View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9012_high_7 (Length: 206)
Name: NF9012_high_7
Description: NF9012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9012_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 40218628 - 40218796
Alignment:
| Q |
18 |
agatcaaaatgaaaggaattggagnnnnnnntaacacaattcaaaacacatttttcttgttttcgttatcctctttgagttgtcatagtcctaatttaat |
117 |
Q |
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| T |
40218628 |
agatcaaaatgaaaggaattggagaaaaaaataacacaattcaaaacacatttttcttgttttcgttatcctctttgagttgtcatagtcctaatttaat |
40218727 |
T |
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| Q |
118 |
tttcatctttattactaggtcatagtctatctaccgaagaaagttgacacatgtgcacgtttatgtcct |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40218728 |
tttcatctttattactaggtcatagtctatctaccgaagaaagttgacacatgtgcacgtttatgtcct |
40218796 |
T |
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