View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9015_low_41 (Length: 298)
Name: NF9015_low_41
Description: NF9015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9015_low_41 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 2 - 284
Target Start/End: Original strand, 275576 - 275863
Alignment:
| Q |
2 |
agatggacat-caaatgaaaatgaaagagaga----taccaattgatgattggaagagaagttgacaagatcatgagtaggatgaggttgaatgatgagt |
96 |
Q |
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|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
275576 |
agatggacatgcaaatgaaaatgaaagagagaaatataccaattgatgattggaagagaagttgacaagatcatgagtaggatgaggttgaatgatgagt |
275675 |
T |
|
| Q |
97 |
tcaatggaaggaatgagcttaacggtggcaaagaaattcgaaatactgaaagcgatagtattgccgtaatatacatcgcttggattacctaacaatccaa |
196 |
Q |
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|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
275676 |
tcaatggaaggaatgagcttaacggtggcaaagaaattggaaatactgaaagcgatagtattgccgtaatatacatcgcttggatttcctaacaatccaa |
275775 |
T |
|
| Q |
197 |
ctcttgcatatgctttgtgttcaatcaccaccgccgccgccgctgcatgatcatcatcaccacctccttccattttgattcacctctt |
284 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
275776 |
ctcttgcatatgctttgtgttcaatcaccaccgccgccgccgctgcatgatcatcatcaccacctccttccattttgattcacctctt |
275863 |
T |
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