View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9011_high_6 (Length: 696)

Name: NF9011_high_6
Description: NF9011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9011_high_6
NF9011_high_6
[»] chr7 (35 HSPs)
chr7 (178-678)||(1703588-1704102)
chr7 (465-574)||(19777924-19778033)
chr7 (470-574)||(26203022-26203126)
chr7 (482-555)||(11740376-11740449)
chr7 (470-538)||(11736139-11736207)
chr7 (484-558)||(7833761-7833835)
chr7 (485-574)||(48984381-48984469)
chr7 (513-574)||(11736212-11736273)
chr7 (107-159)||(26652766-26652818)
chr7 (298-406)||(22716511-22716621)
chr7 (106-163)||(38301244-38301301)
chr7 (470-538)||(38448363-38448430)
chr7 (107-159)||(43368101-43368153)
chr7 (1-32)||(10932594-10932625)
chr7 (1-32)||(11321922-11321953)
chr7 (1-32)||(18386552-18386583)
chr7 (1-32)||(18470711-18470742)
chr7 (1-32)||(21784898-21784929)
chr7 (1-32)||(26371846-26371877)
chr7 (1-32)||(26994262-26994293)
chr7 (1-32)||(36769606-36769637)
chr7 (1-32)||(40753182-40753213)
chr7 (1-32)||(41211237-41211268)
chr7 (1-32)||(44748722-44748753)
chr7 (1-32)||(46633724-46633755)
chr7 (1-32)||(47947787-47947818)
chr7 (1-32)||(47953217-47953248)
chr7 (1-31)||(1870163-1870193)
chr7 (492-554)||(16563495-16563557)
chr7 (492-554)||(16602105-16602167)
chr7 (1-31)||(26652894-26652924)
chr7 (1-31)||(34295441-34295471)
chr7 (492-554)||(37928326-37928388)
chr7 (107-159)||(34295547-34295599)
chr7 (1-29)||(43158723-43158751)
[»] chr4 (47 HSPs)
chr4 (470-574)||(50086635-50086739)
chr4 (473-574)||(16072348-16072449)
chr4 (470-568)||(49649891-49649989)
chr4 (437-555)||(27655329-27655448)
chr4 (465-574)||(40161032-40161141)
chr4 (460-567)||(6480663-6480770)
chr4 (492-568)||(41377213-41377289)
chr4 (473-555)||(42810389-42810471)
chr4 (473-538)||(21416206-21416271)
chr4 (462-558)||(30116768-30116864)
chr4 (487-574)||(14815384-14815471)
chr4 (470-555)||(50095280-50095365)
chr4 (1-32)||(4325817-4325848)
chr4 (1-32)||(9512369-9512400)
chr4 (1-32)||(14296623-14296654)
chr4 (1-32)||(14314871-14314902)
chr4 (1-32)||(20802560-20802591)
chr4 (1-32)||(23327944-23327975)
chr4 (1-32)||(23521906-23521937)
chr4 (1-32)||(24002365-24002396)
chr4 (1-32)||(29785566-29785597)
chr4 (1-32)||(32181289-32181320)
chr4 (1-32)||(33552871-33552902)
chr4 (1-32)||(36743717-36743748)
chr4 (1-32)||(38812546-38812577)
chr4 (1-32)||(43641125-43641156)
chr4 (1-32)||(50727942-50727973)
chr4 (1-32)||(50735956-50735987)
chr4 (1-32)||(56154647-56154678)
chr4 (1-31)||(1231338-1231368)
chr4 (1-31)||(21202766-21202796)
chr4 (513-567)||(22280352-22280406)
chr4 (97-159)||(44649287-44649349)
chr4 (1-31)||(47642520-47642550)
chr4 (1-31)||(50178522-50178552)
chr4 (109-159)||(52949620-52949670)
chr4 (1-31)||(52949747-52949777)
chr4 (478-524)||(53934089-53934135)
chr4 (2-32)||(54543016-54543046)
chr4 (1-31)||(55065362-55065392)
chr4 (1-30)||(52319351-52319380)
chr4 (1-29)||(3649665-3649693)
chr4 (4-32)||(20518054-20518082)
chr4 (107-163)||(37695676-37695732)
chr4 (107-163)||(47642626-47642682)
chr4 (107-159)||(50178628-50178680)
chr4 (1-29)||(53200673-53200701)
[»] chr8 (25 HSPs)
chr8 (485-574)||(38388529-38388618)
chr8 (470-568)||(1988792-1988890)
chr8 (478-574)||(24757059-24757155)
chr8 (479-553)||(34832302-34832376)
chr8 (470-567)||(1551508-1551605)
chr8 (484-574)||(22266240-22266328)
chr8 (470-574)||(35762296-35762399)
chr8 (465-551)||(37564779-37564865)
chr8 (470-567)||(9791864-9791960)
chr8 (487-537)||(13904055-13904105)
chr8 (474-522)||(12201850-12201898)
chr8 (474-522)||(12446278-12446326)
chr8 (1-32)||(4052503-4052534)
chr8 (1-32)||(8673106-8673137)
chr8 (1-32)||(14005095-14005126)
chr8 (1-32)||(21272707-21272738)
chr8 (1-32)||(29563277-29563308)
chr8 (1-32)||(32303636-32303667)
chr8 (1-32)||(34063151-34063182)
chr8 (1-32)||(37664334-37664365)
chr8 (1-32)||(45446478-45446509)
chr8 (1-31)||(10467088-10467118)
chr8 (1-31)||(27103983-27104013)
chr8 (1-31)||(41548642-41548672)
chr8 (107-159)||(22999153-22999205)
[»] chr2 (25 HSPs)
chr2 (473-574)||(19994924-19995025)
chr2 (462-569)||(36622114-36622222)
chr2 (470-574)||(41385045-41385149)
chr2 (470-573)||(43248708-43248811)
chr2 (497-574)||(16498137-16498214)
chr2 (478-571)||(19606282-19606375)
chr2 (465-574)||(35501406-35501515)
chr2 (478-538)||(40664663-40664723)
chr2 (1-32)||(5278870-5278901)
chr2 (1-32)||(9717247-9717278)
chr2 (1-32)||(17540738-17540769)
chr2 (1-32)||(19513725-19513756)
chr2 (1-32)||(26418946-26418977)
chr2 (1-32)||(32497938-32497969)
chr2 (1-32)||(33889266-33889297)
chr2 (1-32)||(35114808-35114839)
chr2 (1-32)||(35473036-35473067)
chr2 (1-32)||(38993107-38993138)
chr2 (1-31)||(1247171-1247201)
chr2 (1-31)||(9732966-9732996)
chr2 (1-31)||(18685860-18685890)
chr2 (1-31)||(40692321-40692351)
chr2 (458-547)||(18717883-18717972)
chr2 (1-29)||(6896194-6896222)
chr2 (482-550)||(27896493-27896561)
[»] chr3 (35 HSPs)
chr3 (434-574)||(29458040-29458179)
chr3 (470-569)||(20585816-20585915)
chr3 (470-574)||(26835700-26835804)
chr3 (474-568)||(45054399-45054493)
chr3 (435-574)||(49452577-49452713)
chr3 (470-571)||(14622103-14622204)
chr3 (470-558)||(30863629-30863717)
chr3 (514-574)||(32961187-32961247)
chr3 (470-558)||(35483617-35483705)
chr3 (470-517)||(32961504-32961551)
chr3 (463-554)||(48338839-48338930)
chr3 (493-554)||(17109561-17109622)
chr3 (106-159)||(31883157-31883210)
chr3 (1-32)||(3864705-3864736)
chr3 (1-32)||(4851486-4851517)
chr3 (1-32)||(20609678-20609709)
chr3 (1-32)||(21373954-21373985)
chr3 (1-32)||(25927357-25927388)
chr3 (1-32)||(28675814-28675845)
chr3 (1-32)||(29584899-29584930)
chr3 (1-32)||(34026691-34026722)
chr3 (463-558)||(36436606-36436701)
chr3 (1-32)||(38213378-38213409)
chr3 (1-32)||(39052868-39052899)
chr3 (1-32)||(39215499-39215530)
chr3 (1-32)||(42636433-42636464)
chr3 (1-32)||(44116963-44116994)
chr3 (1-32)||(47958462-47958493)
chr3 (500-555)||(49419085-49419140)
chr3 (1-32)||(51259810-51259841)
chr3 (2-32)||(3695323-3695353)
chr3 (460-554)||(4020124-4020218)
chr3 (1-31)||(31883052-31883082)
chr3 (495-553)||(44291258-44291316)
chr3 (107-159)||(50386592-50386644)
[»] chr6 (22 HSPs)
chr6 (470-574)||(17900748-17900852)
chr6 (460-574)||(11101906-11102020)
chr6 (470-574)||(26608910-26609013)
chr6 (465-567)||(19418608-19418710)
chr6 (479-567)||(10252979-10253067)
chr6 (473-574)||(22297584-22297684)
chr6 (460-519)||(1970647-1970706)
chr6 (492-554)||(18493269-18493331)
chr6 (465-558)||(34301869-34301963)
chr6 (1-32)||(166998-167029)
chr6 (1-32)||(2614919-2614950)
chr6 (1-32)||(3932882-3932913)
chr6 (1-32)||(4494190-4494221)
chr6 (1-32)||(9902733-9902764)
chr6 (1-32)||(10960023-10960054)
chr6 (1-32)||(17443285-17443316)
chr6 (1-32)||(18057542-18057573)
chr6 (1-32)||(24203385-24203416)
chr6 (1-32)||(24242687-24242718)
chr6 (1-31)||(10485181-10485211)
chr6 (97-151)||(31870271-31870325)
chr6 (1-31)||(32132455-32132485)
[»] chr1 (31 HSPs)
chr1 (433-574)||(5178741-5178881)
chr1 (470-574)||(11802914-11803018)
chr1 (479-566)||(48502580-48502667)
chr1 (436-574)||(52112357-52112492)
chr1 (462-574)||(13643581-13643692)
chr1 (500-557)||(25161449-25161506)
chr1 (497-574)||(50295245-50295322)
chr1 (471-567)||(2356382-2356477)
chr1 (107-161)||(42512987-42513041)
chr1 (106-159)||(38663037-38663090)
chr1 (107-159)||(50304556-50304608)
chr1 (1-32)||(844835-844866)
chr1 (1-32)||(1351546-1351577)
chr1 (1-32)||(6711157-6711188)
chr1 (1-32)||(16386886-16386917)
chr1 (1-32)||(16476266-16476297)
chr1 (1-32)||(17887980-17888011)
chr1 (1-32)||(26764906-26764937)
chr1 (1-32)||(30105791-30105822)
chr1 (1-32)||(31004164-31004195)
chr1 (1-32)||(42510557-42510588)
chr1 (1-32)||(45490986-45491017)
chr1 (1-32)||(50540376-50540407)
chr1 (1-31)||(16437395-16437425)
chr1 (1-31)||(38663165-38663195)
chr1 (1-31)||(44738153-44738183)
chr1 (481-554)||(13969113-13969186)
chr1 (497-554)||(15419681-15419738)
chr1 (493-554)||(44109097-44109158)
chr1 (1-29)||(6029412-6029440)
chr1 (1-29)||(50382514-50382542)
[»] chr5 (15 HSPs)
chr5 (434-574)||(35556890-35557027)
chr5 (465-574)||(19129728-19129838)
chr5 (434-532)||(26139710-26139807)
chr5 (486-558)||(8435079-8435151)
chr5 (1-32)||(553420-553451)
chr5 (1-32)||(2351703-2351734)
chr5 (1-32)||(3735380-3735411)
chr5 (1-32)||(4818182-4818213)
chr5 (1-32)||(7523195-7523226)
chr5 (1-32)||(21739203-21739234)
chr5 (1-32)||(28090562-28090593)
chr5 (1-32)||(31644469-31644500)
chr5 (1-32)||(32528738-32528769)
chr5 (1-32)||(39788216-39788247)
chr5 (465-551)||(10568975-10569060)
[»] scaffold0005 (1 HSPs)
scaffold0005 (487-574)||(24240-24327)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-32)||(2380-2411)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-32)||(19132-19163)
[»] scaffold0169 (2 HSPs)
scaffold0169 (1-32)||(12578-12609)
scaffold0169 (1-32)||(18096-18127)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-32)||(23598-23629)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-32)||(101972-102003)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-32)||(373006-373037)
[»] scaffold0886 (1 HSPs)
scaffold0886 (460-554)||(1098-1192)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-31)||(51463-51493)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-29)||(1685-1713)


Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 178 - 678
Target Start/End: Original strand, 1703588 - 1704102
Alignment:
Q  178 taatataggtcaggtaaccattttgttaggctaaaaaagtatatggactgtgccaagatattttaaaattactcttttcaatttttaaattgcnnnnnnn 277  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||           
