View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9015_low_34 (Length: 343)
Name: NF9015_low_34
Description: NF9015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9015_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 42038478 - 42038150
Alignment:
| Q |
1 |
tcttcttcaggatcttggttgcttttgtgtctttttgggggttgggttatagtaagatggttaggttatgtttgacgcttgtttgacatgacgcttgtat |
100 |
Q |
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| T |
42038478 |
tcttcttcaggatcttggttgcttttgtgtctttttgggggttgggttatagtaagatggtcaggttatgtttgacgcttgtttgacatggcgcttgtat |
42038379 |
T |
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| Q |
101 |
gacatgttgtctagcggactatttggaactctcacaatgatctaatctttgttgggatgatctatttatgttgagttcttgttggatagggcaaagtttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42038378 |
gacatgttgtctagcggactatttggaactctcacaatgatctaatctttgttgggatgatctatttatgttgagttcttgttggatagggcaaagtttg |
42038279 |
T |
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| Q |
201 |
atcgatagggcaaaattttgatggtggaagtgtttctcggtaaaatcttggcagtgcatacttcttctatgagtgggagacacatccagccatgagttgg |
300 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
42038278 |
atcgatagggcaaaattttgatcgtggaagtgtttctcggtaaaatcttggcagtgcatacttcttctatgagtgggagacacatccagccgtgagttgg |
42038179 |
T |
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| Q |
301 |
aaccgtagaatcttgtgtgagtgtctgtg |
329 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
42038178 |
aaccgtagaatcttgtgtgagtgtctgtg |
42038150 |
T |
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