View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9016_low_14 (Length: 493)
Name: NF9016_low_14
Description: NF9016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9016_low_14 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 46920360 - 46920103
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46920360 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
46920261 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46920260 |
ggaataaaaatagggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
46920161 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccctta |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
46920160 |
ttcccatcctcatattcccaggaataaattttataacatggaaacaaacaccccctta |
46920103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 11031563 - 11031818
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11031563 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
11031662 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11031663 |
ggaataaaaatagggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
11031762 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccct |
273 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |
|
|
| T |
11031763 |
ttcccatcctcatattcctagaaataaattttataacctggaaacaaacaccccct |
11031818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 18319858 - 18319605
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18319858 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcatttctaggaataaaacattccaactcctttttcatg |
18319759 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18319758 |
ggaataaaaatagggagatcatgggttaaaaaatttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
18319659 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacacccc |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18319658 |
ttcccatcctcatattcccaggaataaattttataacctggaaacaaacacccc |
18319605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 52126213 - 52126479
Alignment:
| Q |
17 |
aaaattaattggcagttgaaaaaacatggtggtag---------tggggttttcatgtagcaaggcaaatgtcattcttaggaataaaa-cattccaact |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| |
|
|
| T |
52126213 |
aaaattaattggcagttgaaaaaacatggtggtaggagacatagtggggttttcaagtagcaaggcactagtcattcctaggaataaaaacattccaact |
52126312 |
T |
|
| Q |
107 |
cctttttcatgggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacat |
206 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
52126313 |
cctctttcatgggaataaaaatgggaagatcatgggttaaaaattttcctgggtataatttgtttccaggtatatttttcttgtaccttctaccaaacat |
52126412 |
T |
|
| Q |
207 |
gggaaagtgcattcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccct |
273 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
52126413 |
gggaaagtgcattcccatcctcatattccaaggaataaattttataacctggaaacaaacaccccct |
52126479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 34705604 - 34705436
Alignment:
| Q |
272 |
cttatgttttatggtttattttgacgcttgaatgatctttgtgtaattgtcatttactctacggtttctgattgtaatatacgaacattgtagtgcttaa |
371 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34705604 |
cttatgttttatggtttattttgacacttgaatgatccttgtgtaattgtcatttactctaaggtttctgattgtaatatacgaacattgtagtgcttaa |
34705505 |
T |
|
| Q |
372 |
tctgtaattaagttttggctttctttggtttgacatcatttaccaccaaaaatctattgtagttgcatt |
440 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34705504 |
tctgtaattaagttttggctttctttggtttgacatcatttaccaccaaaaatctattgtagttgcatt |
34705436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 477
Target Start/End: Complemental strand, 34704902 - 34704856
Alignment:
| Q |
431 |
tagttgcattgttattttaataaatttttattgtttttactctgtgc |
477 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34704902 |
tagttgcattgttattttaataaatttttattgtttttactctgtgc |
34704856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 16849881 - 16850136
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16849881 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
16849980 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16849981 |
ggaataaaaatagggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
16850080 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccct |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16850081 |
ttcccatcctcatattcccaggaataaattttataacctggaaacaaacaccccct |
16850136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 269
Target Start/End: Original strand, 31738765 - 31739026
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtag---------tggggttttcatgtagcaaggcaaatgtcattcttaggaataaaac-attccaactc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||| ||||||||||| |||||||||| |
|
|
| T |
31738765 |
aaattaattggcagttgaaaaaacatggtggtaggagacatagtggggttttcacgtagcaagggaatagtcattcctaggaataaaaatattccaactc |
31738864 |
T |
|
| Q |
108 |
ctttttcatgggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatg |
207 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31738865 |
ctctttcatgggaataaaaatggggagatcatgggttaaaaaatttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatg |
31738964 |
T |
|
| Q |
208 |
ggaaagtgcattcccatcctcatattcccaggaataaattttataacctgaaaacaaacacc |
269 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
31738965 |
ggaaagtgcattcccatcctcatattttaagaaataaattttataacctggaaacaaacacc |
31739026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 54207490 - 54207233
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
54207490 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
54207391 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54207390 |
ggaataaaaatagggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
54207291 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccctta |
275 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54207290 |