T  1703588 taatacaggtcaggtaaccagtttgttaggctaaaaaagtatatggactgtgcgaagatattttaaaattactcttttcaatttttaaattgcttttttt 1703687  T
Q  278 nnnaactgtcgttggtccggcaacaattaaccgtcgttcaatttttcaacgacagttaagtgtcgttagacttttaaaatcggttgaagctatttaaaat 377  Q
       ||| |||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703688 t--aaccgtcgctggtccgacaacaattaaccgttgttcaattttttaacgacagttaagtgtcgttagacttttaaaatcggttgaagctatttaaaat 1703785  T
Q  378 gtgattgagtcgttctaaaaaatgtccaatggtgaaggatttgattttaatttttagggtcttgttaactagtgtctcgggagacattggtcaaggaatt 477  Q
    ||||||||  ||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  1703786 gtgattgaaccgttctaaaaaatgtccaatggtgagggattcaagtttaatttttagggtcttgttaaccagtgtctcggg-ggcattggtcaaggaatt 1703884  T
Q  478 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg-ctcc 576  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||     
T  1703885 caaaagtagaaaaattgtctcggaaatataaactgttacttttgactaactaattattacacaactttttaataaaatcttacctcttttagctgcctcg 1703984  T
Q  577 ggggcaccaattaacattctcctaatttttaaatgaaataattattgatga----------------ttgggatgatgaaattgtacttacctactaatt 660  Q
     |  ||||  |||||||||||||||||||||||||||||||||||||||||                | |||||||||||||| | ||||||||||||||    
T  1703985 agaacaccggttaacattctcctaatttttaaatgaaataattattgatgagattttactatttatttagggatgatgaaatttttcttacctactaatt 1704084  T
Q  661 tgttttaaggtgggtgct 678  Q
    ||||||||||||||||||    
T  1704085 tgttttaaggtgggtgct 1704102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 465 - 574
Target Start/End: Complemental strand, 19778033 - 19777924
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 564  Q
    |||| ||||||| ||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||||||||  ||| |||||||||||||| |||||    
T  19778033 tggttaaggaatccaaaagtagaaaaattatcttgaaaatataaactgttattttttattaactaattattacatcactctttaataaaatcttacctct 19777934  T
Q  565 tttagctgct 574  Q
    ||||||||||    
T  19777933 tttagctgct 19777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 574
Target Start/End: Original strand, 26203022 - 26203126
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| ||||| |||||||||| |||||||||| ||| | || ||||||||||||||||||||||||  ||||||||||||||| || ||||||||||    
T  26203022 aaggaatccaaaagtagaaaaattgtcttggaaatctaaccagtcacttttgactaactaattattacaccactttttaataaaattttacctcttttag 26203121  T
Q  570 ctgct 574  Q
     ||||    
T  26203122 ttgct 26203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 11740376 - 11740449
Alignment:
Q  482 aatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 555  Q
    |||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||  |||||||||||||||    
T  11740376 aatagaaaaattgtcttgaaaatataaactgttacttttgatcaactaattattacaccactttttaataaaat 11740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 11736139 - 11736207
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 538  Q
    |||||||| |||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  11736139 aaggaatttaaaagtagaaaaattatcttagaaatataaaccgttacttttgaccaactaattattaca 11736207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 558
Target Start/End: Original strand, 7833761 - 7833835
Alignment:
Q  484 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    |||||||||| ||||| ||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||    
T  7833761 tagaaaaattgtcttgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatctt 7833835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 485 - 574
Target Start/End: Complemental strand, 48984469 - 48984381
Alignment:
Q  485 agaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||||||| ||| ||| || ||| ||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  48984469 agaaaaattattttgaaaacattaacggttactttt-actaactaattattacaccactttttaataaaatcttacctcttttaactgct 48984381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 574
Target Start/End: Original strand, 11736212 - 11736273
Alignment:
Q  513 ttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||| | |||||| ||||||    
T  11736212 ttacttttgaccaactaattattacaccactttttaataaaatcttacttcttttggctgct 11736273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 26652818 - 26652766
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  26652818 tgttctcccttgtattgtgctgttttttcttatactgttatgtactgtacttg 26652766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 298 - 406
Target Start/End: Complemental strand, 22716621 - 22716511
Alignment:
Q  298 caacaattaaccgtcgttcaatttttcaacgacagttaagtgtcgttagac--ttttaaaatcggttgaagctatttaaaatgtgattgagtcgttctaa 395  Q
    ||||||||||  ||| ||| |||||  ||||||||||||||||| || |||  |||||| ||||||| || ||||||||||||||||| | | | || ||    
T  22716621 caacaattaattgtcattcgattttgtaacgacagttaagtgtcatttgacaattttaagatcggttaaacctatttaaaatgtgattaaatagctcaaa 22716522  T
Q  396 aaaatgtccaa 406  Q
    |||||||||||    
T  22716521 aaaatgtccaa 22716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 38301301 - 38301244
Alignment:
Q  106 ttgttctcccttatattttgctgttctttcttatactattatgtactgtacttgttgt 163  Q
    |||||||||||| |||| || ||||||||||| |||| || |||||||||||||||||    
T  38301301 ttgttctcccttgtattgtgttgttctttcttgtactgttctgtactgtacttgttgt 38301244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 38448363 - 38448430
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 538  Q
    |||||||||||||||| ||||||||| ||| |||||||||   ||  ||||||||||||||||||||||    
T  38448363 aaggaattcaaaaata-aaaaattattttgaaaatataaatcattgtttttgactaactaattattaca 38448430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 43368153 - 43368101
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  43368153 tgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 43368101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10932594 - 10932625
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  10932594 tttttgtcccacgtacaagttgtctaaaatac 10932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11321922 - 11321953
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  11321922 tttttgtcccacgtacaagttgtctaaaatac 11321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18386583 - 18386552
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18386583 tttttgtcccacgtacaagttgtctaaaatac 18386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18470742 - 18470711
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18470742 tttttgtcccacgtacaagttgtctaaaatac 18470711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21784929 - 21784898
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  21784929 tttttgtcccacgtacaagttgtctaaaatac 21784898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26371846 - 26371877
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  26371846 tttttgtcccacgtacaagttgtctaaaatac 26371877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26994262 - 26994293
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  26994262 tttttgtcccacgtacaagttgtctaaaatac 26994293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 36769606 - 36769637
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  36769606 tttttgtcccacgtacaagttgtctaaaatac 36769637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40753213 - 40753182
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  40753213 tttttgtcccacgtacaagttgtctaaaatac 40753182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41211237 - 41211268
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  41211237 tttttgtcccacgtacaagttgtctaaaatac 41211268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44748753 - 44748722
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  44748753 tttttgtcccacgtacaagttgtctaaaatac 44748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 46633755 - 46633724
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  46633755 tttttgtcccacgtacaagttgtctaaaatac 46633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 47947818 - 47947787
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  47947818 tttttgtcccacgtacaagttgtctaaaatac 47947787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 47953248 - 47953217
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  47953248 tttttgtcccacgtacaagttgtctaaaatac 47953217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1870193 - 1870163
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  1870193 tttttgtcccacgtacaagttgtctaaaata 1870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 554
Target Start/End: Original strand, 16563495 - 16563557
Alignment:
Q  492 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||||||||||||||| ||| |||| | ||| |||| ||||||  ||||||||||||||    
T  16563495 ttatcttggaaatataaactattatttttcagtaaataataattacattactttttaataaaa 16563557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 554
Target Start/End: Complemental strand, 16602167 - 16602105
Alignment:
Q  492 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||||||||||||||| ||| |||| | ||| |||| ||||||  ||||||||||||||    
T  16602167 ttatcttggaaatataaactattatttttcagtaaataataattacattactttttaataaaa 16602105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 26652924 - 26652894
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  26652924 tttttgtcccacgtacaagttgtctaaaata 26652894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 34295441 - 34295471
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  34295441 tttttgtcccacgtacaagttgtctaaaata 34295471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 554
Target Start/End: Complemental strand, 37928388 - 37928326
Alignment:
Q  492 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||| ||||||||| ||||| ||||||  || ||||||||||| |||||||| ||||||    
