View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9011_low_1 (Length: 1266)

Name: NF9011_low_1
Description: NF9011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9011_low_1
NF9011_low_1
[»] chr7 (83 HSPs)
chr7 (748-1248)||(1703588-1704102)
chr7 (20-309)||(1703177-1703475)
chr7 (416-602)||(47953217-47953403)
chr7 (416-601)||(38301371-38301556)
chr7 (420-601)||(43368229-43368410)
chr7 (418-602)||(21784898-21785082)
chr7 (416-599)||(43158568-43158751)
chr7 (416-602)||(10932439-10932625)
chr7 (416-602)||(26994107-26994293)
chr7 (417-602)||(3922586-3922771)
chr7 (416-602)||(43189124-43189310)
chr7 (418-602)||(11321769-11321953)
chr7 (411-602)||(40753182-40753373)
chr7 (416-602)||(26371691-26371877)
chr7 (416-602)||(36769451-36769637)
chr7 (420-602)||(41211086-41211268)
chr7 (416-602)||(46633724-46633905)
chr7 (416-602)||(1363663-1363849)
chr7 (416-582)||(11250664-11250830)
chr7 (416-602)||(18386552-18386737)
chr7 (418-602)||(20127316-20127500)
chr7 (418-602)||(44748722-44748906)
chr7 (416-602)||(9913552-9913737)
chr7 (416-602)||(9927240-9927425)
chr7 (416-598)||(47316580-47316762)
chr7 (416-601)||(1870163-1870348)
chr7 (423-602)||(18470711-18470888)
chr7 (416-599)||(17237106-17237289)
chr7 (416-601)||(34295293-34295471)
chr7 (416-602)||(30849128-30849314)
chr7 (416-588)||(48894758-48894930)
chr7 (416-602)||(29661350-29661535)
chr7 (418-599)||(329500-329687)
chr7 (420-602)||(43213811-43213993)
chr7 (416-593)||(16963174-16963351)
chr7 (414-602)||(32873652-32873837)
chr7 (416-602)||(26910293-26910478)
chr7 (416-602)||(34519535-34519721)
chr7 (416-581)||(11822271-11822436)
chr7 (421-599)||(37967004-37967182)
chr7 (458-602)||(23349215-23349359)
chr7 (411-599)||(46448521-46448709)
chr7 (416-602)||(22723914-22724100)
chr7 (416-599)||(48445551-48445734)
chr7 (417-535)||(26700571-26700689)
chr7 (434-602)||(21133399-21133567)
chr7 (432-602)||(22724429-22724599)
chr7 (473-602)||(30598947-30599076)
chr7 (1035-1144)||(19777924-19778033)
chr7 (422-602)||(3891930-3892094)
chr7 (530-601)||(26652894-26652965)
chr7 (1040-1144)||(26203022-26203126)
chr7 (415-601)||(15035132-15035320)
chr7 (499-600)||(34117481-34117581)
chr7 (1052-1125)||(11740376-11740449)
chr7 (1040-1108)||(11736139-11736207)
chr7 (522-602)||(41665563-41665643)
chr7 (324-374)||(1703500-1703550)
chr7 (1054-1128)||(7833761-7833835)
chr7 (416-538)||(41223278-41223400)
chr7 (1055-1144)||(48984381-48984469)
chr7 (500-601)||(46408917-46409021)
chr7 (411-509)||(41665475-41665573)
chr7 (433-602)||(21408526-21408694)
chr7 (455-591)||(2048989-2049125)
chr7 (527-602)||(48699425-48699500)
chr7 (1083-1144)||(11736212-11736273)
chr7 (527-600)||(29372772-29372845)
chr7 (416-496)||(16027809-16027889)
chr7 (677-729)||(26652766-26652818)
chr7 (527-602)||(22631765-22631840)
chr7 (868-976)||(22716511-22716621)
chr7 (411-497)||(28459531-28459617)
chr7 (676-733)||(38301244-38301301)
chr7 (565-602)||(47947787-47947824)
chr7 (1040-1108)||(38448363-38448430)
chr7 (677-729)||(43368101-43368153)
chr7 (523-602)||(8360580-8360658)
chr7 (1062-1124)||(16563495-16563557)
chr7 (1062-1124)||(16602105-16602167)
chr7 (1062-1124)||(37928326-37928388)
chr7 (412-461)||(7958747-7958796)
chr7 (419-468)||(29773522-29773571)
[»] chr3 (79 HSPs)
chr3 (416-601)||(31882897-31883082)
chr3 (416-601)||(50386331-50386516)
chr3 (411-601)||(33364648-33364838)
chr3 (414-602)||(51259653-51259841)
chr3 (421-602)||(24571305-24571486)
chr3 (416-602)||(12349046-12349232)
chr3 (416-602)||(20255069-20255254)
chr3 (417-602)||(29584899-29585084)
chr3 (418-602)||(39052715-39052899)
chr3 (411-602)||(40094527-40094718)
chr3 (432-602)||(25860312-25860482)
chr3 (417-602)||(44116963-44117148)
chr3 (416-602)||(2135094-2135280)
chr3 (416-602)||(21373954-21374140)
chr3 (416-602)||(28675814-28676000)
chr3 (416-602)||(49748786-49748972)
chr3 (416-602)||(50678822-50679008)
chr3 (421-602)||(1344587-1344768)
chr3 (416-563)||(41682928-41683075)
chr3 (416-602)||(25927202-25927388)
chr3 (416-602)||(42636278-42636464)
chr3 (416-593)||(51925083-51925260)
chr3 (418-602)||(3964312-3964496)
chr3 (426-602)||(34026691-34026867)
chr3 (416-602)||(21221236-21221421)
chr3 (416-599)||(3867524-3867707)
chr3 (416-602)||(29646090-29646276)
chr3 (416-602)||(38213378-38213564)
chr3 (418-599)||(19906789-19906970)
chr3 (437-602)||(20609544-20609709)
chr3 (417-602)||(47958308-47958493)
chr3 (416-602)||(3864552-3864736)
chr3 (411-602)||(53557665-53557856)
chr3 (422-602)||(54622678-54622857)
chr3 (416-602)||(51296605-51296789)
chr3 (416-602)||(3695182-3695353)
chr3 (415-599)||(24721512-24721696)
chr3 (416-602)||(22484618-22484804)
chr3 (414-602)||(4851336-4851517)
chr3 (416-601)||(5442316-5442489)
chr3 (420-563)||(10747263-10747406)
chr3 (416-602)||(45690781-45690962)
chr3 (416-578)||(6179473-6179636)
chr3 (1004-1144)||(29458040-29458179)
chr3 (1040-1139)||(20585816-20585915)
chr3 (416-512)||(43175589-43175685)
chr3 (472-602)||(26282315-26282448)
chr3 (421-602)||(26847350-26847532)
chr3 (1040-1144)||(26835700-26835804)
chr3 (432-599)||(52300464-52300633)
chr3 (1044-1138)||(45054399-45054493)
chr3 (476-601)||(34351303-34351428)
chr3 (416-602)||(8253698-8253883)
chr3 (476-602)||(39215404-39215530)
chr3 (424-602)||(44000285-44000462)
chr3 (433-602)||(32768616-32768786)
chr3 (1005-1144)||(49452577-49452713)
chr3 (1040-1141)||(14622103-14622204)
chr3 (1040-1128)||(30863629-30863717)
chr3 (1084-1144)||(32961187-32961247)
chr3 (421-602)||(44267766-44267941)
chr3 (1040-1128)||(35483617-35483705)
chr3 (1040-1087)||(32961504-32961551)
chr3 (475-534)||(53046605-53046664)
chr3 (523-602)||(8648539-8648618)
chr3 (475-602)||(17264606-17264733)
chr3 (1033-1124)||(48338839-48338930)
chr3 (1063-1124)||(17109561-17109622)
chr3 (676-729)||(31883157-31883210)
chr3 (416-602)||(25395638-25395824)
chr3 (571-602)||(32621893-32621924)
chr3 (422-465)||(33841740-33841783)
chr3 (1033-1128)||(36436606-36436701)
chr3 (1070-1125)||(49419085-49419140)
chr3 (1030-1124)||(4020124-4020218)
chr3 (523-601)||(14155443-14155520)
chr3 (1065-1123)||(44291258-44291316)
chr3 (406-519)||(30258979-30259091)
chr3 (565-602)||(41694925-41694962)
[»] chr6 (59 HSPs)
chr6 (416-601)||(10485181-10485366)
chr6 (418-602)||(3259706-3259890)
chr6 (416-602)||(24203385-24203571)
chr6 (416-599)||(15276857-15277040)
chr6 (420-602)||(10960023-10960205)
chr6 (418-602)||(166845-167029)
chr6 (416-602)||(11613711-11613897)
chr6 (416-602)||(15277200-15277386)
chr6 (416-602)||(17867858-17868044)
chr6 (416-602)||(17877641-17877827)
chr6 (416-602)||(32409772-32409958)
chr6 (418-602)||(3932729-3932913)
chr6 (416-602)||(11382087-11382271)
chr6 (421-602)||(2614919-2615100)
chr6 (411-602)||(34176853-34177044)
chr6 (420-602)||(11279151-11279333)
chr6 (420-602)||(10324035-10324217)
chr6 (446-602)||(24242687-24242843)
chr6 (420-602)||(3379733-3379915)
chr6 (417-602)||(11212280-11212465)
chr6 (416-602)||(14925376-14925562)
chr6 (416-602)||(32860074-32860260)
chr6 (411-602)||(31870012-31870206)
chr6 (411-602)||(11675289-11675480)
chr6 (418-602)||(9902580-9902764)
chr6 (417-602)||(8177803-8177987)
chr6 (415-602)||(17443285-17443467)
chr6 (458-601)||(32132342-32132485)
chr6 (416-602)||(18057542-18057728)
chr6 (417-599)||(18597079-18597261)
chr6 (463-602)||(4494081-4494221)
chr6 (416-602)||(29054379-29054565)
chr6 (422-602)||(9613997-9614177)
chr6 (416-602)||(3290695-3290868)
chr6 (418-602)||(7396048-7396231)
chr6 (420-591)||(23636257-23636428)
chr6 (417-597)||(14807939-14808102)
chr6 (1040-1144)||(17900748-17900852)
chr6 (1030-1144)||(11101906-11102020)
chr6 (416-494)||(14925137-14925215)
chr6 (1040-1144)||(26608910-26609013)
chr6 (496-599)||(34683985-34684086)
chr6 (1035-1137)||(19418608-19418710)
chr6 (1049-1137)||(10252979-10253067)
chr6 (425-599)||(9200316-9200491)
chr6 (1043-1144)||(22297584-22297684)
chr6 (419-488)||(33041403-33041472)
chr6 (455-601)||(35004087-35004233)
chr6 (422-518)||(28967221-28967316)
chr6 (1030-1089)||(1970647-1970706)
chr6 (421-488)||(13415861-13415928)
chr6 (1062-1124)||(18493269-18493331)
chr6 (1035-1128)||(34301869-34301963)
chr6 (422-494)||(29424498-29424570)
chr6 (462-520)||(27824619-27824677)
chr6 (544-602)||(27824698-27824756)
chr6 (667-721)||(31870271-31870325)
chr6 (468-553)||(5650677-5650761)
chr6 (421-515)||(34402903-34402992)
[»] chr4 (103 HSPs)
chr4 (416-601)||(44649038-44649223)
chr4 (416-601)||(52949747-52949932)
chr4 (416-601)||(50178366-50178552)
chr4 (416-602)||(23521906-23522092)
chr4 (416-602)||(50727787-50727973)
chr4 (416-602)||(50735801-50735987)
chr4 (416-601)||(36497244-36497429)
chr4 (416-601)||(38486131-38486316)
chr4 (416-602)||(24002365-24002551)
chr4 (417-602)||(20802406-20802591)
chr4 (417-602)||(38812546-38812731)
chr4 (410-602)||(36885958-36886150)
chr4 (411-602)||(44324211-44324402)
chr4 (416-602)||(2629825-2630011)
chr4 (416-602)||(12600912-12601098)
chr4 (416-602)||(33552716-33552902)
chr4 (416-602)||(36743563-36743748)
chr4 (416-601)||(1231338-1231523)
chr4 (411-599)||(3649665-3649853)
chr4 (411-602)||(29785405-29785597)
chr4 (420-602)||(2725011-2725192)
chr4 (416-602)||(11056068-11056254)
chr4 (418-602)||(9512216-9512400)
chr4 (434-602)||(37865779-37865947)
chr4 (420-602)||(33176910-33177092)
chr4 (416-602)||(46680384-46680570)
chr4 (416-602)||(50729416-50729602)
chr4 (416-602)||(56154647-56154833)
chr4 (416-602)||(20517895-20518082)
chr4 (417-599)||(2786993-2787175)
chr4 (439-601)||(47642388-47642550)
chr4 (416-599)||(22318258-22318441)
chr4 (417-602)||(42870000-42870182)
chr4 (415-601)||(55065206-55065392)
chr4 (416-602)||(21580052-21580237)
chr4 (417-599)||(29592924-29593106)
chr4 (421-599)||(39078690-39078868)
chr4 (417-602)||(4325817-4326002)
chr4 (417-602)||(28115278-28115462)
chr4 (416-600)||(52319351-52319540)
chr4 (441-601)||(21202766-21202926)
chr4 (418-602)||(32181289-32181473)
chr4 (416-602)||(29616196-29616378)
chr4 (417-599)||(53200518-53200701)
chr4 (417-599)||(6776607-6776789)
chr4 (418-599)||(49151976-49152157)
chr4 (418-602)||(55593911-55594096)
chr4 (422-602)||(24210345-24210525)
chr4 (418-602)||(54543016-54543198)
chr4 (415-602)||(47361286-47361469)
chr4 (416-602)||(16320545-16320730)
chr4 (421-602)||(20694397-20694578)
chr4 (416-599)||(26083368-26083549)
chr4 (417-595)||(25978487-25978664)
chr4 (416-602)||(50186554-50186740)
chr4 (418-602)||(41711873-41712057)
chr4 (414-581)||(42772835-42773002)
chr4 (411-602)||(9807182-9807372)
chr4 (411-599)||(7554826-7555014)
chr4 (433-601)||(34929942-34930110)
chr4 (417-575)||(6973788-6973946)
chr4 (471-601)||(37695470-37695600)
chr4 (418-550)||(14296645-14296777)
chr4 (418-550)||(14314893-14315025)
chr4 (1040-1144)||(50086635-50086739)
chr4 (417-548)||(56487162-56487288)
chr4 (1043-1144)||(16072348-16072449)
chr4 (417-509)||(23328015-23328107)
chr4 (1040-1138)||(49649891-49649989)
chr4 (414-599)||(30942817-30943002)
chr4 (422-591)||(9947966-9948135)
chr4 (416-575)||(44355729-44355887)
chr4 (527-602)||(43641125-43641200)
chr4 (1007-1125)||(27655329-27655448)
chr4 (1035-1144)||(40161032-40161141)
chr4 (527-602)||(23327944-23328020)
chr4 (1030-1137)||(6480663-6480770)
chr4 (417-536)||(44640415-44640533)
chr4 (473-602)||(45577619-45577752)
chr4 (418-602)||(52673837-52674024)
chr4 (1062-1138)||(41377213-41377289)
chr4 (416-491)||(13110443-13110518)
chr4 (422-509)||(43739557-43739644)
chr4 (1043-1125)||(42810389-42810471)
chr4 (523-601)||(43739488-43739566)
chr4 (416-469)||(2114195-2114248)
chr4 (504-598)||(7001882-7001976)
chr4 (473-602)||(21098560-21098689)
chr4 (1043-1108)||(21416206-21416271)
chr4 (528-600)||(37931948-37932020)
chr4 (473-553)||(51518448-51518528)
chr4 (1032-1128)||(30116768-30116864)
chr4 (1057-1144)||(14815384-14815471)
chr4 (1040-1125)||(50095280-50095365)
chr4 (474-601)||(10587062-10587189)
chr4 (543-602)||(38520525-38520584)
chr4 (559-602)||(40792443-40792486)
chr4 (1083-1137)||(22280352-22280406)
chr4 (416-457)||(38520597-38520639)
chr4 (667-729)||(44649287-44649349)
chr4 (478-552)||(47666984-47667058)
chr4 (679-729)||(52949620-52949670)
chr4 (1048-1094)||(53934089-53934135)
[»] chr1 (87 HSPs)
chr1 (415-602)||(1351390-1351577)
chr1 (416-601)||(50304684-50304869)
chr1 (411-602)||(35387262-35387453)
chr1 (416-602)||(844680-844866)
chr1 (416-602)||(31004164-31004350)
chr1 (412-601)||(32270386-32270575)
chr1 (416-601)||(42512726-42512911)
chr1 (416-602)||(45490831-45491017)
chr1 (416-602)||(51264527-51264713)
chr1 (417-602)||(6711003-6711188)
chr1 (416-602)||(17887980-17888166)
chr1 (416-602)||(26118171-26118357)
chr1 (416-602)||(32289300-32289486)
chr1 (416-602)||(41972943-41973129)
chr1 (416-602)||(42510557-42510743)
chr1 (417-602)||(16451159-16451344)
chr1 (417-602)||(17327606-17327791)
chr1 (418-602)||(16386886-16387069)
chr1 (417-602)||(41967805-41967991)
chr1 (416-602)||(45658853-45659039)
chr1 (418-602)||(28340262-28340445)
chr1 (411-602)||(30105630-30105822)
chr1 (417-600)||(5109762-5109945)
chr1 (417-602)||(50540376-50540561)
chr1 (416-602)||(24339594-24339781)
chr1 (416-602)||(11772588-11772774)
chr1 (416-602)||(26764751-26764937)
chr1 (417-602)||(39281926-39282111)
chr1 (416-601)||(44737998-44738183)
chr1 (416-599)||(6029252-6029440)
chr1 (411-602)||(7183950-7184141)
chr1 (422-601)||(16437395-16437574)
chr1 (416-599)||(15539846-15540029)
chr1 (416-602)||(16476111-16476297)
chr1 (416-602)||(49303310-49303496)
chr1 (449-602)||(12890270-12890423)
chr1 (417-602)||(1601205-1601387)
chr1 (449-602)||(13994064-13994217)
chr1 (421-599)||(6143947-6144125)
chr1 (417-601)||(7837166-7837351)
chr1 (435-602)||(16704758-16704925)
chr1 (416-602)||(51703119-51703305)
chr1 (417-548)||(8838983-8839114)
chr1 (416-602)||(46154932-46155125)
chr1 (437-599)||(38086973-38087135)
chr1 (416-600)||(42705193-42705378)
chr1 (416-599)||(10384402-10384580)
chr1 (421-602)||(3414814-3414995)
chr1 (414-599)||(50382354-50382542)
chr1 (416-520)||(21071728-21071832)
chr1 (418-513)||(38663228-38663323)
chr1 (417-578)||(7837430-7837592)
chr1 (1003-1144)||(5178741-5178881)
chr1 (1040-1144)||(11802914-11803018)
chr1 (417-601)||(39792840-39793023)
chr1 (1049-1136)||(48502580-48502667)
chr1 (416-602)||(26733587-26733773)
chr1 (416-494)||(40811327-40811405)
chr1 (539-601)||(38663165-38663227)
chr1 (527-602)||(25539887-25539962)
chr1 (1006-1144)||(52112357-52112492)
chr1 (479-549)||(20494927-20494997)
chr1 (1032-1144)||(13643581-13643692)
chr1 (421-493)||(23799531-23799603)
chr1 (414-601)||(17291612-17291798)
chr1 (457-602)||(504388-504533)
chr1 (421-602)||(31574386-31574566)
chr1 (411-516)||(47242467-47242572)
chr1 (474-601)||(570419-570549)
chr1 (526-575)||(23799603-23799652)
chr1 (1070-1127)||(25161449-25161506)
chr1 (416-469)||(25539983-25540036)
chr1 (418-535)||(33316498-33316615)
chr1 (444-553)||(35335781-35335890)
chr1 (1067-1144)||(50295245-50295322)
chr1 (1041-1137)||(2356382-2356477)
chr1 (464-599)||(32215227-32215362)
chr1 (416-494)||(7146900-7146978)
chr1 (416-466)||(16643188-16643238)
chr1 (473-602)||(40610754-40610883)
chr1 (677-731)||(42512987-42513041)
chr1 (472-601)||(6771401-6771530)
chr1 (676-729)||(38663037-38663090)
chr1 (677-729)||(50304556-50304608)
chr1 (1051-1124)||(13969113-13969186)
chr1 (1067-1124)||(15419681-15419738)
chr1 (1063-1124)||(44109097-44109158)
[»] chr8 (67 HSPs)
chr8 (417-601)||(10467088-10467272)
chr8 (411-601)||(7591338-7591528)
chr8 (417-602)||(34063151-34063336)
chr8 (418-602)||(8672953-8673137)
chr8 (416-602)||(4052503-4052689)
chr8 (420-601)||(22999281-22999463)
chr8 (416-602)||(39642906-39643092)
chr8 (416-601)||(41548642-41548827)
chr8 (411-602)||(37664173-37664365)
chr8 (416-602)||(30542918-30543104)
chr8 (416-602)||(41709800-41709986)
chr8 (416-601)||(27103983-27104168)
chr8 (416-602)||(7394710-7394896)
chr8 (416-602)||(30501168-30501354)
chr8 (416-602)||(31513479-31513665)
chr8 (416-602)||(34101531-34101717)
chr8 (416-602)||(37618288-37618474)
chr8 (416-602)||(45446478-45446664)
chr8 (416-563)||(37474762-37474909)
chr8 (416-602)||(3251552-3251738)
chr8 (420-602)||(15001489-15001671)
chr8 (416-602)||(25478266-25478452)
chr8 (421-602)||(12753226-12753407)
chr8 (421-593)||(40389072-40389244)
chr8 (416-602)||(29672218-29672405)
chr8 (417-599)||(29610952-29611134)
chr8 (416-602)||(35225685-35225871)
chr8 (419-602)||(14004943-14005126)
chr8 (411-602)||(32019892-32020083)
chr8 (416-602)||(5968760-5968946)
chr8 (416-602)||(6386599-6386785)
chr8 (419-602)||(13406834-13407017)
chr8 (416-602)||(37861882-37862067)
chr8 (454-602)||(29563160-29563308)
chr8 (416-601)||(17520619-17520803)
chr8 (417-602)||(17805714-17805899)
chr8 (417-602)||(45114078-45114263)
chr8 (416-602)||(16485705-16485891)
chr8 (418-602)||(31732087-31732257)
chr8 (1055-1144)||(38388529-38388618)
chr8 (421-601)||(10656587-10656767)
chr8 (1040-1138)||(1988792-1988890)
chr8 (1048-1144)||(24757059-24757155)
chr8 (421-602)||(10932759-10932940)
chr8 (416-602)||(21272707-21272876)
chr8 (416-602)||(22756312-22756493)
chr8 (416-509)||(32303504-32303597)
chr8 (433-602)||(16595063-16595231)
chr8 (416-490)||(38047481-38047555)
chr8 (527-602)||(32303592-32303667)
chr8 (1049-1123)||(34832302-34832376)
chr8 (1040-1137)||(1551508-1551605)
chr8 (1054-1144)||(22266240-22266328)
chr8 (1040-1144)||(35762296-35762399)
chr8 (418-602)||(6460284-6460465)
chr8 (1035-1121)||(37564779-37564865)
chr8 (473-602)||(54193-54322)
chr8 (1040-1137)||(9791864-9791960)
chr8 (421-601)||(10320180-10320358)
chr8 (511-602)||(27109532-27109623)
chr8 (1057-1107)||(13904055-13904105)
chr8 (416-498)||(15351820-15351902)
chr8 (1044-1092)||(12201850-12201898)
chr8 (1044-1092)||(12446278-12446326)
chr8 (556-602)||(11944898-11944944)
chr8 (556-601)||(14958983-14959027)
chr8 (418-491)||(42110695-42110768)
[»] chr5 (51 HSPs)
chr5 (416-602)||(11963364-11963550)
chr5 (417-602)||(24181512-24181697)
chr5 (421-602)||(7523195-7523376)
chr5 (417-602)||(32528738-32528923)
chr5 (411-602)||(4689580-4689771)
chr5 (416-602)||(8136860-8137046)
chr5 (416-602)||(34794910-34795096)
chr5 (416-602)||(39918530-39918716)
chr5 (417-602)||(3735380-3735565)
chr5 (416-602)||(2351703-2351889)
chr5 (416-602)||(7770166-7770352)
chr5 (416-602)||(31879963-31880149)
chr5 (416-602)||(35701300-35701486)
chr5 (416-601)||(41459613-41459797)
chr5 (416-602)||(31644469-31644655)
chr5 (421-602)||(553420-553601)
chr5 (417-602)||(39788216-39788401)
chr5 (418-602)||(31770480-31770664)
chr5 (418-602)||(24036253-24036436)
chr5 (416-602)||(7208117-7208303)
chr5 (416-602)||(8560869-8561055)
chr5 (416-599)||(18470315-18470498)
chr5 (416-602)||(27838961-27839146)
chr5 (416-601)||(29241402-29241587)
chr5 (417-601)||(23091192-23091376)
chr5 (422-602)||(41790356-41790535)
chr5 (463-602)||(21739095-21739234)
chr5 (432-601)||(22493322-22493491)
chr5 (422-598)||(7725702-7725878)
chr5 (416-602)||(40489360-40489545)
chr5 (474-602)||(4818085-4818213)
chr5 (417-601)||(5598504-5598688)
chr5 (416-602)||(5571544-5571717)
chr5 (417-602)||(6284188-6284371)
chr5 (471-602)||(28090462-28090593)
chr5 (473-602)||(22432253-22432382)
chr5 (421-602)||(32092874-32093054)
chr5 (416-571)||(37148476-37148631)
chr5 (441-602)||(700513-700674)
chr5 (416-533)||(4664923-4665040)
chr5 (432-602)||(17031180-17031350)
chr5 (426-586)||(5673178-5673329)
chr5 (538-602)||(40182487-40182551)
chr5 (1004-1144)||(35556890-35557027)
chr5 (1035-1144)||(19129728-19129838)
chr5 (1004-1102)||(26139710-26139807)
chr5 (1056-1128)||(8435079-8435151)
chr5 (417-460)||(40182553-40182596)
chr5 (416-454)||(21739017-21739055)
chr5 (1035-1121)||(10568975-10569060)
chr5 (474-547)||(35955077-35955150)
[»] chr2 (70 HSPs)
chr2 (416-601)||(9732811-9732996)
chr2 (418-602)||(7258920-7259104)
chr2 (414-601)||(18685860-18686047)
chr2 (411-602)||(33889266-33889457)
chr2 (416-602)||(34338833-34339019)
chr2 (416-602)||(7761454-7761640)
chr2 (417-602)||(37308678-37308864)
chr2 (417-602)||(32497938-32498123)
chr2 (414-602)||(2644966-2645153)
chr2 (418-602)||(3913343-3913527)
chr2 (422-602)||(35114808-35114988)
chr2 (413-602)||(17540738-17540927)
chr2 (418-601)||(44284653-44284836)
chr2 (416-602)||(28824438-28824624)
chr2 (416-602)||(33366633-33366819)
chr2 (416-602)||(42365600-42365786)
chr2 (416-602)||(30798370-30798556)
chr2 (416-602)||(16177764-16177950)
chr2 (418-602)||(19513571-19513756)
chr2 (417-602)||(30326214-30326398)
chr2 (417-602)||(38992953-38993138)
chr2 (416-601)||(40692321-40692506)
chr2 (416-600)||(11114897-11115079)
chr2 (416-599)||(6896194-6896377)
chr2 (416-599)||(10399751-10399934)
chr2 (416-602)||(32766385-32766572)
chr2 (420-602)||(5278720-5278901)
chr2 (435-602)||(42706382-42706549)
chr2 (416-602)||(40832350-40832536)
chr2 (411-596)||(38623180-38623365)
chr2 (432-602)||(26981606-26981776)
chr2 (418-599)||(30712882-30713067)
chr2 (421-602)||(39461337-39461518)
chr2 (440-602)||(16104297-16104459)
chr2 (416-518)||(37863247-37863349)
chr2 (417-602)||(41365992-41366177)
chr2 (430-602)||(12672373-12672541)
chr2 (417-602)||(2086095-2086270)
chr2 (416-599)||(8112326-8112510)
chr2 (416-509)||(9717317-9717410)
chr2 (1043-1144)||(19994924-19995025)
chr2 (422-544)||(18793180-18793300)
chr2 (433-602)||(4641539-4641706)
chr2 (416-599)||(13829464-13829635)
chr2 (418-575)||(27462685-27462842)
chr2 (1032-1139)||(36622114-36622222)
chr2 (416-502)||(37003772-37003858)
chr2 (428-602)||(15303133-15303307)
chr2 (419-602)||(12939202-12939367)
chr2 (1040-1144)||(41385045-41385149)
chr2 (523-602)||(26418946-26419025)
chr2 (1040-1143)||(43248708-43248811)
chr2 (1067-1144)||(16498137-16498214)
chr2 (1048-1141)||(19606282-19606375)
chr2 (1035-1144)||(35501406-35501515)
chr2 (422-602)||(41934604-41934785)
chr2 (527-602)||(9717247-9717322)
chr2 (523-602)||(37003856-37003935)
chr2 (416-519)||(45463003-45463107)
chr2 (538-601)||(1247171-1247234)
chr2 (421-516)||(83379-83474)
chr2 (470-602)||(26796251-26796383)
chr2 (414-490)||(31193947-31194023)
chr2 (418-461)||(26419045-26419089)
chr2 (414-490)||(31212580-31212656)
chr2 (1048-1108)||(40664663-40664723)
chr2 (417-452)||(1247258-1247293)
chr2 (538-601)||(45463113-45463176)
chr2 (472-581)||(35170150-35170259)
chr2 (1028-1117)||(18717883-18717972)
[»] scaffold0014 (1 HSPs)
scaffold0014 (414-602)||(101972-102160)
[»] scaffold0054 (1 HSPs)
scaffold0054 (416-602)||(23598-23784)
[»] scaffold0027 (1 HSPs)
scaffold0027 (416-602)||(15195-15381)
[»] scaffold0208 (1 HSPs)
scaffold0208 (416-602)||(2226-2411)
[»] scaffold0360 (2 HSPs)
scaffold0360 (416-602)||(15260-15454)
scaffold0360 (504-602)||(13554-13652)
[»] scaffold0280 (1 HSPs)
scaffold0280 (416-599)||(13574-13757)
[»] scaffold0650 (1 HSPs)
scaffold0650 (418-599)||(1532-1713)
[»] scaffold0025 (1 HSPs)
scaffold0025 (422-602)||(5332-5513)
[»] scaffold0729 (1 HSPs)
scaffold0729 (417-599)||(4467-4649)
[»] scaffold0098 (1 HSPs)
scaffold0098 (416-601)||(51463-51647)
[»] scaffold0181 (1 HSPs)
scaffold0181 (416-602)||(18979-19163)
[»] scaffold0004 (1 HSPs)
scaffold0004 (421-602)||(372856-373037)
[»] scaffold0957 (1 HSPs)
scaffold0957 (412-602)||(2379-2568)
[»] scaffold0169 (2 HSPs)
scaffold0169 (457-602)||(17982-18127)
scaffold0169 (527-602)||(12534-12609)
[»] scaffold0050 (1 HSPs)
scaffold0050 (421-599)||(42843-43019)
[»] scaffold0047 (1 HSPs)
scaffold0047 (416-578)||(19042-19205)
[»] scaffold0155 (1 HSPs)
scaffold0155 (514-602)||(33530-33617)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1057-1144)||(24240-24327)
[»] scaffold0886 (1 HSPs)
scaffold0886 (1030-1124)||(1098-1192)


Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-164; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-164
Query Start/End: Original strand, 748 - 1248
Target Start/End: Original strand, 1703588 - 1704102
Alignment:
Q  748 taatataggtcaggtaaccattttgttaggctaaaaaagtatatggactgtgccaagatattttaaaattactcttttcaatttttaaattgcnnnnnnn 847  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||           
T  1703588 taatacaggtcaggtaaccagtttgttaggctaaaaaagtatatggactgtgcgaagatattttaaaattactcttttcaatttttaaattgcttttttt 1703687  T
Q  848 nnnaactgtcgttggtccggcaacaattaaccgtcgttcaatttttcaacgacagttaagtgtcgttagacttttaaaatcggttgaagctatttaaaat 947  Q
       ||| |||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703688 t--aaccgtcgctggtccgacaacaattaaccgttgttcaattttttaacgacagttaagtgtcgttagacttttaaaatcggttgaagctatttaaaat 1703785  T
Q  948 gtgattgagtcgttctaaaaaatgtccaatggtgaaggatttgattttaatttttagggtcttgttaactagtgtctcgggagacattggtcaaggaatt 1047  Q
    ||||||||  ||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  1703786 gtgattgaaccgttctaaaaaatgtccaatggtgagggattcaagtttaatttttagggtcttgttaaccagtgtctcggg-ggcattggtcaaggaatt 1703884  T
Q  1048 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg-ctcc 1146  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||     
T  1703885 caaaagtagaaaaattgtctcggaaatataaactgttacttttgactaactaattattacacaactttttaataaaatcttacctcttttagctgcctcg 1703984  T
Q  1147 ggggcaccaattaacattctcctaatttttaaatgaaataattattgatga----------------ttgggatgatgaaattgtacttacctactaatt 1230  Q
     |  ||||  |||||||||||||||||||||||||||||||||||||||||                | |||||||||||||| | ||||||||||||||    
T  1703985 agaacaccggttaacattctcctaatttttaaatgaaataattattgatgagattttactatttatttagggatgatgaaatttttcttacctactaatt 1704084  T
Q  1231 tgttttaaggtgggtgct 1248  Q
    ||||||||||||||||||    
T  1704085 tgttttaaggtgggtgct 1704102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 20 - 309
Target Start/End: Original strand, 1703177 - 1703475
Alignment:
Q  20 atgagttgatgggaaatcgattgtcaagttttttccatcatattgagaggtaaaacttgtattcatagttannnnnnngagtggatttgttgaatctaag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||     
T  1703177 atgagttgatgggaaatcgattgtcaagttttttccatcatattgagaggtaaaacttgtattcatagttatttttttgagtggatttgttgaatttaaa 1703276  T
Q  120 aatgtaggagtgttaaagaagttaaggaagagttttgccacttattatgtcttatatgga----------cgttcattatgattctacttgactaaaatt 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||| |||||||||||||||||    
T  1703277 aatgtaggagtgttaaagaagttatggaagagttttgccacttattatgtcttatatggattgaatttatcgttcattatga-tctacttgactaaaatt 1703375  T
Q  210 tacagcacttgcacacactctctacttaattgaaagtatgaaattaaaaaaggaaaatgctaacatgttagcgagagttatgacatagtcgagatttata 309  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703376 tacagcactcgcacacactctctacttaattgaaagtatgaaattaaaaaaggaaaatgctaacatgttagcgagagttatgacatagtcgagatttata 1703475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 47953403 - 47953217
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47953403 ggtgcgtttgatttgctaaaaaatgaacgacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 47953304  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  47953303 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 47953217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 38301556 - 38301371
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38301556 ggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactccaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 38301457  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  38301456 ggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtctaaaata 38301371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 420 - 601
Target Start/End: Complemental strand, 43368410 - 43368229
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43368410 cgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaa 43368311  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    || ||  |||||||| |||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  43368310 gagacgggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtctaaaata 43368229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 21785082 - 21784898
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  21785082 tgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggc 21784983  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  21784982 aagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 21784898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 43158568 - 43158751
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43158568 ggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 43158667  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  ||| |||||||| | |||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||||||    
T  43158668 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 43158751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 10932439 - 10932625
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  10932439 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 10932538  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  10932539 gcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatac 10932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 26994107 - 26994293
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  26994107 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 26994206  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||  | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26994207 gcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 26994293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 3922586 - 3922771
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3922586 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggagg 3922685  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  3922686 caagggacaagacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttatctaaaatac 3922771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 43189124 - 43189310
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  43189124 ggtgcgtttgatttgctaaaaaatggaggacatgacaaaacaactctagttgtccagtgtttgatttataaaaatgtttcaggtacaggacaaactggag 43189223  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | |||  |||||||||||| | |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  43189224 gtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaatac 43189310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 11321769 - 11321953
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||    
T  11321769 tgcgtttgatttgctaaaaaatgaagaacatgacagaacaactctagttgtccaatgtttgatttgtaaaactgattcaggtacaggacaaactggaggc 11321868  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||   ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11321869 aacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 11321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 40753373 - 40753182
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||||| | |||||||||| ||||||||  |||||| | ||||||||||||||||||||||||||||||||||||||    
T  40753373 ttaagggtgcgtttgatttgctaaaaaataagggacatgacagaacaactctcgttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaac 40753274  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  ||| |||||||| | |||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  40753273 tggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatac 40753182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 26371691 - 26371877
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| | |||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  26371691 ggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgcaaaactatttcaggtacaggacaaactggag 26371790  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  26371791 gcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatac 26371877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 36769451 - 36769637
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| |||||||||||||||||||||||||||  | | |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  36769451 ggtgtgtttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagag 36769550  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  36769551 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 36769637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 420 - 602
Target Start/End: Original strand, 41211086 - 41211268
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  41211086 cgtttgatttgctaaaaaatgaaggacaggacagaacaactcaagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaa 41211185  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41211186 gggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 41211268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 46633905 - 46633724
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  46633905 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggag 46633806  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |     |||| |||||||| | |||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  46633805 g-----aacaagacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 46633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 1363849 - 1363663
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| |||||||||||||||||| ||||| | |||||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  1363849 ggtgcctttgatttgctaaaaaataaaggataggacaaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcatgtacaggacaaactggag 1363750  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||  |||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||| |||||||    
T  1363749 gcaagggacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatac 1363663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 582
Target Start/End: Complemental strand, 11250830 - 11250664
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  11250830 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttcatttgtaaaattgtttcaggtacaggacaaactggag 11250731  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccat 582  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  11250730 gcaagggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactttttgtcccat 11250664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 18386737 - 18386552
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||||||||||||||||||||||| |||| ||||| || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  18386737 ggtgtgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 18386638  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| ||| |||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  18386637 gcaagggacaggac-aaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 18386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 20127500 - 20127316
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||| ||||||| || | |||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  20127500 tgcgtttgatttgctaataaatgaaagataggacagaacaactccagttgtccagtgtttgatttttaaaactatttcaggtacaggacaaactggaggc 20127401  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  20127400 aagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaatac 20127316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 44748906 - 44748722
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  44748906 tgcgtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggc 44748807  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  |||  ||||||| | | |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||    
T  44748806 aagggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtctaaaatac 44748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 9913737 - 9913552
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||||| |||    
T  9913737 ggtgcatttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaactagag 9913638  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  9913637 gcaagggacaggacaaaaattgata-ttttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaatac 9913552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 9927425 - 9927240
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||||| |||    
T  9927425 ggtgcatttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaactagag 9927326  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  9927325 gcaagggacaggacaaaaattgata-ttttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaatac 9927240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 598
Target Start/End: Original strand, 47316580 - 47316762
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| |||||| || ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  47316580 ggtgcgtttgatttgctaaaaaatgaaggatatgacagaataactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggag 47316679  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaa 598  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| ||  | |||||||||||||    
T  47316680 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttgtctaaa 47316762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 1870348 - 1870163
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||||||||||||||||||||||||||   || |||||||| ||||||  |||||||||||||||||||||||||||||||| || |||||||||    
T  1870348 ggtgcatttgatttgctaaaaaatgaaggacagtgcagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggag 1870249  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1870248 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 1870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 18470888 - 18470711
Alignment:
Q  423 ttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaa 522  Q
    ||||||||||| ||||||||||||| || | |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  18470888 ttgatttgctacaaaatgaaggacaggatagaacaactctagttgtcgagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag-- 18470791  T
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||| |||||||| | ||||||||||| |||| ||||||||| || |||||||||||||| ||||||||||||||||||||    
T  18470790 acaggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaatac 18470711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 17237289 - 17237106
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||     
T  17237289 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacagtacaaactggat 17237190  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||| ||||||||||||| | |||||||||||  |||  |||||||| |||||||||||||| || |||||| || |||||||    
T  17237189 gcaaggaacatgacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaaattatctaaaa 17237106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 34295293 - 34295471
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||| |||||||||| || || | |||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  34295293 ggtgcgtttgattagctaaaaaataaaagataggacagaacaactccagttatccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 34295392  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||       |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  34295393 gcaa-------gacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 34295471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 30849128 - 30849314
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| ||||| || ||||||| | || ||||||||||||||||||| |||||||||||||||||| |    
T  30849128 ggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaattctagttgtccaatgattgatttgtaaaactgttttaggtacaggacaaactggtg 30849227  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  30849228 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgtataaaatac 30849314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 416 - 588
Target Start/End: Complemental strand, 48894930 - 48894758
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||     
T  48894930 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttcaggtacagtacaaactggat 48894831  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaa 588  Q
    |||||  ||| |||||||| | |||||||||||  |||  |||||||||||||||||||||||||| ||||||    
T  48894830 gcaagggacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactttttgtcccacgtacaa 48894758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 29661535 - 29661350
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| | || | |||||||| ||||||| ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  29661535 ggtgcgtttgatttgctaaaaaatgaaggata-gatagaacaactctagttgtccagtgtttgatttgtagaactgattcaggtacatgacaaactggag 29661437  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||| ||||||||||    
T  29661436 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagttatctaaaatac 29661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 418 - 599
Target Start/End: Complemental strand, 329687 - 329500
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactcca------gttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 511  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||      ||||||  ||||||||||||||||||||||||||| |||| |||||||    
T  329687 tgcgtttgatttgttaaaaaatgaaggacaagacaaaacaactccaactccagttgtcccgtgtttgatttgtaaaactgtttcagggacagaacaaact 329588  T
