View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9015_low_35 (Length: 326)

Name: NF9015_low_35
Description: NF9015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9015_low_35
NF9015_low_35
[»] chr6 (18 HSPs)
chr6 (50-309)||(15046420-15046682)
chr6 (1-50)||(16496734-16496783)
chr6 (4-50)||(2018847-2018893)
chr6 (1-41)||(8977161-8977201)
chr6 (1-49)||(31444372-31444420)
chr6 (2-49)||(4891007-4891053)
chr6 (5-50)||(6266630-6266674)
chr6 (1-50)||(8448224-8448272)
chr6 (1-50)||(8457028-8457076)
chr6 (1-50)||(17534605-17534653)
chr6 (1-46)||(21513074-21513118)
chr6 (1-50)||(31205265-31205313)
chr6 (1-49)||(2314681-2314728)
chr6 (1-49)||(7098805-7098852)
chr6 (4-52)||(8939622-8939669)
chr6 (1-33)||(9727509-9727541)
chr6 (1-37)||(9949233-9949269)
chr6 (2-50)||(10330802-10330850)
[»] chr3 (27 HSPs)
chr3 (1-52)||(47069002-47069053)
chr3 (3-49)||(11029662-11029708)
chr3 (1-50)||(28171061-28171110)
chr3 (1-49)||(9583505-9583553)
chr3 (1-56)||(8507924-8507978)
chr3 (1-37)||(3440736-3440772)
chr3 (1-37)||(11751222-11751258)
chr3 (1-49)||(38127924-38127971)
chr3 (1-37)||(40840179-40840215)
chr3 (1-49)||(53583960-53584007)
chr3 (5-43)||(37278622-37278660)
chr3 (3-37)||(52256836-52256870)
chr3 (1-50)||(2687557-2687605)
chr3 (1-50)||(8381077-8381125)
chr3 (1-50)||(13525167-13525215)
chr3 (3-52)||(24910372-24910420)
chr3 (1-50)||(25118788-25118836)
chr3 (1-50)||(32590970-32591018)
chr3 (1-34)||(33095991-33096024)
chr3 (4-41)||(37928844-37928881)
chr3 (1-50)||(46838809-46838857)
chr3 (4-49)||(47410837-47410881)
chr3 (1-49)||(3917765-3917812)
chr3 (1-49)||(4232259-4232306)
chr3 (1-49)||(4833191-4833238)
chr3 (1-49)||(6583317-6583364)
chr3 (1-37)||(43904577-43904613)
[»] chr4 (22 HSPs)
chr4 (1-50)||(13632087-13632136)
chr4 (1-37)||(35273388-35273424)
chr4 (2-50)||(48860001-48860049)
chr4 (1-54)||(1982555-1982607)
chr4 (1-49)||(24550812-24550859)
chr4 (1-37)||(24870607-24870643)
chr4 (1-50)||(9569473-9569521)
chr4 (4-37)||(9696377-9696410)
chr4 (4-37)||(13849366-13849399)
chr4 (1-46)||(37050703-37050747)
chr4 (1-50)||(46488199-46488247)
chr4 (1-54)||(49319725-49319777)
chr4 (1-50)||(49535883-49535931)
chr4 (1-50)||(50779873-50779921)
chr4 (4-49)||(55853399-55853444)
chr4 (1-49)||(5397022-5397069)
chr4 (1-49)||(12821164-12821211)
chr4 (1-49)||(23974724-23974771)
chr4 (1-49)||(30044666-30044713)
chr4 (1-49)||(42154220-42154267)
chr4 (1-49)||(42856562-42856609)
chr4 (1-49)||(49882791-49882838)
[»] chr7 (22 HSPs)
chr7 (1-49)||(33228698-33228746)
chr7 (4-41)||(6328259-6328296)
chr7 (1-50)||(9379989-9380037)
chr7 (5-50)||(30627621-30627666)
chr7 (1-50)||(40013261-40013310)
chr7 (1-50)||(47086382-47086431)
chr7 (1-49)||(2228162-2228209)
chr7 (1-50)||(2354879-2354927)
chr7 (1-50)||(3497599-3497647)
chr7 (1-50)||(4887595-4887643)
chr7 (4-49)||(10422477-10422521)
chr7 (1-50)||(35157166-35157214)
chr7 (1-50)||(37410784-37410832)
chr7 (4-49)||(45041818-45041862)
chr7 (1-50)||(45236928-45236976)
chr7 (1-50)||(47584753-47584801)
chr7 (1-37)||(1869826-1869862)
chr7 (1-33)||(12645380-12645412)
chr7 (1-37)||(24333351-24333387)
chr7 (1-37)||(43188540-43188576)
chr7 (1-49)||(48612516-48612563)
chr7 (1-49)||(48729766-48729813)
[»] chr2 (29 HSPs)
chr2 (1-51)||(45049382-45049431)
chr2 (1-50)||(35476572-35476620)
chr2 (1-49)||(7607322-7607370)
chr2 (2-50)||(19134599-19134647)
chr2 (1-36)||(33898242-33898277)
chr2 (1-52)||(42007297-42007347)
chr2 (4-38)||(10042857-10042891)
chr2 (4-46)||(11543884-11543926)
chr2 (1-51)||(23957049-23957098)
chr2 (2-52)||(33607039-33607088)
chr2 (1-51)||(38490482-38490531)
chr2 (1-51)||(41164730-41164779)
chr2 (1-46)||(10720450-10720495)
chr2 (1-50)||(31054046-31054094)
chr2 (4-49)||(35706851-35706895)
chr2 (1-50)||(42211276-42211324)
chr2 (1-50)||(44948017-44948065)
chr2 (1-49)||(2287391-2287438)
chr2 (1-37)||(9993180-9993216)
chr2 (1-37)||(12221226-12221262)
chr2 (1-49)||(15897213-15897260)
chr2 (1-49)||(16010695-16010742)
chr2 (1-49)||(20251567-20251614)
chr2 (1-49)||(23080180-23080227)
chr2 (1-49)||(32023251-32023298)
chr2 (1-49)||(34667043-34667090)
chr2 (1-49)||(36754823-36754870)
chr2 (5-37)||(37103332-37103364)
chr2 (1-49)||(42160339-42160386)
[»] chr5 (34 HSPs)
chr5 (1-54)||(5203544-5203597)
chr5 (1-50)||(21728658-21728707)
chr5 (1-49)||(1833401-1833449)
chr5 (1-49)||(23074726-23074774)
chr5 (1-49)||(40318867-40318915)
chr5 (1-49)||(41408625-41408673)
chr5 (1-50)||(42448209-42448257)
chr5 (1-37)||(8595569-8595605)
chr5 (1-41)||(26526519-26526559)
chr5 (1-53)||(39143436-39143487)
chr5 (1-36)||(34856592-34856627)
chr5 (1-51)||(28143314-28143363)
chr5 (1-50)||(1269601-1269649)
chr5 (1-50)||(2103024-2103072)
chr5 (1-50)||(4164957-4165005)
chr5 (1-50)||(12878200-12878248)
chr5 (4-37)||(22792195-22792228)
chr5 (1-50)||(24652396-24652444)
chr5 (1-50)||(36726987-36727035)
chr5 (1-50)||(39151008-39151056)
chr5 (1-49)||(1244263-1244310)
chr5 (1-49)||(4617848-4617895)
chr5 (1-49)||(6029611-6029658)
chr5 (1-49)||(6672240-6672287)
chr5 (1-37)||(15067222-15067258)
chr5 (1-49)||(16496599-16496646)
chr5 (5-41)||(16627574-16627610)
chr5 (1-49)||(17869206-17869253)
chr5 (1-49)||(18473913-18473960)
chr5 (2-50)||(19090432-19090479)
chr5 (1-49)||(23311255-23311302)
chr5 (1-49)||(36569278-36569325)
chr5 (1-37)||(37940929-37940964)
chr5 (1-49)||(41562457-41562504)
[»] chr1 (24 HSPs)
chr1 (1-50)||(34010092-34010140)
chr1 (1-49)||(270403-270451)
chr1 (1-37)||(7204590-7204626)
chr1 (1-41)||(8050488-8050528)
chr1 (1-37)||(43837098-43837134)
chr1 (1-49)||(49948240-49948287)
chr1 (2-33)||(22332171-22332202)
chr1 (4-50)||(40685527-40685572)
chr1 (1-34)||(236583-236616)
chr1 (1-50)||(10635487-10635535)
chr1 (1-50)||(19338260-19338308)
chr1 (1-50)||(28999372-28999420)
chr1 (1-50)||(29005088-29005136)
chr1 (1-50)||(40958656-40958704)
chr1 (1-50)||(42631067-42631115)
chr1 (1-50)||(48391954-48392002)
chr1 (1-49)||(8214622-8214669)
chr1 (1-37)||(10430421-10430457)
chr1 (1-41)||(11081043-11081083)
chr1 (1-37)||(39606415-39606451)
chr1 (1-49)||(40809295-40809342)
chr1 (1-49)||(43676106-43676153)
chr1 (1-37)||(45611543-45611579)
chr1 (1-49)||(48314166-48314213)
[»] chr8 (29 HSPs)
chr8 (1-37)||(16816836-16816872)
chr8 (1-53)||(38953562-38953613)
chr8 (4-37)||(3673928-3673961)
chr8 (1-50)||(14188088-14188136)
chr8 (1-54)||(25063333-25063386)
chr8 (2-37)||(11637635-11637670)
chr8 (3-50)||(29845168-29845215)
chr8 (1-51)||(4977116-4977165)
chr8 (3-49)||(31941118-31941164)
chr8 (1-50)||(2442760-2442808)
chr8 (4-49)||(13634845-13634889)
chr8 (4-49)||(13735258-13735302)
chr8 (1-50)||(38070563-38070611)
chr8 (1-37)||(1522703-1522739)
chr8 (1-49)||(2733615-2733662)
chr8 (1-49)||(4430817-4430864)
chr8 (1-37)||(5895877-5895912)
chr8 (1-49)||(6317299-6317346)
chr8 (1-41)||(9569731-9569770)
chr8 (1-37)||(10096623-10096658)
chr8 (1-49)||(11100370-11100417)
chr8 (1-37)||(12320997-12321033)
chr8 (1-49)||(19649580-19649627)