T  37928388 ttatcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaa 37928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 34295547 - 34295599
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| || ||||||||||| |||| || |||||||||||||    
T  34295547 tgttctcccttgtattgtgttgttctttcttgtactgttttgtactgtacttg 34295599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 43158723 - 43158751
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  43158723 tttttgtcccacgtacaagttgtctaaaa 43158751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 470 - 574
Target Start/End: Original strand, 50086635 - 50086739
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||    
T  50086635 aaggaatccaaaagtagaaaaattgtcttggaaatataaactgttacttttaactaactaattattacaccattttttaataaaatcttgcctcttttag 50086734  T
Q  570 ctgct 574  Q
    |||||    
T  50086735 ctgct 50086739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 574
Target Start/End: Complemental strand, 16072449 - 16072348
Alignment:
Q  473 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 572  Q
    |||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||| |||||||||||||    
T  16072449 gaatccaaaagtagaaaaattgtcttggaaatataaaccgttacttttgactaactaattattacatcattttttaataaaatcttacctcttttagctg 16072350  T
Q  573 ct 574  Q
    ||    
T  16072349 ct 16072348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 568
Target Start/End: Original strand, 49649891 - 49649989
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 568  Q
    ||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  49649891 aaggaatccaaaaataaaaaaattatgttggaaatataaacggttacttttgactaactaattattacataactttttaataaaatattatctctttta 49649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 555
Target Start/End: Complemental strand, 27655448 - 27655329
Alignment:
Q  437 tcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttac--ttttgactaactaattat 534  Q
    |||||||||| |||||||| || |  |||||| ||||||| | ||| |||||||||| |||| |||||||||||||||||  ||||||||||||||||||    
T  27655448 tcttgttaaccagtgtctctggggt-attggttaaggaatgctaaagtagaaaaattgtcttagaaatataaactgttacttttttgactaactaattat 27655350  T
Q  535 tacagaactttttaataaaat 555  Q
    ||||  |||||||||||||||    
T  27655349 tacaccactttttaataaaat 27655329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 465 - 574
Target Start/End: Original strand, 40161032 - 40161141
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 564  Q
    |||| |||||||  |||| || ||||||||||||| |||||||||| |||| ||||||||  ||||||||||||  |||||||||||||||||| |||||    
T  40161032 tggttaaggaatctaaaagtaaaaaaattatcttgaaaatataaaccgttatttttgactgcctaattattacaccactttttaataaaatcttacctct 40161131  T
Q  565 tttagctgct 574  Q
    |||| |||||    
T  40161132 tttacctgct 40161141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 567
Target Start/End: Original strand, 6480663 - 6480770
Alignment:
Q  460 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttg 559  Q
    |||| |||| || |||| ||||| || ||||| ||||||| ||||||||||||||| |||| |||||||||||||||||  |||||||||| |||||||     
T  6480663 gacactggttaatgaatccaaaactaaaaaaaatatcttgaaaatataaactgttattttttactaactaattattacatcactttttaattaaatctta 6480762  T
Q  560 cctctttt 567  Q
    ||||||||    
T  6480763 cctctttt 6480770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 492 - 568
Target Start/End: Complemental strand, 41377289 - 41377213
Alignment:
Q  492 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 568  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||| || |||||||||    
T  41377289 ttatcttagaaatataaaccgttacttttgactaactaattattgcatcactttttaataaaattttacctctttta 41377213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 555
Target Start/End: Complemental strand, 42810471 - 42810389
Alignment:
Q  473 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 555  Q
    |||||||||| |||||||||| |||| |||||||||||||||| ||||||| ||||||| ||||||  |||||| ||||||||    
T  42810471 gaattcaaaagtagaaaaattgtcttagaaatataaactgttatttttgacaaactaataattacatcacttttcaataaaat 42810389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 538
Target Start/End: Complemental strand, 21416271 - 21416206
Alignment:
Q  473 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 538  Q
    |||| ||||| |||||||||| | |||||||||||||  |||||||||||||||||||||||||||    
T  21416271 gaatccaaaagtagaaaaattgtattggaaatataaaaggttacttttgactaactaattattaca 21416206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 30116864 - 30116768
Alignment:
Q  462 cattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    ||||||| || ||||  |||| || ||||||| |||||||||||||||  |||| |||||| ||||||||||||| |  | ||||||||||||||||    
T  30116864 cattggttaatgaatctaaaagtaaaaaaattgtcttggaaatataaatcgttatttttgattaactaattattatatcattttttaataaaatctt 30116768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 14815384 - 14815471
Alignment:
Q  487 aaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||| | |||||||||||| || ||| ||||||| |||||||||| |||  |  ||||||||||||||| | |||||||||||||    
T  14815384 aaaaattgtgttggaaatataaccttttatttttgaccaactaattatcacaccagcttttaataaaatcttacttcttttagctgct 14815471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 470 - 555
Target Start/End: Complemental strand, 50095365 - 50095280
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 555  Q
    |||||||| |||| || ||||||| | ||| ||||| ||||| |||||||| ||||||||||||||||   | |||||||||||||    
T  50095365 aaggaatttaaaagtaaaaaaattgttttgaaaatacaaactattacttttaactaactaattattacgatattttttaataaaat 50095280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4325848 - 4325817
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  4325848 tttttgtcccacgtacaagttgtctaaaatac 4325817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9512369 - 9512400
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  9512369 tttttgtcccacgtacaagttgtctaaaatac 9512400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 14296654 - 14296623
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaatac 14296623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 14314902 - 14314871
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaatac 14314871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 20802560 - 20802591
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  20802560 tttttgtcccacgtacaagttgtctaaaatac 20802591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23327975 - 23327944
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  23327975 tttttgtcccacgtacaagttgtctaaaatac 23327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23521937 - 23521906
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  23521937 tttttgtcccacgtacaagttgtctaaaatac 23521906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24002396 - 24002365
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  24002396 tttttgtcccacgtacaagttgtctaaaatac 24002365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29785566 - 29785597
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  29785566 tttttgtcccacgtacaagttgtctaaaatac 29785597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32181320 - 32181289
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  32181320 tttttgtcccacgtacaagttgtctaaaatac 32181289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33552871 - 33552902
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  33552871 tttttgtcccacgtacaagttgtctaaaatac 33552902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 36743717 - 36743748
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  36743717 tttttgtcccacgtacaagttgtctaaaatac 36743748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38812577 - 38812546
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  38812577 tttttgtcccacgtacaagttgtctaaaatac 38812546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43641156 - 43641125
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  43641156 tttttgtcccacgtacaagttgtctaaaatac 43641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 50727942 - 50727973
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  50727942 tttttgtcccacgtacaagttgtctaaaatac 50727973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 50735956 - 50735987
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  50735956 tttttgtcccacgtacaagttgtctaaaatac 50735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 56154678 - 56154647
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  56154678 tttttgtcccacgtacaagttgtctaaaatac 56154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1231368 - 1231338
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  1231368 tttttgtcccacgtacaagttgtctaaaata 1231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 21202796 - 21202766
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  21202796 tttttgtcccacgtacaagttgtctaaaata 21202766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 22280406 - 22280352
Alignment:
Q  513 ttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 567  Q
    ||||||||||| ||||||||||||||  || ||||||||||||||| | ||||||    
T  22280406 ttacttttgaccaactaattattacaccacattttaataaaatcttacttctttt 22280352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 44649287 - 44649349
Alignment:
Q  97 tgtcatttattgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    |||||| | |||||||||||| |||| | |||||||||||| |||| || |||||||||||||    
T  44649287 tgtcatgtgttgttctcccttgtattgtactgttctttcttgtactgttctgtactgtacttg 44649349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 47642520 - 47642550