Q  512 ggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||||||   ||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  329587 ggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaa 329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 420 - 602
Target Start/End: Original strand, 43213811 - 43213993
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  43213811 cgtttgatttgctaaaaaatgaagaacaggacagaacaacttcagttgtctagtgtttgatttgtaaaactgttttcagtacaggacaaactgaaggcaa 43213910  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| || ||||  |||||||||||||| ||| ||||||||| |||||||||||||||||  ||||||||||| |||||||    
T  43213911 gggacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtcaaaaatac 43213993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 416 - 593
Target Start/End: Complemental strand, 16963351 - 16963174
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| | ||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  16963351 ggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagag 16963252  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgt 593  Q
    |||||  | | |||||||| | |||||||||||||| | |||||||||  |||||||||||||||| |||||||||||    
T  16963251 gcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaatacaactttttgtcccacgtacaagttgt 16963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 414 - 602
Target Start/End: Original strand, 32873652 - 32873837
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||| ||||||||||||||||||||||||||| ||||||||   || ||||||| | |||||||||||||||| |||||||||||| ||| |||||||    
T  32873652 aaggtgtgtttgatttgctaaaaaatgaaggacaggacaaaac---tctagttgtccattgtttgatttgtaaaattgtttcaggtaccggataaactgg 32873748  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  ||| |||||||| | |||||||||||| ||| ||||||||| |||||||||||||| || ||||||||||||| ||||||    
T  32873749 aggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaatac 32873837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 26910293 - 26910478
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| || ||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||    
T  26910293 ggtgcgtttgatttgatataaa-tgaaggacatgacagaacaactacagttgtccagtgtttgatttgtaaaacagtttcagggacagggcaaactggag 26910391  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| ||  |||||||||||||  ||||||||| |||||||||||||| || |||||||||||| |||||||    
T  26910392 gcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttgtcaaaaatac 26910478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 34519721 - 34519535
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||  |||||||| ||||||| |||| ||||||| |||||||| |||||| || ||||||||| |||||||| ||| ||||| ||||||    
T  34519721 ggtgcgtttgatttaataaaaaataaaggacaggacagaacaacttcagttgtccagtgttcgaattgtaaaacagtttcagggacatgacaagctggag 34519622  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| ||  |||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  34519621 gcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtctaaaatac 34519535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 416 - 581
Target Start/End: Complemental strand, 11822436 - 11822271
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||| ||||||||| ||||||| |||| ||||||| || ||||| ||||||||||| |||||||||||| |||||||||||||||||||     
T  11822436 ggtgcgtttgatttactaaaaaataaaggacaggacagaacaacttcacttgtccagtgtttgattcgtaaaactgtttgaggtacaggacaaactggat 11822337  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtccca 581  Q
    |||||  |||||||||||| | |||||||||||| |||  |||||||| |||||||||||||||||    
T  11822336 gcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtccca 11822271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 421 - 599
Target Start/End: Complemental strand, 37967182 - 37967004
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||  ||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  37967182 gtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttctccggtgtttgatttgtaaaactgtttcaggtacatgacaaattggatgcaag 37967083  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
      ||| ||||||||   |||||||||||  |||  | |||||||||||||||||||| ||| ||||||||| |||||||    
T  37967082 ggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagttatctaaaa 37967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 458 - 602
Target Start/End: Original strand, 23349215 - 23349359
Alignment:
Q  458 actccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaa 557  Q
    |||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||||||||||  |||  ||||||| |||||||||||||||||| |||    
T  23349215 actccagttgtccagtgtttgaattgtaaaactatttcaagtacatgacaaactggaggcaagggacagaacaaaaactgatatttttgtccctcaccaa 23349314  T
Q  558 accacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| |||||||||||||||||  |||||||||||||||||||    
T  23349315 accacaacacaactttttgtcccacatacaagttgtctaaaatac 23349359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 411 - 599
Target Start/End: Original strand, 46448521 - 46448709
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| ||||||||||||||| ||||||||  | |||| || | ||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  46448521 ttaagggtgcgtttgatttgttaaaaaatagaagacaagatagaacaacttcagttgtctagtgtttgatttgtaaaattgtttcaggtacggtacaaac 46448620  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||| |||||  |||||| ||||| | |||||||||||| |||  |||||||| ||||||||||||||||||||| || || |||||||    
T  46448621 tggatgcaagggacatgataaaaactcatatttttgtccgtcactaaaccacagcacaactttttgtcccatgtataaattatctaaaa 46448709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 22723914 - 22724100
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||||| |||||||| || ||||||||| |||    
T  22723914 ggtgcgtttgatttgataaaaaatgaaggatgtgacagaacaactccagttgtccagtgtttgatttgtaaaacagtttcagggaccggacaaactcgag 22724013  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | |||  ||| |||||||| ||  || ||||||| ||  ||||||||| | ||||||||| ||||| ||||||||||| ||||||||    
T  22724014 gtaagggacaggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactttttatcccacgtacaagttgtataaaatac 22724100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 48445734 - 48445551
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||| ||||| |||||||||||||| | |||| ||||||||||||| || | ||||| |||||||||||||||| ||| |||| |||||||||||    
T  48445734 ggtgcgtttaatttgttaaaaaatgaaggaaaagacagaacaactccagttatccaatgtttaatttgtaaaactgtttgagggacagaacaaactggag 48445635  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  |||||||||||| ||| |||||||||| ||| |||| ||||  ||||||||||||| |   ||||||||||||||||    
T  48445634 gcaagggacatgacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaa 48445551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 417 - 535
Target Start/End: Complemental strand, 26700689 - 26700571
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||    
T  26700689 gtgcgtttgatttggtaaaaaatgaaggacatgacataacaattccagttgtccagtgtttgatttgtataactgtttcaggtacatgacaaactggagg 26700590  T
Q  517 caagaaacatgacaaaaat 535  Q
    ||||| | | |||||||||    
T  26700589 caagagaaaggacaaaaat 26700571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 434 - 602
Target Start/End: Complemental strand, 21133567 - 21133399
Alignment:
Q  434 aaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaa 533  Q
    |||||||||||| |||| | |||||||| |||| | || ||||| |||||||||||||||||| ||||||||||||||| |||||||  ||| |||||||    
T  21133567 aaaaatgaaggaaatgatagaacaactctagttatttaatgtttaatttgtaaaactgtttcaagtacaggacaaactgaaggcaagggacaagacaaaa 21133468  T
Q  534 attgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||||||| || |||||||  ||||||||||||||||||||||| ||  ||||| |||||||||||||    
T  21133467 actgatattattttccctcaataaaccacatcacaactttttgtctcacatacaaattgtctaaaatac 21133399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 432 - 602
Target Start/End: Original strand, 22724429 - 22724599
Alignment:
Q  432 taaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaa 531  Q
    |||||| | ||||| | |||| ||||| |||||||||  || |||||||||||||||| |||||||| |||||||||||||||||||||  | |||||||    
T  22724429 taaaaagtaaaggataggacagaacaattccagttgttcagcgtttgatttgtaaaacagtttcagggacaggacaaactggaggcaagggatatgacaa 22724528  T
Q  532 aaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||  ||  |||||||||||||| ||||||||| | ||||||| ||||||| ||||||||||||||||||||    
T  22724529 aagctgcaatttttgtccctcaccaaaccacagcgcaactttatgtcccacgtacaagttgtctaaaatac 22724599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 473 - 602
Target Start/End: Original strand, 30598947 - 30599076
Alignment:
Q  473 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactt 572  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||  ||| |||||||  | |||||||||||||||| ||||||||| ||||||||    
T  30598947 tgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactt 30599046  T
Q  573 tttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| || |||||| || ||||||||||    
T  30599047 tttgtctcaagtacaaattatctaaaatac 30599076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1035 - 1144
Target Start/End: Complemental strand, 19778033 - 19777924
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 1134  Q
    |||| ||||||| ||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||||||||  ||| |||||||||||||| |||||    
T  19778033 tggttaaggaatccaaaagtagaaaaattatcttgaaaatataaactgttattttttattaactaattattacatcactctttaataaaatcttacctct 19777934  T
Q  1135 tttagctgct 1144  Q
    ||||||||||    
T  19777933 tttagctgct 19777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 422 - 602
Target Start/End: Original strand, 3891930 - 3892094
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||| | ||||||||||||||                ||||||||||||||||||     
T  3891930 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaa----------------ggacaaactggaggcaagg 3892013  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||| |||||||| | ||||||||||| |||| |||| |||| ||||||||||||||| | |||||||||||||| |||||    
T  3892014 gacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaatac 3892094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 26652965 - 26652894
Alignment:
Q  530 aaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  26652965 aaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 26652894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Original strand, 26203022 - 26203126
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| ||||| |||||||||| |||||||||| ||| | || ||||||||||||||||||||||||  ||||||||||||||| || ||||||||||    
T  26203022 aaggaatccaaaagtagaaaaattgtcttggaaatctaaccagtcacttttgactaactaattattacaccactttttaataaaattttacctcttttag 26203121  T
Q  1140 ctgct 1144  Q
     ||||    
T  26203122 ttgct 26203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 415 - 601
Target Start/End: Original strand, 15035132 - 15035320
Alignment:
Q  415 aggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaa--ctgtttcaggtacaggacaaactg 512  Q
    ||||||||||||||||||||||||||||  ||||||||  ||||||| | || |  | ||||| ||||||||||  ||| | || | |||||||||||||    
T  15035132 aggtgcgtttgatttgctaaaaaatgaaatacatgacatgacaactctaattatacaatgtttaatttgtaaaaaactgctccaaggacaggacaaactg 15035231  T
Q  513 gaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    || ||||   ||| ||| |||||||| ||| |||| ||||| || |||||| ||||||||||||| |||  ||||| ||||||||||||    
T  15035232 gaagcaaaggacaggacgaaaattgaaattcttgttcctcaccagaccacaacacaactttttgtaccacatacaaattgtctaaaata 15035320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 499 - 600
Target Start/End: Complemental strand, 34117581 - 34117481
Alignment:
Q  499 tacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaa 598  Q
    |||||||||||||  ||||||| |  |||| ||||| | |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  34117581 tacaggacaaacttaaggcaaggat-atgataaaaactcatatttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaa 34117483  T
Q  599 at 600  Q
    ||    
T  34117482 at 34117481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 1052 - 1125
Target Start/End: Original strand, 11740376 - 11740449
Alignment:
Q  1052 aatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 1125  Q
    |||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||  |||||||||||||||    
T  11740376 aatagaaaaattgtcttgaaaatataaactgttacttttgatcaactaattattacaccactttttaataaaat 11740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1040 - 1108
Target Start/End: Original strand, 11736139 - 11736207
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 1108  Q
    |||||||| |||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  11736139 aaggaatttaaaagtagaaaaattatcttagaaatataaaccgttacttttgaccaactaattattaca 11736207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 522 - 602
Target Start/End: Original strand, 41665563 - 41665643
Alignment:
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| |||||||| ||  |||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||    
T  41665563 aacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatac 41665643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 1703500 - 1703550
Alignment:
Q  324 attgaaagttattacggtcggttgaacaatctagtggcctaatgactaatt 374  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1703500 attgaaagttattacagtcggttgaacaatctagtggcctaatgactaatt 1703550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1054 - 1128
Target Start/End: Original strand, 7833761 - 7833835
Alignment:
Q  1054 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    |||||||||| ||||| ||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||    
T  7833761 tagaaaaattgtcttgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatctt 7833835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 416 - 538
Target Start/End: Complemental strand, 41223400 - 41223278
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||| ||||||||||||||||| |||| ||||||| |||  ||||   |||||||||||||||||||||||||  | ||  | ||||| |||    
T  41223400 ggtgcgtttgatatgctaaaaaatgaaggatatgataaaacaattccgattgttccgtgtttgatttgtaaaactgtttcaaatgcataataaactagag 41223301  T
Q  516 gcaagaaacatgacaaaaattga 538  Q
     | ||||| ||||||||||||||    
T  41223300 actagaaatatgacaaaaattga 41223278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1055 - 1144
Target Start/End: Complemental strand, 48984469 - 48984381
Alignment:
Q  1055 agaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||||||| ||| ||| || ||| ||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  48984469 agaaaaattattttgaaaacattaacggttactttt-actaactaattattacaccactttttaataaaatcttacctcttttaactgct 48984381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 500 - 601
Target Start/End: Complemental strand, 46409021 - 46408917
Alignment:
Q  500 acaggacaaactggaggcaagaaa----catgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtct 595  Q
    |||||||||||||||| |||||||    || ||||||| |  |||||||||||||||| ||||||||| ||||||||||||||| |  ||||||||||||    
T  46409021 acaggacaaactggagacaagaaagggacaggacaaaactc-atatttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtct 46408923  T
Q  596 aaaata 601  Q
    ||||||    
T  46408922 aaaata 46408917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 411 - 509
Target Start/End: Original strand, 41665475 - 41665573
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    |||| |||| |||||||||| |||| ||| ||||| | |||| |||||||||||||||| ||||||| | || ||||||||||||| | ||||||||||    
T  41665475 ttaagggtgtgtttgatttgataaataataaaggataggacagaacaactccagttgtccagtgtttcaattataaaactgtttcaagaacaggacaaa 41665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 433 - 602
Target Start/End: Original strand, 21408526 - 21408694
Alignment:
Q  433 aaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaa 532  Q
    ||||||||||||||||||||  ||| ||| ||||||  | | ||||||||||||| ||||||  || |||  ||||||||||||||||  ||||||||||    
T  21408526 aaaaaatgaaggacatgacatgacatctctagttgtacaatatttgatttgtaaagctgtttttgggacaacacaaactggaggcaagggacatgacaaa 21408625  T
Q  533 aattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |   | |  |||||||||||  |||||||| || |||||||| |  |||||||||||| ||||||||||    
T  21408626 ga-caaaacatttgtccctcattaaaccacaacataactttttatttcatgtacaagttatctaaaatac 21408694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 2049125 - 2048989
Alignment:
Q  455 acaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcag 554  Q
    |||||| || |||| || ||||||||||| |||| |||||  || || ||||||||| |||||||| ||||| ||||||||  | |||||||||| |||     
T  2049125 acaacttcaattgtataatgtttgatttgaaaaattgtttttgggacgggacaaactagaggcaaggaacataacaaaaatataaatttttgtccatcac 2049026  T
Q  555 caaaccacatcacaactttttgtcccatgtacaagtt 591  Q
     |||||||| || ||| |||||||||| ||| |||||    
T  2049025 taaaccacaacaaaacattttgtcccacgtagaagtt 2048989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 48699500 - 48699425
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| ||| ||| ||||||||||  |||||||| ||||||| ||||| ||| ||||||||||||||||||||    
T  48699500 gacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaatac 48699425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1083 - 1144
Target Start/End: Original strand, 11736212 - 11736273
Alignment:
Q  1083 ttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||| | |||||| ||||||    
T  11736212 ttacttttgaccaactaattattacaccactttttaataaaatcttacttcttttggctgct 11736273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 527 - 600
Target Start/End: Original strand, 29372772 - 29372845
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaat 600  Q
    |||||||| | | |||||||||| |||  |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  29372772 gacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaat 29372845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 16027809 - 16027889
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttca 496  Q
    ||||| ||||||  |||||| || |||||| ||||||| | ||||| |||||| ||||||||||||||||||| |||||||    
T  16027809 ggtgcatttgatcagctaaagaacgaaggatatgacaagataactctagttgtatagtgtttgatttgtaaaattgtttca 16027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 677 - 729
Target Start/End: Complemental strand, 26652818 - 26652766
Alignment:
Q  677 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    ||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  26652818 tgttctcccttgtattgtgctgttttttcttatactgttatgtactgtacttg 26652766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 22631840 - 22631765
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| || |||||||||||||| ||| ||||||||| || ||||||||||   | ||||||||||||||||||||    
T  22631840 gacaataactgatatttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaatac 22631765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 868 - 976
Target Start/End: Complemental strand, 22716621 - 22716511
Alignment:
Q  868 caacaattaaccgtcgttcaatttttcaacgacagttaagtgtcgttagac--ttttaaaatcggttgaagctatttaaaatgtgattgagtcgttctaa 965  Q
    ||||||||||  ||| ||| |||||  ||||||||||||||||| || |||  |||||| ||||||| || ||||||||||||||||| | | | || ||    
T  22716621 caacaattaattgtcattcgattttgtaacgacagttaagtgtcatttgacaattttaagatcggttaaacctatttaaaatgtgattaaatagctcaaa 22716522  T
Q  966 aaaatgtccaa 976  Q
    |||||||||||    
T  22716521 aaaatgtccaa 22716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 411 - 497
Target Start/End: Complemental strand, 28459617 - 28459531
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcag 497  Q
    |||| |||| ||||||||||||||||| ||||  ||||||||  ||||||| |||  | |  |||||||||||||||||||||||||    
T  28459617 ttaagggtgtgtttgatttgctaaaaattgaataacatgacacgacaactcaagtgttatgatgtttgatttgtaaaactgtttcag 28459531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 676 - 733
Target Start/End: Complemental strand, 38301301 - 38301244
Alignment:
Q  676 ttgttctcccttatattttgctgttctttcttatactattatgtactgtacttgttgt 733  Q
    |||||||||||| |||| || ||||||||||| |||| || |||||||||||||||||    
T  38301301 ttgttctcccttgtattgtgttgttctttcttgtactgttctgtactgtacttgttgt 38301244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 565 - 602
Target Start/End: Complemental strand, 47947824 - 47947787
Alignment:
Q  565 cacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaatac 47947787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1040 - 1108
Target Start/End: Original strand, 38448363 - 38448430
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 1108  Q
    |||||||||||||||| ||||||||| ||| |||||||||   ||  ||||||||||||||||||||||    
T  38448363 aaggaattcaaaaata-aaaaattattttgaaaatataaatcattgtttttgactaactaattattaca 38448430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 677 - 729
Target Start/End: Complemental strand, 43368153 - 43368101
Alignment:
Q  677 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    ||||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  43368153 tgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 43368101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 523 - 602
Target Start/End: Complemental strand, 8360658 - 8360580
Alignment:
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||| | | ||| ||||| | ||  |||||||||||||||||||||| ||  ||||||||||||||||||||    
T  8360658 acatgacaaaaaataaaattcttgtctcacactaaaccacatcacaactttttgt-cctcgtacaagttgtctaaaatac 8360580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1062 - 1124
Target Start/End: Original strand, 16563495 - 16563557
Alignment:
Q  1062 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||||||||||||||| ||| |||| | ||| |||| ||||||  ||||||||||||||    
T  16563495 ttatcttggaaatataaactattatttttcagtaaataataattacattactttttaataaaa 16563557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1062 - 1124
Target Start/End: Complemental strand, 16602167 - 16602105
Alignment:
Q  1062 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||||||||||||||| ||| |||| | ||| |||| ||||||  ||||||||||||||    
T  16602167 ttatcttggaaatataaactattatttttcagtaaataataattacattactttttaataaaa 16602105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1062 - 1124
Target Start/End: Complemental strand, 37928388 - 37928326
Alignment:
Q  1062 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||| ||||||||| ||||| ||||||  || ||||||||||| |||||||| ||||||    
T  37928388 ttatcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaa 37928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 7958796 - 7958747
Alignment:
Q  412 taaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactc 461  Q
    ||||||||||||| || || |||||||| |||||||| ||||||||||||    
T  7958796 taaaggtgcgtttcatatgttaaaaaataaaggacataacaaaacaactc 7958747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 419 - 468
Target Start/End: Original strand, 29773522 - 29773571
Alignment:
Q  419 gcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgt 468  Q
    ||||||||| ||||||||||| || |||||||||| |||||| |||||||    
T  29773522 gcgtttgatctgctaaaaaataaatgacatgacaagacaacttcagttgt 29773571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 5e-81; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 5e-81
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 31882897 - 31883082
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31882897 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 31882996  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  31882997 gcaagagacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 31883082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 5e-81
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 50386331 - 50386516
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50386331 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 50386430  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  50386431 gcaagagacatgacaaaaattgatatttttgtgcctcaacaaaccacagcacaactttttgtcctacgtacaagttgtctaaaata 50386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 411 - 601
Target Start/End: Original strand, 33364648 - 33364838
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  33364648 ttaagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaac 33364747  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  33364748 tggaggcaagagacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaata 33364838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 414 - 602
Target Start/End: Original strand, 51259653 - 51259841
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51259653 aaggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 51259752  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  ||| |||||||| | |||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  51259753 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaatac 51259841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 2e-71
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 24571486 - 24571305
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24571486 gtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 24571387  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24571386 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatac 24571305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 12349046 - 12349232
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12349046 ggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 12349145  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | ||||||||||| |||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  12349146 gcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttgtctaaaatac 12349232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 20255254 - 20255069
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20255254 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 20255155  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| |||| |||||||| | |||||||||||||||| ||||||||| |||||||| ||||||||  |||||||||||||||||||    
T  20255154 gcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtccca-ctacaagttgtctaaaatac 20255069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 29585084 - 29584899
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29585084 gtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 29584985  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  29584984 caagtgacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 29584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 39052715 - 39052899
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39052715 tgcgtttgatttgctaaaaaatgaaagacaagacaaaacaactctagttgtctagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggc 39052814  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||   ||| |||||||| | ||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  39052815 aatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 39052899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 40094718 - 40094527
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  40094718 ttaagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaac 40094619  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  ||| |||||||| | |||||||||||||||| |||||||||||||||||||||||  || |||||| |||||||||||||    
T  40094618 tggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaatac 40094527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 432 - 602
Target Start/End: Original strand, 25860312 - 25860482
Alignment:
Q  432 taaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaa 531  Q
    ||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  25860312 taaaaaatgaaggacttgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaa 25860411  T
Q  532 aaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||| | |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  25860412 aaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatac 25860482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 44117148 - 44116963
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||  |||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44117148 gtgcgtttgatttgctaaaaaatgaaggactggacagaacaactctagttgtccagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggagg 44117049  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  44117048 caagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatac 44116963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 2135280 - 2135094
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  2135280 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagag 2135181  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||  ||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||    
T  2135180 gcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaatac 2135094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 21374140 - 21373954
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||| ||||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21374140 ggtgtgtttggtttgctaaaaaatgaagaaaatgacataacaacttcagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgag 21374041  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||  | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  21374040 gcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 21373954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 28676000 - 28675814
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||| ||| |||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28676000 ggtgcgtttgatttgttaaaaaatgaagaacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 28675901  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  | | |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28675900 gcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 28675814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 49748786 - 49748972
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||| ||||||||||| | || | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49748786 ggtgcgtttgatttgctagaaaatgaaggataggatagaacaactcaagttgtttagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 49748885  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| | ||||||    
T  49748886 gcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgttttaaatac 49748972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 50679008 - 50678822
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||| ||| |||| ||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  50679008 ggtgcgtttgatttgctaaaaaatgaagtacaagacataacaattcaagttgtccagtgtttgatttgaaaaactgtttcaggtacaggacaaactggag 50678909  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  |||| |||||||| ||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  50678908 gcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 50678822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 421 - 602
Target Start/End: Original strand, 1344587 - 1344768
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1344587 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaag 1344686  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||| ||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  1344687 ggacaggacagaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 1344768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 416 - 563
Target Start/End: Original strand, 41682928 - 41683075
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41682928 ggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 41683027  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccaca 563  Q
    |||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  41683028 gcaagagacaagacaaaaactgatacttttgtccctcagcaaaccaca 41683075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 25927202 - 25927388
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  25927202 ggtgcgtttgatttgctaaaaaatgatggacaggacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaaatacaggacaaactggag 25927301  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||| | |||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  25927302 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaatac 25927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 42636278 - 42636464
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| |||||||||||||||||||||||||| |||| ||||| || ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  42636278 ggtgcatttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgttttaggtataggacaaactggag 42636377  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||  ||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  42636378 gcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 42636464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 416 - 593
Target Start/End: Original strand, 51925083 - 51925260
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||| ||||||||||| | |||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  51925083 ggtgcgtttgatttgctagaaaatgaaggataggacagaacaactccagttgtccagtgtttaatttgtaaaactgtttcaggtacatgacaaactggag 51925182  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgt 593  Q
    ||||   ||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  51925183 gcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgt 51925260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 3964496 - 3964312
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||| |||||||||||||| | |||| ||||||| |||||||| |||||||||||||||||||||||||| | ||| |||||| |||||||    
T  3964496 tgcgtttgatttgataaaaaatgaaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggc 3964397  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||| |||  |||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3964396 aaggaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatac 3964312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 426 - 602
Target Start/End: Complemental strand, 34026867 - 34026691
Alignment:
Q  426 atttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaaca 525  Q
    |||||||||||||||||||||| |||| |||||||| | ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||  |||    
T  34026867 atttgctaaaaaatgaaggacaggacagaacaactctatttgttcagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggaca 34026768  T
Q  526 tgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||| | |||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  34026767 tgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaatac 34026691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 21221236 - 21221421
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||| ||||||| | | |||||||||||||||||||||||||||||||| ||||||||    
T  21221236 ggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggac-aactggag 21221334  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  21221335 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 21221421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 3867524 - 3867707
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||| |||| ||| |||||||    
T  3867524 ggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcagggacagaacatactggag 3867623  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
     ||||| |||||||||||  ||| |||||||||||||| ||||||||| ||||||||||||||| | ||||||||| |||||||    
T  3867624 acaagagacatgacaaaacctgaaatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaa 3867707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 29646276 - 29646090
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| |||||||| ||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||||||| ||||||| || |||||||||    
T  29646276 ggtgcatttgattttctaaaaaatgaaggacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgttttaggtacacgataaactggag 29646177  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  | | ||||||||   |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  29646176 gcaagggataggacaaaaacatatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtttaaaatac 29646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 38213564 - 38213378
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||| ||||||||||||||||| |||| || | |||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||    
T  38213564 ggtgcgttttatttgctaaaaaatgaaagacaggatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtataggacaatctggag 38213465  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||| |||||||| | ||||||||||| ||||  |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38213464 gcaagagacaggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 38213378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 418 - 599
Target Start/End: Complemental strand, 19906970 - 19906789
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||| |||||||| |||||||||||||||| || ||||||||| |||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  19906970 tgcgattgatttgttaaaaaatgaaggacaggataaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggc 19906871  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||  ||| |||||||| ||| |||||||||||||| ||||||||| |||||||||||||| || |||||||||||||||||    
T  19906870 aagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaa 19906789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 437 - 602
Target Start/End: Original strand, 20609544 - 20609709
Alignment:
Q  437 aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaatt 536  Q
    ||||||||||| |||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||  ||| |||||||| |    
T  20609544 aatgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggacaggacaaaaact 20609643  T
Q  537 gatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  20609644 catatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 20609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 47958308 - 47958493
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||| || |||||  | | |||||||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  47958308 gtgcgtttgatttgctaaaaaacgatggacagtatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggaaaaactggagg 47958407  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  47958408 caagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaatac 47958493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 3864552 - 3864736
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||| ||||||||||||||||  |||| |||| |||||||  |||||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  3864552 ggtgcgtttcatttgctaaaaaatga--gacaggacagaacaactttagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggag 3864649  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| | |||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  3864650 gcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 3864736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 53557665 - 53557856
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| ||||| |||||||||||||||||| ||||| |||||| | |||||| ||||||  | |||||||||||||||||||||| |||||||||||||||    
T  53557665 ttaagggtgcatttgatttgctaaaaaataaaggatatgacagagcaactctagttgttcaatgtttgatttgtaaaactgttttaggtacaggacaaac 53557764  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||   ||| |||||||| | ||| |||||||||||| ||||||||  |||||||||||||| || ||||||||||||||||||||    
T  53557765 tggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtctaaaatac 53557856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 422 - 602
Target Start/End: Original strand, 54622678 - 54622857
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  || |||||||||||||||||||||||||||  ||||||||  | |||||     
T  54622678 tttgatttgctaaaaaatgaaggacatgacaaaacaacttcagttgtccggtatttgatttgtaaaactgtttcaggtac-tgacaaactaaatgcaagg 54622776  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||| |||||||| | ||||||||||| ||||  |||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  54622777 gacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtctaaaatac 54622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 51296789 - 51296605
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||   || ||||  ||| |||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  51296789 ggtgcgtttgatttgctaaaaat--aaagacagaacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggag 51296692  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| | |||||||||||||||| ||||||||| ||||| ||||||||| | ||||||||||||||||||||    
T  51296691 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtctaaaatac 51296605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 3695182 - 3695353
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  3695182 ggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactggag 3695281  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| ||||||||               |||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  3695282 gcaagggacaggacaaaaa---------------ctcaccaaaccacatcacaaccttttgtcccacgtacaagttgtctaaaatac 3695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 415 - 599