chr8 (1-49)||(24242667-24242715)
chr8 (1-49)||(27849824-27849872)
chr8 (1-41)||(28183793-28183833)
chr8 (1-49)||(35421700-35421747)
chr8 (1-37)||(37953794-37953829)
chr8 (1-49)||(41562441-41562488)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-50)||(160445-160494)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-49)||(195739-195787)
[»] scaffold0635 (1 HSPs)
scaffold0635 (4-38)||(4179-4213)
[»] scaffold0402 (1 HSPs)
scaffold0402 (1-50)||(1323-1371)
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-50)||(1140-1188)
[»] scaffold0013 (1 HSPs)
scaffold0013 (2-51)||(90566-90614)
[»] scaffold0882 (1 HSPs)
scaffold0882 (1-41)||(3779-3818)
[»] scaffold0778 (1 HSPs)
scaffold0778 (1-37)||(829-864)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-49)||(9366-9413)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-49)||(8941-8988)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-33)||(19395-19427)


Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 50 - 309
Target Start/End: Complemental strand, 15046682 - 15046420
Alignment:
Q  50 agatttcttaaattagtcttattattgatttttgagttacttgtaatatcttattattgatttttggttattccaaatctcaaaagcatgtgccccatat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15046682 agatttcttaaattagtcttattattgatttttgagttacttgtaacatcttattattgatttttggttattccaaatctcaaaagcatgtgccccatat 15046583  T
Q  150 tgtgcaaagagaccactagcgctcaatatccatctataaatatcatgcaagttttgtgctgatttcaactcaatctaattagtaaattccaaaaat---- 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||        
T  15046582 tgtgcaaagagaccactagcgctcaatatccatctataaatatcatgcaagttttgtgctgatttcaactcaatctaattagtaaa--ccaaaaatggta 15046485  T
Q  246 -ggtaagggttggtaaatgtagatcttcttcattgatttttatttcttttctattagcttcttta 309  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15046484 aggtaagggttggtaaatgtagatcttcttcattgatttttatttcttttctattagcttcttta 15046420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16496734 - 16496783
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  16496734 cggcctaacaatttcggcatttttgccagttgagctaggacttctggata 16496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 2018847 - 2018893
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  2018847 cctaacaatttcgacatttttaccagttgagctaggacttctggata 2018893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8977201 - 8977161
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  8977201 cggcctaacaatttgggcatttttgccagttgagctaagac 8977161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31444372 - 31444420
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||| ||||||||| ||| |||||||    
T  31444372 cggcctaacaatttcggcatttttgccggttgagctaggacttctggat 31444420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 4891053 - 4891007
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  4891053 ggcctaacaatttcggcattttt-ccagttgagctaagacttctggat 4891007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 6266674 - 6266630
Alignment:
Q  5 ctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||    
T  6266674 ctaacaatttcgacatttt-gccagttgagctaagacttccggata 6266630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8448224 - 8448272
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  8448224 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 8448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8457028 - 8457076
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  8457028 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 8457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17534605 - 17534653
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  17534605 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 17534653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21513118 - 21513074
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctg 46  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  21513118 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctg 21513074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31205265 - 31205313
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  31205265 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 31205313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2314681 - 2314728
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  2314681 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 2314728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7098852 - 7098805
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  7098852 cggcctaacaatttcgaca-ttttaccagttgagctaggacttctggat 7098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 8939669 - 8939622
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggataga 52  Q
    ||||||||||||| |||||| ||||||||||||| ||| ||||||||||    
T  8939669 cctaacaatttcggcatttt-gccagttgagctaggacttctggataga 8939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9727541 - 9727509
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttga 33  Q
    ||||||||||||||||||||||||| |||||||    
T  9727541 cggcctaacaatttcgacatttttgtcagttga 9727509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9949233 - 9949269
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  9949233 cggcctaacaatttcggcatttttaccagttgagcta 9949269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 10330850 - 10330802
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||| | |||||||||||||||||||| ||| | ||||||    
T  10330850 ggcctaacaattttggcatttttgccagttgagctaggacttgtggata 10330802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47069053 - 47069002
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggataga 52  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  47069053 cggcctaacaatttcggcatttttgccagttgagctaagacttctggataga 47069002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 11029708 - 11029662
Alignment:
Q  3 gcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  11029708 gcctaacaatttcgacatttttgccagttgagctaggacttctggat 11029662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28171061 - 28171110
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  28171061 cggcctaacaatttcggcatttttgccagttgagctaggacttctggata 28171110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9583505 - 9583553
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||    
T  9583505 cggcctaacaatttcggcatttttgccagttgagctaaggcttctggat 9583553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8507978 - 8507924
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagatttc 56  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||| |||||    
T  8507978 cggcctaacaatttcggcattttt-ccagttgagctaagacttctggatacatttc 8507924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3440772 - 3440736
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  3440772 cggcctaacaatttcggcatttttgccagttgagcta 3440736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11751258 - 11751222
