View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9015_low_27 (Length: 380)

Name: NF9015_low_27
Description: NF9015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9015_low_27
NF9015_low_27
[»] chr1 (62 HSPs)
chr1 (52-365)||(52873325-52873631)
chr1 (1-48)||(16024301-16024348)
chr1 (1-47)||(1762674-1762720)
chr1 (1-49)||(8760270-8760318)
chr1 (1-49)||(46593634-46593682)
chr1 (1-47)||(16023897-16023943)
chr1 (1-50)||(20305999-20306048)
chr1 (6-47)||(23476341-23476382)
chr1 (1-46)||(44323064-44323109)
chr1 (1-48)||(12127056-12127103)
chr1 (1-48)||(23476745-23476792)
chr1 (7-50)||(32047740-32047783)
chr1 (1-44)||(38000492-38000535)
chr1 (5-48)||(45053097-45053140)
chr1 (1-44)||(49643674-49643717)
chr1 (1-47)||(31704017-31704063)
chr1 (6-44)||(37585696-37585734)
chr1 (1-46)||(12481060-12481105)
chr1 (1-42)||(35612486-35612527)
chr1 (1-49)||(2064615-2064663)
chr1 (4-48)||(10831130-10831174)
chr1 (1-49)||(12481463-12481511)
chr1 (5-49)||(26707194-26707238)
chr1 (1-49)||(37304026-37304074)
chr1 (5-48)||(1763082-1763125)
chr1 (1-48)||(5536397-5536444)
chr1 (1-48)||(8762803-8762850)
chr1 (1-44)||(9006194-9006237)
chr1 (1-44)||(35612085-35612128)
chr1 (1-47)||(27547669-27547715)
chr1 (1-47)||(37467624-37467670)
chr1 (5-47)||(37576589-37576631)
chr1 (1-42)||(10831990-10832031)
chr1 (4-49)||(23598070-23598115)
chr1 (5-42)||(25995789-25995826)
chr1 (5-50)||(26723209-26723254)
chr1 (8-45)||(28884834-28884871)
chr1 (1-42)||(34966308-34966349)
chr1 (1-42)||(37304432-37304473)
chr1 (1-46)||(38127710-38127755)
chr1 (5-45)||(6797809-6797849)
chr1 (14-50)||(32048599-32048635)
chr1 (1-49)||(34967126-34967174)
chr1 (6-42)||(45843526-45843562)
chr1 (5-49)||(49644078-49644122)
chr1 (1-48)||(3089341-3089388)
chr1 (1-48)||(4696881-4696928)
chr1 (5-48)||(20306410-20306453)
chr1 (1-36)||(37284739-37284774)
chr1 (5-48)||(49140142-49140185)
chr1 (1-35)||(5537208-5537242)
chr1 (5-47)||(13109235-13109277)
chr1 (5-47)||(27548077-27548119)
chr1 (7-49)||(28884015-28884057)
chr1 (1-47)||(37576181-37576227)
chr1 (1-47)||(45843320-45843365)
chr1 (5-35)||(49140550-49140580)
chr1 (1-42)||(4330241-4330282)
chr1 (1-42)||(12127460-12127501)
chr1 (6-47)||(13183766-13183807)
chr1 (6-47)||(37285136-37285177)
chr1 (5-42)||(46289404-46289441)
[»] chr4 (67 HSPs)
chr4 (1-48)||(25269404-25269451)
chr4 (1-48)||(15477644-15477691)
chr4 (1-47)||(38339896-38339942)
chr4 (1-47)||(44991279-44991325)
chr4 (1-50)||(24898593-24898642)
chr4 (1-45)||(50769225-50769269)
chr4 (2-53)||(42855333-42855384)
chr4 (1-47)||(8592373-8592419)
chr4 (1-47)||(39448892-39448938)
chr4 (4-50)||(53995342-53995388)
chr4 (1-50)||(624083-624132)
chr4 (5-50)||(1433679-1433724)
chr4 (1-42)||(23756204-23756245)
chr4 (1-42)||(24898194-24898235)
chr4 (5-46)||(30683527-30683568)
chr4 (1-50)||(36122836-36122885)
chr4 (1-50)||(44991682-44991731)
chr4 (1-50)||(47602940-47602989)
chr4 (4-45)||(52557089-52557130)
chr4 (1-49)||(4513320-4513368)
chr4 (1-49)||(12817804-12817852)
chr4 (5-49)||(16037792-16037836)
chr4 (6-50)||(21763590-21763634)
chr4 (5-49)||(47603769-47603813)
chr4 (1-48)||(6505536-6505583)
chr4 (5-48)||(14985739-14985782)
chr4 (5-48)||(19088749-19088792)
chr4 (1-48)||(25181811-25181858)
chr4 (9-56)||(41878270-41878317)
chr4 (5-44)||(43734289-43734328)
chr4 (5-48)||(55022283-55022326)
chr4 (5-47)||(8398031-8398073)
chr4 (6-48)||(14985330-14985372)
chr4 (1-47)||(15478049-15478095)
chr4 (1-47)||(19508413-19508458)
chr4 (1-47)||(21763180-21763226)
chr4 (5-47)||(44957765-44957807)
chr4 (5-47)||(53751310-53751352)
chr4 (5-47)||(53994934-53994976)
chr4 (1-34)||(41752220-41752253)
chr4 (1-50)||(44125874-44125923)
chr4 (1-46)||(53750903-53750948)
chr4 (5-49)||(16038202-16038246)
chr4 (5-45)||(36122435-36122475)
chr4 (1-49)||(44957387-44957435)
chr4 (4-48)||(50768820-50768864)
chr4 (1-48)||(8591968-8592015)
chr4 (1-48)||(12818210-12818257)
chr4 (12-47)||(33091453-33091488)
chr4 (1-48)||(41751817-41751863)
chr4 (5-36)||(43734694-43734725)
chr4 (5-36)||(43734941-43734972)
chr4 (5-48)||(46849668-46849711)
chr4 (1-47)||(623679-623725)
chr4 (2-44)||(19088344-19088386)
chr4 (1-35)||(30683932-30683966)
chr4 (5-47)||(38339492-38339534)
chr4 (4-50)||(39448485-39448531)
chr4 (5-35)||(52557495-52557525)
chr4 (18-48)||(53259168-53259198)
chr4 (5-35)||(53259546-53259576)
chr4 (1-46)||(1433272-1433317)
chr4 (7-48)||(6712372-6712412)
chr4 (1-42)||(20888148-20888189)
chr4 (1-34)||(55022464-55022497)
chr4 (5-49)||(6711961-6712005)
chr4 (5-45)||(43566380-43566420)
[»] scaffold0115 (2 HSPs)
scaffold0115 (1-50)||(22557-22606)
scaffold0115 (5-48)||(21511-21554)
[»] chr2 (43 HSPs)
chr2 (1-50)||(15405753-15405802)
chr2 (5-50)||(13192985-13193030)
chr2 (1-49)||(7495978-7496026)
chr2 (1-47)||(8963221-8963267)
chr2 (1-47)||(34735747-34735793)
chr2 (1-50)||(7496383-7496432)
chr2 (1-46)||(12860381-12860426)
chr2 (5-49)||(13193396-13193440)
chr2 (1-49)||(17032591-17032639)
chr2 (1-49)||(19815702-19815750)
chr2 (5-49)||(24138066-24138110)
chr2 (5-49)||(24372375-24372419)
chr2 (1-49)||(29472646-29472694)
chr2 (5-49)||(33470331-33470375)
chr2 (1-45)||(38333084-38333128)
chr2 (5-48)||(10991850-10991893)
chr2 (1-48)||(19816108-19816155)
chr2 (5-48)||(24371966-24372009)
chr2 (1-44)||(30898705-30898748)
chr2 (5-47)||(15744855-15744897)
chr2 (5-47)||(29472242-29472284)
chr2 (1-47)||(36713588-36713634)
chr2 (1-47)||(41474486-41474532)
chr2 (5-50)||(8173882-8173927)
chr2 (1-42)||(8445193-8445234)
chr2 (1-42)||(15744462-15744503)
chr2 (9-46)||(26181701-26181738)
chr2 (1-42)||(41474087-41474128)
chr2 (5-49)||(8174293-8174337)
chr2 (1-49)||(16305023-16305070)
chr2 (1-49)||(17050927-17050975)
chr2 (5-44)||(2147888-2147927)
chr2 (1-48)||(19847722-19847769)
chr2 (1-35)||(16305429-16305463)
chr2 (5-47)||(24138915-24138957)
chr2 (1-47)||(38332704-38332750)
chr2 (5-42)||(7469171-7469208)
chr2 (1-50)||(8444819-8444868)
chr2 (4-48)||(13479447-13479491)
chr2 (6-42)||(17052463-17052499)
chr2 (4-48)||(33200027-33200071)
chr2 (4-48)||(34735342-34735386)
chr2 (4-48)||(38807200-38807244)
[»] chr6 (52 HSPs)
chr6 (1-49)||(6137377-6137425)
chr6 (1-42)||(31237751-31237792)
chr6 (1-42)||(31247121-31247162)
chr6 (1-45)||(6137781-6137825)
chr6 (3-47)||(17244664-17244708)
chr6 (1-49)||(21856553-21856601)
chr6 (1-45)||(32753577-32753621)
chr6 (1-48)||(9046490-9046537)
chr6 (1-48)||(34517271-34517318)
chr6 (1-47)||(2517406-2517452)
chr6 (5-47)||(9046086-9046128)
chr6 (1-47)||(31238150-31238196)
chr6 (1-47)||(31247520-31247566)
chr6 (1-47)||(34518096-34518142)
chr6 (1-47)||(35167490-35167536)
chr6 (1-42)||(2517007-2517048)
chr6 (1-50)||(14276396-14276445)
chr6 (5-50)||(18053361-18053406)
chr6 (1-50)||(32993419-32993468)
chr6 (4-48)||(978414-978458)
chr6 (5-49)||(6235919-6235963)
chr6 (5-49)||(7271037-7271081)
chr6 (1-45)||(15932960-15933004)
chr6 (1-49)||(18052954-18053002)
chr6 (1-45)||(25176665-25176709)
chr6 (5-49)||(35167863-35167907)
chr6 (1-48)||(3423169-3423216)
chr6 (5-44)||(5937816-5937855)
chr6 (1-48)||(15932729-15932776)
chr6 (5-48)||(34891052-34891094)
chr6 (1-47)||(6532192-6532238)
chr6 (4-49)||(7270360-7270405)
chr6 (3-47)||(6228730-6228774)
chr6 (1-49)||(21856959-21857007)
chr6 (1-49)||(34890642-34890690)
chr6 (1-49)||(34994378-34994426)
chr6 (10-45)||(6236334-6236369)
chr6 (1-48)||(7269950-7269997)
chr6 (5-48)||(7438803-7438846)
chr6 (1-48)||(25180252-25180299)
chr6 (1-48)||(26600356-26600403)
chr6 (6-45)||(32993017-32993056)
chr6 (5-47)||(32753177-32753219)
chr6 (1-42)||(5639577-5639618)
chr6 (1-42)||(5938217-5938258)
chr6 (1-42)||(15286350-15286391)
chr6 (1-34)||(24744341-24744374)
chr6 (6-47)||(24744729-24744770)
chr6 (6-47)||(26957370-26957411)
chr6 (5-42)||(29260536-29260573)
chr6 (5-45)||(5311234-5311274)
chr6 (5-37)||(21540385-21540417)
[»] chr3 (74 HSPs)
chr3 (1-48)||(39664183-39664230)
chr3 (3-49)||(49528147-49528193)
chr3 (1-50)||(47303420-47303469)
chr3 (1-50)||(51509116-51509165)
chr3 (1-49)||(11256101-11256149)
chr3 (4-48)||(18464863-18464907)
chr3 (4-48)||(27801896-27801940)
chr3 (3-47)||(44317621-44317665)
chr3 (1-48)||(1994168-1994215)
chr3 (1-48)||(1999327-1999374)
chr3 (1-48)||(4757897-4757944)
chr3 (5-48)||(4773242-4773285)
chr3 (1-48)||(21569149-21569196)
chr3 (1-47)||(10506352-10506398)
chr3 (1-47)||(54108306-54108352)
chr3 (5-50)||(11256511-11256556)
chr3 (3-44)||(13866023-13866064)
chr3 (1-46)||(16932010-16932055)
chr3 (1-42)||(22201621-22201662)
chr3 (1-42)||(39241363-39241404)
chr3 (5-50)||(42592192-42592237)
chr3 (1-42)||(47669264-47669305)
chr3 (1-49)||(4757492-4757540)
chr3 (1-49)||(5900421-5900469)
chr3 (5-49)||(10505946-10505990)
chr3 (1-49)||(15791508-15791556)
chr3 (1-49)||(28986545-28986593)
chr3 (6-50)||(47303016-47303060)
chr3 (5-49)||(53716701-53716745)
chr3 (1-48)||(5900827-5900874)
chr3 (1-48)||(26318586-26318633)
chr3 (7-58)||(30681018-30681069)
chr3 (5-44)||(44894148-44894187)
chr3 (1-48)||(54107901-54107948)
chr3 (4-42)||(8474253-8474291)
chr3 (1-47)||(12203551-12203597)
chr3 (1-35)||(12791580-12791614)
chr3 (5-47)||(22202024-22202066)
chr3 (5-47)||(24428975-24429017)
chr3 (1-47)||(26318182-26318228)
chr3 (1-35)||(27801501-27801535)
chr3 (5-47)||(28985509-28985551)
chr3 (7-49)||(30681827-30681869)
chr3 (5-47)||(39664592-39664634)
chr3 (1-47)||(42591784-42591830)
chr3 (1-47)||(45306832-45306878)
chr3 (5-47)||(45307100-45307142)
chr3 (1-47)||(47669663-47669709)
chr3 (5-50)||(4773650-4773695)
chr3 (5-42)||(29818182-29818219)
chr3 (5-50)||(53716292-53716336)
chr3 (5-45)||(1994576-1994616)
chr3 (1-49)||(18464454-18464502)
chr3 (5-45)||(54752571-54752611)
chr3 (1-48)||(7681528-7681575)
chr3 (7-42)||(21969634-21969669)
chr3 (7-42)||(21992070-21992105)
chr3 (1-48)||(32633469-32633516)
chr3 (1-35)||(15986247-15986281)
chr3 (1-47)||(15986638-15986684)
chr3 (11-49)||(16931604-16931642)
chr3 (1-35)||(21568758-21568792)
chr3 (1-35)||(44893752-44893786)
chr3 (1-34)||(7163463-7163496)
chr3 (1-34)||(12203955-12203988)
chr3 (4-49)||(13355742-13355787)
chr3 (7-48)||(22151844-22151885)
chr3 (17-50)||(22152267-22152300)
chr3 (5-50)||(24428564-24428609)
chr3 (4-49)||(46152613-46152658)
chr3 (6-35)||(54752175-54752204)
chr3 (1-49)||(19883644-19883691)
chr3 (10-42)||(41835339-41835371)
chr3 (14-46)||(42853342-42853374)
[»] scaffold0221 (2 HSPs)
scaffold0221 (1-43)||(8832-8874)
scaffold0221 (5-49)||(8427-8471)
[»] chr7 (49 HSPs)
chr7 (3-49)||(4155596-4155642)
chr7 (1-47)||(7578872-7578918)
chr7 (1-47)||(41891966-41892012)
chr7 (1-42)||(41192089-41192130)
chr7 (1-48)||(6356689-6356736)
chr7 (1-48)||(8416484-8416531)
chr7 (5-48)||(21391189-21391232)
chr7 (7-45)||(29276877-29276915)
chr7 (1-47)||(41453005-41453051)
chr7 (5-50)||(10526308-10526353)
chr7 (1-42)||(33716593-33716634)
chr7 (1-49)||(6356284-6356332)
chr7 (1-45)||(8542902-8542946)
chr7 (1-49)||(10526714-10526762)
chr7 (1-49)||(36423804-36423852)
chr7 (5-48)||(6356764-6356807)
chr7 (1-48)||(31075597-31075644)
chr7 (5-48)||(48626471-48626514)
chr7 (1-47)||(1114449-1114495)
chr7 (4-42)||(4931680-4931718)
chr7 (5-47)||(17749935-17749977)
chr7 (1-47)||(21391594-21391640)
chr7 (1-47)||(31638347-31638393)
chr7 (1-47)||(35146699-35146745)
chr7 (5-47)||(44332927-44332969)
chr7 (5-47)||(48626063-48626105)
chr7 (1-42)||(1114059-1114100)
chr7 (1-46)||(19681496-19681541)
chr7 (1-42)||(28286521-28286562)
chr7 (7-48)||(29277753-29277794)
chr7 (1-46)||(36673976-36674021)
chr7 (3-48)||(36674135-36674180)
chr7 (1-42)||(41453409-41453450)
chr7 (1-49)||(8936847-8936895)
chr7 (5-48)||(19681903-19681946)
chr7 (5-44)||(31637946-31637985)
chr7 (1-35)||(7579276-7579310)
chr7 (5-35)||(8417344-8417374)
chr7 (5-47)||(16867707-16867749)
chr7 (1-35)||(35147093-35147127)
chr7 (5-47)||(36282786-36282828)
chr7 (4-50)||(48095377-48095423)
chr7 (6-35)||(34037320-34037349)
chr7 (1-42)||(36283610-36283651)
chr7 (4-49)||(43704943-43704988)
chr7 (1-49)||(8542497-8542545)
chr7 (4-48)||(35918754-35918798)
chr7 (4-48)||(42287827-42287871)
chr7 (1-49)||(43247413-43247461)
[»] chr5 (25 HSPs)
chr5 (5-47)||(27185874-27185916)
chr5 (1-47)||(38958724-38958770)
chr5 (1-47)||(38959127-38959173)
chr5 (1-50)||(9989320-9989369)
chr5 (1-48)||(2182942-2182989)
chr5 (3-46)||(19184598-19184641)
chr5 (1-44)||(25183057-25183100)
chr5 (1-47)||(24040491-24040537)
chr5 (6-46)||(32288079-32288119)
chr5 (1-45)||(39325414-39325458)
chr5 (1-48)||(25567392-25567439)
chr5 (5-48)||(27186281-27186324)
chr5 (1-48)||(36440604-36440651)
chr5 (1-47)||(1140169-1140215)
chr5 (5-47)||(19128461-19128503)
chr5 (1-45)||(24040087-24040131)
chr5 (84-128)||(26522258-26522302)
chr5 (8-48)||(34264350-34264390)
chr5 (1-45)||(35569777-35569821)
chr5 (5-49)||(36440198-36440242)
chr5 (1-47)||(39325759-39325805)
chr5 (4-53)||(29961804-29961853)
chr5 (1-42)||(33817688-33817729)
chr5 (4-48)||(17339794-17339838)
chr5 (10-42)||(37424677-37424709)
[»] chr8 (43 HSPs)
chr8 (1-50)||(1646910-1646959)
chr8 (1-50)||(5434897-5434946)
chr8 (5-49)||(1646499-1646543)
chr8 (1-44)||(1651975-1652018)
chr8 (1-44)||(1740351-1740394)
chr8 (7-50)||(24666088-24666131)
chr8 (4-47)||(40659983-40660026)
chr8 (6-48)||(1870344-1870386)
chr8 (1-47)||(15048399-15048445)
chr8 (7-49)||(24652821-24652863)
chr8 (5-47)||(45077221-45077263)
chr8 (5-42)||(1432136-1432173)
chr8 (5-50)||(37569311-37569356)
