View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9019_low_11 (Length: 304)

Name: NF9019_low_11
Description: NF9019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9019_low_11
NF9019_low_11
[»] chr6 (29 HSPs)
chr6 (37-298)||(24588423-24588684)
chr6 (180-286)||(16625016-16625122)
chr6 (181-271)||(6112148-6112238)
chr6 (183-286)||(15704302-15704405)
chr6 (183-271)||(19772403-19772491)
chr6 (183-271)||(31477095-31477183)
chr6 (188-270)||(22949848-22949930)
chr6 (188-270)||(22953804-22953886)
chr6 (188-270)||(23872292-23872374)
chr6 (188-270)||(23876248-23876330)
chr6 (183-270)||(16760998-16761086)
chr6 (183-286)||(27324452-27324553)
chr6 (183-286)||(2077412-2077515)
chr6 (183-270)||(22806967-22807054)
chr6 (180-286)||(27073585-27073691)
chr6 (180-286)||(26981195-26981301)
chr6 (182-267)||(14073754-14073839)
chr6 (183-254)||(15991086-15991157)
chr6 (180-258)||(2862860-2862938)
chr6 (182-287)||(18387531-18387636)
chr6 (184-258)||(15640938-15641012)
chr6 (133-182)||(28963737-28963786)
chr6 (185-236)||(2759769-2759820)
chr6 (136-181)||(15509448-15509493)
chr6 (183-227)||(14322801-14322845)
chr6 (207-258)||(2882190-2882241)
chr6 (248-287)||(17963991-17964030)
chr6 (136-185)||(29157067-29157116)
chr6 (198-254)||(15645330-15645386)
[»] chr5 (36 HSPs)
chr5 (181-287)||(557295-557401)
chr5 (181-287)||(36936900-36937006)
chr5 (181-286)||(41997264-41997369)
chr5 (181-286)||(42002033-42002138)
chr5 (181-287)||(562067-562173)
chr5 (181-287)||(36941654-36941760)
chr5 (181-271)||(13300879-13300969)
chr5 (180-277)||(36949394-36949491)
chr5 (181-287)||(31732136-31732242)
chr5 (185-287)||(32460937-32461039)
chr5 (183-286)||(10754050-10754153)
chr5 (183-277)||(21323367-21323461)
chr5 (181-271)||(23976976-23977066)
chr5 (180-287)||(21826822-21826929)
chr5 (184-263)||(3666536-3666615)
chr5 (181-287)||(12044519-12044630)
chr5 (180-287)||(26869702-26869809)
chr5 (197-287)||(8770842-8770932)
chr5 (185-246)||(15395233-15395294)
chr5 (136-181)||(3667038-3667083)
chr5 (180-277)||(24435571-24435668)
chr5 (135-185)||(12044013-12044064)
chr5 (136-185)||(557857-557907)
chr5 (136-185)||(562627-562677)
chr5 (180-246)||(41099170-41099236)
chr5 (136-182)||(42002598-42002645)
chr5 (136-185)||(36936393-36936443)
chr5 (136-185)||(36941147-36941197)
chr5 (136-185)||(41997804-41997854)
chr5 (248-287)||(26667902-26667941)
chr5 (248-287)||(26939499-26939538)
chr5 (248-287)||(29167405-29167444)
chr5 (248-287)||(36424262-36424301)
chr5 (136-185)||(32460427-32460477)
chr5 (211-251)||(1429584-1429624)
chr5 (250-298)||(6154867-6154915)
[»] chr3 (52 HSPs)
chr3 (181-287)||(3034242-3034348)
chr3 (181-287)||(3693217-3693323)
chr3 (181-287)||(8888529-8888635)
chr3 (181-287)||(3673185-3673291)
chr3 (181-287)||(8070278-8070384)
chr3 (181-287)||(8883769-8883875)
chr3 (181-287)||(10585579-10585685)
chr3 (183-286)||(9706982-9707085)
chr3 (183-286)||(16749311-16749414)
chr3 (183-286)||(19776485-19776588)
chr3 (180-287)||(6595781-6595888)
chr3 (180-286)||(18350163-18350269)
chr3 (183-271)||(22758571-22758659)
chr3 (180-276)||(51922944-51923040)
chr3 (180-287)||(8223534-8223641)
chr3 (180-287)||(14425231-14425338)
chr3 (183-270)||(37438951-37439038)
chr3 (188-270)||(4106722-4106804)
chr3 (188-270)||(4110574-4110656)
chr3 (188-270)||(15965671-15965753)
chr3 (188-270)||(15969595-15969677)
chr3 (188-270)||(15973519-15973601)
chr3 (185-287)||(45903938-45904040)
chr3 (180-287)||(29827-29934)
chr3 (180-287)||(8197051-8197158)
chr3 (183-286)||(8488782-8488884)
chr3 (180-254)||(35456328-35456401)
chr3 (214-286)||(18699200-18699272)
chr3 (180-258)||(47540907-47540985)
chr3 (180-258)||(11997395-11997472)
chr3 (180-246)||(12899131-12899197)
chr3 (187-298)||(53358690-53358805)
chr3 (198-258)||(429057-429117)
chr3 (136-185)||(8070838-8070888)
chr3 (231-286)||(14671993-14672048)
chr3 (180-227)||(16023191-16023238)
chr3 (136-185)||(3034805-3034855)
chr3 (136-185)||(3673727-3673777)
chr3 (136-185)||(8884332-8884382)
chr3 (136-185)||(8889078-8889128)
chr3 (180-258)||(16043129-16043207)
chr3 (183-236)||(18011990-18012043)
chr3 (180-225)||(49020114-49020159)
chr3 (199-238)||(3166194-3166233)
chr3 (136-182)||(3693784-3693831)
