggagagatgttgtttgctataactgcaatgaggagggccatatcagttcatagtgtacataaccgaaga 5317  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||   ||||| ||||| |||||| |||||||||||||    
T  5318 aggttagaaccggtggtaaagtgtttgctctgactggtacgca 5360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 326102 - 325860
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| ||||| |  |||||||||||||||| |||||||||||| || |||   || |||||||||||||| ||||  |||||     
T  326102 gagagatgctcctgctgagattgtttgctacaagtgtggcgagaaagaccacaagagtaatgtctgtgataaagatgagaagaagtgcttcaagtgtggt 326003  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   ||||  |||| ||||| || |||||||| || ||||| || ||||||||||| || |||||| | ||||||||||| || ||||    
T  326002 cagaaaggacacacattagctaattgtaagcggggagatgttgtttgttataactgcaatgaagagggccatatcagttcacagtgcacacaaccaaaga 325903  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||   ||||| ||||| ||||||||||||||||||||    
T  325902 aggttagaaccggtggtaaagtgtttgctttgactggtacgca 325860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 319638 - 319534
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||| || |||   || |||||||||||||| ||||| |||||     
T  319638 gagagatgctcctgctgggattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtctgtgataaagatgagaagaagtgcttcaggtgtggt 319539  T
Q  101 cagaa 105  Q
    |||||    
T  319538 cagaa 319534  T

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Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 20832878 - 20833120
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| ||| || ||||| |  ||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||| |||||     
T  20832878 gagagatgctcctgttgatattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaattgtttcaggtgtggt 20832977  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||| | || |||||||| || ||||| || ||||| || |||||||||||| | ||||| || || |||| ||    
T  20832978 cagaaaggacacacactagctgattgcaagaggggagatgttgtttgttataactgcaatgaggaaggtcacatcagttcgcagtgtacgcaaccgagga 20833077  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||| | ||||| |||||| |||||||||||||    
T  20833078 aggttaggaccggtagtaaagtgtttgctctgactggtacgca 20833120  T

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Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 21961439 - 21961193
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   || ||||||| |||||| ||||| |||||     
T  21961439 gagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggt 21961340  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| || || ||||| || ||| |||| ||||| || || |||| ||||||||| |||||| | |||||| |  |||||||||    
T  21961339 cagaagggacacagtttagctgaatgtaagcgtggggatattgtctgctacaactgcaatggagagggtcatatcagttcgcagtgccctgagccgaaga 21961240  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||||||||| || ||||||||||||||||||||||||    
T  21961239 aggttagaactggtggaaaggtatttgctttgactggtacgcagact 21961193  T

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Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 24096593 - 24096839
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| |||||||| |||||||| || ||||||||||||||||| | ||||   |  ||||||| ||||||||| || |||||     
T  24096593 gagagatgctcctgttgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtggtagagatgagaggaagtgttttaggtgtggt 24096692  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| || || ||||| || ||  |||| ||||| || || || ||||| ||||| |||||| | ||||| || ||||||||||    
T  24096693 cagaaaggacacacactagctgaatgtaagcgtggggacattgtttgctacaactgcaacgaagaaggtcatatcagttcacagtgtactcagccgaaga 24096792  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| ||||   ||||| ||||| ||||| ||||||||||||||||||    
T  24096793 aggctagaaccggtgggaaagtgtttgcattgactggtacgcagact 24096839  T

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Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 20074687 - 20074933
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||  ||||||| || ||||  |||||||| ||||||||||||||||| || |||||||  || ||||||| |||||| ||||| |||||     
T  20074687 gagagatgctcccactgagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgtagtaaagatgagaggaagtgcttcaggtgtggt 20074786  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   | || || |||||||| || ||| |||| ||||| || || |||| ||||||||| |||| | | |||||  |  |||||||||    
T  20074787 cagaagggtcacagcttggctgaatgcaagcgtggggatattgtctgctacaactgcaatggagagggtcatatcaattcgcagtgtcctgagccgaaga 20074886  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || ||  | ||||| ||||||||||||||||||    
T  20074887 aggttagaactgggggcaagatgtttgcattgactggtacgcagact 20074933  T

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Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 38909804 - 38910050
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  38909804 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 38909903  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  38909904 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 38910003  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| |||||||| ||||||||||||||||||    
T  38910004 agactagaattggtggaaaggtttttgccttgactggtacgcagact 38910050  T

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Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 48426285 - 48426039
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  48426285 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 48426186  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  48426185 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 48426086  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || ||||||||||||||||||||||||    
T  48426085 agactagaattggtggaaaggtgtttgctttgactggtacgcagact 48426039  T

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Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 52989153 - 52988907
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   || ||||||| |||||||||||| |||||     
T  52989153 gagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggtgtggt 52989054  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || || ||||| || ||  |||| ||||| || || |||| ||||||||| |||||| | || ||  |  | |||||||    
T  52989053 cagaagggtcacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcatatcagttcacaatgtcctgaaccgaaga 52988954  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || || || ||||| ||||||||||||||||||    
T  52988953 aggttagaactgggggcaaggtgtttgcattgactggtacgcagact 52988907  T

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Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 20297795 - 20297664
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| |||||||  |||||||| |||||| ||||||||||||| ||||||   || ||||||| |||||| ||||| |||||     
T  20297795 gagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggt 20297696  T
Q  101 cagaagggtcacatgctagccgattgcaagcg 132  Q
     ||||||||||||  ||||| || ||||||||    
T  20297695 tagaagggtcacagcctagctgaatgcaagcg 20297664  T

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Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 21742530 - 21742772
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||  |||| || |||||||| |||||||||||||||||||| || ||| ||| | |||||||||||||| || || |||||    
T  21742530 gagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtatgtgaccga-gatgagaagaagtgctttaggtgtgg 21742628  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   | || ||||||||||| || |||||||| ||||| || |||||||| || || || || ||| | ||||| || ||||| |||    
T  21742629 tcagaaaggacacacattggctgattgcaagcgtggggatgttgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaag 21742728  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||    ||||| || || ||||| ||||||||||||||    
T  21742729 aaggttaggacaggtggcaaggtatttgcgttgactggtacgca 21742772  T

