View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9010_low_26 (Length: 241)
Name: NF9010_low_26
Description: NF9010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9010_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 63 - 229
Target Start/End: Original strand, 29207412 - 29207578
Alignment:
| Q |
63 |
tctttacctgtctatatttgtacggccccacttgactaaatatttcaacactttcattattaaaatatatccaatttccaataattttataaacctaaag |
162 |
Q |
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| T |
29207412 |
tctttacctgtctatatttgtacggccccacttgactaaatatttcaacactttcattattaaaatatatccaatttccaataattttataaacctaaag |
29207511 |
T |
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| Q |
163 |
cagagccatgttttcggatataatatcagaaaaccttacaataccccccaaaagcaacctagtgatg |
229 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
29207512 |
cagagccatgttttcagatataatatcagaaaaccttacaataccccccaaaagcaacctaatgatg |
29207578 |
T |
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