chr3 (248-287)||(18467836-18467875)
chr3 (248-287)||(32473456-32473495)
chr3 (248-287)||(39775160-39775199)
chr3 (248-286)||(14438132-14438170)
chr3 (180-258)||(16048621-16048699)
chr3 (183-236)||(19340123-19340176)
chr3 (185-234)||(47540522-47540571)
[»] scaffold0182 (2 HSPs)
scaffold0182 (185-298)||(9273-9386)
scaffold0182 (136-185)||(8764-8814)
[»] chr8 (29 HSPs)
chr8 (181-287)||(4237730-4237836)
chr8 (181-287)||(4242469-4242575)
chr8 (181-287)||(31449254-31449360)
chr8 (181-287)||(43302073-43302179)
chr8 (181-287)||(8330752-8330858)
chr8 (181-287)||(37772306-37772412)
chr8 (180-286)||(4582684-4582790)
chr8 (181-287)||(25367375-25367481)
chr8 (183-286)||(21384344-21384447)
chr8 (183-286)||(21387764-21387867)
chr8 (188-270)||(18861966-18862048)
chr8 (180-287)||(22104274-22104381)
chr8 (180-286)||(19393119-19393225)
chr8 (188-270)||(21827335-21827417)
chr8 (185-287)||(34818099-34818201)
chr8 (182-286)||(16066607-16066711)
chr8 (183-271)||(21411638-21411726)
chr8 (183-271)||(21806130-21806218)
chr8 (183-286)||(23915092-23915195)
chr8 (180-258)||(14036083-14036161)
chr8 (217-277)||(25733590-25733650)
chr8 (136-185)||(31448747-31448797)
chr8 (134-185)||(4237222-4237274)
chr8 (136-185)||(4241963-4242013)
chr8 (180-226)||(17153198-17153244)
chr8 (180-226)||(17157440-17157486)
chr8 (179-253)||(42972749-42972823)
chr8 (135-178)||(14036609-14036654)
chr8 (193-258)||(15197266-15197331)
[»] chr2 (28 HSPs)
chr2 (181-287)||(10160109-10160215)
chr2 (180-276)||(25375499-25375595)
chr2 (183-287)||(28855730-28855833)
chr2 (181-283)||(30658780-30658882)
chr2 (183-270)||(1284130-1284217)
chr2 (180-276)||(34070029-34070125)
chr2 (180-287)||(22845001-22845108)
chr2 (183-286)||(23068144-23068247)
chr2 (188-270)||(30344312-30344394)
chr2 (180-298)||(26897215-26897333)
chr2 (180-287)||(24292850-24292957)
chr2 (183-286)||(42248827-42248930)
chr2 (180-286)||(6856797-6856903)
chr2 (185-286)||(377683-377784)
chr2 (197-285)||(7559756-7559844)
chr2 (180-287)||(24286282-24286389)
chr2 (180-286)||(30635393-30635502)
chr2 (183-277)||(9785759-9785851)
chr2 (181-271)||(6297282-6297371)
chr2 (180-238)||(17327708-17327766)
chr2 (180-254)||(17452974-17453053)
chr2 (136-182)||(35602757-35602804)
chr2 (136-185)||(10159601-10159651)
chr2 (248-287)||(18345035-18345074)
chr2 (131-185)||(30659318-30659373)
chr2 (212-274)||(30637112-30637177)
chr2 (180-258)||(30641499-30641577)
chr2 (250-287)||(17968397-17968434)
[»] chr1 (34 HSPs)
chr1 (181-277)||(40232777-40232873)
chr1 (181-287)||(3094688-3094794)
chr1 (180-287)||(17213832-17213939)
chr1 (181-271)||(41097347-41097437)
chr1 (180-287)||(13893915-13894022)
chr1 (183-286)||(39243414-39243517)
chr1 (183-286)||(39246969-39247072)
chr1 (183-271)||(41387366-41387454)
chr1 (180-287)||(1067080-1067187)
chr1 (180-287)||(14804103-14804210)
chr1 (180-271)||(14819587-14819678)
chr1 (180-287)||(22428584-22428690)
chr1 (188-270)||(1924450-1924532)
chr1 (188-270)||(20923464-20923546)
chr1 (180-277)||(21498260-21498357)
chr1 (180-287)||(52100610-52100716)
chr1 (180-287)||(26198957-26199064)
chr1 (207-271)||(16836701-16836765)
chr1 (181-288)||(19725295-19725400)
chr1 (199-286)||(33055636-33055723)
chr1 (180-286)||(2367643-2367749)
chr1 (180-286)||(2384634-2384740)
chr1 (180-253)||(23285227-23285300)
chr1 (184-232)||(8267244-8267292)
chr1 (189-253)||(23254584-23254648)
chr1 (212-286)||(26319593-26319667)
chr1 (184-277)||(19726975-19727067)
chr1 (248-287)||(26927153-26927192)
chr1 (248-286)||(10135950-10135988)
chr1 (139-185)||(27307360-27307406)
chr1 (184-246)||(27308280-27308342)
chr1 (136-185)||(8273059-8273108)
chr1 (136-182)||(14204447-14204495)
chr1 (247-287)||(51040942-51040982)
[»] chr7 (45 HSPs)
chr7 (181-287)||(8076649-8076755)
chr7 (181-298)||(9650349-9650466)
chr7 (181-287)||(27256836-27256942)
chr7 (183-270)||(18426543-18426630)
chr7 (181-287)||(40864752-40864858)
chr7 (183-271)||(20488563-20488651)
chr7 (180-271)||(8954655-8954746)
chr7 (183-286)||(16459772-16459875)
chr7 (183-270)||(45169322-45169409)
chr7 (185-271)||(20485202-20485288)
chr7 (183-286)||(14928027-14928130)
chr7 (183-286)||(15351493-15351596)
chr7 (180-254)||(9008789-9008863)