Target Start/End: Complemental strand, 24721696 - 24721512
Alignment:
Q  415 aggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||||| |||| ||||||||||    
T  24721696 aggtgcgtttaatttgttaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcagggacagaacaaactgga 24721597  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    || ||   ||| |||||||| | | ||||| || ||||| ||||||||| ||||||||||| |||||  ||||||||||||||||    
T  24721596 ggtaaaggacaggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacatacaagttgtctaaaa 24721512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 22484618 - 22484804
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||| ||||| |||| |||||||||||||| |||||||| ||| ||||||||||||    
T  22484618 ggtgcgtttgatttgataaaaaatgaaggacaggacagaacaactccaattgtccagtgattgatttgtaaaacagtttcagggacatgacaaactggag 22484717  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||  |   |||||||| |||   ||||| ||| ||||||||||||||||| ||| ||||||||||||||||    
T  22484718 gcaagggacatgacaaaagctacaatttttgttccttgccaaactacaacacaactttttgtcccacgtataagttgtctaaaatac 22484804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 414 - 602
Target Start/End: Original strand, 4851336 - 4851517
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    ||||||||||||||||| ||||||||||||||||      |||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||  |||    
T  4851336 aaggtgcgtttgatttgttaaaaaatgaaggacag-----aacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaagacaatttgg 4851430  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  ||| |||||||| | ||  |||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  4851431 aggcaagggacaggacaaaaactcat--ttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaatac 4851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 5442489 - 5442316
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  5442489 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaagacaaactggag 5442390  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| ||            ||||||||||||| |||| |||| ||||||||||||||||| ||||||| |||||||||||    
T  5442389 gcaagggaca-ga-----------gtttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaata 5442316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 420 - 563
Target Start/End: Complemental strand, 10747406 - 10747263
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||||| |||||||||||||||| |||||||||| | |||||||  |||||||||||||||||||| ||| |||||||||||||||||||| |||    
T  10747406 cgtttgatttgttaaaaaatgaaggacaggacaaaacaatttcagttgttcagtgtttgatttgtaaaactattttaggtacaggacaaactggagacaa 10747307  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccaca 563  Q
    || | | |||||||| |||||||||||| | |||||||||||||    
T  10747306 gagataggacaaaaactgatatttttgttcgtcagcaaaccaca 10747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 45690781 - 45690962
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||| ||| ||||||||| || | ||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  45690781 ggtgcgtttgatttgctataaagtgaaggacaggatagaacaacttcagttgtccagtgtttgatttgcaaaactgtttcaggtacaggataaattggag 45690880  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| |||||||||| ||||||     |||||| |||||||||||||| || | | ||||||||||||||||    
T  45690881 gcaaaggacaggacaaaaactgatatttttctccctc-----accacagcacaactttttgtctcacgcataagttgtctaaaatac 45690962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 416 - 578
Target Start/End: Complemental strand, 6179636 - 6179473
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||  |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||||    
T  6179636 ggtgcgtttgattttataaaaaatgaaggacaggataaaacaactccagttgtccagtgtttgatttgtaaaacagtttcagaaacaggtcaaactggag 6179537  T
Q  516 gcaagaaacatgacaaaaattgatatttttgt-ccctcagcaaaccacatcacaactttttgtc 578  Q
    | |||  ||| |||||||| ||  |||||||| |||||  ||||||||| ||||||||||||||    
T  6179536 gtaagggacaggacaaaaactgtaatttttgtcccctcgccaaaccacagcacaactttttgtc 6179473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1004 - 1144
Target Start/End: Complemental strand, 29458179 - 29458040
Alignment:
Q  1004 gggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatta 1103  Q
    |||||||||||||||||| | ||| || || |||| |||||||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  29458179 gggtcttgttaactagtgccccgg-aggcactggttaaggaatctaaaagtagaaaaattgtcttggaaatataaactgttatttttgactaactaatta 29458081  T
Q  1104 ttacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    |||||  ||||||||||||||| ||  ||||||||||||||    
T  29458080 ttacaccactttttaataaaatattatctcttttagctgct 29458040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 1040 - 1139
Target Start/End: Complemental strand, 20585915 - 20585816
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||    
T  20585915 aaggaattcaaaagtagaaaaattgttttggaaatataaactgttacttttgattaactaattattacaccactttttaataaaatcttacctcttttag 20585816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 43175685 - 43175589
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactg 512  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||| ||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  43175685 ggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgtccagtgtttgatttgtaaaactatttcaggtataggacaaactg 43175589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 472 - 602
Target Start/End: Original strand, 26282315 - 26282448
Alignment:
Q  472 gtgtttgatttgtaaaactgtt---tcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcaca 568  Q
    ||||||||||||||||||| ||   | ||||||| ||||||||||||| |||| ||  |||||||| | ||||||||||| |||| ||||||||| ||||    
T  26282315 gtgtttgatttgtaaaactattatttaaggtacaagacaaactggaggtaagagacgggacaaaaacttatatttttgtctctcatcaaaccacagcaca 26282414  T
Q  569 actttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||||| ||| ||||||||||||||||    
T  26282415 actttttgtcccacgtataagttgtctaaaatac 26282448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 26847532 - 26847350
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||| | ||||||  ||||||||| |||| |||||||| |||||||||||||||| ||  | |  ||||| ||||||||||    
T  26847532 gtttgatttgctaaaaaatgaagcatatgacatgacaactccacttgtatagtgtttaatttgtaaaactgtttaagtgatataacaaattggaggcaag 26847433  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac-tttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||| |||||||| ||| |||  ||||||| |  ||| |||| || ||| |||||||||||  |||||||||||||||||||    
T  26847432 agacaggacaaaaactgaaattcatgtcccttataaaatcacaacaaaacttttttgtcccacatacaagttgtctaaaatac 26847350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Original strand, 26835700 - 26835804
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||||||||| |||||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |  ||||||||||||||| ||  |||||||||    
T  26835700 aaggaattcaaaagtagaaaaattgtcttgaaaatataaattgttacttttgattaactaattattatatcactttttaataaaattttaactcttttag 26835799  T
Q  1140 ctgct 1144  Q
    |||||    
T  26835800 ctgct 26835804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 432 - 599
Target Start/End: Complemental strand, 52300633 - 52300464
Alignment:
Q  432 taaaaaatgaaggacatgacaaaacaactcc---agttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatga 528  Q
    ||||||||||||||||||||| ||||||| |    |||||| | |||||||||  ||||||||||||||  || |||||||||| ||| |||  ||| ||    
T  52300633 taaaaaatgaaggacatgacagaacaacttcggttgttgtccaatgtttgattcataaaactgtttcagagacgggacaaactgcaggtaagggacagga 52300534  T
Q  529 caaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||| ||| |||||||||| ||| ||||||||| | ||| ||||||||||| |||||||||||||||||    
T  52300533 caaaaactgaaatttttgtccatcaccaaaccacaacgcaattttttgtccca-gtacaagttgtctaaaa 52300464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1044 - 1138
Target Start/End: Complemental strand, 45054493 - 45054399
Alignment:
Q  1044 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 1138  Q
    ||||||||| |||||||||| | || |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| | |||||||    
T  45054493 aattcaaaagtagaaaaattgtgttagaaatataaactgttacttttgactaactaattattacactattttttaataaaatcttacttctttta 45054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 476 - 601
Target Start/End: Original strand, 34351303 - 34351428
Alignment:
Q  476 ttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttttt 575  Q
    ||||||||||||||||||||||| ||| |||||||| |||| || | ||| ||||||||   | ||| |||||||||| ||||||||| |||||||||||    
T  34351303 ttgatttgtaaaactgtttcagggacatgacaaactagaggaaatagacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaacttttt 34351402  T
Q  576 gtcccatgtacaagttgtctaaaata 601  Q
    ||| ||  ||||||||||||||||||    
T  34351403 gtcgcacatacaagttgtctaaaata 34351428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 8253883 - 8253698
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||| | ||||||||||||||| | ||||| ||||||| |||||| || |||| ||||||||||  ||||||| | ||| ||||||||||||    
T  8253883 ggtgcgtttgatctactaaaaaatgaaggataagacaagacaactctagttgtataatgttcgatttgtaaagttgtttcaaggacaagacaaactggag 8253784  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |||| ||||||| ||||| |||  || ||||| || |  |||||||  ||||||| |||| ||||  || ||||||||||||||||    
T  8253783 tcaaggaacatgataaaaactgaagttcttgtctct-actaaaccacgacacaactctttgccccaattaaaagttgtctaaaatac 8253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 476 - 602
Target Start/End: Original strand, 39215404 - 39215530
Alignment:
Q  476 ttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttttt 575  Q
    ||||||||||||||||||||| | ||||||||||| ||||| |||  ||| |||||||| ||| ||||||  |||| | | ||||| |||| || |||||    
T  39215404 ttgatttgtaaaactgtttcaagaacaggacaaaccggaggtaagggacaagacaaaaactgaaatttttaccccttaccgaaccaaatcataatttttt 39215503  T
Q  576 gtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||||||||||||||||||||    
T  39215504 gtcccacgtacaagttgtctaaaatac 39215530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 424 - 602
Target Start/End: Complemental strand, 44000462 - 44000285
Alignment:
Q  424 tgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaa 523  Q
    |||||||||||||| |||| |||||||||  ||||||| ||||||   |||||| ||||||||||||||||  || | | || |||||  ||||||   |    
T  44000462 tgatttgctaaaaa-tgaatgacatgacatgacaactctagttgtaccgtgtttcatttgtaaaactgtttttgggaaatgataaactcaaggcaaagga 44000364  T
Q  524 catgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||  ||  ||||| |||||||  |||||||||||||| ||||||||||| ||||||||| ||| ||||||    
T  44000363 catgacaaaaacagaattttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatac 44000285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 433 - 602
Target Start/End: Complemental strand, 32768786 - 32768616
Alignment:
Q  433 aaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggta--caggacaaactggaggcaagaaacatgaca 530  Q
    ||||||||||  |||||||||  ||||| || ||||  |||||||||||||||||| ||||||||| |  || |||||||   | |||||| ||||||||    
T  32768786 aaaaaatgaataacatgacaac-caacttcaattgtacagtgtttgatttgtaaaattgtttcagggagacatgacaaacaaaaagcaagagacatgaca 32768688  T
Q  531 aaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| ||| ||||||||||  ||||||||||||||||||  || |||  ||| | |||||||||||||    
T  32768687 aaaattgaaattattgtccctcactaaaccacatcacaactttccgttccaattactatttgtctaaaatac 32768616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1005 - 1144
Target Start/End: Original strand, 49452577 - 49452713
Alignment:
Q  1005 ggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattat 1104  Q
    |||||||||||| |||||| ||||   ||||||| || ||||  |||  |||||||||| | ||| ||||||||||||||| ||||||||||||||||||    
T  49452577 ggtcttgttaaccagtgtcccgggg--cattggttaaagaatctaaatgtagaaaaattgttttgaaaatataaactgtta-ttttgactaactaattat 49452673  T
Q  1105 tacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||  | ||||||||||| |||| ||||||||| |||||    
T  49452674 tacatcattttttaataaattcttacctcttttaactgct 49452713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1040 - 1141
Target Start/End: Complemental strand, 14622204 - 14622103
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| |||||||||||||||| | ||| ||||||||| ||||||||||||| |||||||| | |||  |||||| |||||||| || | ||||||||    
T  14622204 aaggaatccaaaaatagaaaaattgtattgaaaatataaattgttacttttgaccaactaattttcacaccacttttcaataaaatattacttcttttag 14622105  T
Q  1140 ct 1141  Q
    ||    
T  14622104 ct 14622103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1040 - 1128
Target Start/End: Original strand, 30863629 - 30863717
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    ||||||||||||| |||||||||| ||||  ||||||||| ||||| |||| |||||| ||||||||||  |||||| |||||||||||    
T  30863629 aaggaattcaaaagtagaaaaattgtcttcaaaatataaattgttatttttaactaacaaattattacaccacttttcaataaaatctt 30863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1084 - 1144
Target Start/End: Complemental strand, 32961247 - 32961187
Alignment:
Q  1084 tacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  32961247 tactttttactaactaattattacaccactttttaataaaatcttacctcttttagctgct 32961187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 44267941 - 44267766
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||| ||||| |||||||||||||||||||   ||||||| |||||||    ||||||||||||||||| |||| ||| | | ||||||||| ||| |||    
T  44267941 gttttatttgataaaaaatgaaggacatgatcgaacaacttcagttgttcgatgtttgatttgtaaaacagttttagg-atatgacaaactgtaggtaag 44267843  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||||||||||||     ||  |||||||||  ||||||||| || |||||||| |||||  ||||| |||||||||||||    
T  44267842 ggacatgacaaaaa-----ataattgtccctcgccaaaccacaacataactttttatcccacatacaaattgtctaaaatac 44267766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1040 - 1128
Target Start/End: Complemental strand, 35483705 - 35483617
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    ||||||||||||| |||||||| | ||||  ||||||||||| ||||||||||  |||||||||||||   ||| ||||||||||||||    
T  35483705 aaggaattcaaaagtagaaaaactgtcttacaaatataaacttttacttttgatcaactaattattactccactctttaataaaatctt 35483617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1087
Target Start/End: Complemental strand, 32961551 - 32961504
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttact 1087  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  32961551 aaggaatccaaaagtagaaaaattatcttggaaatataaactgttact 32961504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 53046605 - 53046664
Alignment:
Q  475 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaa 534  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||  ||| ||||||||    
T  53046605 tttgatttgtaaaactgtttcaggtataggacaaactggaggtaagggacaggacaaaaa 53046664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 523 - 602
Target Start/End: Original strand, 8648539 - 8648618
Alignment:
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||| ||| ||| |||| ||| |  |||| |||||||||||||||||| || |||||| |||||||||||||    
T  8648539 acatgacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaatac 8648618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 475 - 602
Target Start/End: Original strand, 17264606 - 17264733
Alignment:
Q  475 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttt 574  Q
    ||||||||||||||||||| ||   |||  |||||| ||| |||||| |||||||||||  ||| ||| || ||| |||  ||||||||| | ||  |||    
T  17264606 tttgatttgtaaaactgttacaaaaacataacaaacaggaagcaagatacatgacaaaagctgaaattattatccttcactaaaccacataaaaaaattt 17264705  T
Q  575 tgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||| ||||||||||| ||||||||    
T  17264706 tgtcccacgtacaagttgtgtaaaatac 17264733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1033 - 1124
Target Start/End: Complemental strand, 48338930 - 48338839
Alignment:
Q  1033 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||| || ||||| | |||||||||  |||||||||||||||||  ||||| ||||||  || ||||||||||| |||||||| ||||||    
T  48338930 attggttaaagaatttataaatagaaattttatcttggaaatataagatgttatttttgataaagtaattattacacaacttttttataaaa 48338839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1063 - 1124
Target Start/End: Original strand, 17109561 - 17109622
Alignment:
Q  1063 tatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    ||||||||||||||||||||| || ||| | ||| |||| |||||| |||||||||||||||    
T  17109561 tatcttggaaatataaactgtaacattttattaagtaataattacataactttttaataaaa 17109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 676 - 729
Target Start/End: Original strand, 31883157 - 31883210
Alignment:
Q  676 ttgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    |||||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  31883157 ttgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 31883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 25395824 - 25395638
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact-gga 514  Q
    ||||| ||||||||||||| |||| ||  |||||| | |||||||||||||||  |  |||| | |||||||||||||| ||| ||| |||||  | ||     
T  25395824 ggtgcatttgatttgctaagaaataaatcacatgatataacaactccagttgtacatcgtttta-ttgtaaaactgttttagggacatgacaagttgggg 25395726  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||| | | |||||||| ||| ||| ||||||||||  |||||| |   ||||||||| ||| |  || ||||||||||||||||    
T  25395725 ggcaagacataagacaaaaactgaaattcttgtccctcattaaaccaaaatgcaactttttatcctaaatataagttgtctaaaatac 25395638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 571 - 602
Target Start/End: Complemental strand, 32621924 - 32621893
Alignment:
Q  571 tttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||||||||||||||||||||||||    
T  32621924 tttttgtcccatgtacaagttgtctaaaatac 32621893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 422 - 465
Target Start/End: Original strand, 33841740 - 33841783
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagt 465  Q
    |||||||||||||||||||||||||| || || |||||||||||    
T  33841740 tttgatttgctaaaaaatgaaggacaagataagacaactccagt 33841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1033 - 1128
Target Start/End: Complemental strand, 36436701 - 36436606
Alignment:
Q  1033 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    |||||| ||| |||| |||||||||||   | ||||| ||||||||||| ||| ||||||  || |||||||| ||  ||||||||||||||||||    
T  36436701 attggttaagcaatttaaaaatagaaattatgtcttgtaaatataaacttttatttttgatcaaataattattgcactactttttaataaaatctt 36436606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1070 - 1125
Target Start/End: Original strand, 49419085 - 49419140
Alignment:
Q  1070 gaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 1125  Q
    |||||||||| ||| |||||| | |||||||| |||||| ||||||||||||||||    
T  49419085 gaaatataaattgtcactttttattaactaataattacataactttttaataaaat 49419140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1124
Target Start/End: Complemental strand, 4020218 - 4020124
Alignment:
Q  1030 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||| |||| |||||||  | |||||||||  || ||||| ||||||||| ||||| |||||| ||| ||||||||||| || ||||| ||||||    
T  4020218 gacaatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaa 4020124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 523 - 601
Target Start/End: Original strand, 14155443 - 14155520
Alignment:
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||||||| ||| |||||  |||||||  ||| || | |||||||||||||| || |||||||||||||||||||    
T  14155443 acatgacaaaaactgaaatttta-tccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaata 14155520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1065 - 1123
Target Start/End: Original strand, 44291258 - 44291316
Alignment:
Q  1065 tcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaa 1123  Q
    ||||||||||||||||||| |||||| | ||| |||| ||||||  |||||||||||||    
T  44291258 tcttggaaatataaactgtcactttttattaagtaataattacattactttttaataaa 44291316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 406 - 519
Target Start/End: Complemental strand, 30259091 - 30258979
Alignment:
Q  406 ttatgttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacagga 505  Q
    |||| |||||||||||| |||| ||| ||||||||||||||| |||   ||||| | |||| |  | |||||||||||||||| |||||||   ||||||    
T  30259091 ttattttaaaggtgcgtctgatatgc-aaaaaatgaaggacaagacgcgacaaccctagttatacaatgtttgatttgtaaaattgtttcaaagacagga 30258993  T
Q  506 caaactggaggcaa 519  Q
     ||||| |||||||    
T  30258992 taaactcgaggcaa 30258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 565 - 602
Target Start/End: Original strand, 41694925 - 41694962
Alignment:
Q  565 cacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||||||||  |||||||||||||||||||    
T  41694925 cacaactttttgtcccacatacaagttgtctaaaatac 41694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 1e-78; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 10485366 - 10485181
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  10485366 ggtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacaggacaaactggag 10485267  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10485266 gcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 10485181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 1e-75
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 3259890 - 3259706
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3259890 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 3259791  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  3259790 aagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaatac 3259706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 24203571 - 24203385
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  24203571 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactatagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggag 24203472  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24203471 gcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 24203385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 3e-70
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 15276857 - 15277040
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15276857 ggtgcatttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaggtacaggacaaactggag 15276956  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  15276957 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttgtctaaaa 15277040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 420 - 602
Target Start/End: Complemental strand, 10960205 - 10960023
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10960205 cgtttgatttgctaaaaaatgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaa 10960106  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10960105 gggacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 10960023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 166845 - 167029
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||| |||||| |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  166845 tgcgtttgatttgctaaaaaatgaaggatatgacagaacaactctacttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggc 166944  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  |||| ||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  166945 aagggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 167029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 11613711 - 11613897
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  11613711 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaatggag 11613810  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |||| |||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  11613811 acaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaatac 11613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 15277200 - 15277386
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| | ||||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  15277200 ggtgcgtttgatttgctaaaaaatgaaagacaagacaaaacaactctatttgtccagtgtttgatttgtaaaattgtttaaggtacaggacaaactggag 15277299  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  15277300 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaatac 15277386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 17868044 - 17867858
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17868044 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 17867945  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  17867944 gcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaatac 17867858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 17877827 - 17877641
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17877827 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 17877728  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  17877727 gcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaatac 17877641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 32409772 - 32409958
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  32409772 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaataactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 32409871  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||  ||| |||||||| | |||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  32409872 acaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaatac 32409958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 3932729 - 3932913
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||||| |||| ||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  3932729 tgcgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 3932828  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||   || |||||||| | ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3932829 aaggggcaggacaaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 3932913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 11382271 - 11382087
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11382271 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggag 11382172  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | ||||||||||  |||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  11382171 gcaagggacaggacaaaaactcatatttttgt--ctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 11382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 2615100 - 2614919
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  2615100 gtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaaattgtttcaggtacaggacaaattggaggcaag 2615001  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  2615000 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 2614919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 34177044 - 34176853
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||||   |||||||||||||||||||||||||||||| |||||||    
T  34177044 ttaagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtcacttgtttgatttgtaaaactgtttcaggtacatgacaaac 34176945  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  |||||||||||| | ||||||||||| |||| |||| |||| ||||||||||||||||| |||||||| |||||||||||    
T  34176944 tggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtctaaaatac 34176853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 420 - 602
Target Start/End: Complemental strand, 11279333 - 11279151
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||     
T  11279333 cgtttgatttgctaaaaaatgaaagacgggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcat 11279234  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  11279233 gggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 11279151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 420 - 602
Target Start/End: Original strand, 10324035 - 10324217
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||||||||||||||||||||||  ||| |||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  10324035 cgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaa 10324134  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  10324135 gggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 10324217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 446 - 602
Target Start/End: Complemental strand, 24242843 - 24242687
Alignment:
Q  446 catgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatattttt 545  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||| | ||||||||    
T  24242843 catgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacacaacaaaaactcatattttt 24242744  T
Q  546 gtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24242743 gtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 24242687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 420 - 602
Target Start/End: Complemental strand, 3379915 - 3379733
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||||||||||||||||||||||||| | |||||||  ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  3379915 cgtttgatttgctaaaaaatgaaggacatgatagaacaactttagttgtccagtgtttgatttataaaactgtttcagatacaggacaaactggaggcaa 3379816  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    || ||| |||||||| ||||||||||||| |||| ||||||| | |||||||||||||| ||  |||||||||||| ||||||    
T  3379815 gagacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaatac 3379733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 11212465 - 11212280
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||  |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  11212465 gtgcgtttgatttgctaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaga 11212366  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |||  |||||||||||| | ||| |||||||||||| ||||||||| || ||| ||||||| || || |||||||||||||||||    
T  11212365 taagggacatgacaaaaactcatacttttgtccctcaccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaatac 11212280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 14925376 - 14925562
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||| | |||||||||||||||| ||||  |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||     
T  14925376 ggtgcgtttgattcgttaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagat 14925475  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | |||  ||| |||||||| | |||||||||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  14925476 gtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaatac 14925562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 32860260 - 32860074
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  32860260 ggtgcgtttgatttgataaaaaatgaaggacatgacaaaacaactccaattgtccagtgtttgatttgtaaaacagtttcagggacatgacaaactggag 32860161  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||  ||  |||||||||| ||  ||||||||| |||||| ||||||| || ||||||||| ||||||||||    
T  32860160 gcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaaccttttgtctcacgtacaagttttctaaaatac 32860074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 31870012 - 31870206
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcagg---tacaggaca 507  Q
    |||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||| |||||    |||| |||    
T  31870012 ttaagggtgcgtttgatttgctaaaaaatgaaggactggacataacaactccagttgtccagtgtttgatttgtaaaactgtctcaggaacaacagaaca 31870111  T
Q  508 aactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| ||||||||  |||  ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  31870112 aactagaggcaagggacaaaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatac 31870206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 11675289 - 11675480
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||||  || |||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  11675289 ttaagggtgcgtttgatttgctaaaaaaataaagacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaac 11675388  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||   ||| |||||||| ||||||||||||| |||| ||||||| | ||||||||||| ||||| ||||||| | | ||||||||    
T  11675389 tggaggcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaactttttatcccacgtacaagctttgtaaaatac 11675480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 9902580 - 9902764
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||| | || | ||||||| |||||||  ||||||| ||||||  |||||||||||||| |||||||||| ||||     
T  9902580 tgcgtttgatttgctaaaaaatgaaggataggatagaacaacttcagttgttcagtgtttaatttgttgaactgtttcaggtataggacaaactagaggt 9902679  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| ||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9902680 aagggacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 9902764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 8177803 - 8177987
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||| || || ||  ||||||||||| |||||||||||||||||||  ||||||||||||    
T  8177803 gtgcgattgatttgctaaaaaataaaggacatgaaaaaacaacttcaattatccggtgtttgatttataaaactgtttcaggtacaaaacaaactggagg 8177902  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| || ||||| |||||||||||||||| | ||||||||| ||||||||||||||||| || |||||||||||||||||    
T  8177903 caagggacaggataaaaa-tgatatttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaatac 8177987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 415 - 602
Target Start/End: Complemental strand, 17443467 - 17443285
Alignment:
Q  415 aggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||||||||||||||||||||| |||||     ||  ||||||| |||||||||||||||||||  |||||||||||||||||||| ||    
T  17443467 aggtgcgtttgatttgctaaaaaatgaaggacaggacaa-----ctttagttgtccagtgtttgatttgtaaaaccatttcaggtacaggacaaactaga 17443373  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |||||  ||| |||||||| | |||||||| ||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||    
T  17443372 tgcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatac 17443285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 32132342 - 32132485
Alignment:
Q  458 actccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaa 557  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||  ||| |||||||| | |||||||||||||||| |||    
T  32132342 actctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaa 32132441  T
Q  558 accacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
     ||||| ||||||||||||||||| |||||||||||||||||||    
T  32132442 tccacaacacaactttttgtcccacgtacaagttgtctaaaata 32132485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 18057728 - 18057542
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||| |||||||||||||||||| || |  |||||| || ||||| | |||||||||||||||||||||| || |||| |||||||| ||     
T  18057728 ggtgcgtttgattcgctaaaaaatgaaggacaggataggacaacttcaattgtccaatgtttgatttgtaaaactgtttgagatacatgacaaactagat 18057629  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | |||  |||||||||||| | |||||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||    
T  18057628 gtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatac 18057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 417 - 599
Target Start/End: Original strand, 18597079 - 18597261
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||||||||||  ||   ||||| | |||||||  |||||||||||||||||||||||||||| | | ||||||| |||||    
T  18597079 gtgcgtttgatttgttaaaaaatgaaggacgggattgaacaatttcagttgttcagtgtttgatttgtaaaactgtttcagggatatgacaaaccggagg 18597178  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||  |||||||||||  ||| |||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  18597179 caagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtctaaaa 18597261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 463 - 602
Target Start/End: Original strand, 4494081 - 4494221
Alignment:
Q  463 agttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaat-tgatatttttgtccctcagcaaacca 561  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||  ||| ||||||||  | |||||||||||||||| |||||||    
T  4494081 agttgtccagtgtttgatttgtaagactctttcaggtacaggacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaacca 4494180  T
Q  562 catcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||  |||||||||||||||| ||||||||||||||||||||    
T  4494181 cagtacaactttttgtcccacgtacaagttgtctaaaatac 4494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 29054565 - 29054379
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||||||||  ||| || || |  || |||| | ||||||||||||||||| |||||||| |||||||||| ||||     
T  29054565 ggtgcgtttgatttgataaaaaatgaaggacagaacagaataattaaagctgtccaatgtttgatttgtaaaacagtttcaggaacaggacaaattggaa 29054466  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| |   |||||||||||||  ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  29054465 gcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 29054379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 422 - 602
Target Start/End: Complemental strand, 9614177 - 9613997
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    |||||| |||||||||||||||||||| |||| | |||| |||||||  | |||||||||||||||||||||||| | |||||| ||||||||||||||     
T  9614177 tttgatctgctaaaaaatgaaggacataacaagaaaacttcagttgtacaatgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagg 9614078  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||||||||| ||||  |||||||  ||||  ||||| || ||||| ||||||| ||| ||| ||||||||||||||||    
T  9614077 gacatgacaaaatttgaagtttttgttactcactaaaccgcaacacaattttttgttccacgtataagttgtctaaaatac 9613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 3290868 - 3290695
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| ||||||           | ||||||||||    
T  3290868 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtataactgt-----------gtcaaactggag 3290780  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||| | ||||||||| ||||||||||  ||||| ||| ||||||||||||||||    
T  3290779 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt--tcccacgtataagttgtctaaaatac 3290695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 7396048 - 7396231
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||||| | |||||||||||||||| ||||||| || ||| ||||| ||||| ||    
T  7396048 tgcgtttgatttgctaagaaatgaaggacatgacaaaacaatttcagttgtatggtgtttgatttgtaaagctgtttctgggacatgacaagctggaagc 7396147  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||   ||| ||||||||  || | | ||||||||||  |||||||  |||||||||||||| || ||||||||| ||||||||||    
T  7396148 aatggacaggacaaaaacaga-aatcttgtccctcactaaaccactacacaactttttgtctcacgtacaagttatctaaaatac 7396231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 420 - 591
Target Start/End: Complemental strand, 23636428 - 23636257
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||  |||||||||||||||||| ||||| ||||||| || |||||||| ||||    
T  23636428 cgtttgatttgctaaaaaatgaaggatatgacagaacaacttcagttgttcagtgtttgatttgtaaaattgttttaggtacatgataaactggatgcaa 23636329  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagtt 591  Q
    | || | || ||||| | ||||||||||   |||  |||||||| ||||| |||||||| || |||||||||    
T  23636328 ggaataggataaaaactcatatttttgttattcattaaaccacaacacaaatttttgtctcacgtacaagtt 23636257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 417 - 597
Target Start/End: Original strand, 14807939 - 14808102
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||                 | ||||| ||||    
T  14807939 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaa-----------------ataaactagagg 14808021  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaa 597  Q
    ||||  | | || |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| | |||||||||    
T  14808022 caagggataggataaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaa 14808102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Original strand, 17900748 - 17900852
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||     
T  17900748 aaggaatccaaaagtagaaaaattgtcttggagatataaactcttacttttgactaactaattattacaccactttttaataaaatcttacctcttttaa 17900847  T
Q  1140 ctgct 1144  Q
    |||||    
T  17900848 ctgct 17900852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1030 - 1144
Target Start/End: Complemental strand, 11102020 - 11101906
Alignment:
Q  1030 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttg 1129  Q
    |||| |||| ||||||| ||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||     
T  11102020 gacactggttaaggaatccaaaagtagaaaaattatcttaaaaatataaacagttacttttgactaactaattattaaactactttttaataaaatctta 11101921  T
Q  1130 cctcttttagctgct 1144  Q
    |||||||||| ||||    
T  11101920 cctcttttagttgct 11101906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 416 - 494
Target Start/End: Original strand, 14925137 - 14925215
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgttt 494  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||| |||||||||||||||||| |||||    
T  14925137 ggtgcgtttgatttgctaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaattgttt 14925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Original strand, 26608910 - 26609013
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    |||||||  ||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||  ||||||||     
T  26608910 aaggaatctaaaaata-aaaagttgtcttgaaaatataaactgttacttttgactagctaattattacatcactttttaataaaatcttatctcttttaa 26609008  T
Q  1140 ctgct 1144  Q
    |||||    
T  26609009 ctgct 26609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 496 - 599
Target Start/End: Original strand, 34683985 - 34684086
Alignment:
Q  496 aggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtct 595  Q
    ||||||| |||||||||||||||||  ||| |||||||| | ||  |||||||||||| ||||||||| ||||||||||||| ||| |||||||||||||    
T  34683985 aggtacatgacaaactggaggcaagggacacgacaaaaactcat--ttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtct 34684082  T
Q  596 aaaa 599  Q
    ||||    
T  34684083 aaaa 34684086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1035 - 1137
Target Start/End: Complemental strand, 19418710 - 19418608
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 1134  Q
    |||| ||||||| ||||| || ||||||| ||||  ||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||| | |||    
T  19418710 tggttaaggaatccaaaagtaaaaaaattgtcttaaaaatataaactgttacttttgaccagctaattattacatcactttttaataaaatcttacttct 19418611  T
Q  1135 ttt 1137  Q
    |||    
T  19418610 ttt 19418608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1049 - 1137
Target Start/End: Complemental strand, 10253067 - 10252979
Alignment:
Q  1049 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 1137  Q
    |||| |||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||| | ||||||    
T  10253067 aaaagtagaaaaactgtcttgaaaatataaactgttatttttgactaactaattattacatcattttttaataaaatcttacttctttt 10252979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 425 - 599
Target Start/End: Original strand, 9200316 - 9200491
Alignment:
Q  425 gatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc-aagaaa 523  Q
    ||||||||||||| | ||||||| ||||  ||||||| ||||||  | |||||||||||||||||||||| |   ||| |||||||| ||||| |||| |    
T  9200316 gatttgctaaaaagttaaggacaagacatgacaactcaagttgtacaatgtttgatttgtaaaactgttttaaagacatgacaaactagaggctaagaga 9200415  T
Q  524 catgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    || ||||||||   | ||| || ||||||| ||||||| || ||||||||||||||||  ||||| |||| |||||    
T  9200416 caagacaaaaacaaaaattcttctccctcaccaaaccatataacaactttttgtcccacatacaaattgtttaaaa 9200491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1043 - 1144
Target Start/End: Original strand, 22297584 - 22297684
Alignment:
Q  1043 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 1142  Q
    ||||||| || |||||||||| ||||| |||||||||  |||||||||||| ||||||||||||||  || |||||||||||| || | |||||||||||    
T  22297584 gaattcagaagtagaaaaattgtcttgaaaatataaatcgttacttttgacaaactaattattacaccac-ttttaataaaattttacttcttttagctg 22297682  T
Q  1143 ct 1144  Q
    ||    
T  22297683 ct 22297684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 419 - 488
Target Start/End: Complemental strand, 33041472 - 33041403
Alignment:
Q  419 gcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaa 488  Q
    |||||||||||| |||||||||||| | | |||| |||||||||||||||| ||||||||||||||||||    
T  33041472 gcgtttgatttgttaaaaaatgaagaataggacagaacaactccagttgtccagtgtttgatttgtaaaa 33041403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 455 - 601
Target Start/End: Original strand, 35004087 - 35004233
Alignment:
Q  455 acaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcag 554  Q
    ||||||||||||||   |||||||||||||||||| ||||   | ||| || |||| |||| ||||| ||| |||||||| | |  |||||||| ||||     
T  35004087 acaactccagttgtgcggtgtttgatttgtaaaacggtttataggacaagataaaccggagacaagagacaagacaaaaactaaattttttgtctctcat 35004186  T
Q  555 caaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
      ||||||| ||||||| ||||||||| ||||||||| |||||||||    
T  35004187 ataaccacaacacaactctttgtcccacgtacaagttttctaaaata 35004233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 28967221 - 28967316
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 518  Q
    ||||||||||||||||||||||||||||||| || |||| || || |  ||| ||| ||||||||||||||| || | ||| |||||||||||||||    
T  28967221 tttgatttgctaaaaaatgaaggacatgacataa-aacttcaattatagagtctttaatttgtaaaactgttccaagaacatgacaaactggaggca 28967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1030 - 1089
Target Start/End: Original strand, 1970647 - 1970706
Alignment:
Q  1030 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttt 1089  Q
    |||| |||| ||| |||| |||||||| |||||||||||| |||||||||||||||||||    
T  1970647 gacactggttaagaaatttaaaaatagtaaaattatcttgaaaatataaactgttacttt 1970706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 13415928 - 13415861
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaa 488  Q
    |||||||||||||||||| ||| ||||  ||| |||||||| ||||||  ||||||||||||||||||    
T  13415928 gtttgatttgctaaaaaacgaaagacagaacataacaactctagttgtacagtgtttgatttgtaaaa 13415861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1062 - 1124
Target Start/End: Complemental strand, 18493331 - 18493269
Alignment:
Q  1062 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||| ||||||||| ||||||||||||  || ||||||||||| |||||||| ||||||    
T  18493331 ttatcttgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaa 18493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1035 - 1128
Target Start/End: Complemental strand, 34301963 - 34301869
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaa-ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    |||| |||||||||||||||| ||||| |||| |   || ||||||||||||  |||||| |||||||||||| |  ||||||||||||||||||    
T  34301963 tggttaaggaattcaaaaataaaaaaaattatttaaaaattataaactgttatgtttgaccaactaattattataccactttttaataaaatctt 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 29424498 - 29424570
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgttt 494  Q
    |||||||||||| ||||| ||||||||||||  ||||||| | || | |||||||| |||||||||| |||||    
T  29424498 tttgatttgctagaaaataaaggacatgacatgacaactctaattctatagtgttttatttgtaaaattgttt 29424570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 520
Target Start/End: Original strand, 27824619 - 27824677
Alignment:
Q  462 cagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||||||  ||||||||||||||||||||||||  || | |||||||||| ||||||||    
T  27824619 cagttgtacagtgtttgatttgtaaaactgtttttgggaaaggacaaactagaggcaag 27824677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 544 - 602
Target Start/End: Original strand, 27824698 - 27824756
Alignment:
Q  544 ttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  | |||||||||||||||||||||||| |||| |||| || |||||||    
T  27824698 ttgtccctcattataccacatcacaactttttgtcccacgtacgagttatccaaaatac 27824756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 667 - 721
Target Start/End: Original strand, 31870271 - 31870325
Alignment:
Q  667 tgtcatttattgttctcccttatattttgctgttctttcttatactattatgtac 721  Q
    |||||| | ||||||||||||||||| || ||||||||||| |||| ||||||||    
T  31870271 tgtcatgtgttgttctcccttatattgtgttgttctttcttgtactgttatgtac 31870325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 468 - 553
Target Start/End: Original strand, 5650677 - 5650761
Alignment:
Q  468 tctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctca 553  Q
    |||||| ||||||||||| |||| ||||||| ||| ||||||||| |||||| | | | |||||||| ||| |||||||| |||||    
T  5650677 tctagtatttgatttgtagaactatttcagg-acaagacaaactgaaggcaatagatacgacaaaaactgaaatttttgttcctca 5650761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 421 - 515
Target Start/End: Complemental strand, 34402992 - 34402903
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||| ||||||||| |||||| |||| ||||||| || ||||| ||||    |||||||||| ||||||||| |||  |||||||||||    
T  34402992 gtttgatttgttaaaaaatggaggacaagacagaacaacttcaattgtccagtg----atttgtaaaattgtttcagg-acaaaacaaactggag 34402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 1e-78; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 44649038 - 44649223
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  44649038 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttatccagtttttgatttgtaaaactgtttcaggtacaggacaaactggag 44649137  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44649138 gcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaata 44649223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 3e-76
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 52949932 - 52949747
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  52949932 ggtgcgtttgatttgttaaaaaatgaaggacacgacaaaacaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaactggag 52949833  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  52949832 gcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 52949747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 50178366 - 50178552
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50178366 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 50178465  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac-tttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  50178466 gcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaata 50178552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 23522092 - 23521906
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  23522092 ggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaa 23521993  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  | | |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  23521992 gcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 23521906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 50727787 - 50727973
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  50727787 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaag 50727886  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  50727887 gcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 50727973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 50735801 - 50735987
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  50735801 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaag 50735900  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  50735901 gcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 50735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 36497429 - 36497244
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36497429 ggtgcgtttgatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 36497330  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
     ||||| ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||    
T  36497329 acaagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaata 36497244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 38486131 - 38486316
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  38486131 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggag 38486230  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  |||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||  | |||||||||||||||||||    
T  38486231 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaata 38486316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 24002551 - 24002365
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24002551 ggtgcgtttgatttgctaaaaaatgaaggacagtacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggag 24002452  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24002451 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 24002365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 20802406 - 20802591
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||||||||| | |||| |||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  20802406 gtgcgtttgatttgttaaaaaatgaaggataggacagaacaactttagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 20802505  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20802506 caagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 20802591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 38812731 - 38812546
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||| |||||||||||||| ||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38812731 gtgcgtttcatttgctaaaaaataaaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 38812632  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38812631 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 38812546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 410 - 602
Target Start/End: Complemental strand, 36886150 - 36885958
Alignment:
Q  410 gttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  36886150 gttaagggtgcgtttgatttgctaaaaaataaaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaa 36886051  T
Q  510 ctggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||| ||||| |||||| |||||||||||||    
T  36886050 ctggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaatac 36885958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 44324211 - 44324402
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44324211 ttaagggtgcgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaac 44324310  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||||||| | ||  |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| | ||||||    
T  44324311 tagaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgttttaaatac 44324402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 2629825 - 2630011
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  2629825 ggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgtttcaggtacaggacaaactagag 2629924  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   |||||||||||| | |||||||||||||||| || |||| |||||||||||||||| || ||||||||||||||||||||    
T  2629925 gcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttgtctaaaatac 2630011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 12601098 - 12600912
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  12601098 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggag 12600999  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      |||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  12600998 ataagggacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 12600912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 33552716 - 33552902
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||     
T  33552716 ggtgcgtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaattggat 33552815  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33552816 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 33552902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 36743563 - 36743748
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  36743563 ggtgcgtttgatttgctaaaa-atgaaggatataacaaaacaactctagttgttcagtgtttgaattgtaaaactgtttcaggtacaggacaaactggag 36743661  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  36743662 gcaagggacatgacaaaaattcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaatac 36743748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 1231523 - 1231338
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| | |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  1231523 ggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggag 1231424  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||  |||||||| | ||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||    
T  1231423 gcaagagactggacaaaaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 1231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 411 - 599
Target Start/End: Complemental strand, 3649853 - 3649665
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  3649853 ttaagggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcagggacagaacaaac 3649754  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    || |||||||  ||| |||||||| | | |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  3649753 tgaaggcaagggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 3649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 29785405 - 29785597
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  29785405 ttaagggtgcgtttgatttgctaaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaa 29785504  T
Q  510 ctggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||||  |||  ||||||| | |||||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  29785505 ctggagacaagggacagaacaaaaactcatatttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaatac 29785597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 420 - 602
Target Start/End: Original strand, 2725011 - 2725192
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  2725011 cgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaa 2725110  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  2725111 gggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgt-ccacgtacaagttgtctaaaatac 2725192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 11056254 - 11056068
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||| || || ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11056254 ggtgcgtttgatttgctaaaaaatgaaggtcaggataaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 11056155  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| |||||||||||||||| | ||||||||| ||||||||| |||||||||||||  ||||| |||||||    
T  11056154 gcaagggacaagacaaaaactgatatttttgtcccttaccaaaccacaacacaactttatgtcccatgtacagattgtcaaaaatac 11056068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 9512216 - 9512400
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||||||| ||||||||||| | |||||||| ||||||  |||||||||||||||||||||||||||||||| || |||||||||||    
T  9512216 tgcgtttgatttgctaaaaaacgaaggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggc 9512315  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||| |||| |||||||| | |||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9512316 aagtaacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 9512400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 434 - 602
Target Start/End: Complemental strand, 37865947 - 37865779
Alignment:
Q  434 aaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaa 533  Q
    |||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  37865947 aaaaatgaaggacacgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaa 37865848  T
Q  534 attgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | | |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  37865847 actcatatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaatac 37865779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 420 - 602
Target Start/End: Original strand, 33176910 - 33177092
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||| ||||| |||||| ||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33176910 cgtttgatttgctaaaaaataaaggatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 33177009  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  33177010 gggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttgtctaaaatac 33177092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 46680384 - 46680570
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| ||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  46680384 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 46680483  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||| | ||||||||| |||||||||||||| || |||||| |||||||||||||    
T  46680484 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaatac 46680570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 50729416 - 50729602
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  50729416 ggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggag 50729515  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| ||| |||||||||  ||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  50729516 gcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 50729602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 56154833 - 56154647
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||  | |||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  56154833 ggtgcgtttgatttgctaaaaaatgaaggttaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggaaaaactggag 56154734  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||  ||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  56154733 gcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 56154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 20517895 - 20518082
Alignment:
Q  416 ggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  20517895 ggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactgga 20517994  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||| ||| |||||||| | |||||||||||||||| |||| |||| || ||||| |||||||| ||||||||||||||||||||    
T  20517995 ggcaagagacaggacaaaaagtcatatttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaatac 20518082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 417 - 599
Target Start/End: Complemental strand, 2787175 - 2786993
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| |    
T  2787175 gtgcgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatg 2787076  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||  ||| |||||||| | |||||||||||| |||  |||||||||||||| ||||||||||| |||||| || |||||||    
T  2787075 caagggacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatttttgtcccacgtacaaattatctaaaa 2786993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 439 - 601
Target Start/End: Original strand, 47642388 - 47642550
Alignment:
Q  439 tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattga 538  Q
    ||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| || ||||| |||    
T  47642388 tgaaggacaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaactga 47642487  T
Q  539 tatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  47642488 tatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 47642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 22318258 - 22318441
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||| |||| |||||||| ||    
T  22318258 ggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaaccccagctgtctagtgtttgatttgtaaaactgttttagggacagaacaaactgaag 22318357  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||| ||| ||||||| |||| |||||||||||||| ||||||||| ||||||||||||||  | ||| |||||||||||||    
T  22318358 gcaagagacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaa 22318441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 42870182 - 42870000
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||||| ||    
T  42870182 gtgcgtttgatttgctaagaaatgaaggacatgacataacaactctagttgtccggtgtttgatttgtaaaactgtttctggtacaggacaaactggggg 42870083  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| ||| |||||||| | |||||||||||||||| ||||||||| ||||||   |||||||| ||| ||||||||||||||||    
T  42870082 caagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaac---ttgtcccacgtataagttgtctaaaatac 42870000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 415 - 601
Target Start/End: Original strand, 55065206 - 55065392
Alignment:
Q  415 aggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||| |||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  55065206 aggtgcgtttaatttgctaaaaaat-aaggacatgacagaacaactctagttattcagtgtttgatttgtaaaactgtttcaggtacaagacaaactgga 55065304  T
Q  515 gg-caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    || ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  55065305 gggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 55065392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 21580237 - 21580052
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| |||| ||||| || | ||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  21580237 ggtgcgtttgatttgctaaaaaat-aaggacaggacagaacaattctaattgtccagtatttgatttgtaaaactgtttcaggtacaggacaaattggag 21580139  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| || |||||| |||||||||||||    
T  21580138 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattgtctaaaatac 21580052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 417 - 599
Target Start/End: Complemental strand, 29593106 - 29592924
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  29593106 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaccttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggatg 29593007  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||  |||||||||||| | |||||||||| | |||  |||||||| |||||||||||||||||  || |||||||||||||    
T  29593006 caagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacataaaagttgtctaaaa 29592924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 421 - 599
Target Start/End: Complemental strand, 39078868 - 39078690
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  39078868 gtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 39078769  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    | | | |||||||  ||| |||||||||||||| ||||||||| ||||| ||||||||| | |||| ||||||||||||    
T  39078768 agataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttgtctaaaa 39078690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 4326002 - 4325817
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  4326002 gtgcgtttgatttgctaaaaaataaagtacaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggagg 4325903  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| || ||||| | ||||||||||| ||||  ||||| || ||||||||||||||||| ||||||||||||||||||||    
T  4325902 caagggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaatac 4325817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 28115462 - 28115278
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||| |||||||||||||||||||||| | | | || |||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  28115462 gtgcatttgatttgctaaaaaatgaagcaaagggcagaacaactcaagttgtctagtgtttgatttgtaaaactgtttt-ggtacaagacaaactggagg 28115364  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| || |||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  28115363 caagggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 28115278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 416 - 600
Target Start/End: Complemental strand, 52319540 - 52319351
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaaca-----actccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    ||||||||||||||| |||||||||||||||| |||| ||||     |||| ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  52319540 ggtgcgtttgatttgttaaaaaatgaaggacaggacagaacagaacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaac 52319441  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaat 600  Q
    ||||||||||  ||| ||| |||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  52319440 tggaggcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaat 52319351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 441 - 601
Target Start/End: Complemental strand, 21202926 - 21202766
Alignment:
Q  441 aaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgata 540  Q
    ||||||| |||| |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| | |||    
T  21202926 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcata 21202827  T
Q  541 tttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
     |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  21202826 attttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 21202766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 32181473 - 32181289
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||| | ||||  ||||||  ||||||| |||||||||||||||||||||||||| |||||||||||||| || ||    
T  32181473 tgcgtttgatttgctaaaaaatgaaggataggacatgacaactttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactagatgc 32181374  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||    
T  32181373 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatac 32181289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 29616378 - 29616196
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttc-aggtacaggacaaactgga 514  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  29616378 ggtgcgtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaaggtacaggacaaactgga 29616279  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||  ||| |||||||| | ||||||||||||||      |||||| ||||||||||||||||| |||||| |||||||||||||    
T  29616278 ggcaagggacaggacaaaaactcatatttttgtccct-----gaccacagcacaactttttgtcccacgtacaaattgtctaaaatac 29616196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 417 - 599
Target Start/End: Original strand, 53200518 - 53200701
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||||||||||| |||| || |||| ||| ||| |||||||||||||| |||||||||||||  |||||| ||||||||||    
T  53200518 gtgcgtttgatttgttaaaaaatgaaggacaagacataataacttcagctgtttagtgtttgatttgcaaaactgtttcagagacaggataaactggagg 53200617  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac-tttttgtcccatgtacaagttgtctaaaa 599  Q
    |||| ||||||||||||| ||| |||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||    
T  53200618 caaggaacatgacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaa 53200701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 417 - 599
Target Start/End: Complemental strand, 6776789 - 6776607
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||| || || ||||| || ||||| ||||||    
T  6776789 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggagg 6776690  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  6776689 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaa 6776607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 418 - 599
Target Start/End: Original strand, 49151976 - 49152157
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||||||||||||||||  ||| |||||||  |||| || ||||||| |||||||||||||||||||||||| ||||||||||| ||    
T  49151976 tgcgtttgatttgctaaaaaatgaaggacagaacagaacaactttagttatccagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgc 49152075  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||    
T  49152076 aagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaa 49152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 55594096 - 55593911
Alignment:
Q  418 tgcgtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||| ||||| ||| |||| |||||||| ||||||| ||| |||||||||||||||||||||||||||| || ||||||||||    
T  55594096 tgcgtttgatttgctaaaaaaatgaagaacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacatgataaactggagg 55593997  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | ||||||| |||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  55593996 caagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaatac 55593911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 422 - 602
Target Start/End: Complemental strand, 24210525 - 24210345
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||||||||||||||||| || | |||  |||||||| | |||||  |||||||||||||||||||||||||||||||||||||||||||||||||     
T  24210525 tttgatttgctaaaaaatgaaagataggacggaacaactctaattgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 24210426  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||| |||||||| | ||||| |||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  24210425 gacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaatac 24210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 54543198 - 54543016
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| ||||| |||||||||||| |||||||    
T  54543198 tgcgtttgatttgctaaaaaatgaag-acatgacagaacaactctagttgttcagtgtttgatttgtaaaactatttcaagtacaggacaaattggaggc 54543100  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||||||||||| ||||||| | |||||| |||||||||| ||||||||||||||||||||    
T  54543099 aagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaac-ttttgtcccacgtacaagttgtctaaaatac 54543016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 415 - 602
Target Start/End: Original strand, 47361286 - 47361469
Alignment:
Q  415 aggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  47361286 aggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaccgg 47361385  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  ||| ||| |||||| |||||||||||||||| ||||||||| |||||||||||||||     ||||||||||||||||||    
T  47361386 aggcaagggacaagac-aaaattcatatttttgtccctcaccaaaccacaacacaactttttgtcc----aacaagttgtctaaaatac 47361469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 16320730 - 16320545
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||| ||||||||||| ||||||  |||| |||||||||||||||| ||| |||||||||||||||||| ||||||| |||| |||||||||    
T  16320730 ggtgcgtttgatatgctaaaaaat-aaggactggacagaacaactccagttgtccagtatttgatttgtaaaactgtctcaggtataggaaaaactggag 16320632  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||| |||||||||    
T  16320631 gcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttgcctaaaatac 16320545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 20694578 - 20694397
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||| |||||||||  ||| |||||||| ||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||     
T  20694578 gtttgatttgctaaaaactgaaggacaacacagaacaactctagttgtccagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaa 20694479  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||| | |||||||||||||||| ||||||||| | ||||||||||||| | ||||||||||||||||||||    
T  20694478 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaatac 20694397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 26083549 - 26083368
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||| ||||| || |||||||||||||  ||| ||||||| ||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||    
T  26083549 ggtgcgtttaatttgttagaaaatgaaggaca--acagaacaacttcagttgtttagtgtttgatttgtaaaattgtttcagggacagaacaaactggag 26083452  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  |||||||||||| ||| |||||||||||||| ||||||||| || ||||||||||||||  ||||||||||||||||    
T  26083451 gcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtctaaaa 26083368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 417 - 595
Target Start/End: Original strand, 25978487 - 25978664
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||| |||||||||||||||||||| || || || |||||||||||||||||||||||||||| ||| |||||| ||||||    
T  25978487 gtgcgtttgatttgttaaaaaataaaggacatgacaaaacaacttcaattatccagtgtttgatttgtaaaactgtttcagg-acatgacaaattggagg 25978585  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtct 595  Q
    |||  |||| |||||||| ||| |||||||||||||| ||||||| |||||||||||||||| ||  ||||||||||||    
T  25978586 caatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgtct 25978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 50186740 - 50186554
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| || | |||||||| ||||||  |||||||||||||||||| ||||| |||| ||||||||||| |||    
T  50186740 ggtgcgtttgatttgctaaaaaatgaaggacaagaaagaacaactctagttgttcagtgtttgatttgtaaaattgttttaggtgcaggacaaactagag 50186641  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||  || ||||| | |||||||||||||||| ||||||||| ||||||||||| |||||  |||||||||||||||||||    
T  50186640 gcaagggacgggataaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacatacaagttgtctaaaatac 50186554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 41712057 - 41711873
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||| |||||||||||| || |  ||| |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  41712057 tgcgtttgatttactaaaaaatgaatgatagaacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaggacaaactgaaggc 41711958  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||| | | |||||||||||||||| |||||||||  ||||||||||||| || ||||| ||||||||||||||    
T  41711957 aagggacaggacaaagactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaatac 41711873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 92; E-Value: 5e-44
Query Start/End: Original strand, 414 - 581
Target Start/End: Complemental strand, 42773002 - 42772835
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||||||||||||   ||||||||||| ||||||||| |||||||  |||| || |||||||||||||||||| ||||||||||||| |||||||| |    
T  42773002 aaggtgcgtttgattcattaaaaaatgaatgacatgacataacaactttagttttcaagtgtttgatttgtaaaattgtttcaggtacatgacaaacttg 42772903  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtccca 581  Q
    |||||||| ||| |||||||| | |||||||||||| ||| ||||||||| |||||||||||||||||    
T  42772902 aggcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtccca 42772835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 9807372 - 9807182
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| ||||||||||||||||||||| |||||||| | ||||  |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  9807372 ttaagggtgcgtttgatttgctaaaacatgaaggataggacaggacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaac 9807273  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | || ||||   ||| |||||||| | |  ||||||| ||||| |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  9807272 tagatgcaatggacaggacaaaaactcaactttttgt-cctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaatac 9807182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 411 - 599
Target Start/End: Original strand, 7554826 - 7555014
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||| |||| || |||||| ||||| | ||| |||| |||||||||||||||||||||||||| |||||  ||||||    
T  7554826 ttaagggtgcgtttgatttgctaaaaagtgaaagatatgacagaacaatttcagctgtccagtgtttgatttgtaaaactgtttcatgtacaaaacaaac 7554925  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    || | |||||| |||||| ||||| |  ||||||||||| |||  |||||| | |||||||||||||| || |||||||||||||||||    
T  7554926 tgaatgcaagagacatgataaaaactcgtatttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtctaaaa 7555014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 433 - 601
Target Start/End: Complemental strand, 34930110 - 34929942
Alignment:
Q  433 aaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaa 532  Q
    ||||||| |||  ||||||| || ||||| | ||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||  ||| ||||||    
T  34930110 aaaaaataaagatcatgacagaataactctaattgtccagtgtttgatttgtaaaactgtttcagatacagaataaactggaggcaagggacaggacaaa 34930011  T
Q  533 aattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    || | |||||||||| ||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  34930010 aactcatatttttgttcctcaccaaaccacagcacaactttttgccccatatacaagttgtctaaaata 34929942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 417 - 575
Target Start/End: Original strand, 6973788 - 6973946
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| || | |||||||   |||||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  6973788 gtgcgtttgatttgctaaaaaatgaaggacaggatagaacaacttttgttgtccagtgtttgatttgtaaaactgtttcaggtactggacaaacgggagg 6973887  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttttt 575  Q
    |||   ||| |||||||| | ||| |||||||||||  ||||||||| |||||||||||    
T  6973888 caattgacaggacaaaaactcataattttgtccctcgccaaaccacaacacaacttttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 471 - 601
Target Start/End: Original strand, 37695470 - 37695600
Alignment:
Q  471 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac 570  Q
    ||||||| ||||| |||||||||||||||||| || ||| |||||| |||| ||| |||||||| |||||||||||||||||| ||||||||| ||||||    
T  37695470 agtgttttatttggaaaactgtttcaggtacatgataaattggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaac 37695569  T
Q  571 tttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||||||| ||||| |||||||||||||    
T  37695570 tttttgtcccacgtacaggttgtctaaaata 37695600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 418 - 550
Target Start/End: Complemental strand, 14296777 - 14296645
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||| ||||||| |||| |||||||| | ||||| |||||||||||||||||| ||||||||||| |||||||||| |||||    
T  14296777 tgcgtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggc 14296678  T
Q  518 aagaaacatgacaaaaattgatatttttgtccc 550  Q
    |||  ||| |||||||| | |||||||||||||    
T  14296677 aagggacaggacaaaaactcatatttttgtccc 14296645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 418 - 550
Target Start/End: Complemental strand, 14315025 - 14314893
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||| ||||||| |||| |||||||| | ||||| |||||||||||||||||| ||||||||||| |||||||||| |||||    
T  14315025 tgcgtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggc 14314926  T
Q  518 aagaaacatgacaaaaattgatatttttgtccc 550  Q