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  11751258 cggcctaacaatttcggcatttttgccagttgagcta 11751222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38127924 - 38127971
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  38127924 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggat 38127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40840215 - 40840179
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40840215 cggcctaacaatttcggcatttttgccagttgagcta 40840179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 53584007 - 53583960
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  53584007 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggat 53583960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 37278622 - 37278660
Alignment:
Q  5 ctaacaatttcgacatttttgccagttgagctaagacat 43  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  37278622 ctaacaatttcgacatttttgtcagttgagctaggacat 37278660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 52256836 - 52256870
Alignment:
Q  3 gcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  52256836 gcctaacaatatcgacatttttgccagttgagcta 52256870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2687605 - 2687557
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  2687605 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 2687557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8381125 - 8381077
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  8381125 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 8381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13525215 - 13525167
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  13525215 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 13525167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 24910372 - 24910420
Alignment:
Q  3 gcctaacaatttcgacatttttgccagttgagctaagacatctggataga 52  Q
    |||||||||||||| |||||| ||||||||||||| ||| ||||||||||    
T  24910372 gcctaacaatttcggcatttt-gccagttgagctaggacttctggataga 24910420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25118788 - 25118836
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||| ||||    
T  25118788 cggcctaacaatttcgaca-ttttgctagttgagctaagacttctagata 25118836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32591018 - 32590970
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||||||||    
T  32591018 cggcctaacaatttcgaca-ttttaccagttgagctaggacttctggata 32590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33096024 - 33095991
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgag 34  Q
    |||||||||||||||| |||||||||||||||||    
T  33096024 cggcctaacaatttcgtcatttttgccagttgag 33095991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 37928881 - 37928844
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagac 41  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  37928881 cctaacaattttgacatttttgtcagttgagctaagac 37928844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46838809 - 46838857
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| ||||||| |||||||||||| ||| ||||||||    
T  46838809 cggcctaacaatttcggcattttt-ccagttgagctaggacttctggata 46838857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 47410837 - 47410881
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||    
T  47410837 cctaacaatttcgacatttt-gccagttgagctaggacttctggat 47410881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3917812 - 3917765
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  3917812 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 3917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4232259 - 4232306
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  4232259 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 4232306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4833191 - 4833238
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  4833191 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 4833238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6583317 - 6583364
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  6583317 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 6583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43904577 - 43904613
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||||||||  |||||||||||    
T  43904577 cggcctaacaatttcgacatttttttcagttgagcta 43904613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13632136 - 13632087
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  13632136 cggcctaacaatttcgacatttttgccagttgagctaggacttctggata 13632087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35273388 - 35273424
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  35273388 cggcctaacaatttcgacatttttgccagttgagcta 35273424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 48860049 - 48860001
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  48860049 ggcctaacaattacgacatttttgccagttgaactaagacatgtggata 48860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1982607 - 1982555
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagatt 54  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  1982607 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggatagatt 1982555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24550859 - 24550812
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  24550859 cggcctaacaatttcggcatttt-gccagttgagctaagacttctggat 24550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24870643 - 24870607
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24870643 cggcctaacaatttcggcatttttgccagttgagcta 24870607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9569521 - 9569473
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  9569521 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 9569473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 9696377 - 9696410
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||||||||| ||||||||    
T  9696377 cctaacaatttcgacatttttgccaattgagcta 9696410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 13849399 - 13849366
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||||||||| |||||||||||    
T  13849399 cctaacaatttcgacatttttgtcagttgagcta 13849366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37050747 - 37050703
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctg 46  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||    
T  37050747 cggcctaacaatttcggcatttt-gccagttgagctaagacttctg 37050703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46488199 - 46488247
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  46488199 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 46488247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49319777 - 49319725
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagatt 54  Q
    ||||||||||||||||||| |||||  |||||||||| ||| ||||||||||||    