chr7 (180-285)||(838820-838925)
chr7 (180-285)||(1204000-1204105)
chr7 (222-287)||(47102138-47102203)
chr7 (199-287)||(29727211-29727299)
chr7 (183-286)||(14259606-14259709)
chr7 (182-286)||(36477577-36477674)
chr7 (180-277)||(845996-846093)
chr7 (180-277)||(853373-853470)
chr7 (180-277)||(1211377-1211474)
chr7 (184-287)||(19096853-19096957)
chr7 (183-286)||(32302439-32302542)
chr7 (180-254)||(10532221-10532295)
chr7 (181-271)||(19640914-19641004)
chr7 (182-254)||(10499494-10499566)
chr7 (182-254)||(10504523-10504595)
chr7 (184-268)||(11017473-11017557)
chr7 (180-254)||(13343817-13343891)
chr7 (136-185)||(9649844-9649893)
chr7 (183-271)||(16580844-16580932)
chr7 (189-252)||(2629290-2629353)
chr7 (136-185)||(47102692-47102742)
chr7 (183-258)||(1043847-1043922)
chr7 (184-258)||(11297381-11297455)
chr7 (180-251)||(15566012-15566081)
chr7 (248-287)||(26341831-26341870)
chr7 (136-182)||(43457097-43457143)
chr7 (180-253)||(10488686-10488759)
chr7 (136-181)||(10499011-10499056)
chr7 (136-181)||(10504040-10504085)
chr7 (136-181)||(13343311-13343356)
chr7 (248-293)||(44509829-44509874)
chr7 (145-185)||(23866884-23866924)
[»] chr4 (31 HSPs)
chr4 (181-298)||(13521374-13521491)
chr4 (181-287)||(3997451-3997557)
chr4 (181-287)||(7902500-7902606)
chr4 (180-286)||(15225765-15225871)
chr4 (187-271)||(47575277-47575361)
chr4 (181-271)||(31297884-31297974)
chr4 (181-287)||(34561023-34561129)
chr4 (183-270)||(12488414-12488501)
chr4 (180-287)||(14868456-14868563)
chr4 (180-287)||(14877371-14877478)
chr4 (183-286)||(10713540-10713643)
chr4 (183-286)||(10927310-10927413)
chr4 (180-271)||(14899004-14899095)
chr4 (183-286)||(15011207-15011310)
chr4 (188-270)||(14953451-14953533)
chr4 (188-270)||(25690610-25690692)
chr4 (180-287)||(8660791-8660898)
chr4 (180-287)||(9185072-9185179)
chr4 (180-287)||(9190937-9191044)
chr4 (213-287)||(41817381-41817455)
chr4 (180-275)||(26034799-26034894)
chr4 (180-275)||(39320173-39320267)
chr4 (136-185)||(13520869-13520918)
chr4 (184-252)||(52742616-52742684)
chr4 (231-286)||(18023221-18023276)
chr4 (190-236)||(32545533-32545579)
chr4 (180-253)||(26188056-26188129)
chr4 (185-258)||(55073774-55073847)
chr4 (183-227)||(43477408-43477452)
chr4 (248-286)||(5270856-5270894)
chr4 (136-182)||(39320722-39320768)
[»] scaffold0205 (1 HSPs)
scaffold0205 (183-286)||(30867-30970)
[»] scaffold0034 (1 HSPs)
scaffold0034 (183-286)||(121166-121269)
[»] scaffold0060 (2 HSPs)
scaffold0060 (181-287)||(47362-47468)
scaffold0060 (181-287)||(52306-52412)
[»] scaffold0019 (1 HSPs)
scaffold0019 (180-286)||(30284-30390)
[»] scaffold0009 (1 HSPs)
scaffold0009 (180-277)||(71740-71838)
[»] scaffold0572 (1 HSPs)
scaffold0572 (183-286)||(10367-10470)
[»] scaffold0144 (1 HSPs)
scaffold0144 (183-277)||(7486-7580)
[»] scaffold0061 (1 HSPs)
scaffold0061 (181-287)||(49373-49479)
[»] scaffold0017 (1 HSPs)
scaffold0017 (181-287)||(149155-149261)
[»] scaffold0229 (1 HSPs)
scaffold0229 (183-270)||(10817-10904)
[»] scaffold0157 (1 HSPs)
scaffold0157 (183-270)||(31976-32063)
[»] scaffold0141 (1 HSPs)
scaffold0141 (183-270)||(13403-13490)
[»] scaffold0132 (1 HSPs)
scaffold0132 (180-287)||(24684-24791)
[»] scaffold0124 (1 HSPs)
scaffold0124 (183-270)||(21377-21464)
[»] scaffold0011 (1 HSPs)
scaffold0011 (183-286)||(127003-127106)
[»] scaffold0041 (1 HSPs)
scaffold0041 (181-287)||(35093-35199)
[»] scaffold1910 (1 HSPs)
scaffold1910 (182-286)||(466-570)
[»] scaffold0452 (1 HSPs)
scaffold0452 (183-271)||(12359-12447)
[»] scaffold0431 (1 HSPs)
scaffold0431 (183-271)||(14868-14956)
[»] scaffold0020 (1 HSPs)
scaffold0020 (181-277)||(629-725)
[»] scaffold0044 (2 HSPs)
scaffold0044 (180-287)||(81157-81264)
scaffold0044 (180-271)||(64775-64866)
[»] scaffold0018 (1 HSPs)
scaffold0018 (183-286)||(21907-22010)
[»] scaffold0015 (2 HSPs)
scaffold0015 (180-287)||(193655-193762)
scaffold0015 (183-286)||(187972-188075)
[»] scaffold0415 (1 HSPs)
scaffold0415 (188-270)||(1104-1186)
[»] scaffold0070 (2 HSPs)
scaffold0070 (181-287)||(59025-59131)
scaffold0070 (181-230)||(63284-63333)
[»] scaffold0327 (1 HSPs)
scaffold0327 (180-277)||(19610-19707)
[»] scaffold0357 (1 HSPs)
scaffold0357 (180-287)||(3735-3842)