chr8 (1-49)||(11920176-11920224)
chr8 (1-45)||(15048803-15048847)
chr8 (5-49)||(22763341-22763385)
chr8 (5-49)||(33296092-33296136)
chr8 (1-48)||(33819784-33819831)
chr8 (1-48)||(45277000-45277047)
chr8 (1-43)||(1739952-1739994)
chr8 (1-47)||(15871621-15871667)
chr8 (5-47)||(34470952-34470994)
chr8 (1-47)||(45276597-45276643)
chr8 (5-42)||(11174042-11174079)
chr8 (8-48)||(11920075-11920115)
chr8 (3-47)||(15741638-15741682)
chr8 (1-45)||(38588991-38589035)
chr8 (5-48)||(7535241-7535284)
chr8 (4-47)||(12643923-12643966)
chr8 (5-48)||(27473479-27473522)
chr8 (1-35)||(5435304-5435338)
chr8 (5-35)||(7949424-7949454)
chr8 (5-47)||(15872029-15872071)
chr8 (1-35)||(22762525-22762559)
chr8 (4-50)||(43633120-43633166)
chr8 (5-46)||(5152536-5152577)
chr8 (83-164)||(21141836-21141917)
chr8 (5-50)||(33295733-33295778)
chr8 (1-45)||(33820017-33820062)
chr8 (5-50)||(45077611-45077656)
chr8 (5-49)||(11707748-11707792)
chr8 (4-48)||(31988513-31988557)
chr8 (4-44)||(40660293-40660333)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-49)||(73165-73213)
scaffold0029 (1-48)||(72761-72808)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-47)||(15852-15898)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-49)||(20749-20797)
[»] scaffold0134 (2 HSPs)
scaffold0134 (1-49)||(14539-14587)
scaffold0134 (5-48)||(14134-14177)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-49)||(45754-45802)
[»] scaffold0182 (2 HSPs)
scaffold0182 (1-44)||(20112-20155)
scaffold0182 (1-42)||(19713-19754)
[»] scaffold0340 (2 HSPs)
scaffold0340 (1-47)||(18677-18723)
scaffold0340 (6-35)||(18285-18314)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-47)||(24566-24612)
scaffold0186 (6-50)||(24159-24203)
[»] scaffold0225 (1 HSPs)
scaffold0225 (3-49)||(9780-9826)
[»] scaffold0003 (2 HSPs)
scaffold0003 (13-47)||(113782-113816)
scaffold0003 (5-49)||(113391-113435)
[»] scaffold0526 (1 HSPs)
scaffold0526 (14-47)||(4030-4063)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-49)||(81856-81900)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-45)||(50478-50518)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-48)||(230871-230915)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 52 - 365
Target Start/End: Original strand, 52873325 - 52873631
Alignment:
Q  52 ttctaatcaaaattggtgatggaaaacttaagagggactaaaagccaaagaaattctttagtggaactaaaacaaaatgttaaaataattttaaggacta 151  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||    
T  52873325 ttctaaccaaaattggtgatggaaaacttaagagggactaaaagccaaagaaattttttagtggaactaaaacaaaatattaaaatagttttagggacta 52873424  T
Q  152 agaacatatttaaacnnnnnnnnnnctttctttcgcactgcagttatctggatcagttgctgtttgtgttcgtggtaactgcgactacacaactaaagct 251  Q
    ||||||||||||| |           ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52873425 agaacatatttaacccctt-------ttttttttgcactgcagttatctggatcagttgctgtttgtgttcgtggtaactgcgactacacaactaaagct 52873517  T
Q  252 acattatcacagtcagtgggtgctactgctgtgttgatgataaatgagagtaacttccccacccatacatcccattcatttcactcaaacgtatttcatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52873518 acattatcacagtcagtgggtgctactgctgtgttgatgataaatgagagtaacttccccacccatacatcccattcatttcactcaaacgtatttcatt 52873617  T
Q  352 tcgcatattatatt 365  Q
    ||||||||||||||    
T  52873618 tcgcatattatatt 52873631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16024301 - 16024348
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16024301 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 16024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1762720 - 1762674
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1762720 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 1762674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8760318 - 8760270
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8760318 atccgataccaattaaatagttagaggaccaaaaaggtaattaagccta 8760270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46593634 - 46593682
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46593634 atccgataccaattaaatagttagaggaccaaaaaagtaatttagccta 46593682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16023943 - 16023897
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16023943 atccgataccaattaaatagttagaggaccaaaaaagtaatttagcc 16023897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20306048 - 20305999
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  20306048 atccgataccaattaaatagttagaggaccaaaaaggtaattaaacctat 20305999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 23476382 - 23476341
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23476382 ataccaattaaatagttagaggaccaaaaaagtaattaagcc 23476341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44323064 - 44323109
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  44323064 atccgataccaattaaatagttagaggaccaaaaaggtaattaagc 44323109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12127103 - 12127056
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12127103 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcct 12127056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23476745 - 23476792
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  23476745 atccgataccaattaaatagttagaggaccaaaaatgtaatttagcct 23476792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 32047783 - 32047740
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  32047783 taccaattaaatagttagaggaccaaaaaggtaattaagcctat 32047740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38000535 - 38000492
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  38000535 atccgataccaattaaatagttagaggaccaaaaaggtaattaa 38000492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 45053097 - 45053140
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  45053097 gataccaattaaatagttagaggaccaaaaaagtaatttagcct 45053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49643717 - 49643674
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  49643717 atccgataccaattaaatagttagaggaccaaaaatgtaattaa 49643674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31704017 - 31704063
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  31704017 atccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 31704063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 37585734 - 37585696
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37585734 ataccaattaaatagttagaggaccaaaaaagtaattaa 37585696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12481105 - 12481060
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||    
T  12481105 atccgataccaactaaatagttagaggaccaaaaatgtaattaagc 12481060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35612486 - 35612527
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  35612486 atccgataccaattaaatagttagaggaccaaaaaggtaatt 35612527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2064615 - 2064663
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||    
T  2064615 atccgataccaattaaatagttagaggatcaaaaatgtaatttagccta 2064663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 10831174 - 10831130
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  10831174 cgataccaattaaatagttagaggaccaaaaaggtaatttagcct 10831130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12481463 - 12481511
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  12481463 atccgataccaactaaatagttagaggaccaaaaaggtaatttagccta 12481511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26707238 - 26707194
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  26707238 gataccaattaaatagttagaggaccaaaaaggtatttaagccta 26707194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37304074 - 37304026
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  37304074 atccgataccaattaaatggttagaggaccaaaaaggtaatttagccta 37304026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 1763082 - 1763125
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  1763082 gataccaattaaatagttagaggaccaaaaaggtaatttagcct 1763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5536444 - 5536397
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  5536444 atccgataccaattaaatagttagagggccaaaaatgtaatttagcct 5536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8762803 - 8762850
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  8762803 atccgataccaattaaatagttagatgaccaaaaatgtaatttagcct 8762850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9006237 - 9006194
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  9006237 atccgataccaattaaatagttagaggaccaaaaagataattaa 9006194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35612128 - 35612085
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  35612128 atccgataccaattaaatacttagaggaccaaaaaggtaattaa 35612085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27547715 - 27547669
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||    
T  27547715 atccgataccaattaaatagttaaaagaccaaaaaggtaattaagcc 27547669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37467624 - 37467670
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  37467624 atccgataccaattaaatagttagatgaccaaaaaggtaatttagcc 37467670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 37576589 - 37576631
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  37576589 gataccaactaaatagttagaggaccaaaaaggtaattaagcc 37576631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10831990 - 10832031
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  10831990 atccaataccagttaaatagttagaggaccaaaaaagtaatt 10832031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 23598115 - 23598070
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||    
T  23598115 cgataccaattaaatagttagaggaccaaaaagataatttagccta 23598070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 25995826 - 25995789
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  25995826 gataccaattaaatagttagaggaccaaaaaggtaatt 25995789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 26723209 - 26723254
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||    
T  26723209 gataccaattaaatagttagaggatcaaaaaggtaatttagcctat 26723254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 28884834 - 28884871
Alignment:
Q  8 accaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||||||||||||||||||||| |||||||    
T  28884834 accaattaaatagttagaggaccaaaaaagcaattaag 28884871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34966349 - 34966308
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  34966349 atccgataccaattaaatagttagaggtccaaaaaggtaatt 34966308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37304432 - 37304473
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  37304432 atccgataccaattaaatagttagagggccaaaaaaataatt 37304473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38127755 - 38127710
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||    
T  38127755 atccgaaaccaattaaatagttagagaaccaaaaaggtaattaagc 38127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6797849 - 6797809
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  6797849 gatatcaattaaatagttagagaaccaaaaaagtaattaag 6797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 32048599 - 32048635
Alignment:
Q  14 taaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||| ||||    
T  32048599 taaatagttagaggaccaaaaaagtaattaagtctat 32048635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34967126 - 34967174
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||| | |||||| |||||| ||||||    
T  34967126 atccgataccaattaaatagttagagaatcaaaaatgtaatttagccta 34967174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 45843526 - 45843562
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||||||| ||||||    
T  45843526 ataccaattaaatagttagaggaccaaaaatgtaatt 45843562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 49644078 - 49644122
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||    
T  49644078 gataccaattaaatagttagaggaccaaaaagataatttagccta 49644122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3089388 - 3089341
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  3089388 atccgatgccaattaaatagttagaggacccaaaaggtaatttagcct 3089341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4696928 - 4696881
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||| |||||  ||||| |||||    
T  4696928 atccgataccaattaaatagttagaggactaaaaagataatttagcct 4696881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 20306410 - 20306453
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||| | ||||||||||||    
T  20306410 gataccaattaactagttagaggaccaaagaggtaattaagcct 20306453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 37284774 - 37284739
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaa 36  Q
    |||||||| |||||||||||||||||||||||||||    
T  37284774 atccgatatcaattaaatagttagaggaccaaaaaa 37284739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 49140185 - 49140142
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||| ||||||||||||||||||||||  |||||||||||    
T  49140185 gataccaactaaatagttagaggaccaaaaagataattaagcct 49140142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5537208 - 5537242