T  49319777 cggcctaacaatttcgaca-ttttgttagttgagctaggacttctggatagatt 49319725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49535931 - 49535883
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  49535931 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 49535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50779873 - 50779921
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||| ||||||| ||||||||    
T  50779873 cggcctaacaatttcggcatttt-gccagttgaactaagacttctggata 50779921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 55853399 - 55853444
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||| | |||||||||||||||||||| ||| |||||||    
T  55853399 cctaacaattttggcatttttgccagttgagctaggacttctggat 55853444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5397022 - 5397069
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  5397022 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 5397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12821211 - 12821164
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  12821211 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 12821164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23974724 - 23974771
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  23974724 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 23974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30044666 - 30044713
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  30044666 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 30044713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42154220 - 42154267
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  42154220 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 42154267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42856609 - 42856562
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  42856609 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 42856562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49882791 - 49882838
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  49882791 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 49882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33228746 - 33228698
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  33228746 cggcctaacaatttcgacatttttgccagttgagctaggacttctggat 33228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 6328259 - 6328296
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagac 41  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  6328259 cctaacaattttgacatttttgccagttgagctaagac 6328296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9380037 - 9379989
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  9380037 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggata 9379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 30627666 - 30627621
Alignment:
Q  5 ctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||    
T  30627666 ctaacaatttcgacatttttgtcagttgagctaggacatcaggata 30627621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40013310 - 40013261
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||||| ||||||||||| ||| ||||||||    
T  40013310 cggcctaacaatttcggcatttttgtcagttgagctaggacttctggata 40013261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47086382 - 47086431
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||||||||| ||||||||||| ||| | ||||||    
T  47086382 cggcctaacaatttcgacatttttgtcagttgagctaggacttatggata 47086431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2228162 - 2228209
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  2228162 cggcctaacaatttcgaca-ttttgccagttgagctacgacttctggat 2228209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2354879 - 2354927
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  2354879 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 2354927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3497599 - 3497647
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  3497599 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 3497647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4887595 - 4887643
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  4887595 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 4887643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 10422521 - 10422477
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  10422521 cctaacaatttcgatatttt-gccagttgagctaagacttctggat 10422477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35157166 - 35157214
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  35157166 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 35157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37410784 - 37410832
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||| ||||    
T  37410784 cggcctaacaatttcggcatttt-gccagttgagctaagacttctagata 37410832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 45041818 - 45041862
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  45041818 cctaacaatttcggcatttt-gccagttgagctaagacttctggat 45041862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45236976 - 45236928
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  45236976 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 45236928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47584753 - 47584801
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||| |||||||||| ||||||||||||| ||| ||||||||    
T  47584753 cggcctaacaatgtcgacatttt-gccagttgagctaggacttctggata 47584801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1869862 - 1869826
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  1869862 cggcctaacaatatcggcatttttgccagttgagcta 1869826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12645380 - 12645412
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttga 33  Q
    ||||||||||||||||||||||||| |||||||    
T  12645380 cggcctaacaatttcgacatttttggcagttga 12645412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24333387 - 24333351
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||||||||||||  ||||||||||    
T  24333387 cggcctaacaatttcgacatttttgtaagttgagcta 24333351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43188576 - 43188540
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  43188576 cggcctaacaatttcggcatttttgccacttgagcta 43188540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48612563 - 48612516
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  48612563 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 48612516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48729766 - 48729813
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  48729766 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 48729813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45049431 - 45049382
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  45049431 cggcctaacaatttcgacatttt-gccagttgagctaagacttctggatag 45049382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35476572 - 35476620