[»] scaffold0031 (1 HSPs)
scaffold0031 (183-270)||(35402-35489)
[»] scaffold0575 (1 HSPs)
scaffold0575 (184-286)||(5273-5375)
[»] scaffold0628 (2 HSPs)
scaffold0628 (183-271)||(7003-7091)
scaffold0628 (136-182)||(5831-5877)
[»] scaffold0292 (1 HSPs)
scaffold0292 (183-286)||(7767-7870)
[»] scaffold0008 (2 HSPs)
scaffold0008 (180-254)||(256444-256518)
scaffold0008 (145-182)||(257801-257838)
[»] scaffold0004 (1 HSPs)
scaffold0004 (182-287)||(199791-199894)
[»] scaffold0932 (1 HSPs)
scaffold0932 (180-258)||(1027-1105)
[»] scaffold0478 (1 HSPs)
scaffold0478 (180-258)||(8215-8293)
[»] scaffold0096 (1 HSPs)
scaffold0096 (223-275)||(22320-22372)
[»] scaffold0155 (1 HSPs)
scaffold0155 (224-287)||(22274-22337)
[»] scaffold0720 (1 HSPs)
scaffold0720 (180-258)||(5939-6017)
[»] scaffold0045 (1 HSPs)
scaffold0045 (136-181)||(84074-84120)
[»] scaffold0232 (1 HSPs)
scaffold0232 (192-253)||(22583-22644)


Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 37 - 298
Target Start/End: Original strand, 24588423 - 24588684
Alignment:
Q  37 ttgatctttatattcttaagttcgtcatgcatataccagctcgagccaagaacaataaggttgaggcatgaacctcaaactaatagatcacttgggaagt 136  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24588423 ttgatctttttattcttaagttcgtcatgcatataccagctcgagccaagaacaataaggttgaggcatgaacctcaaaccaatagatcacttgggaagt 24588522  T
Q  137 gttggaacatgtgtggaaattaagtaaaaagactaaacacaaattcccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24588523 gttggaacatgtgtggaaattgagtaaaaagactaaacacaaattcccaaaggttctcacttattagttttgaattttctctataaatagagagctcaca 24588622  T
Q  237 cagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttccctctctgctcc 298  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  24588623 cagtgcattccacacaccgaaattcacagttgatgcttcctatgtttttccctctcttctcc 24588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 16625122 - 16625016
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| |    
T  16625122 ttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgt 16625023  T
Q  280 gtttttc 286  Q
    | |||||    
T  16625022 gcttttc 16625016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 6112148 - 6112238
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6112148 tcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgcattcaacacaccgaaattcacagttgatg 6112238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 15704302 - 15704405
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||| ||||    
T  15704302 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgagattcacagttgatgcttcctgtgtt 15704401  T
Q  283 tttc 286  Q
    ||||    
T  15704402 tttc 15704405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 19772403 - 19772491
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  19772403 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 19772491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 31477095 - 31477183
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  31477095 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccaaaattcacagttgatg 31477183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 22949930 - 22949848
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 22949848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 22953886 - 22953804
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 22953804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 23872374 - 23872292
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 23872292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 23876330 - 23876248
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 23876248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 16761086 - 16760998
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctc-tataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  16761086 ccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16760998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 27324452 - 27324553
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||| ||||| ||||    
T  27324452 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacac--tgcattctacacaccgaaattcacagttgatgcttcctgtgtt 27324549  T
Q  283 tttc 286  Q
    ||||    