ttcccatcctcatattcctaggaataaattttataacctggaaacaaacaccccctta |
54207233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 9117697 - 9117443
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9117697 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
9117598 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9117597 |
ggaataaaaatagggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
9117498 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccc |
272 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9117497 |
ttcccatcctcatattcctaggaataaattttataacctggaaacaaacaccccc |
9117443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 34967346 - 34967090
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggt-ggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34967346 |
aaattaattggcagttgaaaaaacatggttggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacatcccaactcctttttcat |
34967247 |
T |
|
| Q |
117 |
gggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgc |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
34967246 |
gggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgagaaagtgc |
34967147 |
T |
|
| Q |
217 |
attcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccct |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34967146 |
attcccatcctcatattcccaggaataaattttataacctggaaacaaacaccccct |
34967090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 27742675 - 27742928
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27742675 |
aaattaattggtagttgaaaatacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
27742774 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27742775 |
ggaataaaaatggggagatcatgggttaaaaattttcatgggtataatctgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
27742874 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacacccc |
271 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
27742875 |
ttcccatcctcatattcccaagaataaattttataacctggaaacaaacacccc |
27742928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 471
Target Start/End: Original strand, 18978098 - 18978174
Alignment:
| Q |
395 |
tttggtttgacatcatttaccaccaaaaatctattgtagttgcattgttattttaataaatttttattgtttttact |
471 |
Q |
| |
|
|||||||||||| || ||||||||||||| || ||||| |||||||||| |||||||| | |||| || |||||||| |
|
|
| T |
18978098 |
tttggtttgacaccacttaccaccaaaaacctcttgtacttgcattgttgttttaatagagttttcttatttttact |
18978174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 25477017 - 25476960
Alignment:
| Q |
192 |
ccttctaccaaacatgggaaagtgcattcccatcctcatattcccaggaataaatttt |
249 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| || | |||||||||| ||||||||||| |
|
|
| T |
25477017 |
ccttctaccaaacatgggaatgtgtattcctattcacatattcccatgaataaatttt |
25476960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 38007253 - 38006996
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38007253 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
38007154 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38007153 |
ggaataaaaatagggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
38007054 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccctta |
275 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
38007053 |
ttcccatcctcatattcctaggaataaattttataacctggaaacaaacaccccctta |
38006996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 51083623 - 51083358
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtag---------tggggttttcatgtagcaaggcaaatgtcattcttaggaataaaa-cattccaactc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||| ||||| ||||| |
|
|
| T |
51083623 |
aaattaattggcagttgaaaaaacatggtggtaggagacatagtggggttttcacgtagcaaggcaatagtcattcctaggaataaaaacattcaaactc |
51083524 |
T |
|
| Q |
108 |
ctttttcatgggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatg |
207 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
51083523 |
ctctttcatgggaataaaaatggagagatcatgggttaaaaattttcctgggtataatttgttcccaagtatatttttcttttaccttctaccaaacatg |
51083424 |
T |
|
| Q |
208 |
ggaaagtgcattcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccccct |
273 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||| |
|
|
| T |
51083423 |
ggaaagtgcattcccatcctcatattccaaggaataaattttataacttggaaacaaacaccccct |
51083358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 11465836 - 11465584
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11465836 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
11465737 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11465736 |
ggaataaaaatagggagatcatgggttaaaaattttcatgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
11465637 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccc |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11465636 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacaccc |
11465584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 3428733 - 3428480
Alignment:
| Q |
18 |
aaattaattggcagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcttaggaataaaacattccaactcctttttcatg |
117 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3428733 |
aaattaattggtagttgaaaaaacatggtggtagtggggttttcatgtagcaaggcaaatgtcattcctaggaataaaacattccaactcctttttcatg |
3428634 |
T |
|
| Q |
118 |
ggaataaaaatggggagatcatgggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
217 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3428633 |
ggaataaaaatagggagatcataggttaaaaattttcctgggtataatttgttcccaggtatatttttcttttaccttctaccaaacatgggaaagtgca |
3428534 |
T |
|
| Q |
218 |
ttcccatcctcatattcccaggaataaattttataacctgaaaacaaacacccc |
271 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3428533 |
ttcccatcctcatatttccaggaataaattttataacctggaaacaaacacccc |
3428480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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