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Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 37680461 - 37680215
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||| |||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  37680461 gagagatactcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 37680362  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || ||||| |||| ||| ||||| || ||| | |||||  |  |||||| ||    
T  37680361 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagttcacagtgtcctgagccgagga 37680262  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| ||||||| || || ||||||||||||||||||||||||    
T  37680261 agactagaattggtgggaaggtgtttgctttgactggtacgcagact 37680215  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 31536975 - 31537221
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| || ||||||   |  ||||| |  || || ||||| |||||     
T  31536975 gagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtagagatgatagaaaatgcttcaggtgtggt 31537074  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || || || || ||| | |||||  |  |||||||||    
T  31537075 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggccatattagttcacagtgtcctgagccgaaga 31537174  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||||||||| || |||||| |||||||||||||||||    
T  31537175 agactagaattggtggaaaggtgtttgctctgactggtacgcagact 31537221  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21739014 - 21739220
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||| ||||||| |||||||  |||| || |||||||| |||||||||||||||||||| |||||| | | | |||||||||||||| || || |||||    
T  21739014 gagaggtgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtttgtgatcga-gatgagaagaagtgctttaggtgtgg 21739112  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   |||  ||||| ||||| || |||||| | ||||| || | ||||||||| ||||| |||||| | ||||| ||  |||| |||    
T  21739113 tcagaaaggacacaccttagttgattgtaagcgtggggatgttttttgctacaactataatgaagaaggtcatatcagttcgcagtgtacggagcctaag 21739212  T
Q  200 aaggttag 207  Q
    ||||||||    
T  21739213 aaggttag 21739220  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 21228538 - 21228600
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  21228538 gatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 21228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 22015723 - 22015965
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |  | || ||||| || |||||||| || |||||||| || ||||| ||||||   |  |||||||||||||| ||||| |||||     
T  22015723 gagagatgctcctacaaatattgtttgattcaagtgtggagaaaaaggccaaaaaagtaatgtttgtgatagagatgagaagaagtgcttcaggtgtggt 22015822  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||| ||||||||||| || |||||||| || ||||| || || || || | ||| || |||   ||||| || ||||||||||    
T  22015823 cagaaaggacacactttagctgattgcaagcgtggggatgttgtttgttataactgcaacgaggaagatcatattagtttgcagtgtacgcagccgaaga 22015922  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| || || ||||||||||||||||||||    
T  22015923 aggttaggacaggtggcaaggtgtttgctttgactggtacgca 22015965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 20853738 - 20853984
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||| ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||| | ||| ||| | ||||||||||| ||||||||||| ||     
T  20853738 gagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggt 20853837  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||||||||| ||| | || || |||||||| || ||| | || || | |||||||   || ||||| ||||| ||  | |||||||| || || ||||    
T  20853838 cagaagggtcatatgttggctgaatgcaagcgtggagatatcgtttgttttaattgtggcgatgagggccacattagctcgcagtgcacgcaacctaaga 20853937  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||| |||  | | || || ||||| |||||||||||||| ||||||    
T  20853938 aggtcagaacttgagggaaggttttcgctttgactggtacccagact 20853984  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 22435715 - 22435898
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||||||||||  |||| || | ||| || ||||| ||||||||||||||||| || |||||| |  |||| |  ||||| |||||| |||||||  |||    
T  22435715 gatgctcctgcgaagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtaaagaaatgtttccgatgtggcaaga 22435814  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
    ||||||| |   |||| ||||||||||   ||||| |||| ||||  ||||| || ||||||||||||||  || |||||||||    
T  22435815 agggtcatacattagctgattgcaagcatagtgatattgtgtgcttcaattgcaaggaagagggtcacattggttctcagtgca 22435898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 18273178 - 18273072
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggac 101  Q
    ||||||| |||| ||||||| |||||||  |||||||| ||||| |||||||||||||| ||||| |     || ||||||||||| ||| ||||||||     
T  18273178 agagatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttgcattggtgaggagaagaagtgcttccgatgtggaa 18273079  T
Q  102 agaaggg 108  Q
    |||||||    
T  18273078 agaaggg 18273072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 19857686 - 19857444
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||| || | ||||| ||||| || |||||||| || ||||||||||||||||| || |||   |  ||||||||||| || ||||| |||||     
T  19857686 gagagatgcttctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaaatgcttcaggtgtggt 19857587  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||| ||||| || ||  |||| || ||||| |  ||||| || ||||| || ||| | ||||| || || |||||||    
T  19857586 cagaaaggacacacactagctgattgtaagcggggagacattgtttgttataactacaatgaggaaggtcatattagttcgcagtgtactcaaccgaaga 19857487  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||      |||| ||||| |||||| |||||||||||||    
T  19857486 aggttatgaccagtggtaaagtgtttgctctgactggtacgca 19857444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 5835 - 5593
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||| |||| || |||||||| ||||||||||||||||||||||| ||| | | || ||||||||||||| || || |||||    
T  5835 gagagatgctcctactgagataatttgcttcaagtgtggtgagaaaggccacaagagtaacgtgtgtgatcgag-atgagaagaagtgctttaggtgtgg 5737  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   |||| ||||| ||||| || |||||||| ||||| |||||||||||||| ||||| |||||| | ||||| || || || |||    
T  5736 tcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctacaattgtaatgaagaaggtcatatcagttcgcagtgtacgcaacctaag 5637  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||    ||||| ||||| ||||| ||||||||||||||    
T  5636 aaggttaggacaggtggcaaagtgtttgcgttgactggtacgca 5593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 70503 - 70261
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||  |||| ||||||||||| |||||||||||||||||||| || ||| ||| | ||||||||||||||||||||||||||    
T  70503 gagagatgctcctactgagattatttgctttaagtgtggtgagaaaggccacaagagtaatgtgtgtgaccga-gatgagaagaagtgtttcagatgtgg 70405  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
    |||||| || ||||   | || ||||||||||| || ||| |||| ||||| || |||||||| || || || || ||| | ||||| || ||||| |||    
T  70404 acagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaag 70305  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||    ||||| || || ||||||||||||||||||||    
T  70304 aaggttaggacaggtggcaaggtgtttgctttgactggtacgca 70261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 1864 - 2103
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacag 103  Q
    ||||||||||||||| || ||||| |  |||||||| |||||||||||||||||||| ||||||   || |||||||||||||| ||||| ||||| |||    
T  1864 agatgctcctgctgaaattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcag 1963  T
Q  104 aagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaagg 203  Q
    || || ||||   |||| ||||| ||||| || || ||||| |||||||| || ||||| || ||||| |||||| | ||||| ||||| ||||||||||    
T  1964 aaaggacacacattagctgattgtaagcggggagacgttgtttgctataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaagaagg 2063  T
Q  204 ttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||    ||||| ||||| |||||| |||||||||||||    
T  2064 ttaggaccggtggtaaagtgtttgctctgactggtacgca 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 70767 - 70521
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||  | |||||||  |||||||| | ||||||||||||| |||| || || ||||| ||||||||||||||||||||||| ||     
T  70767 gagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagggtaatgtctgcaccaaagatgagaagaagtgtttcagatgcggt 70668  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    || || |||||  || | || || |||||||| || ||| |||| || ||||| |||||||| ||||| ||||| ||| | |||||||| || || ||||    