    |||  ||| |||||||| | |||||||||||||    
T  14314925 aagggacaggacaaaaactcatatttttgtccc 14314893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Original strand, 50086635 - 50086739
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||    
T  50086635 aaggaatccaaaagtagaaaaattgtcttggaaatataaactgttacttttaactaactaattattacaccattttttaataaaatcttgcctcttttag 50086734  T
Q  1140 ctgct 1144  Q
    |||||    
T  50086735 ctgct 50086739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 417 - 548
Target Start/End: Original strand, 56487162 - 56487288
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||||||     |||||||||||||||||||||||| || |||||||||| ||||    
T  56487162 gtgcgtttgatttgctaaaaaatgaaagacatgacagaacaactctagttgt-----gtttgatttgtaaaactgtttcagatataggacaaacttgagg 56487256  T
Q  517 caagaaacatgacaaaaattgatatttttgtc 548  Q
    ||||  ||| |||||||||| |||||||||||    
T  56487257 caagggacaggacaaaaatttatatttttgtc 56487288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 1043 - 1144
Target Start/End: Complemental strand, 16072449 - 16072348
Alignment:
Q  1043 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 1142  Q
    |||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||| |||||||||||||    
T  16072449 gaatccaaaagtagaaaaattgtcttggaaatataaaccgttacttttgactaactaattattacatcattttttaataaaatcttacctcttttagctg 16072350  T
Q  1143 ct 1144  Q
    ||    
T  16072349 ct 16072348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 23328107 - 23328015
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||||  |||||||| |||||||||||||||||||||||||||||    
T  23328107 gtgcgtttgatttgctaaaaaatgaaggatatgacagaacaactctagttgtcatgtgtttgacttgtaaaactgtttcaggtacaggacaaa 23328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1040 - 1138
Target Start/End: Original strand, 49649891 - 49649989
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 1138  Q
    ||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  49649891 aaggaatccaaaaataaaaaaattatgttggaaatataaacggttacttttgactaactaattattacataactttttaataaaatattatctctttta 49649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 414 - 599
Target Start/End: Complemental strand, 30943002 - 30942817
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||| |||||||||| |||||||| ||||| | |||| ||||||||||||| |  |||||||||||| ||||||||||||||| |||| ||||| |||    
T  30943002 aaggtgtgtttgatttgttaaaaaat-aaggataagacagaacaactccagttattcagtgtttgatttataaaactgtttcagggacagaacaaattgg 30942904  T
Q  514 aggcaagaaacatgac-aaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||||| ||  ||| ||||| ||| |||| |||| |||| ||||||||| |||||| ||||| | ||  || |||||||||||||    
T  30942903 aggcaagagacgggacaaaaaactgaaatttctgtctctcaccaaaccacaacacaacattttgcctcacatataagttgtctaaaa 30942817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 422 - 591
Target Start/End: Complemental strand, 9948135 - 9947966
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||||| ||||||| | ||||||| | |  |||| | || |||| || |||||||||||||||||||||| ||| ||| |||||||| |||||||||    
T  9948135 tttgatttgttaaaaaacggaggacatcaaatgacaatttcaattgtataatgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaaga 9948036  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagtt 591  Q
     |||||||||||| | | ||| || |||||||  ||||||||| ||||||||||||| || |||||||||    
T  9948035 gacatgacaaaaactaaaattcttatccctcactaaaccacattacaactttttgtctcacgtacaagtt 9947966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 416 - 575
Target Start/End: Original strand, 44355729 - 44355887
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||| || |||||||||||||| |||| |  |||| || |||||| | |||||||||||||||| |||||| ||| | ||||||||||||||    
T  44355729 ggtgtgtttgatatgttaaaaaatgaaggatatgatatgacaaatctagttgtgtggtgtttgatttgtaaa-ctgttttagggataggacaaactggag 44355827  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttttt 575  Q
    | |||| | | |||||||||||| ||||||||||||||  |||||||| ||||| |||||    
T  44355828 gtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttt 44355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 43641200 - 43641125
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  43641200 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 43641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1007 - 1125
Target Start/End: Complemental strand, 27655448 - 27655329
Alignment:
Q  1007 tcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttac--ttttgactaactaattat 1104  Q
    |||||||||| |||||||| || |  |||||| ||||||| | ||| |||||||||| |||| |||||||||||||||||  ||||||||||||||||||    
T  27655448 tcttgttaaccagtgtctctggggt-attggttaaggaatgctaaagtagaaaaattgtcttagaaatataaactgttacttttttgactaactaattat 27655350  T
Q  1105 tacagaactttttaataaaat 1125  Q
    ||||  |||||||||||||||    
T  27655349 tacaccactttttaataaaat 27655329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1035 - 1144
Target Start/End: Original strand, 40161032 - 40161141
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 1134  Q
    |||| |||||||  |||| || ||||||||||||| |||||||||| |||| ||||||||  ||||||||||||  |||||||||||||||||| |||||    
T  40161032 tggttaaggaatctaaaagtaaaaaaattatcttgaaaatataaaccgttatttttgactgcctaattattacaccactttttaataaaatcttacctct 40161131  T
Q  1135 tttagctgct 1144  Q
    |||| |||||    
T  40161132 tttacctgct 40161141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 23328020 - 23327944
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaact-ttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| | |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  23328020 gacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaatac 23327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1030 - 1137
Target Start/End: Original strand, 6480663 - 6480770
Alignment:
Q  1030 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttg 1129  Q
    |||| |||| || |||| ||||| || ||||| ||||||| ||||||||||||||| |||| |||||||||||||||||  |||||||||| |||||||     
T  6480663 gacactggttaatgaatccaaaactaaaaaaaatatcttgaaaatataaactgttattttttactaactaattattacatcactttttaattaaatctta 6480762  T
Q  1130 cctctttt 1137  Q
    ||||||||    
T  6480763 cctctttt 6480770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 417 - 536
Target Start/End: Complemental strand, 44640533 - 44640415
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||| | |||||||||||| |||| |||| ||||||| |||||||  ||||||||||||||||||||||||  || | | |||||||| ||||    
T  44640533 gtgcgtttgatctactaaaaaatgaatgaca-gacagaacaacttcagttgtacagtgtttgatttgtaaaactgtttatggaaaatgacaaactagagg 44640435  T
Q  517 caagaaacatgacaaaaatt 536  Q
    ||||| ||| ||||||||||    
T  44640434 caagagacaagacaaaaatt 44640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 473 - 602
Target Start/End: Original strand, 45577619 - 45577752
Alignment:
Q  473 tgtttgatttgtaaaa-ctgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaat---tgatatttttgtccctcagcaaaccacatcaca 568  Q
    |||||||||||||||| |||||| | | ||| |||||||||||||||||| ||||||||||||    ||| ||| |||| ||||   |||||||| ||||    
T  45577619 tgtttgatttgtaaaagctgttttatggacatgacaaactggaggcaagagacatgacaaaaaaaaatgaaattcttgttcctcgctaaaccacaacaca 45577718  T
Q  569 actttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||||| || |||||||||||||||||    
T  45577719 actttttgtcccacgtgcaagttgtctaaaatac 45577752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 52674024 - 52673837
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacagg---acaaactgga 514  Q
    |||||||||| |||||||||| ||||||||||| || | |||||||||||| |||| | || ||| |||||||||||  || |  ||   ||||||||||    
T  52674024 tgcgtttgatctgctaaaaaacgaaggacatgataagataactccagttgtatagtatctggtttataaaactgtttttgggaagggatcacaaactgga 52673925  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||||  ||||||||||||  || ||||||||||||||  ||||| || ||||| |||||||| || |||  |||| ||||||||||    
T  52673924 gtcaagggacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatac 52673837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1062 - 1138
Target Start/End: Complemental strand, 41377289 - 41377213
Alignment:
Q  1062 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 1138  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||| || |||||||||    
T  41377289 ttatcttagaaatataaaccgttacttttgactaactaattattgcatcactttttaataaaattttacctctttta 41377213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 416 - 491
Target Start/End: Complemental strand, 13110518 - 13110443
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactg 491  Q
    |||| |||||||||||||||||||||| ||||||||| || || | |||||||| |||||||||||||||||||||    
T  13110518 ggtgtgtttgatttgctaaaaaatgaaagacatgacagaaaaatttcagttgtccagtgtttgatttgtaaaactg 13110443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 422 - 509
Target Start/End: Complemental strand, 43739644 - 43739557
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    ||||||||||||||||||||||||| ||| || |||||| |||||||  | |||||||||||||||||||||| ||| ||| ||||||    
T  43739644 tttgatttgctaaaaaatgaaggacgtgataagacaacttcagttgtaaaatgtttgatttgtaaaactgtttgagggacatgacaaa 43739557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1043 - 1125
Target Start/End: Complemental strand, 42810471 - 42810389
Alignment:
Q  1043 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 1125  Q
    |||||||||| |||||||||| |||| |||||||||||||||| ||||||| ||||||| ||||||  |||||| ||||||||    
T  42810471 gaattcaaaagtagaaaaattgtcttagaaatataaactgttatttttgacaaactaataattacatcacttttcaataaaat 42810389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 523 - 601
Target Start/End: Complemental strand, 43739566 - 43739488
Alignment:
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||||||| ||| ||| |||||||||| ||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  43739566 acatgacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaata 43739488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 2114248 - 2114195
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtc 469  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2114248 ggtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtc 2114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 504 - 598
Target Start/End: Complemental strand, 7001976 - 7001882
Alignment:
Q  504 gacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaa 598  Q
    |||||||| ||||||||| |||  |||||||   | |||||||||||||| ||||||||| ||||||||||||| | ||||| ||||||||||||    
T  7001976 gacaaactcgaggcaagagacagaacaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtctaaa 7001882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 473 - 602
Target Start/End: Complemental strand, 21098689 - 21098560
Alignment:
Q  473 tgtttgatttgtaaaactgtttcagg--tacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac 570  Q
    ||||| ||||||||||||||||||||  || ||||| ||||| |||| |||||   |||||||||||| ||| ||||| ||||  |||||||| || |||    
T  21098689 tgtttaatttgtaaaactgtttcagggatataggactaactgcaggctagaaag--gacaaaaattgaaattcttgtctctcactaaaccacaacataac 21098592  T
Q  571 tttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| || ||| || |||||||||||||    
T  21098591 tttttgtcgcacgtaaaatttgtctaaaatac 21098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1043 - 1108
Target Start/End: Complemental strand, 21416271 - 21416206
Alignment:
Q  1043 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 1108  Q
    |||| ||||| |||||||||| | |||||||||||||  |||||||||||||||||||||||||||    
T  21416271 gaatccaaaagtagaaaaattgtattggaaatataaaaggttacttttgactaactaattattaca 21416206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 528 - 600
Target Start/End: Complemental strand, 37932020 - 37931948
Alignment:
Q  528 acaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaat 600  Q
    ||||||| | |||||||||||||||| ||||||||| ||||||||||||||| |  |||||||||| ||||||    
T  37932020 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaat 37931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 473 - 553
Target Start/End: Complemental strand, 51518528 - 51518448
Alignment:
Q  473 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctca 553  Q
    ||||||||||||||||||||||| | |||||||||| ||||| |||| |||||||| |||||| || | ||||||| ||||    
T  51518528 tgtttgatttgtaaaactgtttctgatacaggacaagctggaagcaaaaaacatgataaaaatagagaattttgtctctca 51518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1032 - 1128
Target Start/End: Complemental strand, 30116864 - 30116768
Alignment:
Q  1032 cattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    ||||||| || ||||  |||| || ||||||| |||||||||||||||  |||| |||||| ||||||||||||| |  | ||||||||||||||||    
T  30116864 cattggttaatgaatctaaaagtaaaaaaattgtcttggaaatataaatcgttatttttgattaactaattattatatcattttttaataaaatctt 30116768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1057 - 1144
Target Start/End: Original strand, 14815384 - 14815471
Alignment:
Q  1057 aaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||| | |||||||||||| || ||| ||||||| |||||||||| |||  |  ||||||||||||||| | |||||||||||||    
T  14815384 aaaaattgtgttggaaatataaccttttatttttgaccaactaattatcacaccagcttttaataaaatcttacttcttttagctgct 14815471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1040 - 1125
Target Start/End: Complemental strand, 50095365 - 50095280
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 1125  Q
    |||||||| |||| || ||||||| | ||| ||||| ||||| |||||||| ||||||||||||||||   | |||||||||||||    
T  50095365 aaggaatttaaaagtaaaaaaattgttttgaaaatacaaactattacttttaactaactaattattacgatattttttaataaaat 50095280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 474 - 601
Target Start/End: Complemental strand, 10587189 - 10587062
Alignment:
Q  474 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttt 573  Q
    ||||||||||||||| || |||| | ||| |||||||   ||||| || ||| |||||||| ||| ||| |||||| |||  ||||||||||| || | |    
T  10587189 gtttgatttgtaaaattggttcaagaacatgacaaaccaaaggcatgagacaagacaaaaactgaaattattgtccttcattaaaccacatcataattat 10587090  T
Q  574 ttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||| ||| ||||| || ||||||    
T  10587089 ttgtcccacgtataagttatccaaaata 10587062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 543 - 602
Target Start/End: Complemental strand, 38520584 - 38520525
Alignment:
Q  543 tttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||| ||||||||| || || ||||||||||| | ||||||||| ||||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgtataaaatac 38520525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 559 - 602
Target Start/End: Complemental strand, 40792486 - 40792443
Alignment:
Q  559 ccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatac 40792443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1083 - 1137
Target Start/End: Complemental strand, 22280406 - 22280352
Alignment:
Q  1083 ttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 1137  Q
    ||||||||||| ||||||||||||||  || ||||||||||||||| | ||||||    
T  22280406 ttacttttgaccaactaattattacaccacattttaataaaatcttacttctttt 22280352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 416 - 457
Target Start/End: Complemental strand, 38520639 - 38520597
Alignment:
Q  416 ggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaaca 457  Q
    ||||||||||||||||||||| |||||||||||||||| ||||    
T  38520639 ggtgcgtttgatttgctaaaagaatgaaggacatgacagaaca 38520597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 667 - 729
Target Start/End: Original strand, 44649287 - 44649349
Alignment:
Q  667 tgtcatttattgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    |||||| | |||||||||||| |||| | |||||||||||| |||| || |||||||||||||    
T  44649287 tgtcatgtgttgttctcccttgtattgtactgttctttcttgtactgttctgtactgtacttg 44649349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 478 - 552
Target Start/End: Original strand, 47666984 - 47667058
Alignment:
Q  478 gatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctc 552  Q
    ||||||||||||||||||||| | || | |||||| |||||||| | |||| ||||||||| ||| |||| ||||    
T  47666984 gatttgtaaaactgtttcaggaatagaataaactgaaggcaagatatatgataaaaattgaaattgttgttcctc 47667058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 679 - 729
Target Start/End: Complemental strand, 52949670 - 52949620
Alignment:
Q  679 ttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    ||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  52949670 ttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 52949620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1048 - 1094
Target Start/End: Original strand, 53934089 - 53934135
Alignment:
Q  1048 caaaaatagaaaaattatcttggaaatataaactgttacttttgact 1094  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  53934089 caaaaattgaaaaattatcttgtaaatataaattgttaattttgact 53934135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 4e-75; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 415 - 602
Target Start/End: Original strand, 1351390 - 1351577
Alignment:
Q  415 aggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1351390 aggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 1351489  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| |||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  1351490 ggcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 1351577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 50304869 - 50304684
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50304869 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 50304770  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||| || ||  |||||||||||||||    
T  50304769 gcaagaaacaagacaaaaactgatatttttgtccctctgcaaaccacagcacaactttttgtctcacgtttaagttgtctaaaata 50304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 35387262 - 35387453
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35387262 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 35387361  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| |||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  35387362 tggaggtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaatac 35387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 844680 - 844866
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  844680 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagag 844779  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  844780 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 31004350 - 31004164
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31004350 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 31004251  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||| |  ||| |||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  31004250 gcacgggacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 31004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 412 - 601
Target Start/End: Complemental strand, 32270575 - 32270386
Alignment:
Q  412 taaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 511  Q
    ||||| || ||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  32270575 taaagatgtgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtagaggacaaact 32270476  T
Q  512 ggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32270475 ggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaata 32270386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 42512726 - 42512911
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42512726 ggtgcgtttgatttgctaaaaaataaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 42512825  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  42512826 gcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaata 42512911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 45490831 - 45491017
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||| |||| |||| ||||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  45490831 ggtgcgtttgatttgctaaaaaatgaaagacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggag 45490930  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  45490931 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 45491017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 51264713 - 51264527
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  51264713 ggtgcgtttgatttgctaaaaaatgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 51264614  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  51264613 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatac 51264527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 6711003 - 6711188
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  6711003 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagagg 6711102  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  6711103 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaatac 6711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 17888166 - 17887980
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  17888166 ggtgcatttgatttgctaaaaaatgaatgacatgacaaaacaactctagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggag 17888067  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17888066 gcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 17887980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 26118171 - 26118357
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26118171 ggtgcgtatgatttgctaaaaaatgaaggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 26118270  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| | |||||||||||||||| |||| |||| ||||||||||||||||| ||| ||||||||||||||||    
T  26118271 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttgtctaaaatac 26118357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 32289300 - 32289486
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  32289300 ggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggag 32289399  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  32289400 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtttaaaatac 32289486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 41973129 - 41972943
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||||||||||||||||||||||| || | |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  41973129 ggtgagtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggag 41973030  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| | |||||||||||||||| |||||||||  ||||||||||||| || ||||||||||||||||||||    
T  41973029 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaatac 41972943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 42510743 - 42510557
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  42510743 ggtgcgtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactggag 42510644  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||  ||| |||||||| | ||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  42510643 acaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 42510557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 16451344 - 16451159
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  16451344 gtgcgtttgatttgttaaaaaatgaaggacaggacataacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 16451245  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | ||||||||||| |||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  16451244 caagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 16451159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 17327606 - 17327791
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||     
T  17327606 gtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagt 17327705  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| |||| |||| |||||||||||||| ||||||||| || ||||||||||    
T  17327706 caagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctcatgtacaaattatctaaaatac 17327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 16387069 - 16386886
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||| |||||||||||||||||||||| ||||  || ||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16387069 tgcgtttgattt-ctaaaaaatgaaggacatgacagaacagttctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggc 16386971  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16386970 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 16386886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 41967805 - 41967991
Alignment:
Q  417 gtgcgtttgatttg-ctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||    
T  41967805 gtgcgtttgatttgactaaaaaatgaaggacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactagag 41967904  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||| |||||||| | |||||||||||||| | ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  41967905 gcaagagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 41967991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 45659039 - 45658853
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  45659039 ggtgcgtttgatttgctagaaaatgaaggacaggacaaaacaactccagttgtctagtgtctgatttgtaaaactgtttcaagtacaggacaaactggag 45658940  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     |||   ||| |||||||| ||||||||||||| |||| ||||||||| |||||||||||||||||  |||||||||| | ||||||    
T  45658939 acaaaggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaatac 45658853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 28340262 - 28340445
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||| ||||||| || | |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  28340262 tgcgtttgatttgctaaaaaat-aaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggc 28340360  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  28340361 aagggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 28340445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 30105630 - 30105822
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    |||| ||||| ||||||||||||||| ||||||||||| || | |||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30105630 ttaagggtgcttttgatttgctaaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtaaaggacaaa 30105729  T
Q  510 ctggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||  ||| |||||||| | |||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||||||    
T  30105730 ctggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaatac 30105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 417 - 600
Target Start/End: Complemental strand, 5109945 - 5109762
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||||  || |||| |||||||||||||||  |||||||||||||||||||||||||||||||| |||||| ||||||    
T  5109945 gtgcgtttgatttgctaaaaaatgaagtgcaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggagg 5109846  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaat 600  Q
    ||||  ||| |||||||| | || ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  5109845 caagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttgtctaaaat 5109762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 50540561 - 50540376
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||  |||||||  |||||||| ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  50540561 gtgcgtttgatttgctaaaaaagaaaggacagaacaaaacagctctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggagg 50540462  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||| ||| | |||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  50540461 caagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 50540376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 24339594 - 24339781
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||| ||||||  ||||||||||||||| |||||||||||||||| ||||||||||||    
T  24339594 ggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgttcagtgtttgatttgtataactgtttcaggtacatgacaaactggag 24339693  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagc-aaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  24339694 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagttgtctaaaatac 24339781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 11772588 - 11772774
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||    
T  11772588 ggtgcgtttgatttgctagaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaaggcaatctggag 11772687  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||  ||||| |||| | ||||||    
T  11772688 gcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaatac 11772774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 26764751 - 26764937
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||| || ||||| ||||||| || |||||||||    
T  26764751 ggtgcgtttgatttgctaaaaaataaaagacatgacagaacaactccagttgtccagtgtttgatttgtacaattgttttaggtacaagataaactggag 26764850  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| | |||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26764851 gcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 26764937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 39282111 - 39281926
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||| |||||||||||||||| | |||| |||||||  |||||||||||||||||||||||| |||||||||||||||| || |    
T  39282111 gtgcgtttgatttgctaaaacatgaaggacatgacaagataacttcagttgttcagtgtttgatttgtaaaactgtttaaggtacaggacaaactagatg 39282012  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  39282011 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaatac 39281926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 44737998 - 44738183
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||| |||||||||||||||| |||| |||| |||||||| | ||||| ||||||| |||||||||||||||||||||||| |||||  |||||    
T  44737998 ggtgcgtttgttttgctaaaaaatgaaagacaagacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacatgacaacttggag 44738097  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| ||| |||| | |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  44738098 gcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaata 44738183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 6029252 - 6029440
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaa-----aacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    ||||||||||||||| |||||||||||||||| ||||      |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  6029252 ggtgcgtttgatttgttaaaaaatgaaggacaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaac 6029351  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    || |||||||  ||| |||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  6029352 tgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 6029440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 7184141 - 7183950
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||||| |||||||||||||||||||  |||| |||| |||| || ||||  ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  7184141 ttaaagttgcgtttgatttgctaaaatttgaaagacaggacagaataactttagttgtccagtgtttgatatgtaaaactgtttcaggtacaggacaaac 7184042  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  ||| |||||||| | |||||||||||||| | ||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  7184041 tggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaatac 7183950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 422 - 601
Target Start/End: Complemental strand, 16437574 - 16437395
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||||||||||||||||||||||  | | |||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||| |||||||      
T  16437574 tttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccaatgtttgatttgtaaaactgtttcagctacaggacaaactagaggcaaag 16437475  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
     ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16437474 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 16437395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 15539846 - 15540029
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  15539846 ggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacagaacaaactggag 15539945  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||| ||| |||||||  ||| | |||||||  ||| ||||||||| ||||||||||||||  | ||| |||||||||||||    
T  15539946 gcaagagacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaa 15540029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 16476111 - 16476297
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||||||||||||||||||||| | || |  |||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||     
T  16476111 ggtgtgtttgatttgctaaaaaatgaaggagaggagaggacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagat 16476210  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| | |||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  16476211 gcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaatac 16476297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 49303310 - 49303496
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  49303310 ggtgcgtttgatttgctaaaaaataaagtacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtataagacaaactggag 49303409  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||  ||| || ||||| | |||||||||||| ||| ||||||||| ||||| ||||| ||| | ||||||||||||||||||||    
T  49303410 acaagggacaagagaaaaactcatatttttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtctaaaatac 49303496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 449 - 602
Target Start/End: Complemental strand, 12890423 - 12890270
Alignment:
Q  449 gacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtc 548  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||| | |||||||||||    
T  12890423 gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggataaactggaggcaagggacaggacaaaaactcatatttttgtc 12890324  T
Q  549 cctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  12890323 cctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaagatac 12890270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 1601387 - 1601205
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||  ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  1601387 gtgcgtttgatttgctaaaaa-tgaagaacatgacagaacaactttagttgttcagtgtttgatttgtaaaacggtttcaggtacaggacaaactggagg 1601289  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  | |  ||||||| |   |||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  1601288 caagggatagaacaaaaact--catttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 1601205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 449 - 602
Target Start/End: Original strand, 13994064 - 13994217
Alignment:
Q  449 gacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtc 548  Q
    |||| ||||||| |||||||| |||||||||||||||||||||||||| | ||| |||||| |||||||||| |||  |||||||| ||| |||||||||    
T  13994064 gacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtc 13994163  T
Q  549 cctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  13994164 cctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaatac 13994217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 421 - 599
Target Start/End: Original strand, 6143947 - 6144125
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||||||||| || ||||||||||||| |||| ||||||| |||||||| | ||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  6143947 gtttgatttgatacaaaatgaaggacaggacagaacaactgcagttgtccaatgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaag 6144046  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
      ||| |||||||| ||  ||||||||||||| |||||||||| ||||||||||| ||||| ||| |||||||||||||    
T  6144047 ggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtctaaaa 6144125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 417 - 601
Target Start/End: Complemental strand, 7837351 - 7837166
Alignment:
Q  417 gtgcgtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| |||||||||||||||| ||||||| |||| | ||||||| |||||||  |||||||||||||||||||||||||||| ||| |||||||| |||    
T  7837351 gtgcgcttgatttgctaaaaaaatgaaggatatgatagaacaacttcagttgttcagtgtttgatttgtaaaactgtttcaggaacatgacaaactagag 7837252  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||||||||||||||||  ||||||||| | | |||| ||||||||||||||||||| ||   |||||||||||||||||    
T  7837251 gcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactttttgtctcacagacaagttgtctaaaata 7837166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 435 - 602
Target Start/End: Complemental strand, 16704925 - 16704758
Alignment:
Q  435 aaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaa 534  Q
    ||||| ||||||| |||| ||||||| || ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||  ||| ||||||||    
T  16704925 aaaataaaggacaggacagaacaacttcaattgtccaatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaa 16704826  T
Q  535 ttgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
       |||||||||||||| | ||||||||||||||||| |||||| ||  |||||||||||||||||||    
T  16704825 catatatttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtctaaaatac 16704758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 51703119 - 51703305
Alignment:
Q  416 ggtgcgtttgatttg-ctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||| | ||||| |||||||||||||||||| ||||||| |||||||| |||||| |    
T  51703119 ggtgcgtttgatttgactaaaaaatgaaggacaagacagaacaactctaattgtccagtgtttgatttgtaaaattgtttcaagtacaggataaactgaa 51703218  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||  |||  ||||||| | |||||||||| ||||| | ||||||| |||||||||||||||||  |||| ||||||||||||||    
T  51703219 ggcaagggacagaacaaaaactcatatttttgttcctca-ccaaccacaacacaactttttgtcccacctacatgttgtctaaaatac 51703305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 417 - 548
Target Start/End: Complemental strand, 8839114 - 8838983
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| ||||| | ||||||||||||||||||||||| |||||| |||||||||||||    
T  8839114 gtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccaattgtccaatgtttgatttgtaaaactgtttctggtacaagacaaactggagg 8839015  T
Q  517 caagaaacatgacaaaaattgatatttttgtc 548  Q
     ||   |||||||||||| |||||||||||||    
T  8839014 aaatggacatgacaaaaactgatatttttgtc 8838983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 46155125 - 46154932
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| | ||||  |||||||||||||||||| | |||||||||| |||||||||||||    
T  46155125 ggtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactctaattgttcagtgtttgatttgtaaaattatttcaggtactggacaaactggag 46155026  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctca-------gcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||  ||| |||||||| | ||||||||||||||||        ||||| ||| |||||||||||||||||  |||||||||||||||||||    
T  46155025 gtgagggacaggacaaaaactcatatttttgtccctcaccaaactacaaactacagcacaactttttgtcccacttacaagttgtctaaaatac 46154932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 437 - 599
Target Start/End: Original strand, 38086973 - 38087135
Alignment:
Q  437 aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaatt 536  Q
    ||||||||| | |||||||||||| ||||||||  ||||||||||| |||||| |||||| |||||||| ||| |||| ||||   |||||||||||| |    
T  38086973 aatgaaggataggacaaaacaacttcagttgtcctgtgtttgatttataaaacagtttcaagtacaggataaaatggatgcaatggacatgacaaaaact 38087072  T
Q  537 gatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
     |||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||    
T  38087073 catatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtctaaaa 38087135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 416 - 600
Target Start/End: Original strand, 42705193 - 42705378
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||| ||||||| ||| | ||| || ||||||||   ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  42705193 ggtgcgtttgatttgcgaaaaaataaagaatatgtcataacaactctgattgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 42705292  T
Q  516 gcaagaaacatg-acaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaat 600  Q
     ||||  ||  | | ||||| | |||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  42705293 acaagggacgggaaaaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctgaaat 42705378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 10384580 - 10384402
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||| || |||    ||||||| |||||||||||||||||||||||||| | |||||||||||| ||||| ||||     
T  10384580 ggtgcgtttgatttgctaaaaaatgaagaac-tga----acaactctagttgtctagtgtttgatttgtaaaattatttcaggtacagtacaaattggat 10384486  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||   ||| |||||||| | |||||||||||| |||  |||||||| ||||||||||||||||| |||||| || |||||||    
T  10384485 gcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactttttgtcccacgtacaaattatctaaaa 10384402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 421 - 602
Target Start/End: Original strand, 3414814 - 3414995