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  5537208 atccgataccgattaaatagttagaggaccaaaaa 5537242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 13109235 - 13109277
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  13109235 gataccaattaaatagttagaggactaaaaaggtaatttagcc 13109277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 27548077 - 27548119
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  27548077 gataccaattaaatagttagaggacaaaaaaggtaatttagcc 27548119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 28884057 - 28884015
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||    
T  28884057 taccaattaaataattagaggaccaaaaaggtaattaaaccta 28884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37576227 - 37576181
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||| |||||||| ||||||||||| |||||| ||||    
T  37576227 atccgataccaatttaatagttaaaggaccaaaaaggtaatttagcc 37576181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45843365 - 45843320
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||    
T  45843365 atccgataccaattaaatagttagaggatc-aaaaggtaattaagcc 45843320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 49140550 - 49140580
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||    
T  49140550 gataccaattaaatagttagaggaccaaaaa 49140580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4330241 - 4330282
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||    
T  4330241 atccgataccaattaaataattagaggacaaaaaaggtaatt 4330282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12127460 - 12127501
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||  ||||| ||||||    
T  12127460 atccgataccaattaaatagttagaggataaaaaatgtaatt 12127501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 13183807 - 13183766
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  13183807 ataccaattaaatagttagaggatcaaaaaggtaatttagcc 13183766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 37285136 - 37285177
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||| ||||||||||| |||||| ||||    
T  37285136 ataccaattaaatagttaaaggaccaaaaatgtaatttagcc 37285177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 46289404 - 46289441
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  46289404 gataccaattaaatagttaaaggatcaaaaaagtaatt 46289441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25269404 - 25269451
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25269404 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 25269451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15477691 - 15477644
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15477691 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcct 15477644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38339896 - 38339942
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  38339896 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 38339942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44991325 - 44991279
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  44991325 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 44991279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24898593 - 24898642
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  24898593 atccaataccaattaaatagttagaggacaaaaaaagtaattaagcctat 24898642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50769225 - 50769269
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  50769225 atccgataccaattaaatagttagaggaccaaaaaggtaattaag 50769269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 42855384 - 42855333
Alignment:
Q  2 tccgataccaattaaatagttagaggaccaaaaaagtaattaagcctatgtt 53  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  42855384 tccgataccaactaaatagttagaggaccaaaaaggtaattacgcctatgtt 42855333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8592373 - 8592419
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  8592373 atccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 8592419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39448892 - 39448938
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  39448892 atccgataccaattaaatagttagaggaccaaaaaggtaatttagcc 39448938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 53995342 - 53995388
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||    
T  53995342 cgataccaattaaatagttagaggaccaaaaaggtaatttagcctat 53995388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 624083 - 624132
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||    
T  624083 atccgataccaactaaatagttagaggaccaaaaatgtaatttagcctat 624132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1433679 - 1433724
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  1433679 gataccaattaaatagttagaggaccaaaaatgtaatttagcctat 1433724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23756204 - 23756245
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  23756204 atccgataccaattaaatagttagaggaccaaaaatgtaatt 23756245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24898235 - 24898194
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  24898235 atccgataccaattaaatagttagaggaccaaaaatgtaatt 24898194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 30683568 - 30683527
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  30683568 gataccaattaaatagttagaggaccaaaaaggtaattaagc 30683527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36122836 - 36122885
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||||    
T  36122836 atccgataccaattaaatagttagaggatcaaaaatgtaatttagcctat 36122885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44991682 - 44991731
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  44991682 atccgataccaattaaatagttagaggaccaaaaagataatttagcctat 44991731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47602989 - 47602940
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  47602989 atccgataccaattaaatagttagaggaccaaaaagataatttagcctat 47602940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 52557130 - 52557089
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  52557130 cgataccaattaaatagttagaggaccaaaaaggtaattaag 52557089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4513320 - 4513368
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  4513320 atccgataccaactaaatagttagaggaccaaaaaggtaatttagccta 4513368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12817852 - 12817804
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  12817852 atccgataccaattaaatagttagagaaccaaaaaggtaatttagccta 12817804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 16037836 - 16037792
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  16037836 gataccaactaaatagttagaggaccaaaaatgtaattaagccta 16037792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 21763590 - 21763634
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  21763590 ataccaattaaatagttagaggaccaaaaatgtaatttagcctat 21763634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 47603769 - 47603813
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  47603769 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 47603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6505583 - 6505536
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  6505583 atccgatatcaattaaatagttagaggatcaaaaatgtaattaagcct 6505536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 14985739 - 14985782
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  14985739 gatacaaattaaatagttagaggaccaaaaaggtaattaagcct 14985782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 19088749 - 19088792
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  19088749 gataccaattaaatagttagaggaccaaaaaggtaatttagcct 19088792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25181858 - 25181811
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  25181858 atccgatacaaactaaatagttagaggaccaaaaatgtaattaagcct 25181811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 41878270 - 41878317
Alignment:
Q  9 ccaattaaatagttagaggaccaaaaaagtaattaagcctatgttcta 56  Q
    ||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  41878270 ccaattatatagttagaggaccaaaaaagtaatttagcctatattcta 41878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 43734328 - 43734289
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  43734328 gataccaattaaatagttagaggaccaaaaaggtaattaa 43734289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 55022326 - 55022283
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  55022326 gataccaattaaatagttagaggaccaaaaaggtaatttagcct 55022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 8398073 - 8398031
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  8398073 gataccaactaaatagttagaggaccaaaaaggtaattaagcc 8398031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 14985372 - 14985330
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  14985372 ataccaattaaatagttagaggaccaaaaaggtaatttagcct 14985330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15478049 - 15478095
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  15478049 atccgataccaattaaatagttagaagaccaaaaaggtaatttagcc 15478095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19508458 - 19508413
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||    
T  19508458 atccgataccaattaaatagttagaggatc-aaaaagtaattaagcc 19508413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21763226 - 21763180
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  21763226 atccgataccaattaaataattagaggaccaaaaagataattaagcc 21763180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 44957765 - 44957807
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  44957765 gatatcaattaaatagttagaggaccaaaaaggtaattaagcc 44957807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 53751310 - 53751352
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  53751310 gataccaattaaatagttagaggaccaaaaaggtaatttagcc 53751352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 53994976 - 53994934
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  53994976 gataccaactaaatagttagaggaccaaaaaggtaattaagcc 53994934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41752220 - 41752253
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  41752220 atccgataccaattaaatagttagaggaccaaaa 41752253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44125874 - 44125923
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||| |||||||||||||||||| ||||||||| |||||| |||||||    
T  44125874 atccgacaccaattaaatagttagatgaccaaaaatgtaatttagcctat 44125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 53750948 - 53750903
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||    
T  53750948 atccgataccaatttaatagttagaggactaaaaaggtaattaagc 53750903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 16038202 - 16038246
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||    
T  16038202 gataccaactaaatagttagaggaccaaaaaggtaatttagccta 16038246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 36122475 - 36122435
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  36122475 gataccaattaaatagtcagaggaccaaaaaggtaattaag 36122435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44957435 - 44957387
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||| |||||||||||||||||||||  ||||| ||||||    
T  44957435 atccgataccaataaaatagttagaggaccaaaaatataatttagccta 44957387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 50768864 - 50768820
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||    
T  50768864 cgataccaattaaatagttaaaggatcaaaaaggtaattaagcct 50768820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8592015 - 8591968
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||| ||||| |||||| |||||    
T  8592015 atccgataccaactaaatagttagaggactaaaaaggtaatttagcct 8591968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12818210 - 12818257
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||    
T  12818210 atccgataccaattaaataattagaggaccaaaaagataagtaagcct 12818257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 33091488 - 33091453
Alignment:
Q  12 attaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||| |||||||||||    
T  33091488 attaaatagttagaggaccaaaaaggtaattaagcc 33091453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41751863 - 41751817
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  41751863 atccgataccaattaaatagttaaagga-caaaaaggtaattaagcct 41751817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 43734694 - 43734725
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaa 36  Q
    ||||||||||||||||||||||||||||||||    
T  43734694 gataccaattaaatagttagaggaccaaaaaa 43734725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 43734941 - 43734972
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaa 36  Q
    ||||||||||||||||||||||||||||||||    
T  43734941 gataccaattaaatagttagaggaccaaaaaa 43734972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 46849711 - 46849668
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||    
T  46849711 gataccaactaaatagttagaggacgaaaaaggtaattaagcct 46849668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 623725 - 623679
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||| |||||||||||  ||||||||||    