T  70667 cataaaggtcatgtgttggctgaatgcaagcgtggagatattgtttgttataactgtaatgaggagggccacattagttcacagtgcacgcaacctaaga 70568  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||| |||  ||| |||||||| |||| |||||||||||||||||||    
T  70567 aggtcagaactggaggaaaagtatttgttttgactggtacgcagact 70521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11815 - 11952
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||     
T  11815 gagagatgctcctactgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 11914  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtga 138  Q
    ||||| || ||||  ||||| ||||||||||| |||||    
T  11915 cagaaaggacacactctagctgattgcaagcgtggtga 11952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 39242 - 39484
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   || |||||||||||||| ||||| |||||     
T  39242 gagagatgctcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggt 39341  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   ||||  |||| ||||| || |||||||| |||||||| || ||||| || ||||  |||||| | ||||| |||||  ||||||    
T  39342 cagaaaggacacacattagctaattgtaagcggggagatgttgtttgctataactgcaatgaggaaggtcgtatcagttcgcagtgtacacaatcgaaga 39441  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| ||||| |||||| |||||||||||||    
T  39442 aggttaggaccggtggtaaagtgtttgctctgactggtacgca 39484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 14815 - 14753
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||| ||||||    
T  14815 gatgctcctgcggagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgtttgt 14753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 180753 - 180951
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaa 105  Q
    ||||||||| |||| | |||||||  || ||||| | ||| |||||||||||||| | ||| ||  | ||||||||||| ||||||||||| || |||||    
T  180753 atgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 180852  T
Q  106 gggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    ||||||  || | || ||||||||||| || ||| |||| || | ||| |||  ||| ||||||||||| ||| | |||||||| || || ||||||||    
T  180853 gggtcatgtgttggctgattgcaagcgtggagatattgtttgttttaactgtggtgatgagggtcacattagttcgcagtgcactcaacctaagaaggt 180951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 5576 - 5334
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||| || |||||||| |||||||| || ||||||||||||||||| |||||| ||| || ||||||||||||| ||||| |||||    
T  5576 gagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgag-atgagaagaagtgcttcaggtgtgg 5478  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   |||| ||||| ||||| || |||||||| ||||| || ||||||||||| ||||| |||||| | ||||| || ||||| |||    
T  5477 tcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaag 5378  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||  |||    ||||| || |||||||| ||||||||||||||    
T  5377 aagtctaggtcaggtggcaaggtttttgcgttgactggtacgca 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 243
Target Start/End: Complemental strand, 37303 - 37092
Alignment:
Q  32 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagc 131  Q
    ||||||||||||||||||||||||||||| ||||||   || |||||||||||||| ||||| ||||| |||||||| ||||  ||||| ||||| |||     
T  37303 aagtgtggcgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagt 37204  T
Q  132 gcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgcttt 231  Q
    | || ||| |||| |||||||| || ||||| || ||||| |||||| | ||||| || |||||||||||||||||   |||||| || || ||| ||||    
T  37203 gtggggatattgtttgctataactgcaatgaggaaggtcatatcagttcacagtgtacgcagccgaagaaggttaggactggtggtaaggtgttttcttt 37104  T
Q  232 gactggtacgca 243  Q
    ||| ||||||||    
T  37103 gaccggtacgca 37092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 3026 - 2784
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  ||||||||  ||||||||||||||||||| ||||||   || |||||||||||||  ||||| ||||||    
T  3026 gagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagttcttcaggtgtgga 2927  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| ||||| ||||| || ||  | || |||||||| || ||||| ||||| || |||||| | |||||  |||| |||||||    
T  2926 cagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatcagttcacagtgtgcacaaccgaaga 2827  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||   ||||| ||||| |||||| |||||||||||||    
T  2826 aggttagaaccggtggtaaagtgtttgctctgactggtacgca 2784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 1516 - 1762
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| |||||||| ||||||||||| ||||||   || ||||||| |||||| ||||| |||||     
T  1516 gagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggacacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggt 1615  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   |||| || |||||||| || ||  || | ||||| || || |||| ||||||||| |||||| | |||||  |  | |||||||    
T  1616 cagaagggacacagtttagctgaatgcaagcgtggggacattatctgctacaactgcaatggagagggtcatatcagttcacagtgtcccgaaccgaaga 1715  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || ||||| ||||| ||||||||||||||||||    
T  1716 aggttagaactgggggcaaagtgtttgcattgactggtacgcagact 1762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 9681 - 9923
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||||||| || ||||| |  |||||||| ||||| |||||||||||||| || |||   ||||||||||||||||| ||||| |||||     
T  9681 gagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgtgataaggatgagaagaagtgcttcaggtgtggt 9780  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||  ||||| ||||| || |||||||| |||||||| || ||||| ||||| || || ||| | || || || || |||||||    
T  9781 cagaaaggacacaccctagttgattgtaagcggggagatgttgtttgctataactgcaatgaggagggccatataagttcacaatgtacgcaaccgaaga 9880  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   |||||| || || |||||| |||||||||||||    
T  9881 aggttaggactggtggtaaggtgtttgctctgactggtacgca 9923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 50500 - 50258
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||| || |||||||| |||||||| || |||| |||||||||||| |||||| ||| | |||||||||||||||||||| |||||    
T  50500 gagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaagaccacaagagtaatgtttgtgaccga-gatgagaagaagtgtttcaggtgtgg 50402  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   |||| ||||| ||||| || ||| |||| ||||| || || ||||| || ||||| |||||| |  |||| || ||||| |||    
T  50401 tcagaaaggacacaccttagctgattgtaagcgtggggatattgtttgctacaactgcaatgaggaaggtcatatcagttcgtagtgtacccagcctaag 50302  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||    ||||| || || ||||||||||||||||||||    
T  50301 aaggttaggacaggtggcaaggtgtttgctttgactggtacgca 50258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 63428 - 63670
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||| || |||||||| |||||||| || ||||||||||||||||| |||||| ||| | |||||||||||||||||||| |||||    
T  63428 gagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgtttcaggtgtgg 63526  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   |||| ||||| ||||  || ||| |||| ||||| || | |||||| || ||||| |||||| | ||||| || ||||| |||    
T  63527 tcagaaaggacacactttagctgattgtaagcatggggatattgtttgctacaactataatgaggaaggtcatatcagttcgcagtgtacgcagcctaag 63626  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||     |||| || || ||||||||||||||||||||    
T  63627 aaggttaggacaagtggcaaggtgtttgctttgactggtacgca 63670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 1220 - 1474
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||||||| | ||||   |  |||||||||||||| ||||| |||||     
T  1220 gagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggt 1319  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||| || || ||||| || ||| |||| ||||| | ||| ||||| || ||||| |||||| | ||||| || ||||| ||||    
T  1320 cagaaaggacacactttagctgaatgtaagcgtggggatattgtttgctacacttgcaatgaggaaggtcatatcagttcgcagtgtactcagcctaaga 1419  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    |||||||    ||||| ||||| || || |||||||| | ||||||| |||||||    
T  1420 aggttaggacaggtggtaaagtgttcgcgttgactggcatgcagactactagtga 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 8139 - 7885
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||||||| | ||||   |  |||||||||||||| ||||| |||||     
T  8139 gagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggt 8040  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   |||| || || ||||| || ||| |||| ||||| | ||| ||||| || ||||| |||||| | ||||| || ||||| ||||    