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||||||||| ||||| |||||||| ||||||||||||||| | || || |||||||||||||||||||| ||| |||||| |||||| |||||| | ||    
T  3414814 gtttgatttgttaaaatatgaaggatatgacaaaacaactctaattatccagtgtttgatttgtaaaactattttaggtactggacaatctggagacgag 3414913  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||| | |||||||||||||||| ||||| |||||| || ||||| ||||| |||| |||||| ||||||||    
T  3414914 ggacaggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaatac 3414995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 414 - 599
Target Start/End: Original strand, 50382354 - 50382542
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||| | |||||||| || ||||||||||| |  |||||||||||| |  ||| ||||||||||||| ||||||||||||||| |||  |||||||||    
T  50382354 aaggtgtggttgatttgttataaaatgaaggagaatacaaaacaactctacatgtttagtgtttgatttttaaaactgtttcagggacataacaaactgg 50382453  T
Q  514 agg---caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||   |||   ||| |||||||| ||| |||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  50382454 aggaggcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 50382542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 21071832 - 21071728
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||| || ||||| |||||||||||||||||| ||||||||||||| ||||||||||||    
T  21071832 ggtgcgtttgatttgctaaagaatgaagtacatgacagaacaacttcaattgtccagtgtttgatttgtaaaattgtttcaggtacatgacaaactggag 21071733  T
Q  516 gcaag 520  Q
    |||||    
T  21071732 gcaag 21071728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 418 - 513
Target Start/End: Complemental strand, 38663323 - 38663228
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||||    
T  38663323 tgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacaggataaactgg 38663228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 417 - 578
Target Start/End: Complemental strand, 7837592 - 7837430
Alignment:
Q  417 gtgcgtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| || ||||||||||||| ||||||| |||| | || |||| |||||||  |||||||||||| ||||||||||||||| ||| |||||||| |||    
T  7837592 gtgcgcttaatttgctaaaaaaatgaaggatatgatagaataacttcagttgttcagtgtttgatttataaaactgtttcaggaacatgacaaactagag 7837493  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtc 578  Q
    ||| |  ||||||||||||||||  ||||||||| | | |||| |||||||||||||||||||    
T  7837492 gcaggggacatgacaaaaattgaattttttgtccattatcaaatcacatcacaactttttgtc 7837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1003 - 1144
Target Start/End: Complemental strand, 5178881 - 5178741
Alignment:
Q  1003 agggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatt 1102  Q
    |||||||||||||| | || ||| || |||| | || ||||||| ||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  5178881 agggtcttgttaaccaatgcctccgg-gacactcgttaaggaatccaaaagtagaaaaattgtcttggaaacataaactgttactttttactaactaatt 5178783  T
Q  1103 attacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||  ||||||||||||||| || ||| |||||||||||    
T  5178782 attacaccactttttaataaaattttacctattttagctgct 5178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Complemental strand, 11803018 - 11802914
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||   ||||||||    
T  11803018 aaggaatccaaaagtagaaaaattgttttggaaatataaactgttacttttgactaactaattattacattactttttaataaattctttagtcttttag 11802919  T
Q  1140 ctgct 1144  Q
    |||||    
T  11802918 ctgct 11802914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 417 - 601
Target Start/End: Complemental strand, 39793023 - 39792840
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||| || ||||||||| |  ||||||   |||||  ||||||||||||| |||||||||| ||| ||| || ||| |||||     
T  39793023 gtgcgtttgatttgctaaaaa-tggaggacatgaaatgacaacttaggttgtacagtgtttgatttgcaaaactgttttagggacaagataaattggaga 39792925  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||| | | |||||||||||||| ||| |||||| ||| ||||||||| |||||||| ||||  || |||||| ||||||||||||    
T  39792924 caaaagatatgacaaaaattgaaattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaaata 39792840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1049 - 1136
Target Start/End: Complemental strand, 48502667 - 48502580
Alignment:
Q  1049 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttt 1136  Q
    |||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  48502667 aaaagtagaaaaattgtcttgaaaatataagctgttacttttgactaactaattattacacaactttttaataaaattttacctcttt 48502580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 26733773 - 26733587
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||||| |||||||||||||||| ||| ||||  |||||| |||||||    ||||||||||||||||||||||   | || ||||||||| |||    
T  26733773 ggtgcatttgacttgctaaaaaatgaagaacaagacatgacaacttcagttgtacgatgtttgatttgtaaaactgtttttaggaccggacaaactagag 26733674  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     | |   |||||||||||| ||| ||| ||||||| ||  |||||| | |||||||||||| | |||||||||||||||||||||||    
T  26733673 acgatggacatgacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaatac 26733587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 416 - 494
Target Start/End: Original strand, 40811327 - 40811405
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgttt 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||||||||| |||||||||||    
T  40811327 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttgtccagcgtttgatttataaaactgttt 40811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 539 - 601
Target Start/End: Complemental strand, 38663227 - 38663165
Alignment:
Q  539 tatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38663227 tatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 38663165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 25539962 - 25539887
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||  |||||||||| | ||||||    
T  25539962 gacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaatac 25539887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1006 - 1144
Target Start/End: Complemental strand, 52112492 - 52112357
Alignment:
Q  1006 gtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattatt 1105  Q
    |||||||||||||||| | ||||  ||  |||| ||||||| || |  |||||||||| |||| |||| |||||| ||||||||| ||||||||| ||||    
T  52112492 gtcttgttaactagtgccccggggtac--tggttaaggaatccataggtagaaaaattgtctttgaaacataaacggttactttt-actaactaactatt 52112396  T
Q  1106 acagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    |||  ||||||||||||||||||  ||||||||||||||    
T  52112395 acaccactttttaataaaatcttttctcttttagctgct 52112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 479 - 549
Target Start/End: Original strand, 20494927 - 20494997
Alignment:
Q  479 atttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtcc 549  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||| |||||||| | ||||||||||||    
T  20494927 atttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcc 20494997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1032 - 1144
Target Start/End: Complemental strand, 13643692 - 13643581
Alignment:
Q  1032 cattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcc 1131  Q
    ||||||| |||||||||| || || ||||||| ||||| |||||||||| |||||||||||| || |||||||||||  || |||||||||||| ||       
T  13643692 cattggttaaggaattcataagtaaaaaaattgtcttgaaaatataaaccgttacttttgacaaattaattattacaccac-ttttaataaaattttatt 13643594  T
Q  1132 tcttttagctgct 1144  Q
    |||||||||||||    
T  13643593 tcttttagctgct 13643581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 23799531 - 23799603
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtt 493  Q
    ||||||||||||||||| |||| ||||||||| ||||| | ||||||| ||||||||||||| ||||||||||    
T  23799531 gtttgatttgctaaaaattgaatgacatgacacaacaatttcagttgtttagtgtttgatttataaaactgtt 23799603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 414 - 601
Target Start/End: Complemental strand, 17291798 - 17291612
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||| ||||||| |||||||||||  || ||||||||  ||||||||||||||   || ||||||||||||||||||||   | |||||| ||  ||     
T  17291798 aaggtgtgtttgatctgctaaaaaattgagaacatgacaggacaactccagttgtacggtatttgatttgtaaaactgtttttaggacaggataagttga 17291699  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    || ||||| ||| ||||||||   | ||||||||||| ||  |||||||| || |||||||||||||  ||||||||| | |||||||    
T  17291698 agtcaagagacaggacaaaaacataaatttttgtccc-cactaaaccacaacaaaactttttgtccctcgtacaagttatataaaata 17291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 457 - 602
Target Start/End: Original strand, 504388 - 504533
Alignment:
Q  457 aactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagca 556  Q
    |||| |||||||  || |||||||||| |||| ||||| ||| ||| |||||||| ||||||||  |||  ||||||| ||| | ||||||| ||||  |    
T  504388 aacttcagttgtacagcgtttgatttgcaaaattgttttagggacaagacaaacttgaggcaagggacaacacaaaaactgaaaattttgtctctcacta 504487  T
Q  557 aaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| | ||||| |||||||||||  || ||||||||||||||||    
T  504488 aaccataacacaattttttgtcccacatagaagttgtctaaaatac 504533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 31574566 - 31574386
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||| |||||| |||||||| ||||||||  |||||| |||||||  | | |||||||||||||||| |||||   |||  |||||||||||  |||    
T  31574566 gtttgatctgctaagaaatgaagcacatgacatgacaacttcagttgtacaat-tttgatttgtaaaactatttcaaaaacaaaacaaactggagataag 31574468  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||||| | | |||| | || ||||  ||  |||| | |||||| |||||| || |||||||||| ||||||||    
T  31574467 aaacatgacaaaaactaaaatttgtatctctcactaattcacaacgcaacttattgtcctatatacaagttgtttaaaatac 31574386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 411 - 516
Target Start/End: Original strand, 47242467 - 47242572
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||| |||| |||||||||||||| || |||||||||  |||||| ||||||| | |||||| |||||||||| |||||  || ||| |||||||    
T  47242467 ttaagggtgtgtttcatttgctaaaaaataaatgacatgacatgacaacttcagttgtatggtgtttaatttgtaaaattgtttatgggacatgacaaac 47242566  T
Q  511 tggagg 516  Q
    ||||||    
T  47242567 tggagg 47242572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 474 - 601
Target Start/End: Complemental strand, 570549 - 570419
Alignment:
Q  474 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggc-aagaaacatgacaaaaattgatatttttgtccctcagcaaaccaca--tcacaac 570  Q
    ||||||||| ||||| ||||||||  ||| || ||||||||||| |||  |||||| |||||  || |||||||||||||| |||||||||   ||||||    
T  570549 gtttgatttataaaattgtttcagcgacaagataaactggaggcaaagggacatgataaaaacagaaatttttgtccctcaccaaaccacaatgcacaac 570450  T
Q  571 tttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||| |  ||| |||||||||||||||    
T  570449 tttttgtctcgcgtataagttgtctaaaata 570419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 23799603 - 23799652
Alignment:
Q  526 tgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttttt 575  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  23799603 tgacaaaaactgatatttttgtccctcaccaaaccacagcacaacttttt 23799652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1070 - 1127
Target Start/End: Original strand, 25161449 - 25161506
Alignment:
Q  1070 gaaatataaactgttacttttgactaactaattattacagaactttttaataaaatct 1127  Q
    ||||||||||||||||  ||| |||||||||||||||||  |||||||||||||||||    
T  25161449 gaaatataaactgttatattttactaactaattattacaccactttttaataaaatct 25161506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 25540036 - 25539983
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtc 469  Q
    |||||||||||||||||| ||||||||||| | |||| ||||||||||||||||    
T  25540036 ggtgcgtttgatttgctagaaaatgaaggataggacagaacaactccagttgtc 25539983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 418 - 535
Target Start/End: Complemental strand, 33316615 - 33316498
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||| ||||||||||||||||||   ||| | |||||| |||| |  ||| |||||| |||||| |||||||||| |||  |||||||||| ||    
T  33316615 tgcgtttgatctgctaaaaaatgaaggacgatacatagcaactctagttctacagtatttgatctgtaaatctgtttcagggacaaaacaaactggacgc 33316516  T
Q  518 aagaaacatgacaaaaat 535  Q
    |||| |||  ||||||||    
T  33316515 aagagacaaaacaaaaat 33316498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 444 - 553
Target Start/End: Complemental strand, 35335890 - 35335781
Alignment:
Q  444 gacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatattt 543  Q
    ||||||||||||||| | || | || ||||||||||||||||||||||||  ||  |||  ||||| ||||| ||||| ||||||||||||  ||||||     
T  35335890 gacatgacaaaacaatttcaatagtatagtgtttgatttgtaaaactgttgtagagacataacaaaatggagacaagagacatgacaaaaaccgatattc 35335791  T
Q  544 ttgtccctca 553  Q
    ||||| ||||    
T  35335790 ttgtctctca 35335781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1067 - 1144
Target Start/End: Complemental strand, 50295322 - 50295245
Alignment:
Q  1067 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||||||||||||||| |||| || ||||||||||||||  | |||||| ||||||||  | |||||||||||||    
T  50295322 ttggaaatataaactgttatttttaaccaactaattattacaacattttttactaaaatctcacttcttttagctgct 50295245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1041 - 1137
Target Start/End: Original strand, 2356382 - 2356477
Alignment:
Q  1041 aggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 1137  Q
    |||||| ||||| || ||||||| ||||  ||||||||| ||||| ||||||| ||||||| |||||| ||||||| ||||||||||| | ||||||    
T  2356382 aggaatccaaaagtaaaaaaattgtcttaaaaatataaattgttatttttgaccaactaat-attacacaacttttaaataaaatcttacttctttt 2356477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 32215227 - 32215362
Alignment:
Q  464 gttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccaca 563  Q
    ||||| |||||||||| |||||||| ||||  | | ||| || |||| ||||||||||||||| ||||||||||| ||| |||||  | |  ||||| ||    
T  32215227 gttgtatagtgtttgacttgtaaaattgttctaaggacaagataaacgggaggcaagaaacatcacaaaaattgaaattcttgtcatttactaaaccgca 32215326  T
Q  564 tcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
     || || ||||||||| | |||||||||| ||||||    
T  32215327 acataattttttgtcctaagtacaagttgactaaaa 32215362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 416 - 494
Target Start/End: Complemental strand, 7146978 - 7146900
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgttt 494  Q
    |||| |||||||  |||||||| | ||||| | |||| ||||||| ||||||| ||||||||||||||||||| |||||    
T  7146978 ggtgtgtttgatcagctaaaaattaaaggataagacataacaacttcagttgtatagtgtttgatttgtaaaattgttt 7146900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 16643188 - 16643238
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagtt 466  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||| |||||    
T  16643188 ggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactgcagtt 16643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 473 - 602
Target Start/End: Complemental strand, 40610883 - 40610754
Alignment:
Q  473 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaa-acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaact 571  Q
    ||||||||||||||||||||| | |   ||||||||| || |||||| || | ||||||||||   | ||| || ||||||| ||||||||| |||||||    
T  40610883 tgtttgatttgtaaaactgttccggcggcaggacaaattgaaggcaaaaagatatgacaaaaacaaa-attcttctccctcatcaaaccacaacacaact 40610785  T
Q  572 ttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| || ||| || ||||||||||||||||    
T  40610784 ttttatcacatatataagttgtctaaaatac 40610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 677 - 731
Target Start/End: Original strand, 42512987 - 42513041
Alignment:
Q  677 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttgtt 731  Q
    ||||||||||| |||| |||||||||||||| |||| || |||||||||||||||    
T  42512987 tgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgtt 42513041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 472 - 601
Target Start/End: Complemental strand, 6771530 - 6771401
Alignment:
Q  472 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaact 571  Q
    ||||||||||| ||||||||||| ||| ||| || ||| | ||| ||||  ||| |||||||| | | ||| ||||| ||||  ||| |||| |||||||    
T  6771530 gtgtttgatttataaaactgttttagggacatgataaattagagacaagggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaact 6771431  T
Q  572 ttttgtcccatgtacaagttgtctaaaata 601  Q
    |||| |||||  ||||||||| ||||||||    
T  6771430 ttttctcccacatacaagttgactaaaata 6771401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 676 - 729
Target Start/End: Complemental strand, 38663090 - 38663037
Alignment:
Q  676 ttgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    ||||||||||||||||| || ||||||||||| |||| || |||||||||||||    
T  38663090 ttgttctcccttatattgtgttgttctttcttgtactgttttgtactgtacttg 38663037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 677 - 729
Target Start/End: Complemental strand, 50304608 - 50304556
Alignment:
Q  677 tgttctcccttatattttgctgttctttcttatactattatgtactgtacttg 729  Q
    ||||||||||| |||| |||||||||||||| |||| || |||||||||||||    
T  50304608 tgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg 50304556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1051 - 1124
Target Start/End: Original strand, 13969113 - 13969186
Alignment:
Q  1051 aaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||||  || ||||| ||||||||| |||||||||| | ||| ||||||||||| || ||||| ||||||    
T  13969113 aaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaa 13969186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1067 - 1124
Target Start/End: Original strand, 15419681 - 15419738
Alignment:
Q  1067 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||||||||||||||||||| | ||| |||| |||| |  ||||||||||||||    
T  15419681 ttggaaatataaactgttactttttattaagtaataattatattactttttaataaaa 15419738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1063 - 1124
Target Start/End: Original strand, 44109097 - 44109158
Alignment:
Q  1063 tatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||||||||||||||||||||  ||||| | ||| |||| ||||||  ||||||||||||||    
T  44109097 tatcttggaaatataaactgtccctttttattaagtaataattacattactttttaataaaa 44109158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 3e-73; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 417 - 601
Target Start/End: Complemental strand, 10467272 - 10467088
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  10467272 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggagg 10467173  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||| ||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10467172 caagagacaagacaaaaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 10467088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 411 - 601
Target Start/End: Original strand, 7591338 - 7591528
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7591338 ttaagggtgcgtttgttttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 7591437  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||||||| ||| |||||||| |||||||||||| ||||||||||||||| |||||||||||||| || ||| |||||||||||||||    
T  7591438 tggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaata 7591528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 34063336 - 34063151
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  34063336 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaactggagg 34063237  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  34063236 caagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 34063151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 8672953 - 8673137
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8672953 tgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggc 8673052  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8673053 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 8673137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 4052689 - 4052503
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  4052689 ggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggag 4052590  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4052589 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 4052503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 420 - 601
Target Start/End: Complemental strand, 22999463 - 22999281
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22999463 cgtttgatttgctaaaaaatgaaggacatgacagaacaactccggttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 22999364  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac-tttttgtcccatgtacaagttgtctaaaata 601  Q
    || ||| |||||||| |||||||||||||||||||||||||| | || ||| ||||||||||| |||||| ||||||||||||    
T  22999363 gagacaggacaaaaactgatatttttgtccctcagcaaaccatagcaaaacttttttgtcccacgtacaacttgtctaaaata 22999281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 39643092 - 39642906
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  39643092 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaactggag 39642993  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| |||||||||||||||||| ||||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  39642992 gcaagggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaatac 39642906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 41548827 - 41548642
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  41548827 ggtgcgtttaatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactggag 41548728  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||| ||| |||||||| |||||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  41548727 gcaagagacaggacaaaaactgatatttttgtacctcagcagaccacaacacaactttttgtcccacgtacaagttgtctaaaata 41548642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 37664173 - 37664365
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    |||| ||||||||||||||||||||| ||||||||||| |||| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  37664173 ttaagggtgcgtttgatttgctaaaaaaatgaaggacaggacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaa 37664272  T
Q  510 ctggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    || ||||||||  ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37664273 ctagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 37664365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 30542918 - 30543104
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  30542918 ggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 30543017  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| | |||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  30543018 gcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctaaaatac 30543104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 41709986 - 41709800
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41709986 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 41709887  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||| | ||||||||| ||||||||||    
T  41709886 gcaaatgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagttatctaaaatac 41709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 27104168 - 27103983
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  27104168 ggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcaatgtttgatttgtaaaactgtttcaggtacaggacaaactggag 27104069  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  |||||||||||| | |||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||    
T  27104068 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 27103983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 7394710 - 7394896
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||  |||||||||||||||||| |||||||| |||    
T  7394710 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttacaaaactgtttcaggtacatgacaaactagag 7394809  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| | |||||||||||||||| ||||||| | |||||||||||||| || ||||||||||||||||||||    
T  7394810 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtctaaaatac 7394896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 30501354 - 30501168
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  30501354 ggtgcgtttgatttgctaaaaaatgaaggacatggcagaacaacttcagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggag 30501255  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| ||||||||   |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  30501254 gcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatac 30501168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 31513479 - 31513665
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||||| ||||||||||| | ||||||||||||    
T  31513479 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactggag 31513578  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  31513579 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttgtctaaaatac 31513665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 34101717 - 34101531
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34101717 ggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 34101618  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||  ||||||| | |||||||||||||||| ||||||||| || |||||||| | ||| ||||||||||||||||||||    
T  34101617 gcaagggacaacacaaaaactcatatttttgtccctcaccaaaccacaacataacttttttttccacgtacaagttgtctaaaatac 34101531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 37618288 - 37618474
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  37618288 ggtgcgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaattggag 37618387  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||| | ||||||    
T  37618388 gcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgttttaaatac 37618474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 45446664 - 45446478
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  45446664 ggtgcgtttgatttgctaaaaaatgaaggataagacaaaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacacgacaaactggag 45446565  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| || ||||| | |||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  45446564 gcaagggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 45446478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 416 - 563
Target Start/End: Complemental strand, 37474909 - 37474762
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37474909 ggtgcgtttgatttgctaaaaaatgaaggatatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 37474810  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccaca 563  Q
    |||||| ||| |||||||| | ||||||||||||||||||||||||||    
T  37474809 gcaagagacaggacaaaaacttatatttttgtccctcagcaaaccaca 37474762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 3251552 - 3251738
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||| | |||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  3251552 ggtgcgtttgatttgctaaaaaataaaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactggag 3251651  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||  ||||||| | |||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  3251652 gcaagcgacagaacaaaaacttatatttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtctaaaatac 3251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 420 - 602
Target Start/End: Complemental strand, 15001671 - 15001489
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||||| |||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15001671 cgtttgatttgataaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaa 15001572  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     | |||  ||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  15001571 tagacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaatac 15001489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 25478452 - 25478266
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  25478452 ggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggag 25478353  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||  ||| || ||||| | |||||||||||||||| |||| |||| ||||||||||||||| | ||||||||||||||||||||    
T  25478352 acaagggacaggaaaaaaactcatatttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaatac 25478266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 421 - 602
Target Start/End: Original strand, 12753226 - 12753407
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  12753226 gtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaactgaaggcaaa 12753325  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||| | |||||||||| ||||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  12753326 tgacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 12753407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 421 - 593
Target Start/End: Complemental strand, 40389244 - 40389072
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  40389244 gtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaa 40389145  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgt 593  Q
      ||| |||||||| |||||||||| || |||| ||||||||| |||||||||||||||||  ||||||||||    
T  40389144 ggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttgt 40389072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 29672218 - 29672405
Alignment:
Q  416 ggtgcgtttgatttgcta-aaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    |||||||||||||||||  |||||||||||||| |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||    
T  29672218 ggtgcgtttgatttgctttaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactaga 29672317  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  29672318 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaatac 29672405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 417 - 599
Target Start/End: Original strand, 29610952 - 29611134
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||| |||| ||||||||||||    
T  29610952 gtgcgtttgatttgttaaaaaatgaaggacatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggagg 29611051  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||  ||| |||||||| ||| |||||||||||||  ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  29611052 caagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaa 29611134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 35225871 - 35225685
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||| | |||| |||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||    
T  35225871 ggtgcgtttgatttgataaaaaatgaaggataggacagaacaactccagttgtccagtgtttggtttgtaaaacagtttcagggacaggacaaactggag 35225772  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| ||  |||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||    
T  35225771 gcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgtctaaaatac 35225685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 419 - 602
Target Start/End: Original strand, 14004943 - 14005126
Alignment:
Q  419 gcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 518  Q
    ||||||||||||||||||||||||||| | |||| ||||| |  ||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  14004943 gcgtttgatttgctaaaaaatgaaggataggacataacaattttagttgtccagtatttgatttgtaaaactgtttgaggtacaggacaaactggaggca 14005042  T
Q  519 agaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||  ||| |||||||| | |||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14005043 agggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 14005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 32019892 - 32020083
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||||||||||| ||||||||| |||| |||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32019892 ttaagggtgcgtttgatttgctaaaaattgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaac 32019991  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| |||||    | |||||||| | |||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  32019992 tggaagcaaggggtaggacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaatac 32020083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 5968760 - 5968946
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||    
T  5968760 ggtgcgtttaatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagag 5968859  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||| ||| ||||||||| ||||||||||| ||||| |||||| |||||||||||||    
T  5968860 gcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaatac 5968946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 6386785 - 6386599
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||  ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  6386785 ggtgcgtttgatttgctaaaaaatgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgtttcaggtataggacaaactggag 6386686  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | || | | | |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  6386685 gtaaaagataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 6386599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 419 - 602
Target Start/End: Original strand, 13406834 - 13407017
Alignment:
Q  419 gcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 518  Q
    ||||||||||||||||||||||||||| | | || |||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  13406834 gcgtttgatttgctaaaaaatgaaggatagggcagaacaactctagttgtctagtgtttaatttgtaaaactgtttcaggtatatgacaaactggaggca 13406933  T
Q  519 agaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    || ||||  ||||||| | |||||||||||||||| ||||||||| || || |||||||| || ||||||||||||||||||||    
T  13406934 aggaacagaacaaaaactcatatttttgtccctcaccaaaccacagcataattttttgtctcacgtacaagttgtctaaaatac 13407017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 37862067 - 37861882
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||  ||| | |||||| ||||||  | ||||||||| |||||||||||||||||||||||||||||||||    
T  37862067 ggtgcgtttgatttgctaaaaaatgaaggacagaacata-caactctagttgttcaatgtttgattagtaaaactgtttcaggtacaggacaaactggag 37861969  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||| ||||||| |||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  37861968 gcaagtgacaggacaaaaactcatatttttatccctcaccaaaccacatcataactatttgtcctacgtacaagttgtctaaaatac 37861882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 454 - 602
Target Start/End: Original strand, 29563160 - 29563308
Alignment:
Q  454 aacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctca 553  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||| | ||||||||||||||||    
T  29563160 aacaactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctca 29563259  T
Q  554 gcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  29563260 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 29563308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 17520803 - 17520619
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||| |||| || || ||| |||||    
T  17520803 ggtgtgtttaatttgctaaaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaagtgttttaggtgcatgataaaatggag 17520704  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| | |||||| | ||| |||||||||||| ||||||||| |||||||||||||||||  ||||||||||| ||||||    
T  17520703 gcaagggacagggcaaaaacttata-ttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtccaaaata 17520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 17805899 - 17805714
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||| ||||| | ||||||||||||||| ||| | |||||| | ||||  |||||||||||||||||||||||||| |||||||||||||| ||||    
T  17805899 gtgcgtttaatttgtttaaaaatgaaggacataacagaccaactctaattgttcagtgtttgatttgtaaaactgtttcaagtacaggacaaactagagg 17805800  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||| ||||| ||||||| | ||||||| |||||| || ||||||||||||||||||||    
T  17805799 caagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaatac 17805714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 45114263 - 45114078
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||| |||||||||| ||||  |||||| || ||||  ||||||||||||||||||||||||||||||||| ||||||  || |    
T  45114263 gtgcgtttgatttgctaaaacatgaaggacaggacatgacaacttcaattgttcagtgtttgatttgtaaaactgtttcaggtacagaacaaacgagatg 45114164  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  | | |||||||| | |||||||||||||||| |||||||||  |||||||||||||  | ||||||||||||||||||||    
T  45114163 caagggagaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcataggtacaagttgtctaaaatac 45114078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 16485705 - 16485891
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||| |||||||||||||| | ||||| | |||||||| ||||||||||||||||||  |||||||| ||| |||||| || ||    
T  16485705 ggtgcgtttgatttgataaagaatgaaggacatgatagaacaatttcagttgtccagtgtttgatttgtaaaatagtttcagggacatgacaaattgaag 16485804  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   |||  ||||||| ||  |||||||||||||  ||||||||| ||||||||||||||| | ||| ||||| ||||||||||    
T  16485805 gcaaaggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtataagttttctaaaatac 16485891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 31732257 - 31732087
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||||||| |||| |||||||  ||||||| |||||||||||||||||||              |||||||| |||||    
T  31732257 tgcgtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaac--------------gacaaacttgaggc 31732172  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  |||||||||||| | |||||||||||||||| |||||||||  ||||||||||||| ||  |||||||||||||||||||    
T  31732171 aagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaatac 31732087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1055 - 1144
Target Start/End: Complemental strand, 38388618 - 38388529
Alignment:
Q  1055 agaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  38388618 agaaaaattatcttggaaatataaactattacttttgactaactaattattacatcactttttaataaaatcttacctcttttagctgct 38388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 421 - 601
Target Start/End: Original strand, 10656587 - 10656767
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||||| || ||||||  || ||||| ||| ||||||||||||| || ||| ||  ||| |||||||| |||||||     
T  10656587 gtttgatttgctaaaaaatgaaggacatgtcagaacaacctcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaactagaggcaaa 10656686  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    | ||| |||||||| |||  ||||||||| |||  |||||||| |||||||||||||| || |||||| ||||||||||||    
T  10656687 agacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtctaaaata 10656767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1040 - 1138
Target Start/End: Complemental strand, 1988890 - 1988792
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 1138  Q
    ||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||    
T  1988890 aaggaatccaaaagtagaaaaattgtcttcgaaatataaactgttacttttgactaactaattattacattactttttaataaattcttacctctttta 1988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 1048 - 1144
Target Start/End: Original strand, 24757059 - 24757155
Alignment:
Q  1048 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||    
T  24757059 caaaagtagaaaaattgacttgaaaatataaactgttacttttgactaactaattattacatcactttttaataaaatcttatctcttttagctgct 24757155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 10932940 - 10932759
Alignment:
Q  421 gtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    ||||||||| |||||||| | ||||||| ||| |||||||| ||||||| | ||||||||||| ||||| |||||  || ||| |||||| | |||||||    
T  10932940 gtttgatttactaaaaaaataaaggacaagaccaaacaacttcagttgtatggtgtttgatttataaaattgtttatgggacaagacaaagtagaggcaa 10932841  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    || |||||| ||||| | | | ||||||||||||  ||||||||||||||||||| || ||| |||||| |||||||||||||    
T  10932840 gagacatgataaaaact-aaaattttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaatac 10932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 21272876 - 21272707
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||| |||||| |||| || | |||||||  ||||||| ||||||||||||||||||||||||||| |||||                
T  21272876 ggtgcgtttgatttgctaaagaatgaatgacacgagagaacaactttagttgtccagtgtttgatttgtaaaactgtttcagatacagcg---------- 21272787  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
           ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  21272786 -------acaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 21272707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 22756312 - 22756493
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||| |||||||||||||||||||     |||||||||||||| |  | ||||||||||||||||||||||| || | |||||||| | |||    
T  22756312 ggtgtgtttgatctgctaaaaaatgaaggaca-----aaacaactccagttatacaatgtttgatttgtaaaactgtttctgggataggacaaatttgag 22756406  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||| ||||||||   | |||||| |||||||  | |||||| |||||||||||||  || ||||||||| ||||||||||    