T  623725 atccgataccaactaaatagttaaaggaccaaaaatataattaagcc 623679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 19088386 - 19088344
Alignment:
Q  2 tccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||| ||||||||||||||||||||||  |||||||    
T  19088386 tccgataccaactaaatagttagaggaccaaaaagataattaa 19088344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 30683932 - 30683966
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  30683932 atccgataccaattaaatatttagaggaccaaaaa 30683966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 38339534 - 38339492
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||    
T  38339534 gataccagttaaatagttagaggaccaaaaaggtaattcagcc 38339492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 39448531 - 39448485
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||| |  |||||||| ||||    
T  39448531 cgataccaattaaatagttagaggaccaaacagataattaagtctat 39448485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 52557495 - 52557525
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||    
T  52557495 gataccaattaaatagttagaggaccaaaaa 52557525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 48
Target Start/End: Complemental strand, 53259198 - 53259168
Alignment:
Q  18 tagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||    
T  53259198 tagttagaggaccaaaaaagtaattaagcct 53259168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 53259546 - 53259576
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||    
T  53259546 gataccaattaaatagttagaggaccaaaaa 53259576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1433317 - 1433272
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||| |||||||| |||||||||||||||||||||  |||||||||    
T  1433317 atccaataccaatgaaatagttagaggaccaaaaagataattaagc 1433272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 6712372 - 6712412
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  6712372 taccaattaaatagttaga-gaccaaaaaggtaattaagcct 6712412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20888189 - 20888148
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||| ||| |||| ||||||    
T  20888189 atccgataccaattaaatagttagagtacctaaaaggtaatt 20888148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 55022464 - 55022497
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  55022464 atccgataccaattaaatagttagaggacaaaaa 55022497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 6712005 - 6711961
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||| |||||||  ||||| ||||||    
T  6712005 gataccaattaaatagttagagggccaaaaatataatttagccta 6711961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 43566420 - 43566380
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||| |||||||||  ||||||||    
T  43566420 gataccaattaaatagttagaagaccaaaaagataattaag 43566380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22557 - 22606
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22557 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcctat 22606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 21554 - 21511
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  21554 gataccaattaaatagttagaggaccaaaaaggtaattaagcct 21511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15405802 - 15405753
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15405802 atccgataccaattaaatagttagaggaccaaaaatgtaattaagcctat 15405753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 13193030 - 13192985
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  13193030 gataccaattaaatagttagaggaccaaaaaagtaatttagcctat 13192985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7496026 - 7495978
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  7496026 atccgataccaactaaatagttagaggaccaaaaatgtaattaagccta 7495978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8963221 - 8963267
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  8963221 atccgataccaattaaatagttagagaaccaaaaaagtaatttagcc 8963267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34735747 - 34735793
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  34735747 atccgataccaattaaatagttagaggaccaaaaatgtaatttagcc 34735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7496383 - 7496432
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  7496383 atccgataccaactaaatagttagaggactaaaaatgtaattaagcctat 7496432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12860426 - 12860381
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||    
T  12860426 atccgataccaactaaatagttagaggaccaaaaatgtaattaagc 12860381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 13193396 - 13193440
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  13193396 gataccaattaaatagttagaggaccaaaaatataattaagccta 13193440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17032639 - 17032591
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  17032639 atccgataccaattaaatagttagaggaccaaaaagataatttagccta 17032591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19815750 - 19815702
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||||    
T  19815750 atccgataccaactaaatagttagaggaccaaaaatgtaattaaaccta 19815702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 24138110 - 24138066
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  24138110 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 24138066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 24372375 - 24372419
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  24372375 gataccaattaaatagttagaggaccaaaaatgtaatttagccta 24372419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29472646 - 29472694
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  29472646 atccaataccaattaaatagttagaggaccaaaaaggtatttaagccta 29472694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 33470331 - 33470375
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  33470331 gataccaactaaatagttagaggaccaaaaaggtaattaagccta 33470375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38333084 - 38333128
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  38333084 atccgataccaattaaatagttagaggaccaaaaagataattaag 38333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 10991893 - 10991850
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  10991893 gataccaattaaatagttagaggaccaaaaaggtaatttagcct 10991850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19816108 - 19816155
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||    
T  19816108 atccgataccaattaaatagtttgaggaccaaaaaggtaatttagcct 19816155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 24372009 - 24371966
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  24372009 gataccaactaaatagttagaggaccaaaaaggtaattaagcct 24371966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30898705 - 30898748
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    |||||||||||| |||||||||||||||||||||| ||||||||    
T  30898705 atccgataccaactaaatagttagaggaccaaaaatgtaattaa 30898748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 15744855 - 15744897
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  15744855 gataccaactaaatagttagaggaccaaaaatgtaattaagcc 15744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 29472284 - 29472242
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  29472284 gataccaattaaatagttagaggaccaaaaaggtaattgagcc 29472242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36713634 - 36713588
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||    
T  36713634 atccgataccaattaaatagttagaggatcaaaaaggtaatttagcc 36713588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41474486 - 41474532
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  41474486 atccgataccaattaaataattagaggaccaaaaagataattaagcc 41474532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 8173927 - 8173882
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||    
T  8173927 gatatcaattaaatagttagaggaccaaaaaggtaattaaacctat 8173882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8445193 - 8445234
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  8445193 atccgataccaattaaatagttagaggacaaaaaaggtaatt 8445234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15744503 - 15744462
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  15744503 atccgataccaactaaatagttagaggaccaaaaaggtaatt 15744462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 26181738 - 26181701
Alignment:
Q  9 ccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  26181738 ccaattaaatagttagaggaccaaaaaggtaattaagc 26181701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41474128 - 41474087
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  41474128 atccgataccaattaaatagttagaagaccaaaaatgtaatt 41474087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 8174293 - 8174337
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||    
T  8174293 gataccaattaaatagttagaggaccaaaaagataatttagccta 8174337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16305070 - 16305023
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||    
T  16305070 atccgataccaattaaatagttagagga-caaaaatgtaatttagccta 16305023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17050975 - 17050927
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| ||||||||||||||||||||||||||||||  ||||| ||||||    
T  17050975 atccaataccaattaaatagttagaggaccaaaaagataatttagccta 17050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 2147927 - 2147888
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  2147927 gatactaattaaatagttagaggaccaaaaaggtaattaa 2147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19847722 - 19847769
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||| ||||||| |||||||||||| ||||||||| ||||||||||||    
T  19847722 atccaataccaactaaatagttagatgaccaaaaatgtaattaagcct 19847769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 16305429 - 16305463
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  16305429 atccgataccaattaaatagttagaggatcaaaaa 16305463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 24138915 - 24138957
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||  |||||||| |||||||||||    
T  24138915 gataccaattaaatagttagaataccaaaaaggtaattaagcc 24138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38332750 - 38332704
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||| ||||||||||||||||||||| |||||||| |||||| ||||    
T  38332750 atccaataccaattaaatagttagagaaccaaaaatgtaatttagcc 38332704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 7469208 - 7469171
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  7469208 gataccaattaaatagttagagggccaaaaaggtaatt 7469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8444868 - 8444819
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||| ||| |||||||||||| ||||||||| |||||||| |||||    
T  8444868 atccgatatcaactaaatagttagaagaccaaaaaggtaattaaacctat 8444819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 13479447 - 13479491
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||| |||||||||| || | ||||||||    
T  13479447 cgataccaattaaatagttaaaggaccaaaagagcatttaagcct 13479491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 17052463 - 17052499
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||||| | ||||||    
T  17052463 ataccaattaaatagttagaggaccaaacatgtaatt 17052499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 33200071 - 33200027
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||| |||||||||| || | ||||||||    
T  33200071 cgataccaattaaatagttaaaggaccaaaatagcatttaagcct 33200027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 34735386 - 34735342
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||| ||||||||||||||||||||||  | |||||||||    
T  34735386 cgataccaactaaatagttagaggaccaaaaagattattaagcct 34735342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 38807200 - 38807244
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||| |||||||||| || | ||||||||    
T  38807200 cgataccaattaaatagttaaaggaccaaaagagcatttaagcct 38807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6137425 - 6137377
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6137425 atccgataccaattaaatagttagaggaccaaaaaggtaattaagccta 6137377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31237792 - 31237751
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31237792 atccgataccaattaaatagttagaggaccaaaaaagtaatt 31237751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31247162 - 31247121
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31247162 atccgataccaattaaatagttagaggaccaaaaaagtaatt 31247121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6137781 - 6137825
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  6137781 atccgataccaattaaatagttagaggaccaaaaaggtaattaag 6137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 17244708 - 17244664
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  17244708 ccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 17244664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21856601 - 21856553
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  21856601 atccgataccaactaaatagttagaggaccaaaaatgtaattaagccta 21856553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32753577 - 32753621