T  27324550 tttc 27324553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 2077515 - 2077412
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    |||||||||||||||| |||||| | || | || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||| || |    
T  2077515 ccaaagtttctcactttttagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 2077416  T
Q  283 tttc 286  Q
    ||||    
T  2077415 tttc 2077412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 22807054 - 22806967
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||| ||||||||| | || | ||||||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  22807054 ccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattctacacaccgaaattcacagttgat 22806967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 27073691 - 27073585
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||  |||||||   || ||||||| ||||||||||||||||| |    
T  27073691 ttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgtttcctgt 27073592  T
Q  280 gtttttc 286  Q
    | |||||    
T  27073591 gcttttc 27073585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 26981301 - 26981195
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||  |||||||   || ||||||| ||||||||||| ||||| |    
T  26981301 ttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgcttcctgt 26981202  T
Q  280 gtttttc 286  Q
    | |||||    
T  26981201 gcttttc 26981195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 14073839 - 14073754
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagtt 267  Q
    ||||||||||||||  |||||||| |||| ||||||||||||||||||||||| ||| ||||||||  || |||||||||||||||    
T  14073839 cccaaagtttctcatctattagttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagtt 14073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 15991086 - 15991157
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| | |  | |||||||||||||||||    
T  15991086 ccaaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacacc 15991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 2862860 - 2862938
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||| | ||| || || || |||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  2862860 ttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttcattccatacaccgaaa 2862938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 18387636 - 18387531
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgt 281  Q
    ||||||||||||||| ||||| || |||| ||||| ||||||||||||||||||||| ||||||    || || ||| |||||||||||| ||||| ||     
T  18387636 cccaaagtttctcacctattaattgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatgattcctgtgc 18387537  T
Q  282 ttttcc 287  Q
    ||||||    
T  18387536 ttttcc 18387531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 15641012 - 15640938
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||||||| |||| |||||||| |||||| ||||||||||||| ||||||||| | | ||||| |||||||||||    
T  15641012 caaagtttatcacgtattagttgtgaattctctctataaatagtgagctcacataattcattcaacacaccgaaa 15640938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 28963737 - 28963786
Alignment:
Q  133 aagtgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 182  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  28963737 aagtgttggaacatgtgtggaaattgagttaaaagaccaaacacaaattc 28963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 2759769 - 2759820
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcaca 236  Q
    ||||||||| ||||||||||| |||||||||||| |||| ||||||||||||    
T  2759769 aaagtttcttacttattagttgtgaattttctctgtaaacagagagctcaca 2759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 15509493 - 15509448
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 181  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||    
T  15509493 tgttggaacatatgtgaaaattaagttaaaagactaaacacaaatt 15509448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 14322801 - 14322845
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaataga 227  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||    
T  14322801 ccaaagtttctcacttattagttgtaaattatctctataaataga 14322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 2882190 - 2882241
Alignment:
Q  207 tgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||||||||||  |||||||||| ||| ||||||| |||||||||    
T  2882190 tgaattttctctataaattcagagctcacatagttcattccatacaccgaaa 2882241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Original strand, 17963991 - 17964030
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  17963991 acacaccgaaattcacagttgatgcttcctgtgtttttcc 17964030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 29157067 - 29157116
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 185  Q
    ||||||||||||  | |||||||||| |||||||| ||||||||||||||    
T  29157067 tgttggaacatgcatagaaattaagttaaaagactgaacacaaattccca 29157116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 15645386 - 15645330
Alignment:
Q  198 tattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    ||||||||  ||||||||| ||||||||||||||||||| | | ||||| |||||||    
T  15645386 tattagttgcgaattttctatataaatagagagctcacataatccattctacacacc 15645330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 557401 - 557295
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  557401 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 557302  T
Q  281 tttttcc 287  Q
    |||||||    
T  557301 tttttcc 557295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 36936900 - 36937006
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  36936900 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 36936999  T
Q  281 tttttcc 287  Q
    |||||||    
T  36937000 tttttcc 36937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 41997369 - 41997264
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  41997369 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 41997270  T
Q  281 tttttc 286  Q
    ||||||    
T  41997269 tttttc 41997264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 42002138 - 42002033
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  42002138 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 42002039  T
Q  281 tttttc 286  Q
    ||||||    
T  42002038 tttttc 42002033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 562173 - 562067
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  562173 tcccaaagtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 562074  T
Q  281 tttttcc 287  Q
    |||||||    
T  562073 tttttcc 562067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 36941654 - 36941760
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||    
T  36941654 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccatacaccgaaattcacagttgatgcttcctgtg 36941753  T
Q  281 tttttcc 287  Q
    |||||||    
T  36941754 tttttcc 36941760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 13300879 - 13300969
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13300879 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 13300969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 36949491 - 36949394
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  36949491 ttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgcattcaacacaccgaaaatcacaattgatgtttcct 36949394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 31732242 - 31732136
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  31732242 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 31732143  T
Q  281 tttttcc 287  Q
     ||||||    
T  31732142 cttttcc 31732136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 32460937 - 32461039
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttt 284  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||    
T  32460937 aaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgcattccatacaccgaaattcacagttgatgcttcctgtgtttt 32461036  T
Q  285 tcc 287  Q
    |||    
T  32461037 tcc 32461039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 10754153 - 10754050
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  10754153 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10754054  T
Q  283 tttc 286  Q
    ||||    
T  10754053 tttc 10754050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 21323367 - 21323461
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||    
T  21323367 ccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgttttccatacaccgaaattcacagttgatgcttcct 21323461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 23976976 - 23977066