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  47642520 tttttgtcccacgtacaagttgtctaaaata 47642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 50178522 - 50178552
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  50178522 tttttgtcccacgtacaagttgtctaaaata 50178552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 52949670 - 52949620
Alignment:
Q  109 ttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  52949670 ttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 52949620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 52949777 - 52949747
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  52949777 tttttgtcccacgtacaagttgtctaaaata 52949747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 53934089 - 53934135
Alignment:
Q  478 caaaaatagaaaaattatcttggaaatataaactgttacttttgact 524  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  53934089 caaaaattgaaaaattatcttgtaaatataaattgttaattttgact 53934135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 54543046 - 54543016
Alignment:
Q  2 ttttgtcccacgtacaagttgtctaaaatac 32  Q
    |||||||||||||||||||||||||||||||    
T  54543046 ttttgtcccacgtacaagttgtctaaaatac 54543016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 55065362 - 55065392
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  55065362 tttttgtcccacgtacaagttgtctaaaata 55065392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 52319380 - 52319351
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaat 30  Q
    ||||||||||||||||||||||||||||||    
T  52319380 tttttgtcccacgtacaagttgtctaaaat 52319351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3649693 - 3649665
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  3649693 tttttgtcccacgtacaagttgtctaaaa 3649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 20518054 - 20518082
Alignment:
Q  4 ttgtcccacgtacaagttgtctaaaatac 32  Q
    |||||||||||||||||||||||||||||    
T  20518054 ttgtcccacgtacaagttgtctaaaatac 20518082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 37695676 - 37695732
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttgttgt 163  Q
    ||||||||||| |||| || ||||||||||| |||| || ||||| |||||||||||    
T  37695676 tgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtacttgttgt 37695732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 47642626 - 47642682
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttgttgt 163  Q
    ||||||||||| |||| || ||||||||||| |||| || |||||| ||||||||||    
T  47642626 tgttctcccttgtattgtgttgttctttcttgtactgttctgtactatacttgttgt 47642682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 50178628 - 50178680
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| || ||||||||||| |||| || |||||||||||||    
T  50178628 tgttctcccttgtattgtgatgttctttcttgtactgttctgtactgtacttg 50178680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 53200673 - 53200701
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  53200673 tttttgtcccacgtacaagttgtctaaaa 53200701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 485 - 574
Target Start/End: Complemental strand, 38388618 - 38388529
Alignment:
Q  485 agaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  38388618 agaaaaattatcttggaaatataaactattacttttgactaactaattattacatcactttttaataaaatcttacctcttttagctgct 38388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 568
Target Start/End: Complemental strand, 1988890 - 1988792
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 568  Q
    ||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||    
T  1988890 aaggaatccaaaagtagaaaaattgtcttcgaaatataaactgttacttttgactaactaattattacattactttttaataaattcttacctctttta 1988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 574
Target Start/End: Original strand, 24757059 - 24757155
Alignment:
Q  478 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||    
T  24757059 caaaagtagaaaaattgacttgaaaatataaactgttacttttgactaactaattattacatcactttttaataaaatcttatctcttttagctgct 24757155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 479 - 553
Target Start/End: Complemental strand, 34832376 - 34832302
Alignment:
Q  479 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaa 553  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  34832376 aaaagtagaaaaattattttggaaatataaattgttacttttgactaactaattattacaccactttttaataaa 34832302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 470 - 567
Target Start/End: Complemental strand, 1551605 - 1551508
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 567  Q
    ||||||| ||||| |||||||||| ||||  ||||||||| ||||||||||||| |||||||||| |||  |||||||||||||||||| ||||||||    
T  1551605 aaggaatccaaaagtagaaaaattgtcttttaaatataaagtgttacttttgaccaactaattatgacaccactttttaataaaatcttacctctttt 1551508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 574
Target Start/End: Original strand, 22266240 - 22266328
Alignment:
Q  484 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    |||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||   |||||||||||||||||| ||||||||| |||||    
T  22266240 tagaaaaattgtcttgaaaacataaactgttactttttactaactaattattac--cactttttaataaaatcttacctcttttaactgct 22266328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 470 - 574
Target Start/End: Complemental strand, 35762399 - 35762296
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| ||||||||||||||  |  ||| ||||||||||||||| |||||| ||| |||||||||||  ||||||||||||||| ||||||||||||     
T  35762399 aaggaatccaaaaatagaaaaaaaaatttgaaaatataaactgtta-ttttgattaattaattattacaccactttttaataaaattttgcctcttttaa 35762301  T
Q  570 ctgct 574  Q
    |||||    
T  35762300 ctgct 35762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 37564865 - 37564779
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaata 551  Q
    |||| |||||||  |||| ||||||||||||||| ||||||||  | |||||||||||| || |||||||||||  |||||||||||    
T  37564865 tggttaaggaatctaaaagtagaaaaattatctttgaaatatatgcggttacttttgaccaattaattattacaccactttttaata 37564779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 567
Target Start/End: Original strand, 9791864 - 9791960
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 567  Q
    ||||||| ||| |||| ||||||| ||||| |||||||||||| || ||||||  |||||||||||| |  |||||||||||||||||| | ||||||    
T  9791864 aaggaatccaagaata-aaaaattgtcttgaaaatataaactgctatttttgatcaactaattattatatcactttttaataaaatcttacttctttt 9791960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 537
Target Start/End: Original strand, 13904055 - 13904105
Alignment:
Q  487 aaaaattatcttggaaatataaactgttacttttgactaactaattattac 537  Q
    ||||||| ||||| ||||||||||||||| ||||||| |||||||||||||    
T  13904055 aaaaattgtcttgaaaatataaactgttatttttgaccaactaattattac 13904105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 12201898 - 12201850
Alignment:
Q  474 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttga 522  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  12201898 aattcaaaaatagaaattttgtcttggaaatataagctgttacttttga 12201850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 12446326 - 12446278
Alignment:
Q  474 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttga 522  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  12446326 aattcaaaaatagaaattttgtcttggaaatataagctgttacttttga 12446278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4052534 - 4052503
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  4052534 tttttgtcccacgtacaagttgtctaaaatac 4052503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8673106 - 8673137
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  8673106 tttttgtcccacgtacaagttgtctaaaatac 8673137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 14005095 - 14005126
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  14005095 tttttgtcccacgtacaagttgtctaaaatac 14005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21272738 - 21272707
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  21272738 tttttgtcccacgtacaagttgtctaaaatac 21272707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29563277 - 29563308
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  29563277 tttttgtcccacgtacaagttgtctaaaatac 29563308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32303636 - 32303667
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  32303636 tttttgtcccacgtacaagttgtctaaaatac 32303667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 34063182 - 34063151
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  34063182 tttttgtcccacgtacaagttgtctaaaatac 34063151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37664334 - 37664365
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  37664334 tttttgtcccacgtacaagttgtctaaaatac 37664365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45446509 - 45446478
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  45446509 tttttgtcccacgtacaagttgtctaaaatac 45446478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10467118 - 10467088
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  10467118 tttttgtcccacgtacaagttgtctaaaata 10467088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 27104013 - 27103983
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  27104013 tttttgtcccacgtacaagttgtctaaaata 27103983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 41548672 - 41548642
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  41548672 tttttgtcccacgtacaagttgtctaaaata 41548642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 22999205 - 22999153
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| |||||||||||||| |||| || |||| ||||||||    