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  32753577 atccgataccaattaaatagttagaggaccaaaaaggtaattaag 32753621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9046490 - 9046537
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  9046490 atccaataccaattaaatagttagaggaccaaaaaggtaattaagcct 9046537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34517318 - 34517271
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  34517318 atccgacaccaattaaatagttagaggaccaaaaaagtaatttagcct 34517271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2517406 - 2517452
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  2517406 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 2517452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 9046128 - 9046086
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  9046128 gataccaattaaatagttagaggaccaaaaaagtaatttagcc 9046086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31238150 - 31238196
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  31238150 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 31238196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31247520 - 31247566
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  31247520 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 31247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34518096 - 34518142
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  34518096 atccgataccaattaaatagttagaggaccaaaaaggtaatttagcc 34518142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35167536 - 35167490
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  35167536 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 35167490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2517048 - 2517007
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  2517048 atccgataccaattaaatagttagaggaccaaaaatgtaatt 2517007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14276445 - 14276396
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  14276445 atccgataccaattaaataggtagaggaccaaaaaggtaattaaacctat 14276396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 18053361 - 18053406
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||    
T  18053361 gataccaattaaatagttagaggaccaaaaaggtaactaagcctat 18053406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32993419 - 32993468
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  32993419 atccgataccaattaaatagttagaggaccaaaaatataatttagcctat 32993468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 978458 - 978414
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||    
T  978458 cgataccaactaaatagttagaggaccaaaaatgtaattaagcct 978414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 6235963 - 6235919
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  6235963 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 6235919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 7271037 - 7271081
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| | |||||||||||    
T  7271037 gataccaattaaatagttagaggaccaaaaaggcaattaagccta 7271081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15932960 - 15933004
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  15932960 atccgataccaactaaatagttagaggaccaaaaatgtaattaag 15933004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18053002 - 18052954
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  18053002 atccgataccaattaaatagttaaaggatcaaaaaagtaatttagccta 18052954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25176709 - 25176665
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  25176709 atccgataccaactaaatagttagaggaccaaaaatgtaattaag 25176665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 35167863 - 35167907
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  35167863 gataccaattaaatagttagaggaccaaaaatgtaatttagccta 35167907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3423216 - 3423169
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||    
T  3423216 atccgataccaattaaatagttagagaaccaaaatggtaattaagcct 3423169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 5937855 - 5937816
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  5937855 gataccaattaaatagttagaggaccaaaaaggtaattaa 5937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15932776 - 15932729
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||    
T  15932776 atccgataccaactaaatagttagaggaccaaaaaggtaatttagcct 15932729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 34891052 - 34891094
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  34891052 gataccaattaaatagttagaggacc-aaaaagtaattaagcct 34891094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6532238 - 6532192
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  6532238 atccgatacaaattaaatagttagaggacaaaaaaggtaattaagcc 6532192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 7270360 - 7270405
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||    
T  7270360 cgataccaattaaatagttaaaggaccaaaaagataattaagccta 7270405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 6228774 - 6228730
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||    
T  6228774 ccgataccaattaaataattagaggactaaaaaggtaattaagcc 6228730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21856959 - 21857007
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||| ||||||||||||||| |||||| ||||||    
T  21856959 atccgataccaactaaatacttagaggaccaaaaaggtaatttagccta 21857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34890690 - 34890642
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| ||||||||||||||||||||||| |||||| |||||| ||||||    
T  34890690 atccaataccaattaaatagttagaggaacaaaaaggtaatttagccta 34890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34994426 - 34994378
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| |||||||||||||||||| ||||||||||| |||||||| ||||    
T  34994426 atccaataccaattaaatagttaaaggaccaaaaaggtaattaaaccta 34994378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 6236334 - 6236369
Alignment:
Q  10 caattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6236334 caattaaatagttaggggaccaaaaaagtaattaag 6236369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7269997 - 7269950
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||| |||||||||||||||||||||||  |||||||||||| |||||    
T  7269997 atccaataccaattaaatagttagaggattaaaaaagtaatttagcct 7269950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 7438846 - 7438803
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||  ||||| |||||    
T  7438846 gataccaattaaatagttagaggaccaaaaagataatttagcct 7438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25180252 - 25180299
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||| ||| |||||| |||||    
T  25180252 atccgataccaactaaatagttagaggaccagaaaggtaatttagcct 25180299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26600403 - 26600356
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||| ||||||||||||||||||||  ||||| |||||    
T  26600403 atccgataccaatttaatagttagaggaccaaaaagataatttagcct 26600356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 32993056 - 32993017
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  32993056 ataccaattaaatagttagaggaccaagaaggtaattaag 32993017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 32753219 - 32753177
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||    
T  32753219 gatactaattaaatagttagaggaccaaaaatgtaatttagcc 32753177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5639577 - 5639618
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||| || |||||| ||||||    
T  5639577 atccgataccaattaaatagttagaagatcaaaaatgtaatt 5639618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5938217 - 5938258
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||    
T  5938217 atccgataccaattaaataattagatgaccaaaaaggtaatt 5938258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15286391 - 15286350
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||| ||||||||||||||||||||| |||||| ||||||    
T  15286391 atccgacaccaattaaatagttagaggatcaaaaaggtaatt 15286350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24744374 - 24744341
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  24744374 atccgataccaattaaatagttagaggacaaaaa 24744341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 24744729 - 24744770
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||| ||||||||||||||||||||||  ||||||||||    
T  24744729 ataccaactaaatagttagaggaccaaaaagataattaagcc 24744770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 26957370 - 26957411
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||| |||||||||  ||||||||||    
T  26957370 ataccaattaaatagttagatgaccaaaaagataattaagcc 26957411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 29260573 - 29260536
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  29260573 gataccaattaaatagttagaggaccagaaaggtaatt 29260536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 5311234 - 5311274
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||| |||||||||||||||||||||| |||| ||||    
T  5311234 gataccaactaaatagttagaggaccaaaaaggtaactaag 5311274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 21540385 - 21540417
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaag 37  Q
    ||||||||||||||||||| |||||||||||||    
T  21540385 gataccaattaaatagttaaaggaccaaaaaag 21540417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39664230 - 39664183
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39664230 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcct 39664183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 49528193 - 49528147
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  49528193 ccgataccaattaaatagttagaggaccaaaaaggtaattaagccta 49528147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47303420 - 47303469
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  47303420 atccgataccaattaaatagttagaggaccaaaaatgtaattaaacctat 47303469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51509165 - 51509116
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  51509165 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcctat 51509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11256149 - 11256101
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  11256149 atccgataccaattaaatagttagaggactaaaaaggtaattaagccta 11256101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 18464863 - 18464907
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  18464863 cgataccaattaaatagttagaggaccaaaaaggtaattaagcct 18464907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 27801896 - 27801940
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  27801896 cgataccaattaaatagttagaggaccaaaaaggtaattaagcct 27801940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 44317621 - 44317665
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  44317621 ccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 44317665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1994215 - 1994168
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1994215 atccgataccaactaaatagttagaggaccaaaaatgtaattaagcct 1994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1999374 - 1999327
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1999374 atccgataccaactaaatagttagaggaccaaaaatgtaattaagcct 1999327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4757897 - 4757944
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  4757897 atccgataccaactaaatagttagaggaccaaaaatgtaattaagcct 4757944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 4773285 - 4773242
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  4773285 gataccaattaaatagttagaggaccaaaaaggtaattaagcct 4773242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21569149 - 21569196
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  21569149 atccgataccaattaaatagttagaggaccaaaaaggtaatcaagcct 21569196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10506352 - 10506398
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10506352 atccgataccaattaaatagttagaggaccaaaaaggtaatttagcc 10506398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54108306 - 54108352
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  54108306 atccgataccaattaaatagttagaggaccaaaaaggtaatttagcc 54108352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 11256511 - 11256556
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  11256511 gataccaattaaatagttagaggaccaaaaaggtaattacgcctat 11256556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 13866064 - 13866023
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13866064 ccgataccaattaaatagttagaggaccaaaaaggtaattaa 13866023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16932010 - 16932055
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16932010 atccgataccaattaaaaagttagaggaccaaaaaggtaattaagc 16932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22201662 - 22201621
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  22201662 atccgataccaattaaatagttagaggaccaaaaatgtaatt 22201621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39241404 - 39241363
