View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9011_low_124 (Length: 273)
Name: NF9011_low_124
Description: NF9011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9011_low_124 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 258
Target Start/End: Original strand, 43756339 - 43756581
Alignment:
| Q |
16 |
tgtgaatacgtgagattaaattactggtctggaatgtatgattgataatacaattgaagcgacgaactacatttgaaaataaacctaagcaatgaactct |
115 |
Q |
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| T |
43756339 |
tgtgaatacgtgagattaaattactggtctggaatgtatgattgataatacaatcgaagcgacgaactacatttgaaaataaacctaagcaacgaactct |
43756438 |
T |
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| Q |
116 |
atttgnnnnnnnctacaggtctagaatgtttgtatgaaatgctctcttaaattgttttgtactatcaccnnnnnnnnttgataactacatgcacgaaatg |
215 |
Q |
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| T |
43756439 |
atttgaaaaaaactacaggtctagaatgtttgtatgaaatgctctcttaaattgtattgtactatcaccaaaaaaaattgataactacacgcacgaaatg |
43756538 |
T |
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| Q |
216 |
caagaaagtgtatggggctatcggttttcaaataagaactaag |
258 |
Q |
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| T |
43756539 |
caagaaagtgtatggggtaatcggttttcaaataagaactaag |
43756581 |
T |
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