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23976976 tcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgcattccatacactgaaattcacagttgatg 23977066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 21826929 - 21826822
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||| |    
T  21826929 ttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttgatgattcctgt 21826830  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  21826829 gcttttcc 21826822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 3666615 - 3666536
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcac 263  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  3666615 caaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggcattctacacaccgaaattcac 3666536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 12044519 - 12044630
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca-----cagtgcattccacacaccgaaattcacagttgatgtttc 275  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||     |||||||||||||||||||||||||| |||||||| |||    
T  12044519 tcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcacacacagcagtgcattccacacaccgaaattcaaagttgatgcttc 12044618  T
Q  276 ctatgtttttcc 287  Q
    || |||||||||    
T  12044619 ctgtgtttttcc 12044630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 26869702 - 26869809
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  26869702 ttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgt 26869801  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  26869802 gcttttcc 26869809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 197 - 287
Target Start/End: Complemental strand, 8770932 - 8770842
Alignment:
Q  197 ttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||   |||| ||||||||||||||||| ||||| |||||||||    
T  8770932 ttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacactgaaattcacagttgatgcttcctgtgtttttcc 8770842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 15395233 - 15395294
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 246  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  15395233 aaagttactcacttattagttgtgaattttctctataaatagagagctcactcggtgcattc 15395294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3667083 - 3667038
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 181  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  3667083 tgttggaacatgtgtggaaattgagtaaaaagactaaacacaaatt 3667038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 24435571 - 24435668
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    |||| ||||| | ||||||||||||   ||| |||||||||||||||||||||| ||||||||||||  ||||||||| | |||||| |||| |||||    
T  24435571 ttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgcattcttcacaccgaattccacagtcgatgattcct 24435668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 12044013 - 12044064
Alignment:
Q  135 gtgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  12044013 gtgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 12044064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 557907 - 557857
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  557907 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 562677 - 562627
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  562677 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 562627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 41099236 - 41099170
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 246  Q
    |||||||||||| |||| ||||||||  ||| ||||||||||||||||| ||||||||| |||||||    
T  41099236 ttcccaaagtttatcacctattagttgggaagtttctctataaatagagggctcacacaatgcattc 41099170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 42002645 - 42002598
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattc 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  42002645 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattc 42002598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 36936393 - 36936443
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  36936393 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 36936443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 36941147 - 36941197