T  8039 cagaaaggacacactttagctgaatgtaagcgtggggatattgtttgctacacttgcaatgaggaaggtcatatcagttcgcagtgtactcagcctaaga 7940  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagactgctagtga 255  Q
    |||||||    ||||| ||||| || || |||||||| | ||||||| |||||||    
T  7939 aggttaggacaggtggtaaagtgttcgcgttgactggcatgcagactactagtga 7885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 8930 - 9172
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||| ||||| |||| ||||| |  |||||||| |||||| ||||||||||||| || |||   ||||||||||||||||| ||||| |||||     
T  8930 gagagatgcttctgctaagattgtttgctacaagtgtggtgagaaaagccacaagagtaatgtctgtgataaggatgagaagaagtgcttcaggtgtggt 9029  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||   ||||  |||| ||||| || |||||||| |||||||| || ||||| || ||||| |||| | | ||||| |||||  ||||||    
T  9030 cagaaaggacacacattagctaattgtaagcggggagatgttgtttgctataactgcaatgaggaaggtcaaatcaattcgcagtgtacacaaacgaaga 9129  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| || || |||||| |||||||||||||    
T  9130 aggttaggaccggtggtaatgtgtttgctctgactggtacgca 9172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 5448 - 5206
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||||| |||||| || |||   || |||||||||||||| ||||| |||||     
T  5448 gagagatgctcctgctgagattgtttgctacaagtgcggcgagaaaggccacaggagtaatgtctgtgataaagatgagaagaagtgcttcaggtgtggt 5349  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     |||| || ||||   ||||  |||| ||||| || || ||||| || ||||| || ||||| || ||||| |||||| | ||||| || || |||||||    
T  5348 tagaaaggacacacattagctaattgtaagcggggagacgttgtttgttataactgcaatgaggaaggtcatatcagttcgcagtgtactcaaccgaaga 5249  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    ||||| ||||| |||||| |||||||||||||    
T  5248 aggttaggaccggtggtaaagtgtttgctctgactggtacgca 5206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 792 - 1034
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| | ||||| ||||| || |||||||| || ||||||||||||||||||||||||   |  |||||||||||||| ||||| |||||     
T  792 gagagatgctcctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggt 891  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| ||  |||  ||||| ||||| ||||| || ||  |||| |  ||||| || ||||| || ||||| |||||| | ||||| || || |||||||    
T  892 cagaaaggatacactctagctgattgtaagcgtggggacattgtttattataactgcaatgaggaaggtcatatcagttcgcagtgtacgcaaccgaaga 991  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   |||||| || || ||||||||||| ||||||||    
T  992 aggttaggactggtggtaaggtgtttgctttgaccggtacgca 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 42130 - 41884
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| |||||     
T  42130 gagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggt 42031  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || |||||||| || ||  |||| || || || || ||||  || ||||| |||||| | |||||  |  |||||||||    
T  42030 cagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtgtcctgagccgaaga 41931  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||  |||| |||| ||||| || ||||||||||||||||||||||||    
T  41930 agactagaattgggggaaaggtgtttgctttgactggtacgcagact 41884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 5966 - 5824
Alignment:
Q  32 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagc 131  Q
    |||||||| |||||||||||||||||||| || |||      ||| |||||||||||||||||||||||||||| || ||||   |||| ||||||||||    
T  5966 aagtgtggtgagaaaggccacaagagtaatgtgtgtgattgagataagaagaagtgtttcagatgtggacagaaaggacacacattagctgattgcaagc 5867  T
Q  132 gcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    | || |||||||| || ||||||||| |||||||||| |||||    
T  5866 gtggggatgttgtttgttataattgtgatgaagagggacacat 5824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29922 - 29752
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||  ||||||||| | ||| |||||||| || || |||||||||||||| ||||||| | | |||||||||||||||||| | |||||     
T  29922 gagagatgctcctattgagatagtctatttcaagtgtggtgaaaagggccacaagagtaatgtttgtaaccatgatgagaagaagtgtttccggtgtggg 29823  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
      ||| || ||||   |||| || |||||||| ||||||||||| ||||| |||||| ||||||| |||||    
T  29822 acgaaaggacacacaatagctgagtgcaagcgtggtgatgttgtttgctacaattgtgatgaagaaggtca 29752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 856 - 610
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || ||||||   || ||||||| |||||| ||||| || ||     
T  856 gagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgcttcaggtgcggt 757  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||||||||   |||| || || ||||| || ||  |||| ||||| || || |||| ||||||||| || ||| | |||||  |  | |||||||    
T  756 cagaagggtcacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcatataagttcacagtgtcctgaaccgaaga 657  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || || || ||||| ||||||||||||||||||    
T  656 aggttagaactgggggcaaggtgtttgcattgactggtacgcagact 610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 34732 - 34490
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || |||||||| |||||||| |||||||||||||||||||| || |||   |  |||||||||||||| ||||| |||||     
T  34732 gagagatgctcctactgacattgtttgtttcaagtgtggtgagaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggt 34633  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     |||| || ||||   |||  ||||| ||||| || || ||||| || ||||| || ||||| || ||||| || ||| |  |||| || ||||||||||    
T  34632 tagaaaggacacacattagttgattgtaagcgtggggacgttgtttgttataactgcaatgaggaaggtcatattagttcgtagtgtacgcagccgaaga 34533  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||    |||||||| || ||||| ||||||||||||||    
T  34532 aggttaggacaggtggaaaggtgtttgccttgactggtacgca 34490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 43328 - 43570
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    |||||||||||||  |||||| || ||||| |||||| | || || |||||||||||||| || ||| | | || ||||||||||||| || || |||||    
T  43328 gagagatgctcctaatgagattgtctgtttcaagtgtcgtgaaaagggccacaagagtaatgtgtgtgatcgag-atgagaagaagtgctttaggtgtgg 43426  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
    |||||| || ||||   |||| ||||| ||||| || |||||||| |||||||||||| ||||||||||||| || ||  | |||||||   |||| |||    
T  43427 acagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctataattgtgatgaagagggtcatattagctcgcagtgcaagaagcccaag 43526  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||| |    ||||| || || ||||||||||||||||||||    
T  43527 aaggttcggacaggtggcaaggtgtttgctttgactggtacgca 43570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 43093 - 42923
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||| ||||||| |||||| | |||||||||||||||||||| |||||| ||| | |||||||||||||| || || ||| |    
T  43093 gagagatgctcctactgagataatttgtttcaagtgttgtgagaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgctttaggtgtag 42995  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
     ||||| || ||||   |||| ||||  ||||| || |||||||| ||||| |||||||||| ||| |||||    
T  42994 tcagaaaggacacactttagcggattttaagcgtggggatgttgtttgctacaattgtaatgcagaaggtca 42923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 2113 - 1949
Alignment:
Q  3 gagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtggac 101  Q
    ||||||||||| |||| ||  |||| || |||||||| |||||||||||||||||||| || ||| ||| | |||||||||||||| || || |||||||    
T  2113 gagatgctcctactgaaattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgaccga-gatgagaagaagtgctttaggtgtggac 2015  T
Q  102 agaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagaggg 168  Q
    |||| || || |   |||| ||||| ||||| || ||||||||||||||||||||| ||||||||||    
T  2014 agaaaggacatactttagctgattgtaagcgtgg-gatgttgtatgctataattgtgatgaagaggg 1949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 724 - 966
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| | || || | ||| || |||||||| || ||||||||||||||||| ||||||   |  |||||||||||||| ||||| |||||     
T  724 gagagatgctcctacggacattgattgcttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagtgcttcaggtgtggt 823  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||  ||||| ||||| ||||| || ||  |||| || ||||| || || || || || || |||||| | ||||| || ||||| ||||    
T  824 cagaagggacacacactagctgattgtaagcgtggggacattgtttgttataactgcaacgaggaaggacatatcagttcgcagtgtacgcagccaaaga 923  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    |||||||   |||||| || || ||||||||||| ||||||||    
T  924 aggttaggactggtggtaaggtgtttgctttgaccggtacgca 966  T

