View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9014_low_2 (Length: 461)
Name: NF9014_low_2
Description: NF9014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9014_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 26 - 450
Target Start/End: Complemental strand, 36730861 - 36730433
Alignment:
| Q |
26 |
tatagcataaaccaaactccaaacacataaaccataacaacaa----tgccacaaaattcaaaacctaacatcacgggtaggtgtcatatgaacatatca |
121 |
Q |
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| T |
36730861 |
tatagcataaaccaaactccaaatacataaaccataacaacaaacaatgacacaaaattcaaaacctaacatcacgggtaggtgtcatatgaacatatca |
36730762 |
T |
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| Q |
122 |
taatgcaaggtaataacagtagtactacttttattttcctaaacaacatttatcttatatggtaaatgcaataatcataaaacttaaaaaggattaaaac |
221 |
Q |
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| T |
36730761 |
taatgcaaggtaataacagtagtactacttttattttcctaaacaacatttatcttatacggtaaatgcaataatcataaaacttaaaaaggattaaaac |
36730662 |
T |
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| Q |
222 |
aagtaacagggtaacaaactagaggttttgccaatccagcagaaaatgacgacccttcttccatatcaatcttatcaccacctttaattttccattcaaa |
321 |
Q |
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| T |
36730661 |
aagtaacagggtaacaaactagaggttttgccaatccagcagaaaatgacgacccttcttccatatcaatcttatcaccacctttaattttccattcaaa |
36730562 |
T |
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| Q |
322 |
acattgaatcaatccagcaattgtcaaatgtataaccgttaaagcaagtgatgaaccaggacaacccctcctaccaaatccaaatggaatatacctaaaa |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36730561 |
acattgaatcaatccagcaattgtcaaatgtataaccgttaaagcaagtgatgaaccaggacaacccctcctaccaaatccaaatggaatatacctaaaa |
36730462 |
T |
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| Q |
422 |
tcatcaccatccattttattcacaggttc |
450 |
Q |
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| T |
36730461 |
tcatcaccatccattttattcacatgttc |
36730433 |
T |
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