T  22999205 tgttctcccttgtattgtgctgttctttcttgtactgttttgtattgtacttg 22999153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 574
Target Start/End: Original strand, 19994924 - 19995025
Alignment:
Q  473 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 572  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||| ||||||||| |||    
T  19994924 gaatccaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacatcactttttaataaatgcttacctcttttaactg 19995023  T
Q  573 ct 574  Q
    ||    
T  19995024 ct 19995025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 462 - 569
Target Start/End: Complemental strand, 36622222 - 36622114
Alignment:
Q  462 cattggtcaaggaattcaaaaa-tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgc 560  Q
    ||||||| |||||||  ||||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |    
T  36622222 cattggttaaggaataaaaaaagtagaaaaattgtcttagaaatataaactattacttttgactaactaattattacacaactttttaataaaatcttac 36622123  T
Q  561 ctcttttag 569  Q
    |||||||||    
T  36622122 ctcttttag 36622114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 574
Target Start/End: Complemental strand, 41385149 - 41385045
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| |||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||| |||  |||||| |||||||| || | ||||||||    
T  41385149 aaggaatccaaaaatagaaaaattgtattggaaatataaattgttacttttgaccaactaattatcacaccacttttcaataaaatattacttcttttag 41385050  T
Q  570 ctgct 574  Q
    |||||    
T  41385049 ctgct 41385045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 470 - 573
Target Start/End: Complemental strand, 43248811 - 43248708
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| ||||| |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||  | ||||| |||||||||| | |||||||     
T  43248811 aaggaatccaaaagtagaaaaattgtcttagaaatataaactgttacttttgaccaactaattattacaccaatttttgataaaatcttacttcttttat 43248712  T
Q  570 ctgc 573  Q
    ||||    
T  43248711 ctgc 43248708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 574
Target Start/End: Original strand, 16498137 - 16498214
Alignment:
Q  497 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  16498137 ttggaaatataaattgttaattttgactaactaattattacatcactttttaataaaatcttacctcttttaactgct 16498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 571
Target Start/End: Original strand, 19606282 - 19606375
Alignment:
Q  478 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagct 571  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||| | ||| ||||||    
T  19606282 caaaagtagaaaaactattttggaaatataaactgttacttttgatgaactaattattacaccactttttaataaaatcttacatctcttagct 19606375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 465 - 574
Target Start/End: Complemental strand, 35501515 - 35501406
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 564  Q
    |||| ||||| | ||||| ||||||||||   ||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||| | |||    
T  35501515 tggttaaggattccaaaagtagaaaaattgatttggaaatataaacttttatttttgactaactaattattacatcactttttaataaaatcttacttct 35501416  T
Q  565 tttagctgct 574  Q
    |||| |||||    
T  35501415 tttacctgct 35501406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 538
Target Start/End: Original strand, 40664663 - 40664723
Alignment:
Q  478 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 538  Q
    ||||| || ||||||| |||||||||||||||||||||||||||   ||||||||| ||||    
T  40664663 caaaagtaaaaaaattgtcttggaaatataaactgttacttttggtcaactaattactaca 40664723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 5278870 - 5278901
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  5278870 tttttgtcccacgtacaagttgtctaaaatac 5278901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9717278 - 9717247
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  9717278 tttttgtcccacgtacaagttgtctaaaatac 9717247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17540769 - 17540738
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  17540769 tttttgtcccacgtacaagttgtctaaaatac 17540738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19513725 - 19513756
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  19513725 tttttgtcccacgtacaagttgtctaaaatac 19513756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26418977 - 26418946
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  26418977 tttttgtcccacgtacaagttgtctaaaatac 26418946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32497969 - 32497938
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  32497969 tttttgtcccacgtacaagttgtctaaaatac 32497938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33889297 - 33889266
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  33889297 tttttgtcccacgtacaagttgtctaaaatac 33889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35114839 - 35114808
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  35114839 tttttgtcccacgtacaagttgtctaaaatac 35114808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35473036 - 35473067
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  35473036 tttttgtcccacgtacaagttgtctaaaatac 35473067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 38993107 - 38993138
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  38993107 tttttgtcccacgtacaagttgtctaaaatac 38993138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1247201 - 1247171
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  1247201 tttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 9732966 - 9732996
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  9732966 tttttgtcccacgtacaagttgtctaaaata 9732996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 18685890 - 18685860
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  18685890 tttttgtcccacgtacaagttgtctaaaata 18685860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 40692351 - 40692321
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  40692351 tttttgtcccacgtacaagttgtctaaaata 40692321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 547
Target Start/End: Complemental strand, 18717972 - 18717883
Alignment:
Q  458 gagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaacttttt 547  Q
    ||||||||||| |||||||| | |||||||||  |||| ||  ||||||||  ||||||||||||  || |||| |||||| ||||||||    
T  18717972 gagacattggttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaacttttt 18717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 6896222 - 6896194
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  6896222 tttttgtcccacgtacaagttgtctaaaa 6896194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 550
Target Start/End: Complemental strand, 27896561 - 27896493
Alignment:
Q  482 aatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaat 550  Q
    ||||||||| || | || ||||||||| ||||||||||||| | | |||| |||||| |||||||||||    
T  27896561 aatagaaaatttgttttagaaatataagctgttacttttgatttagtaataattacacaactttttaat 27896493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 434 - 574
Target Start/End: Complemental strand, 29458179 - 29458040
Alignment:
Q  434 gggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatta 533  Q
    |||||||||||||||||| | ||| || || |||| |||||||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  29458179 gggtcttgttaactagtgccccgg-aggcactggttaaggaatctaaaagtagaaaaattgtcttggaaatataaactgttatttttgactaactaatta 29458081  T
Q  534 ttacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    |||||  ||||||||||||||| ||  ||||||||||||||    
T  29458080 ttacaccactttttaataaaatattatctcttttagctgct 29458040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 470 - 569
Target Start/End: Complemental strand, 20585915 - 20585816
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||    
T  20585915 aaggaattcaaaagtagaaaaattgttttggaaatataaactgttacttttgattaactaattattacaccactttttaataaaatcttacctcttttag 20585816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 470 - 574
Target Start/End: Original strand, 26835700 - 26835804
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||||||||| |||||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |  ||||||||||||||| ||  |||||||||    
T  26835700 aaggaattcaaaagtagaaaaattgtcttgaaaatataaattgttacttttgattaactaattattatatcactttttaataaaattttaactcttttag 26835799  T
Q  570 ctgct 574  Q
    |||||    
T  26835800 ctgct 26835804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 474 - 568
Target Start/End: Complemental strand, 45054493 - 45054399
Alignment:
Q  474 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 568  Q
    ||||||||| |||||||||| | || |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| | |||||||    
T  45054493 aattcaaaagtagaaaaattgtgttagaaatataaactgttacttttgactaactaattattacactattttttaataaaatcttacttctttta 45054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 435 - 574
Target Start/End: Original strand, 49452577 - 49452713
Alignment:
Q  435 ggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattat 534  Q
    |||||||||||| |||||| ||||   ||||||| || ||||  |||  |||||||||| | ||| ||||||||||||||| ||||||||||||||||||    
T  49452577 ggtcttgttaaccagtgtcccgggg--cattggttaaagaatctaaatgtagaaaaattgttttgaaaatataaactgtta-ttttgactaactaattat 49452673  T
Q  535 tacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||  | ||||||||||| |||| ||||||||| |||||    
T  49452674 tacatcattttttaataaattcttacctcttttaactgct 49452713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 470 - 571
Target Start/End: Complemental strand, 14622204 - 14622103