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Target: scaffold0310 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 11372 - 11126
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| || |||||||||||||| || | ||||   |  ||||||| |||||| ||||| |||||     
T  11372 gagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaagtgcttcaggtgtggt 11273  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| |||   ||||| || || ||||| || ||  |||| ||||| || || |||||||||||||| |||||  | ||||| || ||||||||||    
T  11272 cagaagggacacgcactagctgaatgtaagcgtggggacattgtctgctacaactgcaatgaagagggtcatatcagctcacagtgtactcagccgaaga 11173  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||| |||    || || || || ||||| ||||||||||||||||||    
T  11172 aggctaggaccggagggaaggtgtttgcgttgactggtacgcagact 11126  T

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Target: scaffold0079 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 36889 - 36723
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| || |||||| |  |||| | |||||| |||||| | |||||  |||    
T  36889 gatgctcctgcggagatcgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtgaagaaatgtttccggtgtggcaaga 36790  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtca 171  Q
    ||||||| | | |||| |||||||||||  ||||| |||| |||| |||||| || |||||||||||    
T  36789 agggtcatacgttagctgattgcaagcgtagtgatattgtgtgctttaattgcaaggaagagggtca 36723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 514262 - 514508
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||||||| ||||||||||||||||| || ||||||   || || |||| |||||| ||||| |||||     
T  514262 gagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaaagacgagaggaagtgcttcaggtgtggt 514361  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    |||||||| ||||   || | || || ||| | || ||  |||| ||||| || || |||| ||||||||| |||||| | |||||  |  | |||||||    
T  514362 cagaagggacacagcttaactgaatgtaagtgtggggacattgtctgctacaactgcaatggagagggtcatatcagttcacagtgtcctgaaccgaaga 514461  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||||||  ||| || || || ||||| ||||||||||||||||||    
T  514462 aggttagaactgggggcaaggtgtttgcattgactggtacgcagact 514508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 781 - 1028
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||   || || ||||| || |||||||| || ||||||||||||||||| || |||   |  |||||||||||||| ||||  |||||     
T  781 gagagatgctcctatggatattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcatgtgtggt 880  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtact-----cagtgcacacagcc 195  Q
    ||||| || ||||  ||||| ||||| ||||| |||||  |||| |||||||| || || || || |||||||||||| |      ||||| ||||| ||    
T  881 cagaaaggacacacactagctgattgtaagcgtggtgacattgtttgctataactgcaacgaggaaggtcacatcagttcagttcgcagtgtacacaacc 980  T
Q  196 gaagaaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||||||||   |||||| || || ||||||||||||||||||||    
T  981 gaagaaggttaggactggtggtaaggtgtttgctttgactggtacgca 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 30325 - 30083
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||| | || |||| |||||||  |||||||| |||||||||||||| || |||||||||   |  ||||||| |||||| ||||| ||||| ||||    
T  30325 gatgctctttctaagattgtttgttacaagtgtggtgagaaaggccacaaaagcaacgtttgtggtagagatgagaggaagtgattcaggtgtggtcaga 30226  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggt 204  Q
    |  | ||||  ||||| || || ||||| || ||  |||| || || || || |||| ||||||||| |||||| | |||||  |  |||||||||||||    
T  30225 aaagacacaacctagctgaatgtaagcgtggggacattgtctgttacaactgcaatggagagggtcatatcagttcgcagtgtcctgagccgaagaaggt 30126  T
Q  205 tagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    ||||  ||||||||| || ||||| |||| |||||||||||||    
T  30125 tagaaatggtggaaaggtgtttgcattgattggtacgcagact 30083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 6200 - 5994
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||| | |||| || ||||| || |||||||| || ||||||||||||||||| || |||   |  |||||||||||||| |||||||||||     
T  6200 gagagatgctcttactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcagatgtggt 6101  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    ||||| || ||||  ||||| ||||||||||| || ||  |||| || ||||| || || || || || || || ||| | ||||| ||||| |||||||    
T  6100 cagaaaggacacacactagctgattgcaagcgtggggacattgtttgttataactgcaacgaggaaggacatattagttcacagtgtacacaaccgaaga 6001  T
Q  201 aggttag 207  Q
    |||||||    
T  6000 aggttag 5994  T