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  39241404 atccgataccaattaaatagttagaggaccaaaaatgtaatt 39241363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 42592192 - 42592237
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||    
T  42592192 gataccaactaaatagttagaggaccaaaaatgtaattaagcctat 42592237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47669305 - 47669264
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  47669305 atccgataccaattaaatagttagaggaccaaaaaggtaatt 47669264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4757540 - 4757492
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  4757540 atccgattccaactaaatagttagaggaccaaaaatgtaattaagccta 4757492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5900469 - 5900421
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  5900469 atccgataccaactaaatagttagatgaccaaaaatgtaattaagccta 5900421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 10505990 - 10505946
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  10505990 gataccaattaaatagttagaggaccaaaaaggtaattaaaccta 10505946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15791508 - 15791556
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  15791508 atccgataccaattaaatagttagaggaccaaaaatataatttagccta 15791556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28986545 - 28986593
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  28986545 atccgataccaattaaataattagaggaccaaaaaggtaatttagccta 28986593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 47303060 - 47303016
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  47303060 ataccaattaaatagttagatgatcaaaaaagtaattaagcctat 47303016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 53716701 - 53716745
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  53716701 gataccaattaaatagttagatgaccaaaaaggtaattaagccta 53716745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5900827 - 5900874
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||    
T  5900827 atccgataccaactaaatagttagaggaccaaaaatgtaatttagcct 5900874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26318586 - 26318633
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  26318586 atccgataccaattaaatagttagatgaccaaaaaggtaatttagcct 26318633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 30681069 - 30681018
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagcctatgttctaat 58  Q
    ||||||||||||||||||| ||||||||| |||||||||||| | |||||||    
T  30681069 taccaattaaatagttagatgaccaaaaatgtaattaagcctcttttctaat 30681018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 44894148 - 44894187
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  44894148 gataccaattaaatagttagaggaccaaaaaggtaattaa 44894187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 54107948 - 54107901
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  54107948 atccgataccaattaaatagttagatgaccaaaaaggtaataaagcct 54107901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 8474253 - 8474291
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  8474253 cgataccaattaaatagttagaggaccaaaaaggtaatt 8474291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12203597 - 12203551
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||    
T  12203597 atccgataccaattaaatagttagaggataaaaaaggtaattaagcc 12203551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12791580 - 12791614
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12791580 atccgataccaattaaatagttagaggaccaaaaa 12791614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 22202024 - 22202066
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  22202024 gataccaattaaatagttagaggaccaaaaagataattaagcc 22202066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 24428975 - 24429017
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  24428975 gataccaattaaatagttagatgaccaaaaaggtaattaagcc 24429017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26318228 - 26318182
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||| ||||| |||||||||||    
T  26318228 atccgataccaactaaatagttagaggactaaaaaggtaattaagcc 26318182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 27801535 - 27801501
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  27801535 atccgataccaattaaatagttagaggaccaaaaa 27801501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 28985551 - 28985509
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  28985551 gataccaattaaatagttagaggaccaaaagggtaattaagcc 28985509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 30681827 - 30681869
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  30681827 taccaattaaatagttagaggaccaaaaagataattaagccta 30681869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 39664592 - 39664634
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  39664592 gataccaattaaatagttagaggaccaaaaatgtaatttagcc 39664634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42591830 - 42591784
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||    
T  42591830 atccgataccgattaaatagttagaggaccaaaaaggtaatttagcc 42591784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45306878 - 45306832
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||    
T  45306878 atccgataccaattaaatagttagaggatcaaaaaggtaatttagcc 45306832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 45307100 - 45307142
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  45307100 gataccaactaaatagttagaggaccaaaaaggtaattaagcc 45307142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47669663 - 47669709
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  47669663 atccgataccaaataaatagttagaggaccaaaaagataattaagcc 47669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 4773650 - 4773695
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||||||||||  | |||||||||||    
T  4773650 gataccaattaaatagttagaggaccaaaaagatgattaagcctat 4773695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 29818219 - 29818182
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  29818219 gataccaattaaatagttagaggaccaaaaaggtaatt 29818182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 53716336 - 53716292
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  53716336 gataccaattaaatagttagagga-caaaaaagtaatttagcctat 53716292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1994576 - 1994616
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  1994576 gataccaactaaatagttagaggaccaaaaatgtaattaag 1994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18464502 - 18464454
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| ||||||||||||||||||||||| |||||| |||||| ||||||    
T  18464502 atccaataccaattaaatagttagaggagcaaaaatgtaatttagccta 18464454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 54752571 - 54752611
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  54752571 gataccaactaaatagttagaggaccaaaaaggtaattaag 54752611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7681528 - 7681575
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||| ||||||||||||||  |||||| |||||    
T  7681528 atccgataccaattaaataattagaggaccaaaagtgtaatttagcct 7681575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 21969669 - 21969634
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21969669 taccaattaaatagttagaggaccaaaaaggtaatt 21969634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 21992105 - 21992070
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21992105 taccaattaaatagttagaggaccaaaaaggtaatt 21992070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32633469 - 32633516
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||| ||||||||||||||||||||||||||  ||||| |||||    
T  32633469 atccgataacaattaaatagttagaggaccaaaaagataatttagcct 32633516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 15986281 - 15986247
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  15986281 atccgataccaattaaatagttagaggatcaaaaa 15986247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15986638 - 15986684
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||| |||||||||||||||  ||||||||||    
T  15986638 atccgataccaactaaataattagaggaccaaaaagttaattaagcc 15986684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 16931642 - 16931604
Alignment:
Q  11 aattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  16931642 aattaaatagttagaggaccaaaaatgtaatttagccta 16931604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21568792 - 21568758
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  21568792 atccgataccaattaaatagttagaggatcaaaaa 21568758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 44893786 - 44893752
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  44893786 atccgataccaattaaatagttagagaaccaaaaa 44893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7163496 - 7163463
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaa 34  Q
    |||| |||||||||||||||||||||||||||||    
T  7163496 atccaataccaattaaatagttagaggaccaaaa 7163463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12203955 - 12203988
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  12203955 atccgataccaattaaatagttaggggaccaaaa 12203988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 13355742 - 13355787
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||| |||||||||| || | |||||||||    
T  13355742 cgataccaattaaatagttaaaggaccaaaagagcatttaagccta 13355787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 22151885 - 22151844
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  22151885 taccaattaaatagttataggaccaaaaatgtaatttagcct 22151844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 22152267 - 22152300
Alignment:
Q  17 atagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||| ||||||||||||||    
T  22152267 atagttagaggaccaaaaaggtaattaagcctat 22152300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 24428609 - 24428564
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||||| ||||||||||||||||||||  ||||| |||||||    
T  24428609 gataccaattgaatagttagaggaccaaaaagataatttagcctat 24428564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 46152658 - 46152613
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| ||||||||||||||||||||||||| | |||||| ||||||    
T  46152658 cgatgccaattaaatagttagaggaccaaagatgtaatttagccta 46152613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 54752204 - 54752175
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  54752204 ataccaattaaatagttagaggaccaaaaa 54752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19883644 - 19883691
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| ||||    
T  19883644 atccgataccaattaaatagttagagga-taaaaaggtaattaacccta 19883691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 41835339 - 41835371
Alignment:
Q  10 caattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||| ||||||    
T  41835339 caattaaatagttagaggaccaaaaaggtaatt 41835371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 42853342 - 42853374
Alignment:
Q  14 taaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||||||||||||||||||| ||||||||||    
T  42853342 taaatagttagaggaccaaaaatgtaattaagc 42853374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8832 - 8874
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8832 atccgataccaattaaatagttagaggaccaaaaaagtaatta 8874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 8471 - 8427
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  8471 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 8427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 4155642 - 4155596
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4155642 ccgataccaattaaatagttagaggaccaaaaaggtaattaagccta 4155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7578918 - 7578872
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  7578918 atccgataccaactaaatagttagaggaccaaaaaagtaattaagcc 7578872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41892012 - 41891966
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41892012 atccgataccaattaaatagttagaggaccaaaaaagtaatttagcc 41891966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41192089 - 41192130
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41192089 atccgataccaattaaatagttagaggaccaaaaaagtaatt 41192130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6356689 - 6356736
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  6356689 atccgataccaattaaatagttataggaccaaaaaggtaattaagcct 6356736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8416531 - 8416484
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  8416531 atccgataccaattaaatagttagaggaccaaaaaggtaatttagcct 8416484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 21391232 - 21391189
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  21391232 gataccaattaaatagttagaggaccaaaaaggtaattaagcct 21391189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 29276915 - 29276877
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29276915 taccaattaaatagttagaggaccaaaaaagtaattaag 29276877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41453051 - 41453005
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  41453051 atccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 41453005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 10526353 - 10526308