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| |||||||||||||||| | ||| ||||||||| ||||||||||||| |||||||| | |||  |||||| |||||||| || | ||||||||    
T  14622204 aaggaatccaaaaatagaaaaattgtattgaaaatataaattgttacttttgaccaactaattttcacaccacttttcaataaaatattacttcttttag 14622105  T
Q  570 ct 571  Q
    ||    
T  14622104 ct 14622103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 558
Target Start/End: Original strand, 30863629 - 30863717
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    ||||||||||||| |||||||||| ||||  ||||||||| ||||| |||| |||||| ||||||||||  |||||| |||||||||||    
T  30863629 aaggaattcaaaagtagaaaaattgtcttcaaaatataaattgttatttttaactaacaaattattacaccacttttcaataaaatctt 30863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 32961247 - 32961187
Alignment:
Q  514 tacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  32961247 tactttttactaactaattattacaccactttttaataaaatcttacctcttttagctgct 32961187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 470 - 558
Target Start/End: Complemental strand, 35483705 - 35483617
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    ||||||||||||| |||||||| | ||||  ||||||||||| ||||||||||  |||||||||||||   ||| ||||||||||||||    
T  35483705 aaggaattcaaaagtagaaaaactgtcttacaaatataaacttttacttttgatcaactaattattactccactctttaataaaatctt 35483617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 32961551 - 32961504
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttact 517  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  32961551 aaggaatccaaaagtagaaaaattatcttggaaatataaactgttact 32961504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 48338930 - 48338839
Alignment:
Q  463 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||| || ||||| | |||||||||  |||||||||||||||||  ||||| ||||||  || ||||||||||| |||||||| ||||||    
T  48338930 attggttaaagaatttataaatagaaattttatcttggaaatataagatgttatttttgataaagtaattattacacaacttttttataaaa 48338839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 493 - 554
Target Start/End: Original strand, 17109561 - 17109622
Alignment:
Q  493 tatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    ||||||||||||||||||||| || ||| | ||| |||| |||||| |||||||||||||||    
T  17109561 tatcttggaaatataaactgtaacattttattaagtaataattacataactttttaataaaa 17109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 31883157 - 31883210
Alignment:
Q  106 ttgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    |||||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  31883157 ttgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 31883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3864705 - 3864736
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  3864705 tttttgtcccacgtacaagttgtctaaaatac 3864736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4851486 - 4851517
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  4851486 tttttgtcccacgtacaagttgtctaaaatac 4851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 20609678 - 20609709
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  20609678 tttttgtcccacgtacaagttgtctaaaatac 20609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21373985 - 21373954
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  21373985 tttttgtcccacgtacaagttgtctaaaatac 21373954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 25927357 - 25927388
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  25927357 tttttgtcccacgtacaagttgtctaaaatac 25927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28675845 - 28675814
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  28675845 tttttgtcccacgtacaagttgtctaaaatac 28675814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29584930 - 29584899
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  29584930 tttttgtcccacgtacaagttgtctaaaatac 29584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 34026722 - 34026691
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  34026722 tttttgtcccacgtacaagttgtctaaaatac 34026691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 558
Target Start/End: Complemental strand, 36436701 - 36436606
Alignment:
Q  463 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    |||||| ||| |||| |||||||||||   | ||||| ||||||||||| ||| ||||||  || |||||||| ||  ||||||||||||||||||    
T  36436701 attggttaagcaatttaaaaatagaaattatgtcttgtaaatataaacttttatttttgatcaaataattattgcactactttttaataaaatctt 36436606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38213409 - 38213378
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  38213409 tttttgtcccacgtacaagttgtctaaaatac 38213378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39052868 - 39052899
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  39052868 tttttgtcccacgtacaagttgtctaaaatac 39052899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39215499 - 39215530
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  39215499 tttttgtcccacgtacaagttgtctaaaatac 39215530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 42636433 - 42636464
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  42636433 tttttgtcccacgtacaagttgtctaaaatac 42636464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44116994 - 44116963
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  44116994 tttttgtcccacgtacaagttgtctaaaatac 44116963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 47958462 - 47958493
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  47958462 tttttgtcccacgtacaagttgtctaaaatac 47958493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 555
Target Start/End: Original strand, 49419085 - 49419140
Alignment:
Q  500 gaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 555  Q
    |||||||||| ||| |||||| | |||||||| |||||| ||||||||||||||||    
T  49419085 gaaatataaattgtcactttttattaactaataattacataactttttaataaaat 49419140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 51259810 - 51259841
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  51259810 tttttgtcccacgtacaagttgtctaaaatac 51259841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 3695323 - 3695353
Alignment:
Q  2 ttttgtcccacgtacaagttgtctaaaatac 32  Q
    |||||||||||||||||||||||||||||||    
T  3695323 ttttgtcccacgtacaagttgtctaaaatac 3695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 554
Target Start/End: Complemental strand, 4020218 - 4020124
Alignment:
Q  460 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||| |||| |||||||  | |||||||||  || ||||| ||||||||| ||||| |||||| ||| ||||||||||| || ||||| ||||||    
T  4020218 gacaatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaa 4020124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31883052 - 31883082
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  31883052 tttttgtcccacgtacaagttgtctaaaata 31883082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 553
Target Start/End: Original strand, 44291258 - 44291316
Alignment:
Q  495 tcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaa 553  Q
    ||||||||||||||||||| |||||| | ||| |||| ||||||  |||||||||||||    
T  44291258 tcttggaaatataaactgtcactttttattaagtaataattacattactttttaataaa 44291316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 50386592 - 50386644
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| ||||||||||| || |||| || |||||||||||||    
T  50386592 tgttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttg 50386644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 470 - 574
Target Start/End: Original strand, 17900748 - 17900852
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||     
T  17900748 aaggaatccaaaagtagaaaaattgtcttggagatataaactcttacttttgactaactaattattacaccactttttaataaaatcttacctcttttaa 17900847  T
Q  570 ctgct 574  Q
    |||||    
T  17900848 ctgct 17900852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 574
Target Start/End: Complemental strand, 11102020 - 11101906
Alignment:
Q  460 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttg 559  Q
    |||| |||| ||||||| ||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||     
T  11102020 gacactggttaaggaatccaaaagtagaaaaattatcttaaaaatataaacagttacttttgactaactaattattaaactactttttaataaaatctta 11101921  T
Q  560 cctcttttagctgct 574  Q
    |||||||||| ||||    
T  11101920 cctcttttagttgct 11101906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 470 - 574
Target Start/End: Original strand, 26608910 - 26609013
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    |||||||  ||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||  ||||||||     
T  26608910 aaggaatctaaaaata-aaaagttgtcttgaaaatataaactgttacttttgactagctaattattacatcactttttaataaaatcttatctcttttaa 26609008  T
Q  570 ctgct 574  Q
    |||||    
T  26609009 ctgct 26609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 465 - 567
Target Start/End: Complemental strand, 19418710 - 19418608
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 564  Q
    |||| ||||||| ||||| || ||||||| ||||  ||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||| | |||    
T  19418710 tggttaaggaatccaaaagtaaaaaaattgtcttaaaaatataaactgttacttttgaccagctaattattacatcactttttaataaaatcttacttct 19418611  T
Q  565 ttt 567  Q
    |||    
T  19418610 ttt 19418608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 567
Target Start/End: Complemental strand, 10253067 - 10252979
Alignment:
Q  479 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 567  Q
    |||| |||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||| | ||||||    
T  10253067 aaaagtagaaaaactgtcttgaaaatataaactgttatttttgactaactaattattacatcattttttaataaaatcttacttctttt 10252979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 574