T  22756407 gcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatac 22756493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 416 - 509
Target Start/End: Original strand, 32303504 - 32303597
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    ||||||||||||||||||||||| |||||| |||| | |||||||  ||||||  |||||||||||||||||||||||||||||||||||||||    
T  32303504 ggtgcgtttgatttgctaaaaaacgaaggaaatgatagaacaactttagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaa 32303597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 433 - 602
Target Start/End: Original strand, 16595063 - 16595231
Alignment:
Q  433 aaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaa 532  Q
    ||||||||||||||||||||  ||||| |||||||| || |||||||||||| ||| |||||| || |||| |||||||| |||||||  ||| ||||||    
T  16595063 aaaaaatgaaggacatgacaggacaacaccagttgtatattgtttgatttgt-aaattgtttctgggacagaacaaactgtaggcaagggacaggacaaa 16595161  T
Q  533 aa-ttgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||  ||| | |||||||||||   || ||||| ||||||||||||||||| ||||||||| ||||||||||    
T  16595162 aacatga-agttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagttatctaaaatac 16595231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 416 - 490
Target Start/End: Complemental strand, 38047555 - 38047481
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaact 490  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||    
T  38047555 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaact 38047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 32303592 - 32303667
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  32303592 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 32303667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 1049 - 1123
Target Start/End: Complemental strand, 34832376 - 34832302
Alignment:
Q  1049 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaa 1123  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  34832376 aaaagtagaaaaattattttggaaatataaattgttacttttgactaactaattattacaccactttttaataaa 34832302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1040 - 1137
Target Start/End: Complemental strand, 1551605 - 1551508
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 1137  Q
    ||||||| ||||| |||||||||| ||||  ||||||||| ||||||||||||| |||||||||| |||  |||||||||||||||||| ||||||||    
T  1551605 aaggaatccaaaagtagaaaaattgtcttttaaatataaagtgttacttttgaccaactaattatgacaccactttttaataaaatcttacctctttt 1551508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1054 - 1144
Target Start/End: Original strand, 22266240 - 22266328
Alignment:
Q  1054 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    |||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||   |||||||||||||||||| ||||||||| |||||    
T  22266240 tagaaaaattgtcttgaaaacataaactgttactttttactaactaattattac--cactttttaataaaatcttacctcttttaactgct 22266328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Complemental strand, 35762399 - 35762296
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| ||||||||||||||  |  ||| ||||||||||||||| |||||| ||| |||||||||||  ||||||||||||||| ||||||||||||     
T  35762399 aaggaatccaaaaatagaaaaaaaaatttgaaaatataaactgtta-ttttgattaattaattattacaccactttttaataaaattttgcctcttttaa 35762301  T
Q  1140 ctgct 1144  Q
    |||||    
T  35762300 ctgct 35762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 6460465 - 6460284
Alignment:
Q  418 tgcgtttgatttgctaaaaaa---tgaaggacatgacaaaacaactccagttgtctagtgtttgattt-gtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||||||||||||||||||   ||||||| | ||||  | ||| | ||||||  | |||||||||| ||||| |||||| ||  ||| ||||| ||||    
T  6460465 tgcgtttgatttgctaaaaaaaaatgaaggataagacatgataacccaagttgtacattgtttgattttgtaaagctgttttagagacatgacaatctgg 6460366  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaact-ttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  ||| ||||||||||        |||| |||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  6460365 aggcaagggacaagacaaaaatt--------tgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaatac 6460284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1035 - 1121
Target Start/End: Complemental strand, 37564865 - 37564779
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaata 1121  Q
    |||| |||||||  |||| ||||||||||||||| ||||||||  | |||||||||||| || |||||||||||  |||||||||||    
T  37564865 tggttaaggaatctaaaagtagaaaaattatctttgaaatatatgcggttacttttgaccaattaattattacaccactttttaata 37564779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 473 - 602
Target Start/End: Complemental strand, 54322 - 54193
Alignment:
Q  473 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactt 572  Q
    ||||||||||||||||||||||| |  ||| ||||| | |||  ||||  ||||||||||||   | |||||||||| |    |||||||||||||||||    
T  54322 tgtttgatttgtaaaactgtttctgagacatgacaatccggacacaagggacatgacaaaaacataaatttttgtcctttgctaaaccacatcacaactt 54223  T
Q  573 tttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||  |||||||| || |||||||    
T  54222 tttgtcccacatacaagttatcgaaaatac 54193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1040 - 1137
Target Start/End: Original strand, 9791864 - 9791960
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 1137  Q
    ||||||| ||| |||| ||||||| ||||| |||||||||||| || ||||||  |||||||||||| |  |||||||||||||||||| | ||||||    
T  9791864 aaggaatccaagaata-aaaaattgtcttgaaaatataaactgctatttttgatcaactaattattatatcactttttaataaaatcttacttctttt 9791960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 421 - 601
Target Start/End: Original strand, 10320180 - 10320358
Alignment:
Q  421 gtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||| |||||  | || |||||||| || |||||| || ||||||||||||||||| |||| ||| ||| |||||||| || ||||    
T  10320180 gtttgatttgctaaaaaaatgaagaccgtg-caaaacaattcaagttgtataatgtttgatttgtaaaaccgttttagggacatgacaaacttga-gcaa 10320277  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |  ||   | |||||  || ||| || ||||||| ||||||||| |||||||||||  | || |||||||||||||||||||    
T  10320278 gggac-gaaaaaaaacagaaattcttatccctcaccaaaccacaacacaactttttaccacacgtacaagttgtctaaaata 10320358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 511 - 602
Target Start/End: Original strand, 27109532 - 27109623
Alignment:
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  |||||| ||||   ||||||||||| ||| | ||||||||| ||||||||||||||||  |||||| |||| ||||||||    
T  27109532 tggaggcaagggacatgataaaatcagatatttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaatac 27109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1057 - 1107
Target Start/End: Original strand, 13904055 - 13904105
Alignment:
Q  1057 aaaaattatcttggaaatataaactgttacttttgactaactaattattac 1107  Q
    ||||||| ||||| ||||||||||||||| ||||||| |||||||||||||    
T  13904055 aaaaattgtcttgaaaatataaactgttatttttgaccaactaattattac 13904105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 416 - 498
Target Start/End: Complemental strand, 15351902 - 15351820
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcagg 498  Q
    ||||||||| ||||||||||||||||| ||  | ||| ||||||| ||||| |   ||||||||||||||||| |||||||||    
T  15351902 ggtgcgtttcatttgctaaaaaatgaatgatgtaacagaacaactacagttatgccgtgtttgatttgtaaaattgtttcagg 15351820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1044 - 1092
Target Start/End: Complemental strand, 12201898 - 12201850
Alignment:
Q  1044 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttga 1092  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  12201898 aattcaaaaatagaaattttgtcttggaaatataagctgttacttttga 12201850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1044 - 1092
Target Start/End: Complemental strand, 12446326 - 12446278
Alignment:
Q  1044 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttga 1092  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  12446326 aattcaaaaatagaaattttgtcttggaaatataagctgttacttttga 12446278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 11944944 - 11944898
Alignment:
Q  556 aaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  11944944 aaaccacactacaactttttgtctcatgtacaatttgtctaaaatac 11944898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 14959027 - 14958983
Alignment:
Q  556 aaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||    
T  14959027 aaaccacaacacaactttttgtcccacgtacaag-tgtctaaaata 14958983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 418 - 491
Target Start/End: Complemental strand, 42110768 - 42110695
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactg 491  Q
    |||| ||||||||||||||| | |||||| | |||  |||| | || |||| ||||||||||||||||||||||    
T  42110768 tgcgcttgatttgctaaaaagtaaaggacgtaacatgacaaattcaattgtatagtgtttgatttgtaaaactg 42110695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 4e-72; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 11963550 - 11963364
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11963550 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 11963451  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||    
T  11963450 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaatac 11963364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 24181512 - 24181697
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  24181512 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagc 24181611  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| || |||||||||||||| ||| ||||||||||||||||    
T  24181612 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtctaaaatac 24181697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 7523376 - 7523195
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||| | |||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7523376 gtttgatttgctaaaaaatgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 7523277  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7523276 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 7523195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 32528923 - 32528738
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  32528923 gtgcgtttgatttgctaaaaaatgaaggacatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaga 32528824  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  32528823 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 32528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 4689580 - 4689771
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  4689580 ttaagggttcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaac 4689679  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  ||| ||||||||   |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  4689680 tggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatac 4689771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 8137046 - 8136860
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||| | |||| |||||||| ||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  8137046 ggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaactggag 8136947  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  8136946 gcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaatac 8136860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 34795096 - 34794910
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||| |||    
T  34795096 ggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaactagag 34794997  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  34794996 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttgtctaaaatac 34794910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 39918716 - 39918530
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  39918716 ggtgcgtttgatttgctaaaaaatgaaggacaggacaagacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaagacaaactggag 39918617  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  39918616 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 39918530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 3735565 - 3735380
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| ||||||    
T  3735565 gtgcgtttgatttgctaaaaaatgaagaacatgacagaacaactccagttgtccagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggagg 3735466  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||   ||| |||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  3735465 caatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 3735380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 2351889 - 2351703
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||| ||||||  |||||||||||||||||||||||| ||||| ||||||||||||||    
T  2351889 ggtgcgtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgttcagtgtttgatttgtaaaactgtttaaggtataggacaaactggag 2351790  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  2351789 gcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 2351703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 7770166 - 7770352
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  7770166 ggtgcgtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggag 7770265  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| ||||||||   |||||||||||| ||| ||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  7770266 gcaagggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatac 7770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 31879963 - 31880149
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| || | |||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  31879963 ggtgcgtttgatttgctaaaaaatgaaggacaagatataacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaactggag 31880062  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  31880063 gcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaatac 31880149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 35701486 - 35701300
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| || | |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  35701486 ggtgcgtttgatttgctaaaaaatgaaggacaagatagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactggag 35701387  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| || |||||||||| ||| ||||||||||||||||||||    
T  35701386 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaatac 35701300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 41459797 - 41459613
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  41459797 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtttagtatttgatttgtaaaactgtttcaggtacaggacaaactggag 41459698  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| || ||||| | |||||||||||||||| ||||||| | ||||||||||||| ||| |||||||||||||||||||    
T  41459697 gcaagggacaaga-aaaaactcatatttttgtccctcaccaaaccagagcacaactttttgttccacgtacaagttgtctaaaata 41459613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 31644655 - 31644469
Alignment:
Q  416 ggtgcgtttgatttgct-aaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31644655 ggtgcgtttgatttgcttaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 31644556  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| | || |||||| | | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  31644555 ggcaag-agcaagacaaatactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 31644469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 553601 - 553420
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||| | |||||| |||||||  | |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  553601 gtttgatttgctaaaaaatgaagaatatgacagaacaactttaattgtctagtgtttgatttataaaactgtttcaagtacaggacaaactggaggcaag 553502  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||| |||||||| | ||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  553501 agacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 553420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 39788401 - 39788216
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||| ||||||| |||| ||||| || ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||    
T  39788401 gtgcgtttgatttgttaaaaaataaaggacaggacagaacaattctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactgtagg 39788302  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||   ||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39788301 caaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 39788216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 31770480 - 31770664
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||| |||||||||||| |||||||| ||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  31770480 tgcgtttgatttgctaaaaaataaaggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggc 31770579  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  31770580 aagggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaatac 31770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 24036436 - 24036253
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||||||| ||| |||||||||| || ||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  24036436 tgcgtttgatttgctaaaaaatgaag-acaggacaaaacaattcaagttgtccagtgtttgatttggaaaactgtttcaggtacagcacaaattggaggc 24036338  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||  | |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  24036337 aagggacaggacaaaatctcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaatac 24036253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 7208117 - 7208303
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||||||||||||||||||||||||||  ||| |||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||     
T  7208117 ggtgcatttgatttgctaaaaaatgaaggacagaacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacgggacaaactggat 7208216  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| |||  || |||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  7208217 gcaagagacagaaccaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 7208303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 8560869 - 8561055
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| |  ||||||||||||||||||||||||||| |||||||||||||| |     
T  8560869 ggtgcgtttgatttgctaaaaaacgaaggacgtgacataacaacttcagttattcagtgtttgatttgtaaaactgtttcagatacaggacaaactgaaa 8560968  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  8560969 gcaaaggacaagacaaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaatac 8561055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 18470315 - 18470498
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||||||||| |||||||||||||||| |||| ||||||||||||| || |||||||||||||||||||||||||||| |||| |||||||| ||    
T  18470315 ggtgcttttgatttgttaaaaaatgaaggacaagacagaacaactccagttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaag 18470414  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  ||| |||||||| ||| |||||||||||| | ||||||||| ||||||||||| ||||| |||||||||||||||||    
T  18470415 gcaagggacaagacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaa 18470498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 27838961 - 27839146
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  27838961 ggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaag 27839060  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| || ||||  | | |||||||||||||| ||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  27839061 gcaatggacaggataaaacat-aaatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaatac 27839146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 29241587 - 29241402
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||| || | || |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  29241587 ggtgcgtttgatttgctaaaaaatgaaggccaggccagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggag 29241488  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| | |||||  | |||||||||||||||  ||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  29241487 gcaagggacaggccaaaagctcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttggctaaaata 29241402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 417 - 601
Target Start/End: Original strand, 23091192 - 23091376
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||| |||| || | ||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23091192 gtgcgtttgatttgctaaaaaatgaatgacaagatataactactcaagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggagg 23091291  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||  ||| |||||||| | |||||||||||| ||| ||||||||| |||||||||||||| || ||| || ||||||||||||    
T  23091292 caagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtctaaaata 23091376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 422 - 602
Target Start/End: Original strand, 41790356 - 41790535
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||| ||||||||||||| |||| |||| ||||| |  ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  41790356 tttgattcgctaaaaaatgaaagacaggacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcag-tacaggacaaactggaggcaata 41790454  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || |||||| |||||||||||||    
T  41790455 aacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatac 41790535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 463 - 602
Target Start/End: Original strand, 21739095 - 21739234
Alignment:
Q  463 agttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccac 562  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| | |||||||||||||||| ||||||||    
T  21739095 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 21739194  T
Q  563 atcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||||||||||||||||| ||||||||||||||||||||    
T  21739195 agcacaactttttgtcccacgtacaagttgtctaaaatac 21739234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 432 - 601
Target Start/End: Original strand, 22493322 - 22493491
Alignment:
Q  432 taaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaa 531  Q
    |||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||   ||| |||||    
T  22493322 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggataaactggagccaaaggacaagacaa 22493421  T
Q  532 aaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||| | |||||||||||||||| ||||||||| |||||||||||||| || |||||||||||||||||||    
T  22493422 aaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaata 22493491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 422 - 598
Target Start/End: Original strand, 7725702 - 7725878
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||| |||||| |||||||||| ||| |||||||||| |||||     
T  7725702 tttgatttgctaaaaaattaaggacaggacaaaacaacttcagttgtccagtgtttgattagtaaaattgtttcaggtgcagaacaaactggatgcaagg 7725801  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaa 598  Q
     |||||||||||| | |||||||||||| |||  |||||||| ||||||||||||||||| ||| ||||||||||||    
T  7725802 gacatgacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaa 7725878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 40489545 - 40489360
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||| ||||||| |||| || ||||| | ||||  |||||||||||||||||||||||||||||| | ||||||||||||    
T  40489545 ggtgcgtttgatttgctaaaaaat-aaggacaggacagaataactctaattgttcagtgtttgatttgtaaaactgtttcaggtagaagacaaactggag 40489447  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||  |||||||| | |||||||||||||||| |||| |||| |||||||||||||||||  |||||||||||||||||||    
T  40489446 gcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaatac 40489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 474 - 602
Target Start/End: Original strand, 4818085 - 4818213
Alignment:
Q  474 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttt 573  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||||| ||||||||| |||||||||    
T  4818085 gtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaacttt 4818184  T
Q  574 ttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| ||||||||||||||||||||    
T  4818185 ttgtcccacgtacaagttgtctaaaatac 4818213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 417 - 601
Target Start/End: Complemental strand, 5598688 - 5598504
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||| ||||||| | |||||||||||||||||||||||||||||  |||||||||||||    
T  5598688 gtgcgtttgatttgctaaaaaatgaagcacagaacagaacaactcaagttgtccaatgtttgatttgtaaaactgtttcaggtacgagacaaactggagg 5598589  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||  | | ||||||||  ||||||||||||| ||| ||||| ||| |||||||||||||| || |||||| ||||||||||||    
T  5598588 caagggagaggacaaaaacagatatttttgtccttcatcaaacaacagcacaactttttgtctcacgtacaacttgtctaaaata 5598504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 5571544 - 5571717
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||             |||||||||||||||||||||    
T  5571544 ggtgcgtttgatttgctaaaaaatgaaggacaaaacaaaacaactctagttgtccagtgtttgatt-------------caggtacaggacaaactggag 5571630  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||||| |||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  5571631 gcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaatac 5571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 6284188 - 6284371
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| |||||||||||||||  || || |  |||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6284188 gtgcgtttgatttgttaaaaaatgaaggacgggagaata--actttagttgtccagtgtttgatttgtaaaactgcttcaggtacaggacaaactggagg 6284285  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    || |  ||| |||||||| | || ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  6284286 catgggacaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaatac 6284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 92; E-Value: 5e-44
Query Start/End: Original strand, 471 - 602
Target Start/End: Original strand, 28090462 - 28090593
Alignment:
Q  471 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac 570  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||| | |||||||||||||||| ||||| ||| ||||||    
T  28090462 agtgtttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaac 28090561  T
Q  571 tttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||| ||||||||||||||||||||    
T  28090562 tttttgtcccacgtacaagttgtctaaaatac 28090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 473 - 602
Target Start/End: Original strand, 22432253 - 22432382
Alignment:
Q  473 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactt 572  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||| ||||| ||    
T  22432253 tgtttgatttgtaaaactgtttcaggttcaggataaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccacaacacaattt 22432352  T
Q  573 tttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| || ||||||||||||||||||||    
T  22432353 tttgtctcaagtacaagttgtctaaaatac 22432382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 421 - 602
Target Start/End: Original strand, 32092874 - 32093054
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||||||||  |||||||||||||||| |||| |||||||||||||||  |||||||||||||||||| ||||||||| |||||||||| |||||||||     
T  32092874 gtttgattttataaaaaatgaaggacaagacagaacaactccagttgtgcagtgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaa 32092973  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      | | |||||||| ||| |||||||| ||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||    
T  32092974 ggataggacaaaaactgaaatttttgt-cctcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaatac 32093054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 416 - 571
Target Start/End: Original strand, 37148476 - 37148631
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||||||    
T  37148476 ggtgcgtttgatttgttaaaaaatgaaggatatgacagaacaactccagttgtcaattgtttgatttgtaaaactgtttcagggacagaacaaactggag 37148575  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaact 571  Q
    |||||  ||  |||||||| ||| |||||||| ||||| ||||||||  |||||||    
T  37148576 gcaagggacgggacaaaaactgaaatttttgttcctcaccaaaccacggcacaact 37148631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 441 - 602
Target Start/End: Original strand, 700513 - 700674
Alignment:
Q  441 aaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgata 540  Q
    ||||||||||||||||||||| ||||||  | || ||||||||||||||||||||||||||| |||||||  ||| ||||  |||  ||||||||| |||    
T  700513 aaggacatgacaaaacaactctagttgttcaatgattgatttgtaaaactgtttcaggtacaagacaaacaagagacaagggacaaaacaaaaattcata 700612  T
Q  541 tttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||| ||||| ||||||||| |||||||||||||| || ||||||||| ||||||||||    
T  700613 tttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaatac 700674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 416 - 533
Target Start/End: Complemental strand, 4665040 - 4664923
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  4665040 ggtgcgtttgatttgattaaaaatgaaggacatgacagaacaactccagttatccagtgtttgatttgtaaaacagtttcagggacaggacaaacaggag 4664941  T
Q  516 gcaagaaacatgacaaaa 533  Q
    |||||  |||||||||||    
T  4664940 gcaagggacatgacaaaa 4664923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 432 - 602
Target Start/End: Complemental strand, 17031350 - 17031180
Alignment:
Q  432 taaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaa 531  Q
    |||||||||||||||| ||||| ||||||||| |||| || |||||||||||||||||||||||||| |||| ||||| |||||||||   ||| |||||    
T  17031350 taaaaaatgaaggacaagacaacacaactccacttgtataatgtttgatttgtaaaactgtttcagggacagtacaaattggaggcaaaggacaggacaa 17031251  T
Q  532 aaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||   | ||||||| ||||||  ||| |||| |||||||||| |||||| ||||||||| | ||||||||    
T  17031250 aaacataaatttttgcccctcattaaatcacagcacaacttttcgtcccacgtacaagttatttaaaatac 17031180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 426 - 586
Target Start/End: Complemental strand, 5673329 - 5673178
Alignment:
Q  426 atttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaaca 525  Q
    |||||||||||||||||||||| |||| |||||||| |||||| |  ||||||||||||         ||||||||| || ||||||||||||||  |||    
T  5673329 atttgctaaaaaatgaaggacaagacataacaactctagttgtttgatgtttgatttgt---------tcaggtacacgataaactggaggcaagggaca 5673239  T
Q  526 tgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtac 586  Q
     | |||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  5673238 agtcaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac 5673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 538 - 602
Target Start/End: Complemental strand, 40182551 - 40182487
Alignment:
Q  538 atatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40182551 atatttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 40182487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1004 - 1144
Target Start/End: Complemental strand, 35557027 - 35556890
Alignment:
Q  1004 gggtcttgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatta 1103  Q
    ||||||||||||| |||| ||||  ||||||| || |  |||||||||| |||||||||| ||||| ||||||||||||  | |||||||||||||||||    
T  35557027 gggtcttgttaaccagtgcctcg--agacatttgttacagaattcaaaagtagaaaaattgtcttgaaaatataaactgccatttttgactaactaatta 35556930  T
Q  1104 ttacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    |||||  || |||||||||| |||| |||||||||| ||||    
T  35556929 ttacaccac-ttttaataaattcttacctcttttagttgct 35556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1035 - 1144
Target Start/End: Complemental strand, 19129838 - 19129728
Alignment:
Q  1035 tggtcaaggaattcaaaaa-tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctc 1133  Q
    |||| ||||||| |||||| || ||||||| | |||||||||||||| | |||||||||||||||||||||||    | |||||||||||||||| ||||    
T  19129838 tggttaaggaatccaaaaagtaaaaaaattgtattggaaatataaacagctacttttgactaactaattattaatccattttttaataaaatcttacctc 19129739  T
Q  1134 ttttagctgct 1144  Q
    ||||| |||||    
T  19129738 ttttatctgct 19129728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1004 - 1102
Target Start/End: Complemental strand, 26139807 - 26139710
Alignment:
Q  1004 gggtcttgttaactagtgtc-tcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatt 1102  Q
    ||||||||||||| |||| | |||||| ||  |||| ||||||| ||||| |||||||| | |||||||||||||| | |||||||||||||||||||||    
T  26139807 gggtcttgttaaccagtgccctcgggatac--tggttaaggaatccaaaagtagaaaaactgtcttggaaatataaccggttacttttgactaactaatt 26139710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1056 - 1128
Target Start/End: Complemental strand, 8435151 - 8435079
Alignment:
Q  1056 gaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 1128  Q
    |||||||| ||||||||||||||| ||| ||||||||| ||||||| |||| |  | ||||||||||||||||    
T  8435151 gaaaaattgtcttggaaatataaagtgtaacttttgaccaactaataattataccattttttaataaaatctt 8435079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 417 - 460
Target Start/End: Complemental strand, 40182596 - 40182553
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaact 460  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  40182596 gtgcgtttgatttgctaaaaaatgaaggaaatgacagaacaact 40182553  T

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Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 416 - 454
Target Start/End: Original strand, 21739017 - 21739055
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaa 454  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  21739017 ggtgcgtttgatttgctaaaaaatgaaggacaggacaaa 21739055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1121
Target Start/End: Complemental strand, 10569060 - 10568975
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaata 1121  Q
    |||| ||||||| ||||| || ||||||| ||||  ||||||||||| |||||||||||  ||| |||||||||  |||||||||||    
T  10569060 tggttaaggaatccaaaagtaaaaaaattgtcttaaaaatataaacttttacttttgaccgact-attattacaccactttttaata 10568975  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 474 - 547
Target Start/End: Complemental strand, 35955150 - 35955077
Alignment:
Q  474 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgt 547  Q
    ||||||||||||||| |||||||   ||| ||||||||||||||| || ||| |||||||| ||| ||| ||||    
T  35955150 gtttgatttgtaaaattgtttcaaagacatgacaaactggaggcatgagacaagacaaaaactgaaattcttgt 35955077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 4e-69; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 416 - 601
Target Start/End: Original strand, 9732811 - 9732996
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9732811 ggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 9732910  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  9732911 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 9732996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 418 - 602
Target Start/End: Complemental strand, 7259104 - 7258920
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7259104 tgcgtttgatttgttaaaaaatgaaggacatgacagaacaactctagctgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 7259005  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  7259004 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 7258920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 414 - 601
Target Start/End: Complemental strand, 18686047 - 18685860
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18686047 aaggtgcgtttgatttgctaaaaaatgaaggacatgacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 18685948  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||   ||| |||||||| | ||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  18685947 aggcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 18685860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 411 - 602
Target Start/End: Complemental strand, 33889457 - 33889266
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33889457 ttaagggtgcgtttgatttactaaaaaatgaaggacaggacagaacaactctagttgtctagtgtttgatttgtaaaattgtttcagatacaggacaaac 33889358  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||||  ||| |||||||| | |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33889357 tggaggcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 33889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 34339019 - 34338833
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34339019 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 34338920  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  34338919 gcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttgtctaaaatac 34338833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 7761454 - 7761640
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  7761454 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagag 7761553  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  7761554 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 7761640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 37308864 - 37308678
Alignment:
Q  417 gtgcgtttgatttgctaaaaaa-tgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37308864 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 37308765  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  37308764 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaatac 37308678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 32498123 - 32497938
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||||||||||||||||| |||| || |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |||    
T  32498123 gtgcgtttgatttgctaaaaaatgaagggcatggcagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaagg 32498024  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| | |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32498023 caagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 32497938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 414 - 602
Target Start/End: Original strand, 2644966 - 2645153
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    |||||||||||||||||||||||||||||||||| || | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2644966 aaggtgcgtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 2645065  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  | | |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  2645066 aggcaag-gagaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctaaaatac 2645153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 3913343 - 3913527
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  3913343 tgcgtttgatttgctaaaaaataaaggacatgacaaaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtatatgacaaactggaggc 3913442  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| |||||||| | | || ||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  3913443 aagaaacaggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaatac 3913527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 422 - 602
Target Start/End: Complemental strand, 35114988 - 35114808
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  35114988 tttgatttgctaaaaaatgaaggacaagacaggacaactctagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 35114889  T
Q  522 aacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||| |||||||| | |||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  35114888 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaatac 35114808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 413 - 602
Target Start/End: Complemental strand, 17540927 - 17540738
Alignment:
Q  413 aaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactg 512  Q
    |||||||||||||||||| ||||||||||| || |||||| ||||| |  ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  17540927 aaaggtgcgtttgatttgttaaaaaatgaaagatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactg 17540828  T
Q  513 gaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17540827 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 17540738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 418 - 601
Target Start/End: Complemental strand, 44284836 - 44284653
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44284836 tgcgtttgatttgctaaaaaatgaaggacatgacagaacaactagagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggc 44284737  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||  ||| |||||||| | ||||||||||||||||  |||||||| |||||||||||||| || |||||||||||||||||||    
T  44284736 aagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaata 44284653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 28824438 - 28824624
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  28824438 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacagcacatactggag 28824537  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||||   || |||||||| | |||||||||||||||| ||||||||||||||||||||| || || || |||||||||||||||||    
T  28824538 tcaagggtcaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtctaaaatac 28824624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 33366819 - 33366633