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  35476572 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggata 35476620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7607322 - 7607370
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||||||||| || |||||||| ||| |||||||    
T  7607322 cggcctaacaatttcgacatttttgtcaattgagctaggacttctggat 7607370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 19134599 - 19134647
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||||||| |||||||||||| ||| | ||||||    
T  19134599 ggcctaacaatttcgacattttttccagttgagctaggacttatggata 19134647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 33898277 - 33898242
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagct 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  33898277 cggcctaacaatttcgacatttttgccaattgagct 33898242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42007297 - 42007347
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggataga 52  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||||||||||    
T  42007297 cggcctaacaatttcgaca-ttttaccagttgagctaggacttctggataga 42007347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 10042891 - 10042857
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaa 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  10042891 cctaacaatttcgacattttttccagttgagctaa 10042857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 11543884 - 11543926
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctg 46  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||    
T  11543884 cctaacaatttcggcatttttgccagttgagctaggacttctg 11543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23957098 - 23957049
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    ||||||||||||||||||| |||||||||||||||||  || |||||||||    
T  23957098 cggcctaacaatttcgaca-ttttgccagttgagctagaacttctggatag 23957049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 33607088 - 33607039
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggataga 52  Q
    ||||||||||||||| |||||| ||||||||||||| ||| ||||||||||    
T  33607088 ggcctaacaatttcggcatttt-gccagttgagctaggacttctggataga 33607039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38490482 - 38490531
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  38490482 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggatag 38490531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41164730 - 41164779
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  41164730 cggcctaacaatttcgacacttt-gccagttgagctaggacttctggatag 41164779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10720495 - 10720450
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctg 46  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  10720495 cggcctaacaattttaacatttttgccagttgagctatgacttctg 10720450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31054094 - 31054046
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||| |||||||||| ||||||||||||| ||| ||||||||    
T  31054094 cggcctaacaatatcgacatttt-gccagttgagctaggacctctggata 31054046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 35706895 - 35706851
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||    
T  35706895 cctaacaatttcgacatttt-gccagttgagctaggacttctggat 35706851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42211324 - 42211276
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| |||| |||||||| ||||||| ||||||||    
T  42211324 cggcctaacaatttcgaca-ttttaccagttgaactaagacttctggata 42211276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44948065 - 44948017
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| ||||||||    
T  44948065 cggcctaacaatttcgaca-ttttgtcagttgagctaggacttctggata 44948017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2287391 - 2287438
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  2287391 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 2287438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9993216 - 9993180
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||| |||||||||||||||||||| |||||||||||    
T  9993216 cggcttaacaatttcgacatttttgtcagttgagcta 9993180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12221226 - 12221262
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||  ||||||||||||||||||||    
T  12221226 cggcctaacaatttcatcatttttgccagttgagcta 12221262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15897260 - 15897213
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  15897260 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 15897213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16010695 - 16010742
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  16010695 cggcttaacaatttcgacatttt-gccagttgagctacgacttctggat 16010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20251567 - 20251614
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  20251567 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 20251614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23080180 - 23080227
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  23080180 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 23080227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32023298 - 32023251
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  32023298 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 32023251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34667090 - 34667043
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  34667090 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 34667043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36754823 - 36754870
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  36754823 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 36754870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 37103364 - 37103332
Alignment:
Q  5 ctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||||| |||||||||||    
T  37103364 ctaacaatttcgacatttttgtcagttgagcta 37103332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42160339 - 42160386
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  42160339 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 42160386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5203597 - 5203544
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagatt 54  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||| ||||    
T  5203597 cggcctaacaatttcgacatttttgcctcttgagctaagacttctggatggatt 5203544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21728707 - 21728658
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  21728707 cggcctaacaatttcggcatttttgccagttgagctaggacttctggata 21728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1833401 - 1833449