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  10526353 gataccaattaaatagttagaggaccaaaaaggtaatttagcctat 10526308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33716634 - 33716593
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  33716634 atccgataccaattaaatagttagaggaccaaaaaactaatt 33716593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6356332 - 6356284
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6356332 atccgataccaattaaatagttagatgaccaaaaaggtaattaaaccta 6356284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8542902 - 8542946
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  8542902 atccgataccaactaaatagttagaggaccaaaaatgtaattaag 8542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10526714 - 10526762
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  10526714 atccgataccaattaaatagttagaggacaaaaaagataattaagccta 10526762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36423804 - 36423852
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  36423804 atccaataccaattaaatagttagaggaccaaaaaggtaatttagccta 36423852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 6356807 - 6356764
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  6356807 gataccaattaaatagttagaggaccaaaaaggtaatttagcct 6356764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31075597 - 31075644
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||    
T  31075597 atccaataccaattaaatagttagaggaccaaaaagataattaagcct 31075644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 48626471 - 48626514
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  48626471 gataccaattaaatagttagaggaccaaaaaggtaatttagcct 48626514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1114449 - 1114495
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  1114449 atccgataacaactaaatagttagaggaccaaaaatgtaattaagcc 1114495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 4931680 - 4931718
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  4931680 cgataccaattaaatagttagaggaccaaaaatgtaatt 4931718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 17749977 - 17749935
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  17749977 gatatcaattaaatagttagaggaccaaaaaggtaattaagcc 17749935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21391594 - 21391640
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  21391594 atccgataccaattaaatagttagatgaccaaaaatgtaatttagcc 21391640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31638347 - 31638393
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||    
T  31638347 atccgataccaattaaatagttagagaaccaaaaaggtaatttagcc 31638393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35146745 - 35146699
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||    
T  35146745 atccgatactaactaaatagttagaggaccaaaaaggtaattaagcc 35146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 44332927 - 44332969
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  44332927 gataccaattaaatagttagaggaccaaaaatgtaatttagcc 44332969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 48626105 - 48626063
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  48626105 gataccaactaaatagttagaggaccaaaaaggtaattaagcc 48626063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1114100 - 1114059
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  1114100 atccgataccaactaaatagttagaggaccaaaaaggtaatt 1114059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19681541 - 19681496
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||    
T  19681541 atccaataccaactaaatagttagaggaccaaaaaggtaattaagc 19681496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28286521 - 28286562
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  28286521 atccgataccaattaaaaagttagaggaccaaaaatgtaatt 28286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 29277753 - 29277794
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  29277753 taccaaataaatagttagaggaccaaaaaggtaattaagcct 29277794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36674021 - 36673976
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||    
T  36674021 atccgataccaactaaatagttagaggaccataaaggtaattaagc 36673976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 36674135 - 36674180
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||    
T  36674135 ccgataccaattaaatagtcagaggaccaaaaaggtaatttagcct 36674180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41453409 - 41453450
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  41453409 atccgataccaactaaatagttagaggaccaaaaaggtaatt 41453450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8936895 - 8936847
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||||||    
T  8936895 atccgataccaactaaatagttagaggactaaaaagataattaagccta 8936847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 19681903 - 19681946
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||    
T  19681903 gataccaattaaatagtcagaggaccaaaaaggtaatttagcct 19681946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 31637985 - 31637946
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  31637985 gataccaattaaatagttagaggactaaaaaggtaattaa 31637946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7579276 - 7579310
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||||||||||||| |||||||||    
T  7579276 atccgataccaattaaatagttagaagaccaaaaa 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 8417344 - 8417374
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||    
T  8417344 gataccaattaaatagttagaggaccaaaaa 8417374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 16867749 - 16867707
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  16867749 gataccaattatatagttagaggaccaaaaaggtaatttagcc 16867707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35147093 - 35147127
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    |||| ||||||||||||||||||||||||||||||    
T  35147093 atccaataccaattaaatagttagaggaccaaaaa 35147127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 36282828 - 36282786
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  36282828 gataccaattaaatagttagaggactaaaaatgtaatttagcc 36282786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 48095377 - 48095423
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||||    
T  48095377 cgataccaattaaatagttaagggaccaaaaaagcatttaagcctat 48095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 34037320 - 34037349
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  34037320 ataccaattaaatagttagaggaccaaaaa 34037349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36283610 - 36283651
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||| || ||||| ||||||    
T  36283610 atccgataccaattaaatagttagagaacaaaaaatgtaatt 36283651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 43704988 - 43704943
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||  |||||||||||| | |||||||||    
T  43704988 cgataccaattaaatagttaagggaccaaaaaagcatttaagccta 43704943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8542545 - 8542497
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||| ||| ||||| |||||| ||||||    
T  8542545 atccgataccaactaaatagttagaagacgaaaaaggtaatttagccta 8542497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 35918754 - 35918798
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||| |||||||||||||| ||||||||||||| | ||||||||    
T  35918754 cgatatcaattaaatagttaaaggaccaaaaaagcatttaagcct 35918798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 42287827 - 42287871
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||  ||||||||| |||| ||||||||    
T  42287827 cgataccaattaaatagttaagggaccaaaagagtatttaagcct 42287871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43247461 - 43247413
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| |||||||||||||||||||| |||||  ||||| ||||||    
T  43247461 atccgatatcaattaaatagttagaggacaaaaaatataattcagccta 43247413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 27185916 - 27185874
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27185916 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 27185874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38958770 - 38958724
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  38958770 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 38958724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38959127 - 38959173
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  38959127 atccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 38959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9989369 - 9989320
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9989369 atccgataccaattaaatagttagatgaccaaaaaagtaatttagcctat 9989320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2182989 - 2182942
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  2182989 atccgataccaattaaatagttagaggaccaaaaaattaatttagcct 2182942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 19184641 - 19184598
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  19184641 ccgataccaattaaatagttagaggaccaaaaaggtaattaagc 19184598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25183057 - 25183100
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  25183057 atccgataccaattaaatagttagaggaccaaaaaggtaattaa 25183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24040491 - 24040537
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  24040491 atccgatactaattaaatagttagaggaccaaaaaagtaatttagcc 24040537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 32288119 - 32288079
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  32288119 ataccaattaaatagttagaggaccaaaaaggtaattaagc 32288079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39325458 - 39325414
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  39325458 atccgataccaattaaatagtcagaggaccaaaaaggtaattaag 39325414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25567392 - 25567439
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  25567392 atccgataccaattaaatagttaaaggactaaaaaagtaatttagcct 25567439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 27186281 - 27186324
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  27186281 gataccaattaaatagttagaggaccaaaaatgtaatttagcct 27186324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36440604 - 36440651
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||    
T  36440604 atccgataccaattaaatagttagaggaccaaaaagataatttagcct 36440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1140169 - 1140215
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||    
T  1140169 atccgataccaactaaatagttagaggaccaaaaaggcaattaagcc 1140215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 19128461 - 19128503
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  19128461 gatactaattaaatagttagaggaccaaaaaggtaattaagcc 19128503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24040131 - 24040087
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||    
T  24040131 atccgataccaattaaatagttaaaggaccaaaaagataattaag 24040087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 26522258 - 26522302
Alignment:
Q  84 agggactaaaagccaaagaaattctttagtggaactaaaacaaaa 128  Q
    |||||||||||||  |||||||| |||||||||||||||||||||    
T  26522258 agggactaaaagctgaagaaattttttagtggaactaaaacaaaa 26522302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 34264390 - 34264350
Alignment:
Q  8 accaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  34264390 accaattaaatagttagaggatcaaaaaggtaattaagcct 34264350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35569821 - 35569777
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||    
T  35569821 atccgataccaactaaatagttagaagaccaaaaaggtaattaag 35569777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 36440242 - 36440198
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||    
T  36440242 gataccaactaaatagttagaggatcaaaaaggtaattaagccta 36440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39325759 - 39325805
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| ||||    
T  39325759 atccgataccaattaaataattagaggactaaaaatgtaatttagcc 39325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 29961853 - 29961804
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcctatgtt 53  Q
    ||||||||||||||||||||  ||||||||| || | |||||||||||||    
T  29961853 cgataccaattaaatagttaagggaccaaaagagcatttaagcctatgtt 29961804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33817688 - 33817729
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  33817688 atccgataccaattaaatagttagagaatcaaaaaggtaatt 33817729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 17339838 - 17339794
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||    
T  17339838 cgataccaattaaatagttaagggaccaaaaaagcatttaagcct 17339794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 37424677 - 37424709
Alignment:
Q  10 caattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||||||||||||||||||||||||| ||||||    
T  37424677 caattaaatagttagaggaccaaaaaggtaatt 37424709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1646910 - 1646959
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  1646910 atccgataccaattaaatagttagaggacgaaaaaggtaattaagcctat 1646959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5434946 - 5434897