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Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 194 - 435
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggac 101  Q
    ||||| |||||| |||| || ||||| || ||||||||||||||||||||||||||||| || |||   |  |||||||||||||| ||||  ||||| |    
T  194 agagaggctcctactgatattgtttgcttcaagtgtggcgagaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcatgtgtggtc 293  T
Q  102 agaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaa 201  Q
    ||||  | ||||  ||||| ||||| ||||| || ||  |||| || ||||| || ||||| || ||||| || ||| | || || || || ||||||||    
T  294 agaaaagacacacactagctgattgtaagcgtggggacattgtttgttataactgcaatgaggaaggtcatattagttcgcaatgtacgcaaccgaagaa 393  T
Q  202 ggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||||    ||||| || || ||||||||||||||||||||    
T  394 ggttaggaccggtggcaaggtgtttgctttgactggtacgca 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 52046 - 51802
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||  | ||||| |||||||| |||||||||||||||||||| || ||| | | | |||||||||||||| || || |||||    
T  52046 gagagatgctcctactgagattatctgtttcaagtgtggtgagaaaggccacaagagtaatgtatgtgatcga-gatgagaagaagtgctttaggtgtgg 51948  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
      |||| || ||||   ||||  |||||||||  ||||||||||| | |||||| ||| ||||||| ||| | || ||| | ||||| || ||||| |||    
T  51947 taagaaaggacacactttagcttattgcaagcatggtgatgttgttttctataactgtgatgaagaaggtaatattagttcacagtgtacgcagccaaag 51848  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgcaga 245  Q
    |||||| |    ||||| || || ||| ||||||||||||||||||    
T  51847 aaggttcggacaggtggcaaggtgtttactttgactggtacgcaga 51802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 712 - 955
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| ||||||| |||||||  |||| ||| ||||||||||||||||| || ||||||   || || |||| |||||| ||||| |||||     
T  712 gagagatgctccttctgagattgtttgttacaagtttggtgagaaaggccacaagagcaatgtttgtggtaaagacgagaggaagtgcttcaggtgtggt 811  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    || ||||| ||||   |||| || || ||||| || ||  |||| |||||||| || |||| ||||||||| || ||| | |||||  |  | |||||||    
T  812 caaaagggacacagtttagctgaatgtaagcgtggggacattgtctgctataactgaaatggagagggtcatattagttcgcagtgtcctgaaccgaaga 911  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcag 244  Q
    ||||||||  | | || || || ||||| |||||||||||||||    
T  912 aggttagaactaggggcaaggtgtttgcattgactggtacgcag 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1181 - 1368
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| || |||| || |||||||| ||||| || |||||||||||| |||| || |||  |   |||||||||||||||||| |||||||     
T  1181 gagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtggg 1280  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
     |||| || ||||   | || || || ||||| |||||| |||| ||||| |||||| ||||||||||||| || ||  |||||||||    
T  1281 aagaaaggacacacattggctgagtgtaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatattagctctcagtgca 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 17032 - 16826
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||  ||||||| |||||||| |||||||||||||||||||| || ||| | | | |||||||||||||| || || |||||    
T  17032 gagagatgctcctactgagattatttgtttcaagtgtggagagaaaggccacaagagtaatgtgtgtgatcga-gatgagaagaagtgctttaggtgtgg 16934  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   | || ||||||||||| || ||| |||| ||||| || |||||||| || || || || ||| | ||||| || ||| | |||    
T  16933 tcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagactaag 16834  T
Q  200 aaggttag 207  Q
    ||||||||    
T  16833 aaggttag 16826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 28194 - 28381
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| || |||| || |||||||| ||||| || |||||||||||| |||| || |||  |   |||||||||||||||||| |||||||     
T  28194 gagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtggg 28293  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
     |||| || ||||   | || || || ||||| |||||| |||| ||||| |||||| ||||||||||||| || ||  |||||||||    
T  28294 aagaaaggacacacattggctgagtgtaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatattagctctcagtgca 28381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4362 - 4501
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| |||| || ||||| || |||||||||||||||||||| |||||||| ||||||   |  ||||||||||| || ||||| |||||     
T  4362 gagagatgctcctactgatattgtttgcttcaagtgtggcgagaaaggccaaaagagtaatgtttgtgatagagatgagaagaaatgcttcaggtgtggt 4461  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatg 140  Q
    ||||| || ||||   |||| ||||| ||||| |||||||    
T  4462 cagaaaggacacacattagctgattgtaagcgtggtgatg 4501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 16979 - 17087
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||| ||||||||||||   |||||| || ||||| ||||||||||||||||| |  |||||| |  |||| | |||||| |||||| | |||||  |||    
T  16979 gatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagcactgtttgtccagaggaggtgaagaaatgtttctggtgtggcaaga 17078  T
Q  105 agggtcaca 113  Q
    |||||||||    
T  17079 agggtcaca 17087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1213 - 1279
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||| || ||||||    
T  1213 gagagatgctcctgctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgt 1279  T