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  1833401 cggcctaacaatttcggcatttttgccagttgagctatgacttctggat 1833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23074726 - 23074774
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  23074726 cggcctaacaatttcggcatttttgccagttgagctaggacttctggat 23074774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40318867 - 40318915
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  40318867 cggcctaacaatttcggcatttttgccagttgagctatgacttctggat 40318915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41408673 - 41408625
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  41408673 cggcctaacaatttcggcatttttgccagttgagctatgacttctggat 41408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42448257 - 42448209
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  42448257 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggata 42448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8595569 - 8595605
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8595569 cggcctaacaatttcggcatttttgccagttgagcta 8595605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26526559 - 26526519
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  26526559 cggcctaacaatttcggtatttttgccagttgagctaagac 26526519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39143487 - 39143436
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagat 53  Q
    ||||||||||||||||||| ||||||||||||||||| ||| | |||||||||    
T  39143487 cggcctaacaatttcgaca-ttttgccagttgagctaggacttgtggatagat 39143436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34856627 - 34856592
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagct 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  34856627 cggcctaacaatttcggcatttttgccagttgagct 34856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28143314 - 28143363
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  28143314 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggatag 28143363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1269601 - 1269649
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| ||||||||    
T  1269601 cggcctaacaatttcgaca-ttttgtcagttgagctaggacttctggata 1269649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2103072 - 2103024
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  2103072 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 2103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4165005 - 4164957
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  4165005 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 4164957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12878200 - 12878248
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  12878200 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 12878248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 22792195 - 22792228
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||| ||||||||||||||||||||    
T  22792195 cctaacaatttcggcatttttgccagttgagcta 22792228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24652396 - 24652444
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| |||||||||||||| || ||| ||||||||    
T  24652396 cggcctaacaatttcgaca-ttttgccagttgagttaggacttctggata 24652444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36727035 - 36726987
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  36727035 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 36726987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39151008 - 39151056
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||||||||    
T  39151008 cggcctaacaatttcgaca-ttttaccagttgagctaggacttctggata 39151056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1244263 - 1244310
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  1244263 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 1244310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4617848 - 4617895
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  4617848 cggcctaacaatttcgaca-ttttaccagttgagctaggacttctggat 4617895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6029658 - 6029611
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  6029658 cggcctaacaattttgacatttt-gccagttgagctaggacttctggat 6029611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6672287 - 6672240
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  6672287 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 6672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15067222 - 15067258
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  15067222 cggcctaacaatttcgacattttttccaattgagcta 15067258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16496646 - 16496599
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| ||||||||||||| ||| ||| |||||||    
T  16496646 cggcctaacaatttcgaca-ttttgccagttgaactaggacttctggat 16496599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 16627574 - 16627610
Alignment:
Q  5 ctaacaatttcgacatttttgccagttgagctaagac 41  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  16627574 ctaacaatttcggcatttatgccagttgagctaagac 16627610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17869206 - 17869253
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  17869206 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 17869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18473960 - 18473913
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  18473960 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 18473913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 19090479 - 19090432
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||| ||||||||  |||||||||||||||| ||||||||    
T  19090479 ggcctaacaattttgacatttta-ccagttgagctaagacttctggata 19090432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23311255 - 23311302
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  23311255 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 23311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36569325 - 36569278
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  36569325 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 36569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37940964 - 37940929
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  37940964 cggcctaacaatttcgaca-ttttgccagttgagcta 37940929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41562504 - 41562457
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  41562504 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 41562457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34010140 - 34010092
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  34010140 cggcctaacaatttcgacatttt-gccagttgagctaagacttctggata 34010092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 270403 - 270451
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  270403 cggcctaacaatttcggcatttttgccagttgagctaggacttctggat 270451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7204590 - 7204626