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||||||||||||||||||||| |||||| ||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33366819 ggtgtgtttgatttgctaaaaaatgaaggatatgacagaacaattctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 33366720  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||| ||||| ||||||||| ||||||||||| |||||  |||||||||||||||||||    
T  33366719 gcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttgtctaaaatac 33366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 42365786 - 42365600
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  42365786 ggtgtgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaaccgtttcaggtacatgacaaactggag 42365687  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||| ||| ||||||||| ||||||||||| |  || | ||||||||||||||||||    
T  42365686 gcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttgtctaaaatac 42365600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 30798370 - 30798556
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||| || |||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  30798370 ggtgcgtttgatttgctaaaaaatgaagggca-gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 30798468  T
Q  516 gcaagaaacatg-acaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| | | ||||| | |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  30798469 gcaagggacaggaaaaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttatctaaaatac 30798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 16177764 - 16177950
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  16177764 ggtgtgtttgatttgctaaaaaatgaaggatatgacataacaactccaattgtccagtgtttgatttgtaaaactgtttcaagtacaggataaactggag 16177863  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||   ||| |||| ||| ||||||||||||| || | ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  16177864 gcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 16177950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 19513571 - 19513756
Alignment:
Q  418 tgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||| |||| || | |||||||||||||||||||||||||||||||||||||| |||||    
T  19513571 tgcgtttcatttgctaaaaaaatgaaggacaggacagaacaactctagttttccaatgtttgatttgtaaaactgtttcaggtacaggacaaacgggagg 19513670  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||   ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  19513671 caaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 19513756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 30326214 - 30326398
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30326214 gtgcgtttgatttgctaaaaaatgaaggacaggacagagcaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 30326313  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    || |  ||| |||||||| | ||| ||||||| |||  ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  30326314 caggggacaggacaaaaactcata-ttttgtctctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 30326398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 38992953 - 38993138
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||    
T  38992953 gtgcgtttgatttgataaaaaatgaaggacatgacagaataactccagttgtccagtgtttgatttgtaaaacagtttcaggaagaggacaaactggagg 38993052  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  ||| |||||||| |   |||||||| ||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38993053 caagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 38993138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 40692506 - 40692321
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  40692506 ggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttaatttgtgaaactgttttaggtacaagacaaactggag 40692407  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
     ||||  ||| |||||||| |  ||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||||||||    
T  40692406 acaagggacaggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtctaaaata 40692321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 416 - 600
Target Start/End: Complemental strand, 11115079 - 11114897
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||| ||||| ||| |||||||||||||||||    
T  11115079 ggtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactccaattgtccaatgtttgatttgtaaa-ctgtt-cagttacaggacaaactggag 11114982  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaat 600  Q
    |||||  ||| |||||||| | |||||||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  11114981 gcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaat 11114897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 6896377 - 6896194
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||| |||||||| |||||||||||||||||||||||||||| |||  |||||||||||    
T  6896377 ggtgcgtttgatttgttaaaaaatgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactggag 6896278  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  ||| || ||||| ||| |||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  6896277 gcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtctaaaa 6896194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 10399751 - 10399934
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||| |||||||||||||||||||||||||||||| | ||||||| |||||||  |||||||||||||||||||| |||||||||||||||||||| ||     
T  10399751 ggtgtgtttgatttgctaaaaaatgaaggacatgatagaacaacttcagttgttcagtgtttgatttgtaaaactatttcaggtacaggacaaactagat 10399850  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||| ||| |||||||| | |||||||||||| |||  |||||||| |||||||||||||| |||||| |||||||||||||    
T  10399851 gcaagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttgtctaaaa 10399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 32766385 - 32766572
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||| ||||||||  ||| |||||||  | ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  32766385 ggtgcgtttgatttgctaaaaaacgaaggacagaacagaacaactataattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 32766484  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac-tttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| |||||||||||||||||| ||||||||| |||||| ||||||||| | ||||| ||||||||||||||    
T  32766485 gcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggttgtctaaaatac 32766572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 420 - 602
Target Start/End: Original strand, 5278720 - 5278901
Alignment:
Q  420 cgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 519  Q
    |||||||||||||||||||| ||||| |||||| |||||||| | ||||   ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5278720 cgtttgatttgctaaaaaat-aaggatatgacagaacaactctaattgttaggtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaa 5278818  T
Q  520 gaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |  ||| |||||||| | |||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  5278819 gggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttgtctaaaatac 5278901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 435 - 602
Target Start/End: Complemental strand, 42706549 - 42706382
Alignment:
Q  435 aaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaa 534  Q
    ||||| ||||||| |||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||||||||    
T  42706549 aaaataaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaa 42706450  T
Q  535 ttgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     | |||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  42706449 ctcatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 42706382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 40832350 - 40832536
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||| ||||||||||||| |||| |||||||| |||||||  ||||||| ||||||||||||||||| || ||||||||||| ||||||||||||    
T  40832350 ggtgcttttaatttgctaaaaaaggaagcacatgacataacaacttaagttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactggag 40832449  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| ||||||||  ||||||||||||||||| ||||||||| |||||||||||||| || |||||||| |||||||||||    
T  40832450 gcaagggacaggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaatac 40832536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 411 - 596
Target Start/End: Original strand, 38623180 - 38623365
Alignment:
Q  411 ttaaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaac 510  Q
    |||| |||| |||||||||| |||||| |||||||||||||| ||||||| ||||| || | |||||||||||||||||||||||||| |||||||||||    
T  38623180 ttaagggtgtgtttgatttgttaaaaattgaaggacatgacataacaacttcagttatccaatgtttgatttgtaaaactgtttcagggacaggacaaac 38623279  T
Q  511 tggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtcta 596  Q
    | |||||||   | | |||||||| ||| |||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||    
T  38623280 ttgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtcta 38623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 432 - 602
Target Start/End: Original strand, 26981606 - 26981776
Alignment:
Q  432 taaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaa 531  Q
    ||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||||   |||||||||    
T  26981606 taaaaaatgaaggacagaacagaacaactccagttgtccagtgtttgatttgtaaaactgttccagatacaagacaaacgggaggcaaatgacatgacaa 26981705  T
Q  532 aaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||| | |||||||||||||||| ||||||||| || |||||||||| | | ||||||||||||||||||||    
T  26981706 aaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaatac 26981776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 418 - 599
Target Start/End: Complemental strand, 30713067 - 30712882
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  30713067 tgcgtttgatttgttaaaaaatgaaagacatgacaaaacaactccagttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggc 30712968  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagca----aaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||  ||| |||| ||| ||| |||||||||||||| ||    ||||||| ||||||||||| ||||| ||| |||||||||||||    
T  30712967 aagggacaggacacaaactgaaatttttgtccctcaccaaattaaccacaacacaactttttatcccacgtagaagttgtctaaaa 30712882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 39461518 - 39461337
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||||||||||||||||||||| || | ||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39461518 gtttgatttgctaaaaaatgaaggacaggatagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 39461419  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaa---accacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      ||| |||||||||||   ||||||||||||| |||   || ||| ||||||||||| || || ||||||| ||||||||||||    
T  39461418 tgacaggacaaaaattg---tttttgtccctcaccaaatcacaacaacacaactttttatctcacgtacaagctgtctaaaatac 39461337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 440 - 602
Target Start/End: Complemental strand, 16104459 - 16104297
Alignment:
Q  440 gaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgat 539  Q
    |||||| | |||| |||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||  ||| |||||||| | ||    
T  16104459 gaaggataggacagaacaactatagttgtccagtgtttgatttgtaaaactgtttcagatacacgacaaattggaggcaagggacaggacaaaaactcat 16104360  T
Q  540 atttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||||| ||||||||| |||||||||||||| || |||||| |||||||||||||    
T  16104359 atttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaatac 16104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 416 - 518
Target Start/End: Original strand, 37863247 - 37863349
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37863247 ggtgcgcttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 37863346  T
Q  516 gca 518  Q
    |||    
T  37863347 gca 37863349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 41365992 - 41366177
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||| ||||  ||| || | |||||||||| ||||  | |||||||||||| |||| |||||||| ||| |||||||||||||    
T  41365992 gtgcgtttgatttgctaaaaactgaaaaacaagatagaacaactccaattgtgcaatgtttgatttgtgaaacagtttcagggacatgacaaactggagg 41366091  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| | | |||||||| ||| |||||||||||||| ||||||||| ||||| |||||||| ||  |||||||||||||||||||    
T  41366092 caagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtctaaaatac 41366177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 430 - 602
Target Start/End: Original strand, 12672373 - 12672541
Alignment:
Q  430 gctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgac 529  Q
    |||||||||||||||||| ||     |||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||  ||  |||    
T  12672373 gctaaaaaatgaaggacaagag----caactctagttgtcctgtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacgggac 12672468  T
Q  530 aaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||  | |||||||||||||||| ||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  12672469 aaaatctcatatttttgtccctcaccaaaccacaacacaagtttttatcccaagtacaagttgtctaaaatac 12672541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 2086270 - 2086095
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| | |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  2086270 gtgcgtttgatttgctaaaaaatgaaggacaagacaga-caactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagg 2086172  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||         ||||||| | ||||||||||||||   |||||||||  ||||||||||||  || ||||||||||||| ||||||    
T  2086171 ca---------acaaaaactcatatttttgtccctacccaaaccacagtacaactttttgtttcacgtacaagttgtctgaaatac 2086095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 8112510 - 8112326
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctag-tgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    |||| ||||||||| |||||| || ||| ||||||||| || |||| ||||||| || |||||||||||||||| |||||||||||||| ||||||||||    
T  8112510 ggtgtgtttgatttactaaaagataaagaacatgacaatactactctagttgtcaaggtgtttgatttgtaaaattgtttcaggtacagaacaaactgga 8112411  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||||| |||  ||||||| | ||||||||||| |||| ||||||||| ||||||||||||| |||  ||||| | ||||||||    
T  8112410 ggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgttccagatacaaatagtctaaaa 8112326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 416 - 509
Target Start/End: Complemental strand, 9717410 - 9717317
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaa 509  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  9717410 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaa 9717317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1043 - 1144
Target Start/End: Original strand, 19994924 - 19995025
Alignment:
Q  1043 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 1142  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||| ||||||||| |||    
T  19994924 gaatccaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacatcactttttaataaatgcttacctcttttaactg 19995023  T
Q  1143 ct 1144  Q
    ||    
T  19995024 ct 19995025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 422 - 544
Target Start/End: Original strand, 18793180 - 18793300
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||   ||||||||||||||||||||||||||||||||| |||||  |||||||||     
T  18793180 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgctcagtgtttgatttgtaaaactgtttcaggtacagtacaaa--ggaggcaagg 18793277  T
Q  522 aacatgacaaaaattgatatttt 544  Q
     |||||||||||| | |||||||    
T  18793278 gacatgacaaaaactcatatttt 18793300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 433 - 602
Target Start/End: Complemental strand, 4641706 - 4641539
Alignment:
Q  433 aaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaa 532  Q
    ||||||||||||| | |||| |||||||  ||||||  |||||||||||||||||||||||||||||||| |||||||||||||   |  ||   |||||    
T  4641706 aaaaaatgaaggaaaagacagaacaactttagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagg--tgggacggaacaaa 4641609  T
Q  533 aattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| ||||||||||| |||| ||||||||| |||||||||||||| ||  |||||||||| ||||||||    
T  4641608 aattcatatttttgtctctcaccaaaccacagcacaactttttgtctcacatacaagttgtttaaaatac 4641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 416 - 599
Target Start/End: Complemental strand, 13829635 - 13829464
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| ||||||| |||||||||||||| ||||            ||||||||||||||    
T  13829635 ggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtgaaac------------aggacaaactggag 13829548  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    | |||  ||| |||||||| ||| |||||||||| |||  | |||||||||||||||||||||||| ||||||||| |||||||    
T  13829547 gtaagggacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaa 13829464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 418 - 575
Target Start/End: Original strand, 27462685 - 27462842
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||  ||||| ||||| |||| || | ||||| | |||||||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  27462685 tgcgtttgattttttaaaagatgaaagacaggatataacaatttcagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactgtagac 27462784  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaacttttt 575  Q
    |||  ||| |||||||  || ||||||||||||||| ||||||||| |||||||||||    
T  27462785 aagggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaacttttt 27462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1032 - 1139
Target Start/End: Complemental strand, 36622222 - 36622114
Alignment:
Q  1032 cattggtcaaggaattcaaaaa-tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgc 1130  Q
    ||||||| |||||||  ||||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |    
T  36622222 cattggttaaggaataaaaaaagtagaaaaattgtcttagaaatataaactattacttttgactaactaattattacacaactttttaataaaatcttac 36622123  T
Q  1131 ctcttttag 1139  Q
    |||||||||    
T  36622122 ctcttttag 36622114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 37003772 - 37003858
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtaca 502  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  37003772 ggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactcaagttgtccagtgtttgatttgtaaatctgtttcaggtaca 37003858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 428 - 602
Target Start/End: Original strand, 15303133 - 15303307
Alignment:
Q  428 ttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatg 527  Q
    |||||||||||| ||||| ||||||| |||| |  | || | |||| ||||||||||||||||| |||||  |||||||||||| ||||||||| |||||    
T  15303133 ttgctaaaaaataaaggatatgacaagacaatttaaattatatagtatttgatttgtaaaactgcttcagagacaggacaaactagaggcaagacacatg 15303232  T
Q  528 acaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||   | |||||||||| | | ||||| ||||||||||||||||| |||  |  ||||||||||||||||    
T  15303233 acaaaaacataaatttttgtcctttatcaaactacatcacaactttttgttccacatgtaagttgtctaaaatac 15303307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 419 - 602
Target Start/End: Original strand, 12939202 - 12939367
Alignment:
Q  419 gcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 518  Q
    ||||||||||| ||||||||||||||| | |||| ||||||| |||||||| |||||||||||| ||||||||                  |||||||||    
T  12939202 gcgtttgatttactaaaaaatgaaggataagacagaacaacttcagttgtccagtgtttgatttataaaactg------------------ctggaggca 12939283  T
Q  519 agaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||  |||||||||||| |||||||||||||| ||| ||||||||| ||||||||||| || || ||||||||||||||| ||||    
T  12939284 agggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagatac 12939367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1040 - 1144
Target Start/End: Complemental strand, 41385149 - 41385045
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| |||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||| |||  |||||| |||||||| || | ||||||||    
T  41385149 aaggaatccaaaaatagaaaaattgtattggaaatataaattgttacttttgaccaactaattatcacaccacttttcaataaaatattacttcttttag 41385050  T
Q  1140 ctgct 1144  Q
    |||||    
T  41385049 ctgct 41385045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 523 - 602
Target Start/End: Complemental strand, 26419025 - 26418946
Alignment:
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||||||| | |||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26419025 acatgacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 26418946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1040 - 1143
Target Start/End: Complemental strand, 43248811 - 43248708
Alignment:
Q  1040 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 1139  Q
    ||||||| ||||| |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||  | ||||| |||||||||| | |||||||     
T  43248811 aaggaatccaaaagtagaaaaattgtcttagaaatataaactgttacttttgaccaactaattattacaccaatttttgataaaatcttacttcttttat 43248712  T
Q  1140 ctgc 1143  Q
    ||||    
T  43248711 ctgc 43248708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1067 - 1144
Target Start/End: Original strand, 16498137 - 16498214
Alignment:
Q  1067 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  16498137 ttggaaatataaattgttaattttgactaactaattattacatcactttttaataaaatcttacctcttttaactgct 16498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1048 - 1141
Target Start/End: Original strand, 19606282 - 19606375
Alignment:
Q  1048 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagct 1141  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||| | ||| ||||||    
T  19606282 caaaagtagaaaaactattttggaaatataaactgttacttttgatgaactaattattacaccactttttaataaaatcttacatctcttagct 19606375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1035 - 1144
Target Start/End: Complemental strand, 35501515 - 35501406
Alignment:
Q  1035 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 1134  Q
    |||| ||||| | ||||| ||||||||||   ||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||| | |||    
T  35501515 tggttaaggattccaaaagtagaaaaattgatttggaaatataaacttttatttttgactaactaattattacatcactttttaataaaatcttacttct 35501416  T
Q  1135 tttagctgct 1144  Q
    |||| |||||    
T  35501415 tttacctgct 35501406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 422 - 602
Target Start/End: Complemental strand, 41934785 - 41934604
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaa-ctccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    ||||||||| |||||||||||| |||||| |  |||| ||| |||||| |||||| ||||||||||||||| || ||| |   || |||||||| ||||     
T  41934785 tttgatttgttaaaaaatgaagaacatgatatgacaaactcaagttgtatagtgtgtgatttgtaaaactgattaagggatgagataaactggatgcaaa 41934686  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    | ||| |||||||| ||| ||| |||| | |||  |||||||| ||||||||||||||| | ||| ||||||||||||||||    
T  41934685 agacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaatac 41934604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 9717322 - 9717247
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| | || ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9717322 gacaaaaactcatgtttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 9717247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 523 - 602
Target Start/End: Original strand, 37003856 - 37003935
Alignment:
Q  523 acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||| ||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  37003856 acataacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaatac 37003935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 416 - 519
Target Start/End: Original strand, 45463003 - 45463107
Alignment:
Q  416 ggtgcgtttgatttgctaaa-aaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||| |||| ||||||| || |||||| |||||||||||||||  |   ||||||||||||||||| |||||||||| ||||||| |||    
T  45463003 ggtgcgtttgatttgttaaacaaatgaaagagatgacataacaactccagttgttcaacatttgatttgtaaaactgcttcaggtacaagacaaacagga 45463102  T
Q  515 ggcaa 519  Q
    |||||    
T  45463103 ggcaa 45463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 538 - 601
Target Start/End: Complemental strand, 1247234 - 1247171
Alignment:
Q  538 atatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||    
T  1247234 atatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 421 - 516
Target Start/End: Complemental strand, 83474 - 83379
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||| || ||||||| |||||||||||||| |||||| ||||||   ||||||||||||||||||||||||  || ||| |||||||| ||||    
T  83474 gtttgatctgttaaaaaacgaaggacatgacaagacaacttcagttgcacagtgtttgatttgtaaaactgtttgtgggacatgacaaactagagg 83379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 470 - 602
Target Start/End: Complemental strand, 26796383 - 26796251
Alignment:
Q  470 tagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaa 569  Q
    |||||||||||||||||||||||| || | |||  |||||||  ||||||   | | || ||||||| | |||| |||||||||  ||| |||| | |||    
T  26796383 tagtgtttgatttgtaaaactgttacaaggacaaaacaaacttcaggcaatggataggataaaaattaaaatttgtgtccctcactaaagcacaacgcaa 26796284  T
Q  570 ctttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||||| || ||||||||||||||||||||    
T  26796283 ctttttgtcacacgtacaagttgtctaaaatac 26796251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 414 - 490
Target Start/End: Original strand, 31193947 - 31194023
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaact 490  Q
    |||||| ||||||| ||||||||||||||||| |  ||| ||||||| ||||||| || ||||||||||||||||||    
T  31193947 aaggtgtgtttgatatgctaaaaaatgaaggataaaacataacaacttcagttgtataatgtttgatttgtaaaact 31194023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 26419089 - 26419045
Alignment:
Q  418 tgcgtttgatttgctaaaaaa-tgaaggacatgacaaaacaactc 461  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  26419089 tgcgtttgatttgctaaaaaaatgaaggacatgacataacaactc 26419045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 414 - 490
Target Start/End: Original strand, 31212580 - 31212656
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaact 490  Q
    |||||| ||||||| | ||||||||||||||| |  |||  |||||| ||||||| || ||||||||||||||||||    
T  31212580 aaggtgtgtttgatatactaaaaaatgaaggataaaacatgacaacttcagttgtataatgtttgatttgtaaaact 31212656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1048 - 1108
Target Start/End: Original strand, 40664663 - 40664723
Alignment:
Q  1048 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 1108  Q
    ||||| || ||||||| |||||||||||||||||||||||||||   ||||||||| ||||    
T  40664663 caaaagtaaaaaaattgtcttggaaatataaactgttacttttggtcaactaattactaca 40664723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 417 - 452
Target Start/End: Complemental strand, 1247293 - 1247258
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgaca 452  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1247293 gtgcgtttgatttgctaaaaaataaaggacatgaca 1247258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 538 - 601
Target Start/End: Original strand, 45463113 - 45463176
Alignment:
Q  538 atatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    ||||||||||| |||| ||||||||| ||||||||||||||  | |||||  ||||||||||||    
T  45463113 atatttttgtcactcaccaaaccacaacacaactttttgtcatacgtacagattgtctaaaata 45463176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 581
Target Start/End: Original strand, 35170150 - 35170259
Alignment:
Q  472 gtgtttgatttgtaaaactgtttcaggtacaggacaaactg-gaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaac 570  Q
    |||||||||| ||||||||||| |||| |||  |||||||  | ||||||| ||| |||||||||||| |||||||||||||    ||| ||| ||||||    
T  35170150 gtgtttgatt-gtaaaactgttccagggacaaaacaaactatggggcaagagacacgacaaaaattgaaatttttgtccctcgctgaacaacaacacaac 35170248  T
Q  571 tttttgtccca 581  Q
    ||| |||||||    
T  35170249 tttctgtccca 35170259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1028 - 1117
Target Start/End: Complemental strand, 18717972 - 18717883
Alignment:
Q  1028 gagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaacttttt 1117  Q
    ||||||||||| |||||||| | |||||||||  |||| ||  ||||||||  ||||||||||||  || |||| |||||| ||||||||    
T  18717972 gagacattggttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaacttttt 18717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 133; Significance: 2e-68; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 414 - 602
Target Start/End: Complemental strand, 102160 - 101972
Alignment:
Q  414 aaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 513  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||||||||||||| |||||||||||  |||    
T  102160 aaggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaactgtttcatgtacaggacaacttgg 102061  T
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||   |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  102060 aggcaacggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 101972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 131; Significance: 2e-67; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 23784 - 23598
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||||||||||||||||| || |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  23784 ggtgcgtttgatttgctaaaaaatgaagggcaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgag 23685  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  |||||||||||| | |||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  23684 gcaagggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 23598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 131; Significance: 2e-67; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 15381 - 15195
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15381 ggtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 15282  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | ||||||||||||| || ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  15281 gcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 15195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 119; Significance: 4e-60; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 2226 - 2411
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||||||| || | |||||||  |||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  2226 ggtgcgtttgatttgctaaaaaatgaaggacaggatagaacaactttagttttc-agtgtttgatttgtaaaactgtttcaggtacaggacaaattggag 2324  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  2325 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 2411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 117; Significance: 6e-59; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 15260 - 15454
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    |||||||||||||||||||||||||||| |||||| | |||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  15260 ggtgcgtttgatttgctaaaaaatgaagaacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggataaactggag 15359  T
Q  516 gcaag----aa----acatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||    ||    |||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15360 gcaagggacaagatcacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatac 15454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 504 - 602
Target Start/End: Original strand, 13554 - 13652
Alignment:
Q  504 gacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||||||||| | |||||||||||||||| |||| |||| ||||  |||  ||  |||||||||||||| ||||||||||||||||| |||||    
T  13554 gacaaattggaggcaatagacatgacaaaaattgaaatttgtgtctctcactaaaatacgacacaactttttgtcacatgtacaagttgtctagaatac 13652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 112; Significance: 5e-56; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 13574 - 13757
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||    
T  13574 ggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggag 13673  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||||  | | |||||||| ||| |||||||||||||| |||||||||  ||||||||||||||||  ||||||||||||||||    
T  13674 gcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaa 13757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 110; Significance: 8e-55; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 418 - 599
Target Start/End: Original strand, 1532 - 1713
Alignment:
Q  418 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 517  Q
    ||||||||||||| ||||||||||||||||  ||| ||||||| ||||| || |||||||||||||||||||||||||| | | ||||||||||||||||    
T  1532 tgcgtttgatttgttaaaaaatgaaggacaaaacagaacaacttcagttctccagtgtttgatttgtaaaactgtttcaaggataggacaaactggaggc 1631  T
Q  518 aagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    |||  ||| |||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  1632 aagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 1713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 110; Significance: 8e-55; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 422 - 602
Target Start/End: Original strand, 5332 - 5513
Alignment:
Q  422 tttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 521  Q
    ||||||||||||||||||||||||||  ||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  5332 tttgatttgctaaaaaatgaaggacagaacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 5431  T
Q  522 aacatgacaaaaattg-atatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
     ||| ||||||||    |||||||||||||||| |||||||||||||||||||||||||||  ||||||||| |||||||||    
T  5432 gacaggacaaaaaacacatatttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttgcctaaaatac 5513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 107; Significance: 5e-53; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 417 - 599
Target Start/End: Original strand, 4467 - 4649
Alignment:
Q  417 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 516  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||| || || ||||| || ||||| ||||||    
T  4467 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggagg 4566  T
Q  517 caagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
    ||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  4567 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaa 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 106; Significance: 2e-52; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 51647 - 51463
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||||||||||||| ||||||||||||||||  ||| |||||||  | ||||| ||||||||||||||||||||||||||||| ||| ||||||||||     
T  51647 ggtgcgtttgatttgataaaaaatgaaggacaaaacagaacaactttaattgtccagtgtttgatttgtaaaactgtttcaggtgcagaacaaactggat 51548  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaata 601  Q
    |||||  ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  51547 gcaagggacaagacaaaaactcatatttttgtccctca-caaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 51463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 103; Significance: 1e-50; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 18979 - 19163
Alignment:
Q  416 ggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 515  Q
    ||||| ||| |||||||||||||||||||||| |||| ||||| |  | ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18979 ggtgcctttaatttgctaaaaaatgaaggacaggacagaacaattatatttgtccagtgtttgatttgtaaaactgtt-caggtacaggacaaactggag 19077  T
Q  516 gcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||| ||| ||||||| |  |||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  19078 gcaagagacaggacaaaactc-atatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatac 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 102; Significance: 5e-50; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 421 - 602
Target Start/End: Original strand, 372856 - 373037
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||| |||||||||||||||||||| |||||| ||||| |  ||||||| | ||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  372856 gttttatttgctaaaaaatgaaggatatgacagaacaattttagttgtcaaatgtttgatttgtaaaactgtttcaggtacagaaaaaactggagacaag 372955  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
      | |||||||||| | |||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  372956 ggatatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaatac 373037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 99; Significance: 3e-48; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 412 - 602
Target Start/End: Original strand, 2379 - 2568
Alignment:
Q  412 taaaggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 511  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||  |||||||||||||||||||||||||||||||| |||||| |    
T  2379 taaaggtgcgtttgatttgctaaaaattgaaggacaagacataacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaatt 2478  T
Q  512 ggaggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||| |||  ||| |||||||| | |||| ||||||||| | ||||||||| |||||| | ||||| || ||||||||||||||||||||    
T  2479 ggaggaaagggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaac-tattgtctcacgtacaagttgtctaaaatac 2568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 98; Significance: 1e-47; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 457 - 602
Target Start/End: Original strand, 17982 - 18127
Alignment:
Q  457 aactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacatgacaaaaattgatatttttgtccctcagca 556  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||  ||| |||||||| | |||||||||||||||| ||    
T  17982 aactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcacca 18081  T
Q  557 aaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  18082 aaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 18127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 12534 - 12609
Alignment:
Q  527 gacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  12534 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 12609  T

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Target: scaffold0050 (Bit Score: 91; Significance: 2e-43; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 421 - 599
Target Start/End: Original strand, 42843 - 43019
Alignment:
Q  421 gtttgatttgctaaaaaatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 520  Q
    |||||||||| |||||||||||||| | |||| |||||||||| | ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  42843 gtttgatttgttaaaaaatgaaggataagacagaacaactcca-tagtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 42941  T
Q  521 aaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaa 599  Q
      |||  ||||||| ||| |||| ||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  42942 ggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtacaa-ttgtctaaaa 43019  T

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Target: scaffold0047 (Bit Score: 72; Significance: 4e-32; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 416 - 578
Target Start/End: Original strand, 19042 - 19205
Alignment:
Q  416 ggtgcgtttgatttgctaaaa-aatgaaggacatgacaaaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 514  Q
    ||||||||||||||| ||||| ||||||||| | |||| ||||| ||||||| || |||||||||||||||||||||||||||| |||| | |||| |||    
T  19042 ggtgcgtttgatttgttaaaaaaatgaaggataggacataacaattccagttatccagtgtttgatttgtaaaactgtttcagggacagaataaacagga 19141  T
Q  515 ggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtc 578  Q
    |||||   ||| |||||||| ||| |||||||||||||| |||| | || ||||||||||||||    
T  19142 ggcaatggacaggacaaaaactgaaatttttgtccctcatcaaagctcaacacaactttttgtc 19205  T

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Target: scaffold0155 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 514 - 602
Target Start/End: Original strand, 33530 - 33617
Alignment:
Q  514 aggcaagaaacatgacaaaaattgatatttttgtccctcagcaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 602  Q
    |||||||  ||||||||||||| || ||| |||||||||| ||||||||| ||||||||||||||||| |||||| |||| ||||||||    
T  33530 aggcaagggacatgacaaaaat-gaaattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaatac 33617  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1057 - 1144
Target Start/End: Complemental strand, 24327 - 24240
Alignment:
Q  1057 aaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 1144  Q
    ||||||| | |||||||||||| || ||| ||||||| |||||||||| |||  |  ||||||||||||||| | |||||||||||||    
T  24327 aaaaattgtgttggaaatataaccttttatttttgaccaactaattatcacaccagcttttaataaaatcttacttcttttagctgct 24240  T

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Target: scaffold0886 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1124
Target Start/End: Original strand, 1098 - 1192
Alignment:
Q  1030 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 1124  Q
    |||| |||||||| |||| | ||||||||   || ||||| ||||||||||||| |||||| | ||| |||| ||||||  ||||||||||||||    
T  1098 gacactggtcaagaaatttataaatagaatttttttcttgaaaatataaactgtcactttttattaagtaataattacattactttttaataaaa 1192  T

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