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Target: scaffold1530 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 899 - 801
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||||||||||| ||||| |  ||||||||| ||||||||||||||||||| || |||   || |||||||||||||  ||||| |||||    
T  899 gagagatgctcctgctgagattgtttgctacaagtgtggctagaaaggccacaagagtaatgtctgtgataaagatgagaagaagtacttcaggtgtgg 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 797 - 736
Alignment:
Q  182 cagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgca 243  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| |||||| |||||||||||||    
T  797 cagtgtacacaaccgaagaaggttaggatcggtggtaaagtgtttgctctgactggtacgca 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 1396 - 1642
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||||||||||| || ||||  |||||||| || |||||||||||||| || | ||||   |  |||| || ||| ||||| || |||||     
T  1396 gagagatgctcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgtgaggaaatgttttaggtgtggt 1495  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
     ||||||| ||||  ||||| || || ||| | || ||  |||| ||||| || || |||||||| ||||| |||||| | ||||| || ||||||||||    
T  1496 tagaagggacacaccctagctgaatgtaagtgtggggacattgtttgctacaactgcaatgaagaaggtcatatcagttcgcagtgtactcagccgaaga 1595  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||| ||    || || ||||| ||||| ||||||||||||||||||    
T  1596 aggtcaggaccggagggaaagtgtttgcattgactggtacgcagact 1642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4213 - 4458
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 99  Q
    ||||||||||||| |||||||  |||| || |||||||| ||||||| | |||| ||||| || ||| | | || ||||||||||||| || || |||||    
T  4213 gagagatgctcctactgagattatttgcttcaagtgtggtgagaaagactacaaaagtaatgtgtgtgatcgag-atgagaagaagtgctttaggtgtgg 4311  T
Q  100 acagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaag 199  Q
     ||||| || ||||   | || ||||||||||| || ||| |||| ||||| || |||||||| || || || || ||| | ||||| || ||||| |||    
T  4312 tcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaag 4411  T
Q  200 aaggttagagttggtggaaaagtttttgctttgactggtacgcagac 246  Q
    ||||||||    ||||| || || |||||||||||||||||||||||    
T  4412 aaggttaggacaggtggcaaggtgtttgctttgactggtacgcagac 4458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 12282 - 12108
Alignment:
Q  74 gatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcaca 173  Q
    |||||||||||||||||||||||||||||||| || ||||   | || ||||||||| | || ||| |||| ||||| || ||||||||||| || || |    
T  12282 gatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagtgtggggatattgtttgctacaactgtaatgaagaaggacata 12183  T
Q  174 tcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgcagactg 248  Q
    | ||| | ||||| || ||||| ||||||||| |    ||||| || || ||||| |||||||||||||| ||||    
T  12182 ttagttcacagtgtacgcagcctaagaaggttcggacaggtggcaaggtatttgcgttgactggtacgcaaactg 12108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 67017 - 67263
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||| | ||||| ||||||| ||||||||| || |||||||||||||| || ||||||   |   |||||| ||| |||||||| |||||     
T  67017 gagagatgctccttccgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtagacatgagaggaaatgtttcaggtgtggt 67116  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaaga 200  Q
    || ||||| ||||  ||||| || || ||||  || ||  |||| ||||| || || |||| ||| ||||| || ||| | || || |   |||||||||    
T  67117 caaaagggacacaacctagctgaatgtaagcttggggacattgtctgctacaactgcaatggagaaggtcatattagttcgcaatgtagtgagccgaaga 67216  T
Q  201 aggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
     |||||||  |||||||||||| ||||| |||||||||| |||||||    
T  67217 gggttagaactggtggaaaagtgtttgcattgactggtatgcagact 67263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 207
Target Start/End: Complemental strand, 13081 - 12916
Alignment:
Q  42 agaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgt 141  Q
    ||||||||||||||||||| || |||  |   || ||||||||||| || || ||||| ||||| || ||||   |||| ||||| ||||| || |||||    
T  13081 agaaaggccacaagagtaatgtatgtgaccgtgacgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgt 12982  T
Q  142 tgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttag 207  Q
    ||| ||||| || ||||||||||| ||||| |||||| | ||||| || ||||| |||||||||||    
T  12981 tgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaagaaggttag 12916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23832 - 23944
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||||||| || |||   |  ||||| | |||||| ||||| |||||     
T  23832 gagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatgtatgtggaagagatgataggaagtgcttcaggtgtggt 23931  T
Q  101 cagaagggtcaca 113  Q
    |||||||||||||    
T  23932 cagaagggtcaca 23944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32270 - 32218
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  32270 gatgctcctgctgagattgtctgttttaattgtggcgagaaaggccacaagag 32218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 10152 - 10214
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| || || |||||||| || | ||||| |||||||||||||||||| ||||||    
T  10152 gatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgt 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 12807 - 12869
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| || || |||||||| || | ||||| |||||||||||||||||| ||||||    
T  12807 gatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgt 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 30238 - 30480
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacag 103  Q
    |||||||||||||||||| ||||||| ||||||||| || |||||||||||||| || | ||||   |  ||| ||| ||| ||||| || |||||  ||    
T  30238 agatgctcctgctgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagataagaggaaatgttttaggtgtggtaag 30337  T
Q  104 aagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaagg 203  Q
    || || ||||  ||||| || || |||   || ||  |||||||||| || || || ||||| ||||| |||||| |  |||| || |||||||||||||    
T  30338 aaaggacacaaactagctgaatgtaagaatggggacattgtatgctacaactgcaaagaagaaggtcatatcagttcgaagtgtactcagccgaagaagg 30437  T
Q  204 ttagagttggtggaaaagtttttgctttgactggtacgcagac 246  Q
     |||    ||||| ||||| ||||| |||||||||||||||||    
T  30438 ctaggaccggtgggaaagtgtttgcattgactggtacgcagac 30480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 270 - 101
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| || || |||||||| || ||||||| |||||||||||||||||| |||||| |  | ||    ||||| ||| || | |||||  |||    
T  270 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatcaagaaatgtgtctggtgtggtaaga 171  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    ||||||| ||  |||| |||||||||||   |||| |||| ||||  || ||||||||||||||||||||    
T  170 agggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacat 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 13037 - 13206
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| || || |||||||| || ||||||| |||||||||||||||||| |||||| |  | ||    ||||| ||| || | |||||  |||    
T  13037 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatcaagaaatgtgtctggtgtggtaaga 13136  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    ||||||| ||  |||| |||||||||||   |||| |||| ||||  || ||||||||||||||||||||    
T  13137 agggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacat 13206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 1330 - 1186
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    |||| |||| ||||||| |||||||  |||||||| ||||| |||||||||||||| ||||| |     || ||||||||||| ||| |||||||| |||    
T  1330 gatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaaga 1231  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgct 149  Q
    |||| || | | |||| || |||||||| |||||| |||| ||||    
T  1230 aggggcatacgatagctgaatgcaagcgtggtgatattgtttgct 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 431 - 379
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||| |||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  431 gatgttcctgctgagattgtttgttttaattgtggtgagaaaggccacaagag 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 451 - 555
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    |||||||||||||   || || |||||||| ||||||||||||||||||||||| ||||  ||||||   |  |||||||||||||| ||||| |||||     
T  451 gagagatgctcctatagatattgtttgtttcaagtgtggcgagaaaggccacaaaagtagtgtttgtgatacagatgagaagaagtgcttcaggtgtggt 550  T
Q  101 cagaa 105  Q
    |||||    
T  551 cagaa 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 19016 - 19120
Alignment:
Q  139 tgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggt 238  Q
    |||| |||||||||| || ||||| || ||||| |||||| | ||||| ||||| ||||||||||||||    ||||| ||||| |||||| ||||||||    
T  19016 tgttatatgctataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaagaaggttaggaccggtggtaaagtgtttgctctgactggt 19115  T
Q  239 acgca 243  Q
    |||||    
T  19116 acgca 19120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 36733 - 36785
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||| |||||    
T  36733 gatgctcctgctgagattgtctgttttaattgtggcgagaaaggccataagag 36785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 504 - 453
Alignment:
Q  6 atgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  504 atgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagag 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 21995 - 21944
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaaga 56  Q
    ||||||||||||||||| || |||||||| ||||| ||||||||||||||||    
T  21995 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaaga 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 37419 - 37368
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaaga 56  Q
    ||||||||||||||||| || |||||||| ||||| ||||||||||||||||    
T  37419 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaaga 37368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 393 - 455
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| | ||||| |||||||| || ||||||||||||||||||||||| || ||||||    
T  393 gatgctcctacggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 13945 - 14007
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| || |||||||| ||||| ||||||||||||||||| || ||||||    
T  13945 gatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 14007  T