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7204590 cggcctaacaatttcggcatttttgccagttgagcta 7204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8050528 - 8050488
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  8050528 cggcctaacaatttcgacatttttgtcggttgagctaagac 8050488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43837134 - 43837098
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43837134 cggcctaacaattccgacatttttgccagttgagcta 43837098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 49948287 - 49948240
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  49948287 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggat 49948240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 22332202 - 22332171
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttga 33  Q
    ||||||||||||||||||||||||||||||||    
T  22332202 ggcctaacaatttcgacatttttgccagttga 22332171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 40685572 - 40685527
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  40685572 cctaacaatttcgacatttt-gccagttgagctaggacttctggata 40685527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 236616 - 236583
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgag 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  236616 cggcctaacaatttcgacatttttgtcagttgag 236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10635535 - 10635487
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  10635535 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 10635487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19338260 - 19338308
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  19338260 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 19338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28999420 - 28999372
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  28999420 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 28999372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29005136 - 29005088
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  29005136 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 29005088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40958656 - 40958704
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  40958656 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 40958704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42631067 - 42631115
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  42631067 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 42631115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48392002 - 48391954
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  48392002 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 48391954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8214669 - 8214622
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||| |||||| |||||||||||| ||| |||||||    
T  8214669 cggcctaacaatttcgatattttt-ccagttgagctaggacttctggat 8214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10430421 - 10430457
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| |||||||| |||||||||||    
T  10430421 cggcctaacaatttcggcatttttgtcagttgagcta 10430457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11081043 - 11081083
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    ||||||| ||||||| |||||||||||||||||| ||||||    
T  11081043 cggcctagcaatttcaacatttttgccagttgagttaagac 11081083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39606451 - 39606415
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  39606451 cggcctaacaatatcggcatttttgccagttgagcta 39606415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40809295 - 40809342
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  40809295 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 40809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43676106 - 43676153
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  43676106 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 43676153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45611543 - 45611579
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||| |||||||| |||||||||||    
T  45611543 cggcctaacaatttcggcatttttgtcagttgagcta 45611579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48314213 - 48314166
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  48314213 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 48314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16816872 - 16816836
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  16816872 cggcctaacaatttcgacatttttgccagttgagcta 16816836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38953562 - 38953613
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagat 53  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  38953562 cggcctaacaatttcggcatttt-gccagttgagctaagacttctggatagat 38953613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 3673928 - 3673961
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||||||||||||||||||    
T  3673928 cctaacaatttcgacatttttgccagttgagcta 3673961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14188136 - 14188088
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  14188136 cggcctaacaatttcgaca-ttttgccagttgagctaggacttctggata 14188088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25063386 - 25063333
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatagatt 54  Q
    |||||||||||||||| |||||||||||||||| ||| ||| ||||||| ||||    
T  25063386 cggcctaacaatttcggcatttttgccagttgaactaggacttctggattgatt 25063333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 11637635 - 11637670
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  11637635 ggcctaacaatttcgacattttttccagttgagcta 11637670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 29845168 - 29845215
Alignment:
Q  3 gcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||| ||||||||||||||| ||| ||| ||||||||    
T  29845168 gcctaacaatttcgatatttttgccagttgaactaggacttctggata 29845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4977116 - 4977165
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  4977116 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggatag 4977165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 31941118 - 31941164
Alignment:
Q  3 gcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||| ||||||||||| |||| ||||||| |||||||    
T  31941118 gcctaacaatttcggcatttttgccaattgaactaagacttctggat 31941164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2442808 - 2442760
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    ||||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  2442808 cggcctaacaatttcgaca-ttttgccagttgagctaggacttatggata 2442760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 13634889 - 13634845