Target Start/End: Original strand, 22297584 - 22297684
Alignment:
Q  473 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 572  Q
    ||||||| || |||||||||| ||||| |||||||||  |||||||||||| ||||||||||||||  || |||||||||||| || | |||||||||||    
T  22297584 gaattcagaagtagaaaaattgtcttgaaaatataaatcgttacttttgacaaactaattattacaccac-ttttaataaaattttacttcttttagctg 22297682  T
Q  573 ct 574  Q
    ||    
T  22297683 ct 22297684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 1970647 - 1970706
Alignment:
Q  460 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttt 519  Q
    |||| |||| ||| |||| |||||||| |||||||||||| |||||||||||||||||||    
T  1970647 gacactggttaagaaatttaaaaatagtaaaattatcttgaaaatataaactgttacttt 1970706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 492 - 554
Target Start/End: Complemental strand, 18493331 - 18493269
Alignment:
Q  492 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||| ||||||||| ||||||||||||  || ||||||||||| |||||||| ||||||    
T  18493331 ttatcttgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaa 18493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 34301963 - 34301869
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaa-ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    |||| |||||||||||||||| ||||| |||| |   || ||||||||||||  |||||| |||||||||||| |  ||||||||||||||||||    
T  34301963 tggttaaggaattcaaaaataaaaaaaattatttaaaaattataaactgttatgtttgaccaactaattattataccactttttaataaaatctt 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 166998 - 167029
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  166998 tttttgtcccacgtacaagttgtctaaaatac 167029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2614950 - 2614919
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  2614950 tttttgtcccacgtacaagttgtctaaaatac 2614919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3932882 - 3932913
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  3932882 tttttgtcccacgtacaagttgtctaaaatac 3932913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4494190 - 4494221
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  4494190 tttttgtcccacgtacaagttgtctaaaatac 4494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9902733 - 9902764
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  9902733 tttttgtcccacgtacaagttgtctaaaatac 9902764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10960054 - 10960023
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  10960054 tttttgtcccacgtacaagttgtctaaaatac 10960023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17443316 - 17443285
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  17443316 tttttgtcccacgtacaagttgtctaaaatac 17443285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18057573 - 18057542
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18057573 tttttgtcccacgtacaagttgtctaaaatac 18057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24203416 - 24203385
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  24203416 tttttgtcccacgtacaagttgtctaaaatac 24203385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24242718 - 24242687
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  24242718 tttttgtcccacgtacaagttgtctaaaatac 24242687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10485211 - 10485181
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  10485211 tttttgtcccacgtacaagttgtctaaaata 10485181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 31870271 - 31870325
Alignment:
Q  97 tgtcatttattgttctcccttatattttgctgttctttcttatactattatgtac 151  Q
    |||||| | ||||||||||||||||| || ||||||||||| |||| ||||||||    
T  31870271 tgtcatgtgttgttctcccttatattgtgttgttctttcttgtactgttatgtac 31870325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 32132455 - 32132485
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  32132455 tttttgtcccacgtacaagttgtctaaaata 32132485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 8e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 433 - 574
Target Start/End: Complemental strand, 5178881 - 5178741
Alignment:
Q  433 agggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatt 532  Q
    |||||||||||||| | || ||| || |||| | || ||||||| ||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  5178881 agggtcttgttaaccaatgcctccgg-gacactcgttaaggaatccaaaagtagaaaaattgtcttggaaacataaactgttactttttactaactaatt 5178783  T
Q  533 attacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||  ||||||||||||||| || ||| |||||||||||    
T  5178782 attacaccactttttaataaaattttacctattttagctgct 5178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 470 - 574
Target Start/End: Complemental strand, 11803018 - 11802914
Alignment:
Q  470 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 569  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||   ||||||||    
T  11803018 aaggaatccaaaagtagaaaaattgttttggaaatataaactgttacttttgactaactaattattacattactttttaataaattctttagtcttttag 11802919  T
Q  570 ctgct 574  Q
    |||||    
T  11802918 ctgct 11802914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 479 - 566
Target Start/End: Complemental strand, 48502667 - 48502580
Alignment:
Q  479 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttt 566  Q
    |||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  48502667 aaaagtagaaaaattgtcttgaaaatataagctgttacttttgactaactaattattacacaactttttaataaaattttacctcttt 48502580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 574
Target Start/End: Complemental strand, 52112492 - 52112357
Alignment:
Q  436 gtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattatt 535  Q
    |||||||||||||||| | ||||  ||  |||| ||||||| || |  |||||||||| |||| |||| |||||| ||||||||| ||||||||| ||||    
T  52112492 gtcttgttaactagtgccccggggtac--tggttaaggaatccataggtagaaaaattgtctttgaaacataaacggttactttt-actaactaactatt 52112396  T
Q  536 acagaactttttaataaaatcttgcctcttttagctgct 574  Q
    |||  ||||||||||||||||||  ||||||||||||||    
T  52112395 acaccactttttaataaaatcttttctcttttagctgct 52112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 462 - 574
Target Start/End: Complemental strand, 13643692 - 13643581
Alignment:
Q  462 cattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcc 561  Q
    ||||||| |||||||||| || || ||||||| ||||| |||||||||| |||||||||||| || |||||||||||  || |||||||||||| ||       
T  13643692 cattggttaaggaattcataagtaaaaaaattgtcttgaaaatataaaccgttacttttgacaaattaattattacaccac-ttttaataaaattttatt 13643594  T
Q  562 tcttttagctgct 574  Q
    |||||||||||||    
T  13643593 tcttttagctgct 13643581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 25161449 - 25161506
Alignment:
Q  500 gaaatataaactgttacttttgactaactaattattacagaactttttaataaaatct 557  Q
    ||||||||||||||||  ||| |||||||||||||||||  |||||||||||||||||    
T  25161449 gaaatataaactgttatattttactaactaattattacaccactttttaataaaatct 25161506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 574
Target Start/End: Complemental strand, 50295322 - 50295245
Alignment:
Q  497 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||||||||||||||| |||| || ||||||||||||||  | |||||| ||||||||  | |||||||||||||    
T  50295322 ttggaaatataaactgttatttttaaccaactaattattacaacattttttactaaaatctcacttcttttagctgct 50295245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 567
Target Start/End: Original strand, 2356382 - 2356477
Alignment:
Q  471 aggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 567  Q
    |||||| ||||| || ||||||| ||||  ||||||||| ||||| ||||||| ||||||| |||||| ||||||| ||||||||||| | ||||||    
T  2356382 aggaatccaaaagtaaaaaaattgtcttaaaaatataaattgttatttttgaccaactaat-attacacaacttttaaataaaatcttacttctttt 2356477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 42512987 - 42513041
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttgtt 161  Q
    ||||||||||| |||| |||||||||||||| |||| || |||||||||||||||    
T  42512987 tgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgtt 42513041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 38663090 - 38663037
Alignment:
Q  106 ttgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||||||||| || ||||||||||| |||| || |||||||||||||    
T  38663090 ttgttctcccttatattgtgttgttctttcttgtactgttttgtactgtacttg 38663037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 50304608 - 50304556
Alignment:
Q  107 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 159  Q
    ||||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  50304608 tgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 50304556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 844835 - 844866
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  844835 tttttgtcccacgtacaagttgtctaaaatac 844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1351546 - 1351577
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  1351546 tttttgtcccacgtacaagttgtctaaaatac 1351577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6711157 - 6711188
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  6711157 tttttgtcccacgtacaagttgtctaaaatac 6711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 16386917 - 16386886
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  16386917 tttttgtcccacgtacaagttgtctaaaatac 16386886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 16476266 - 16476297
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  16476266 tttttgtcccacgtacaagttgtctaaaatac 16476297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17888011 - 17887980