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Target: scaffold0285 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 5389 - 5327
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| || ||||||||||| ||||| |||||||| ||||||    
T  5389 gatgctcctgcggagattgtttgtttcaactgtggcgagaagggccataagagtaatgtttgt 5327  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 17551 - 17489
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| || ||||| || ||||| |||||||||||||||||||| ||||||    
T  17551 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgt 17489  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 229765 - 229827
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| || ||||||    
T  229765 gatgctcctgcggagattgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 229827  T

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Target: scaffold0443 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 12161 - 12080
Alignment:
Q  32 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcaca 113  Q
    |||||||| |||||||||||||||||||| ||||||   |  ||||| | |||||| ||||| ||||| |||||||||||||    
T  12161 aagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcaca 12080  T

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Target: scaffold0443; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 12013 - 11958
Alignment:
Q  192 agccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||||||||||  |||| |||||||||| || ||||||||||||||||| ||||||    
T  12013 agccgaagaagactagaattggtggaaaggtgtttgctttgactggtacacagact 11958  T

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Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33281 - 33342
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacg 62  Q
    |||||||||||||| ||| || |||||||| |||||||| || |||||||||||||| ||||    
T  33281 gagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccacaagagcaacg 33342  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 153887 - 153714
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtgga 100  Q
    ||||||||||||  ||||||| ||||| || |||||||| || ||| |||| |||||||| || |||   |  |||||||||||||| ||||| |||||     
T  153887 gagagatgctcccactgagattgtttgcttcaagtgtggtgaaaaaagccataagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggt 153788  T
Q  101 cagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    ||||| || ||||   |||| ||||| ||||| || ||  |||| |||||||| || ||||| || ||||||||    
T  153787 cagaaaggacacacattagctgattgtaagcgtggagacattgtttgctataactgcaatgaggaaggtcacat 153714  T

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Target: scaffold0708 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 5128 - 5300
Alignment:
Q  75 atgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacat 174  Q
    |||||| ||| |||||||| ||||| ||||| || ||||  ||||| || || ||||| || ||  |||| ||||| || || || ||||| ||||| ||    
T  5128 atgagaggaaatgtttcaggtgtggtcagaaaggacacaccctagctgaatgtaagcgtggagacattgtctgctacaactgcaacgaagaaggtcatat 5227  T
Q  175 cagtactcagtgcacacagccgaagaaggttagagttggtggaaaagtttttgctttgactggtacgcagact 247  Q
    |||| |  |||| || ||||||||||||| |||    ||||| ||||| ||||| ||||||||||||||||||    
T  5228 cagttcatagtgtactcagccgaagaaggctaggaccggtgggaaagtgtttgcattgactggtacgcagact 5300  T

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Target: scaffold1423 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 291 - 346
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||| ||||| || |||||||  ||||| ||||||||||||||||||||    
T  291 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaa 346  T

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Target: scaffold0611 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 9356 - 9411
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||| ||||| || |||||||  ||||| ||||||||||||||||||||    
T  9356 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaa 9411  T

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Target: scaffold0412 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 15492 - 15675
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacaga 104  Q
    ||||||||||| |||||  | ||||| || ||||| ||||||||||||||||| ||  ||||| |  |||| |  |||||||||||| | |||||  |||    
T  15492 gatgctcctgcggagatcatctgtttcaattgtggtgagaaaggccacaagagcaatttttgtccagaggaggcaaagaagtgtttccggtgtggcaaga 15591  T
Q  105 agggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 188  Q
    ||||||| |   |||| |||||||||| |  |||  |||| ||||  ||||| ||||| |||||||| ||| || |||||||||    
T  15592 agggtcatacattagctgattgcaagcacaatgacattgtgtgcttcaattgcaatgatgagggtcatatcggttctcagtgca 15675  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 12352 - 12407
Alignment:
Q  32 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtg 87  Q
    ||||||||||||||||||||||||||||| |||| |   || ||||||||||||||    
T  12352 aagtgtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtg 12407  T

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Target: scaffold0261; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 20532 - 20587
Alignment:
Q  32 aagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtg 87  Q
    ||||||||||||||||||||||||||||| |||| |   || ||||||||||||||    
T  20532 aagtgtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtg 20587  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 28862 - 28949
Alignment:
Q  26 tgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcaca 113  Q
    ||||| || ||||||||||||||||||||||| || |||||| | ||||| |  ||||| |||||| | |||||  ||||||||||||    
T  28862 tgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctaaggaggtaaagaaatgtttccggtgtggcaagaagggtcaca 28949  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 14475 - 14420
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||| ||||| || |||||||  ||||||||||||||||| ||||||||    
T  14475 gatgctcctgcagagattgtctgttttacttgtggcgagaaaggccataagagtaa 14420  T

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Target: scaffold0434 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5811 - 5877
Alignment:
Q  1 gagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||||| |||| || |||| ||  |||||||| || ||||||||||||||||| ||||||    
T  5811 gagagatgctcctactgatattgtttattacaagtgtggtgaaaaaggccacaagagtaatgtttgt 5877  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 179 - 117
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||||| ||||| || ||||| || ||||| ||||||||||||||||| || ||||||    
T  179 gatgctcctgcagagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 117  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 30923 - 30981
Alignment:
Q  2 agagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||| |||||||||||| ||||| |  |||||||| ||||| ||||||||||||||    
T  30923 agagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaa 30981  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 11269 - 11331
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| | ||||| || |||||||| ||||| ||||||||||||||||| || ||||||    
T  11269 gatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 11331  T

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Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 14954 - 15016
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| | ||||| || |||||||| ||||| ||||||||||||||||| || ||||||    
T  14954 gatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15016  T

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Target: scaffold0130 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 7696 - 7754
Alignment:
Q  9 ctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||| || || |||||||| || ||||||| |||||||||||||||||| ||||||    
T  7696 ctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 7754  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 116015 - 115953
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgt 67  Q
    ||||||||| |||| || |||||||| | |||||| || ||||||||||||||||| ||||||    
T  116015 gatgctcctactgatattgtttgtttcatgtgtggtgaaaaaggccacaagagtaatgtttgt 115953  T

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Target: scaffold0993 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 1370 - 1318
Alignment:
Q  8 gctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||| |||||| ||||||| ||  ||||| ||||||||||||||||||||    
T  1370 gctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaa 1318  T

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Target: scaffold0605 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 1629 - 1565
Alignment:
Q  47 ggccacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtca 111  Q
    |||||||||||||| | ||| ||| | ||||||||||| ||||||||||| || ||||| |||||    
T  1629 ggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaatggtca 1565  T

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Target: scaffold0518 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 2226 - 2198
Alignment:
Q  1 gagagatgctcctgctgagatagtttgtt 29  Q
    |||||||||||||||||||||||||||||    
T  2226 gagagatgctcctgctgagatagtttgtt 2198  T

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Target: scaffold0501 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 315 - 263
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||| |||||||||||| || || ||||| ||||| |||||||||||||||||    
T  315 gatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagag 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 7570 - 7622
Alignment:
Q  5 gatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagag 57  Q
    |||| |||||||||||| || || ||||| ||||| |||||||||||||||||    
T  7570 gatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagag 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 104618 - 104562
Alignment:
Q  4 agatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaa 60  Q
    ||||||||||| |||||| ||||| | ||  ||||| ||||||||||||||||||||    
T  104618 agatgctcctgttgagattgtttgctatacttgtggtgagaaaggccacaagagtaa 104562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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