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  13634889 cctaacaatttcggcatttt-gccagttgagctaagacttctggat 13634845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 13735302 - 13735258
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  13735302 cctaacaatttcggcatttt-gccagttgagctaagacttctggat 13735258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38070563 - 38070611
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  38070563 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 38070611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1522739 - 1522703
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||  |||||||||||||||||||    
T  1522739 cggcctaacaatttcggtatttttgccagttgagcta 1522703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2733662 - 2733615
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  2733662 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 2733615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4430817 - 4430864
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  4430817 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 4430864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5895877 - 5895912
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5895877 cggcctaacaatttcgaca-ttttgccagttgagcta 5895912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6317346 - 6317299
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  6317346 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 6317299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9569770 - 9569731
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  9569770 cggcctaacaatttcggcatttt-gccagttgagctaagac 9569731  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10096658 - 10096623
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10096658 cggcctaacaatttcgaca-ttttgccagttgagcta 10096623  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11100370 - 11100417
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| ||||||| |||||||||||| ||| |||||||    
T  11100370 cggcctaacaatttcggcattttt-ccagttgagctaggacttctggat 11100417  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12321033 - 12320997
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  12321033 cggcctaacaattttgacatttttgtcagttgagcta 12320997  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19649580 - 19649627
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  19649580 cggcctaacaatttcggcatttt-gccagttgagctatgacttctggat 19649627  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24242667 - 24242715
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||||| |||||| || ||| |||||||    
T  24242667 cggcctaacaatttcggcatttttgccggttgagttaggacttctggat 24242715  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27849824 - 27849872
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||||| |||||||| || ||| |||||||    
T  27849824 cggcctaacaatttcggcatttttgtcagttgagttaggacttctggat 27849872  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28183793 - 28183833
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    |||||||| ||||||| |||||||| |||||||||||||||    
T  28183793 cggcctaataatttcggcatttttgtcagttgagctaagac 28183833  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35421700 - 35421747
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| ||||||||||||| ||| ||| |||||||    
T  35421700 cggcctaacaatttcgaca-ttttgccagttgaactaggacttctggat 35421747  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37953829 - 37953794
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37953829 cggcctaacaatttcgacattttt-ccagttgagcta 37953794  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41562488 - 41562441
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  41562488 cggcctaacaatttcgaca-ttttaccagttgagctaggacttctggat 41562441  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 160494 - 160445
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| ||||||| |||||||||||| ||| ||||||||    
T  160494 cggcctaacaatttcggcatttttaccagttgagctaggacttctggata 160445  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 195787 - 195739
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||||||||||||| |||||| ||| ||| |||||||    
T  195787 cggcctaacaatttcgacatttttgctagttgaactaggacttctggat 195739  T

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Target: scaffold0635 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 4179 - 4213
Alignment:
Q  4 cctaacaatttcgacatttttgccagttgagctaa 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  4179 cctaacaatttcgacattttttccagttgagctaa 4213  T

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Target: scaffold0402 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1323 - 1371
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  1323 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 1371  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1140 - 1188
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggata 50  Q
    |||||||||||||||| |||||| ||||||||||||| ||| ||||||||    
T  1140 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggata 1188  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 90614 - 90566
Alignment:
Q  2 ggcctaacaatttcgacatttttgccagttgagctaagacatctggatag 51  Q
    ||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  90614 ggcctaacaatttcggcatttt-gccagttgagctaggacttctggatag 90566  T

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Target: scaffold0882 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3779 - 3818
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagac 41  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  3779 cggcctaacaatttcggcatttt-gccagttgagctaagac 3818  T

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Target: scaffold0778 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 864 - 829
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagcta 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  864 cggcctaacaatttcgaca-ttttgccagttgagcta 829  T

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Target: scaffold0432 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9413 - 9366
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  9413 cggcctaacaatttcggcatttt-gccagttgagctaggacttctggat 9366  T

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Target: scaffold0061 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8941 - 8988
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttgagctaagacatctggat 49  Q
    |||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  8941 cggcctaacaatttcggcatttt-gccagttgagctatgacttctggat 8988  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19395 - 19427
Alignment:
Q  1 cggcctaacaatttcgacatttttgccagttga 33  Q
    ||||||||||||||| |||||||||||||||||    
T  19395 cggcctaacaatttcaacatttttgccagttga 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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