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  5434946 atccgataccaattaaatagttagaggaccaaaaaggtaattaagactat 5434897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 1646543 - 1646499
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  1646543 gataccaattaaatagttagaggaccaaaaaggtaattaagccta 1646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1651975 - 1652018
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  1651975 atccgataccaattaaatagttagaggaccaaaaaggtaattaa 1652018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1740351 - 1740394
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  1740351 atccgataccaattaaatagttagaggaccaaaaaggtaattaa 1740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 24666088 - 24666131
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  24666088 taccaattaaatagttagaggaccaaaaaggtaattaagcctat 24666131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 40660026 - 40659983
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  40660026 cgataccaattaaatagttagaggaccaaaaaagtaatttagcc 40659983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 1870344 - 1870386
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  1870344 ataccaattaaatagttagaggaccaaaaatgtaattaagcct 1870386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15048445 - 15048399
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15048445 atccgataccaattaaatagttagaggaccaaaaaggtaatttagcc 15048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 24652863 - 24652821
Alignment:
Q  7 taccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  24652863 taccaattaaatagttagaggaccaaaaatgtaattaagccta 24652821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 45077263 - 45077221
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  45077263 gataccaattaaatagttagaggaccaaaaaggtaattaagcc 45077221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 1432173 - 1432136
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1432173 gataccaattaaatagttagaggaccaaaaaagtaatt 1432136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 37569356 - 37569311
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  37569356 gataccaattaaatagttagaggaccaaaaaggtaatcaagcctat 37569311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11920176 - 11920224
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  11920176 atccgataccaattaaatagttagatgaccaaaaaggtaatttagccta 11920224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15048803 - 15048847
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  15048803 atccgataccaactaaatagttagaggaccaaaaaggtaattaag 15048847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 22763341 - 22763385
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  22763341 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 22763385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 33296092 - 33296136
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  33296092 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 33296136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33819831 - 33819784
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  33819831 atccgataccaattaaataattagaggaccaaaaaggtaatttagcct 33819784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45277000 - 45277047
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||    
T  45277000 atccgataccaattaaatagttagaggaccaaaaagataatttagcct 45277047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1739994 - 1739952
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatta 43  Q
    |||||||||| |||||||||||||||||||||||| |||||||    
T  1739994 atccgataccgattaaatagttagaggaccaaaaaggtaatta 1739952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15871667 - 15871621
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||||    
T  15871667 atccgatatcaattaaatagttaaaggaccaaaaaggtaattaagcc 15871621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 34470952 - 34470994
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  34470952 gataccaactaaatagttagaggaccaaaaaggtaattaagcc 34470994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45276643 - 45276597
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  45276643 atccgataccaactaaatagttagaggaccaaaaagataattaagcc 45276597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 11174042 - 11174079
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  11174042 gataccaattaaatagttagaggaccaaaaaggtaatt 11174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 11920115 - 11920075
Alignment:
Q  8 accaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  11920115 accaaataaatagttagaggaccaaaaatgtaattaagcct 11920075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 15741638 - 15741682
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||  |||||||||| |||||||||||    
T  15741638 ccgataccaattaaatagttaagggaccaaaaaggtaattaagcc 15741682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38588991 - 38589035
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||    
T  38588991 atccaataccaattaaatagttagagaaccaaaaaaataattaag 38589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 7535241 - 7535284
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||||||||||||||||||||  ||||| |||||    
T  7535241 gataccaattaaatagttagaggaccaaaaagataatttagcct 7535284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 12643923 - 12643966
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||| |||||||||||||||||||||||||  ||||||||||    
T  12643923 cgatacaaattaaatagttagaggaccaaaaagataattaagcc 12643966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 27473479 - 27473522
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||||| |||||||||||||||| |||||| |||||    
T  27473479 gataccaattaaattgttagaggaccaaaaaggtaatttagcct 27473522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5435304 - 5435338
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  5435304 atccgataccaattatatagttagaggaccaaaaa 5435338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 7949454 - 7949424
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaa 35  Q
    |||||||||||||||||||||||||||||||    
T  7949454 gataccaattaaatagttagaggaccaaaaa 7949424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 15872029 - 15872071
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||    
T  15872029 gatacaaattaaatagttagaggaccaaaaatgtaatttagcc 15872071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22762559 - 22762525
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||||||||||||| |||||||||    
T  22762559 atccgataccaattaaatagttagatgaccaaaaa 22762525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 43633166 - 43633120
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||||    
T  43633166 cgataccaattaaatagttaagggaccaaaaaagcatttaagcctat 43633120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 5152577 - 5152536
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagc 46  Q
    ||||||||||||| |||||||||| |||||| ||||||||||    
T  5152577 gataccaattaaacagttagaggatcaaaaaggtaattaagc 5152536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 21141917 - 21141836
Alignment:
Q  83 gagggactaaaagccaaagaaattctttagtggaactaaaacaaaatgttaaaataattttaaggactaagaacatatttaa 164  Q
    |||||||||||||   |||||||| ||||| || |||||||  ||| ||||| ||| || |||||||||| |||||||||||    
T  21141917 gagggactaaaagttgaagaaattttttagagggactaaaatgaaaggttaacatatttataaggactaaaaacatatttaa 21141836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 33295778 - 33295733
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    |||||||| |||||||||||||||||||||| || ||||| |||||    
T  33295778 gataccaactaaatagttagaggaccaaaaaggtcattaaacctat 33295733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33820017 - 33820062
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaa-gtaattaag 45  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||    
T  33820017 atccgataccaattaaatagttagaggataaaaaaaggtaattaag 33820062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 45077611 - 45077656
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  45077611 gatactaatcaaatagttagaggaccaaaaaggtaatttagcctat 45077656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 11707792 - 11707748
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||    
T  11707792 gataccaactaaatagttagaggatcaaaaagataattaagccta 11707748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 31988557 - 31988513
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||    
T  31988557 cgataccaattaaatagttaagggaccaaaaaagcatttaagcct 31988513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 40660293 - 40660333
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  40660293 cgataacaactaaatagttagaggaccaaaaaggtaattaa 40660333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 73165 - 73213
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  73165 atccgataccaactaaatagttagaggaccaaaaatgtaattaagccta 73213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 72808 - 72761
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  72808 atccgataccaactaaatagttagaggaccaaaaaggtaattaagcct 72761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15852 - 15898
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  15852 atccgataccagttaaatagttagaggatcaaaaaagtaattaagcc 15898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20797 - 20749
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  20797 atccgataccaactaaatagttagatgaccaaaaatgtaattaagccta 20749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14539 - 14587
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  14539 atccgatatcaattaaatagttagaggaccaaaaaggtaatttagccta 14587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 14177 - 14134
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||||||||||| | ||||||||||||    
T  14177 gataccaattaaatagttagaggaccaaacaggtaattaagcct 14134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45802 - 45754
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  45802 atccgataccaattaaataattagaggaccaaaatagtaatttagccta 45754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20112 - 20155
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaa 44  Q
    |||||||||||| |||||||||||||||||||||| ||||||||    
T  20112 atccgataccaactaaatagttagaggaccaaaaatgtaattaa 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19754 - 19713
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaatt 42  Q
    |||| ||||||| |||||||||||||||||||||| ||||||    
T  19754 atccaataccaactaaatagttagaggaccaaaaaggtaatt 19713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18677 - 18723
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  18677 atccgataccaattaaataattaaaggaccaaaaatgtaattaagcc 18723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 18314 - 18285
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  18314 ataccaattaaatagttagaggaccaaaaa 18285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24566 - 24612
Alignment:
Q  1 atccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||||    
T  24566 atccgataccaactaaatagttagagtaccaaaaatgtaattaagcc 24612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 24203 - 24159
Alignment:
Q  6 ataccaattaaatagttagaggaccaaaaaagtaattaagcctat 50  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||    
T  24203 ataccaactaaatagttagaggaccaaaaaggtaatttagcctat 24159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 9826 - 9780
Alignment:
Q  3 ccgataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||||||||||||||||  |||||||||| | |||||||||||    
T  9826 ccgataccaattaaatagttaagggaccaaaaaggcaattaagccta 9780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 113782 - 113816
Alignment:
Q  13 ttaaatagttagaggaccaaaaaagtaattaagcc 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  113782 ttaaatagttagaggaccaaaaatgtaattaagcc 113816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 113435 - 113391
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    ||||||||||||| ||||||||||||||||| || ||| ||||||    
T  113435 gataccaattaaacagttagaggaccaaaaatgttatttagccta 113391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 4063 - 4030
Alignment:
Q  14 taaatagttagaggaccaaaaaagtaattaagcc 47  Q
    |||||||||||||||||||||| |||||||||||    
T  4063 taaatagttagaggaccaaaaaggtaattaagcc 4030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 81900 - 81856
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaagccta 49  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||    
T  81900 gataccaaataaatagttagaggatcaaaaagataattaagccta 81856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 50518 - 50478
Alignment:
Q  5 gataccaattaaatagttagaggaccaaaaaagtaattaag 45  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  50518 gataccaattaaataggtagaggaccaaaaagataattaag 50478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 230915 - 230871
Alignment:
Q  4 cgataccaattaaatagttagaggaccaaaaaagtaattaagcct 48  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||    
T  230915 cgataccaattaaatagttaagggaccaaaaaagcatttaagcct 230871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University