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  17888011 tttttgtcccacgtacaagttgtctaaaatac 17887980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26764906 - 26764937
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  26764906 tttttgtcccacgtacaagttgtctaaaatac 26764937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 30105791 - 30105822
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  30105791 tttttgtcccacgtacaagttgtctaaaatac 30105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 31004195 - 31004164
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  31004195 tttttgtcccacgtacaagttgtctaaaatac 31004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42510588 - 42510557
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  42510588 tttttgtcccacgtacaagttgtctaaaatac 42510557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 45490986 - 45491017
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  45490986 tttttgtcccacgtacaagttgtctaaaatac 45491017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50540407 - 50540376
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  50540407 tttttgtcccacgtacaagttgtctaaaatac 50540376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 16437425 - 16437395
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  16437425 tttttgtcccacgtacaagttgtctaaaata 16437395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38663195 - 38663165
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  38663195 tttttgtcccacgtacaagttgtctaaaata 38663165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 44738153 - 44738183
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  44738153 tttttgtcccacgtacaagttgtctaaaata 44738183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 13969113 - 13969186
Alignment:
Q  481 aaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||||  || ||||| ||||||||| |||||||||| | ||| ||||||||||| || ||||| ||||||    
T  13969113 aaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaa 13969186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 554
Target Start/End: Original strand, 15419681 - 15419738
Alignment:
Q  497 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||||||||||||||||||| | ||| |||| |||| |  ||||||||||||||    
T  15419681 ttggaaatataaactgttactttttattaagtaataattatattactttttaataaaa 15419738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Original strand, 44109097 - 44109158
Alignment:
Q  493 tatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||||||||||||||||||||  ||||| | ||| |||| ||||||  ||||||||||||||    
T  44109097 tatcttggaaatataaactgtccctttttattaagtaataattacattactttttaataaaa 44109158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 6029412 - 6029440
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  6029412 tttttgtcccacgtacaagttgtctaaaa 6029440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 50382514 - 50382542
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  50382514 tttttgtcccacgtacaagttgtctaaaa 50382542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 434 - 574
Target Start/End: Complemental strand, 35557027 - 35556890
Alignment:
Q  434 gggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatta 533  Q
    ||||||||||||| |||| ||||  ||||||| || |  |||||||||| |||||||||| ||||| ||||||||||||  | |||||||||||||||||    
T  35557027 gggtcttgttaaccagtgcctcg--agacatttgttacagaattcaaaagtagaaaaattgtcttgaaaatataaactgccatttttgactaactaatta 35556930  T
Q  534 ttacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    |||||  || |||||||||| |||| |||||||||| ||||    
T  35556929 ttacaccac-ttttaataaattcttacctcttttagttgct 35556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 465 - 574
Target Start/End: Complemental strand, 19129838 - 19129728
Alignment:
Q  465 tggtcaaggaattcaaaaa-tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctc 563  Q
    |||| ||||||| |||||| || ||||||| | |||||||||||||| | |||||||||||||||||||||||    | |||||||||||||||| ||||    
T  19129838 tggttaaggaatccaaaaagtaaaaaaattgtattggaaatataaacagctacttttgactaactaattattaatccattttttaataaaatcttacctc 19129739  T
Q  564 ttttagctgct 574  Q
    ||||| |||||    
T  19129738 ttttatctgct 19129728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 434 - 532
Target Start/End: Complemental strand, 26139807 - 26139710
Alignment:
Q  434 gggtcttgttaactagtgtc-tcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatt 532  Q
    ||||||||||||| |||| | |||||| ||  |||| ||||||| ||||| |||||||| | |||||||||||||| | |||||||||||||||||||||    
T  26139807 gggtcttgttaaccagtgccctcgggatac--tggttaaggaatccaaaagtagaaaaactgtcttggaaatataaccggttacttttgactaactaatt 26139710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 558
Target Start/End: Complemental strand, 8435151 - 8435079
Alignment:
Q  486 gaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 558  Q
    |||||||| ||||||||||||||| ||| ||||||||| ||||||| |||| |  | ||||||||||||||||    
T  8435151 gaaaaattgtcttggaaatataaagtgtaacttttgaccaactaataattataccattttttaataaaatctt 8435079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 553451 - 553420
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  553451 tttttgtcccacgtacaagttgtctaaaatac 553420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2351734 - 2351703
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  2351734 tttttgtcccacgtacaagttgtctaaaatac 2351703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3735411 - 3735380
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  3735411 tttttgtcccacgtacaagttgtctaaaatac 3735380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4818182 - 4818213
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  4818182 tttttgtcccacgtacaagttgtctaaaatac 4818213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7523226 - 7523195
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  7523226 tttttgtcccacgtacaagttgtctaaaatac 7523195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 21739203 - 21739234
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  21739203 tttttgtcccacgtacaagttgtctaaaatac 21739234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28090562 - 28090593
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  28090562 tttttgtcccacgtacaagttgtctaaaatac 28090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 31644500 - 31644469
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  31644500 tttttgtcccacgtacaagttgtctaaaatac 31644469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32528769 - 32528738
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  32528769 tttttgtcccacgtacaagttgtctaaaatac 32528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 39788247 - 39788216
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  39788247 tttttgtcccacgtacaagttgtctaaaatac 39788216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 10569060 - 10568975
Alignment:
Q  465 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaata 551  Q
    |||| ||||||| ||||| || ||||||| ||||  ||||||||||| |||||||||||  ||| |||||||||  |||||||||||    
T  10569060 tggttaaggaatccaaaagtaaaaaaattgtcttaaaaatataaacttttacttttgaccgact-attattacaccactttttaata 10568975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 24327 - 24240
Alignment:
Q  487 aaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 574  Q
    ||||||| | |||||||||||| || ||| ||||||| |||||||||| |||  |  ||||||||||||||| | |||||||||||||    
T  24327 aaaaattgtgttggaaatataaccttttatttttgaccaactaattatcacaccagcttttaataaaatcttacttcttttagctgct 24240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2380 - 2411
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  2380 tttttgtcccacgtacaagttgtctaaaatac 2411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19132 - 19163
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  19132 tttttgtcccacgtacaagttgtctaaaatac 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12578 - 12609
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  12578 tttttgtcccacgtacaagttgtctaaaatac 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18096 - 18127
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18096 tttttgtcccacgtacaagttgtctaaaatac 18127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23629 - 23598
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  23629 tttttgtcccacgtacaagttgtctaaaatac 23598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 102003 - 101972
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  102003 tttttgtcccacgtacaagttgtctaaaatac 101972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 373006 - 373037
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaatac 32  Q
    ||||||||||||||||||||||||||||||||    
T  373006 tttttgtcccacgtacaagttgtctaaaatac 373037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 554
Target Start/End: Original strand, 1098 - 1192
Alignment:
Q  460 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 554  Q
    |||| |||||||| |||| | ||||||||   || ||||| ||||||||||||| |||||| | ||| |||| ||||||  ||||||||||||||    
T  1098 gacactggtcaagaaatttataaatagaatttttttcttgaaaatataaactgtcactttttattaagtaataattacattactttttaataaaa 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 51493 - 51463
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  51493 tttttgtcccacgtacaagttgtctaaaata 51463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 1685 - 1713
Alignment:
Q  1 tttttgtcccacgtacaagttgtctaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  1685 tttttgtcccacgtacaagttgtctaaaa 1713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University