View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9015_low_37 (Length: 302)
Name: NF9015_low_37
Description: NF9015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9015_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 23667285 - 23666999
Alignment:
| Q |
1 |
gaagacgaagaagataaaaagaataagaagatgcaaatgaaacaaaggaataataacgtccttataattttgatactacatattatggattaatacaaaa |
100 |
Q |
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| T |
23667285 |
gaagacgaagaagataaaaagaataagaagatgcaaatgaaacaaaggaataataacgtccttataattttgatactccatattatggattaatacaaaa |
23667186 |
T |
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| Q |
101 |
ctatagaggttgaaggttgaacgattatgattaaaaaacactgttgaaaggggt-tgtaacagttgaacagttcacatatccatgaaagtagaacatgca |
199 |
Q |
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| T |
23667185 |
ctatagaggttgaaggttgaacgattatgattaaaaaacactgttgaaaggggtatgtaacagttgaacagttcacatatccatgaaagtagaacatgca |
23667086 |
T |
|
| Q |
200 |
tgaatttctgagcctcattttcgtaccatatattatagcttctgcaaaattagcccacactgctgtgttatttacttgcttcttttt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23667085 |
tgaatttctgagcctcattttcgtaccatatattatagcttctgcaaaattagcccacactgctgtgttatttacttgcttcttttt |
23666999 |
T |
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