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  36941147 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 36941197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 41997854 - 41997804
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  41997854 tgttggaacatgtgtgaaaattgagttaaaaagactaaacacaaattccca 41997804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 26667941 - 26667902
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  26667941 acacaccgaaattcacagttgatgcttcctgtgtttttcc 26667902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 26939538 - 26939499
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  26939538 acacaccgaaattcacagttgatgcttcctgtgtttttcc 26939499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Original strand, 29167405 - 29167444
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  29167405 acacaccgaaattcacagttgatgcttcctgtgtttttcc 29167444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 36424301 - 36424262
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  36424301 acacaccgaaattcacagttgatgttttctgtgtttttcc 36424262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 32460427 - 32460477
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||    
T  32460427 tgttggaacatgtgttgaaattgagttaaaaagactaatcacaaattccca 32460477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 1429584 - 1429624
Alignment:
Q  211 ttttctctataaatagagagctcacacagtgcattccacac 251  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  1429584 ttttttctataaatagagagctcacatagtgcattctacac 1429624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 6154867 - 6154915
Alignment:
Q  250 acaccgaaattcacagttgatgtttcctatgtttttccctctctgctcc 298  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||| ||||    
T  6154867 acaccgaaattcacagttgatgcttcctgtgttttttcttctcttctcc 6154915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 3034348 - 3034242
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  3034348 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 3034249  T
Q  281 tttttcc 287  Q
    |||||||    
T  3034248 tttttcc 3034242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 3693323 - 3693217
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  3693323 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 3693224  T
Q  281 tttttcc 287  Q
    |||||||    
T  3693223 tttttcc 3693217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8888635 - 8888529
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  8888635 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 8888536  T
Q  281 tttttcc 287  Q
    |||||||    
T  8888535 tttttcc 8888529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 3673291 - 3673185
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||    
T  3673291 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacactgaaattcacagttgatgcttcctgtg 3673192  T
Q  281 tttttcc 287  Q
    |||||||    
T  3673191 tttttcc 3673185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8070384 - 8070278
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |     
T  8070384 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccagacaccgaaattcacagttgatgcttcctgta 8070285  T
Q  281 tttttcc 287  Q
    |||||||    
T  8070284 tttttcc 8070278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8883875 - 8883769
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  8883875 tcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 8883776  T
Q  281 tttttcc 287  Q
    |||||||    
T  8883775 tttttcc 8883769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 10585579 - 10585685
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||| ||||| ||    
T  10585579 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccaaaattcacagttgatgcttcctgtg 10585678  T
Q  281 tttttcc 287  Q
    |||||||    
T  10585679 tttttcc 10585685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 9706982 - 9707085
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  9706982 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 9707081  T
Q  283 tttc 286  Q
    ||||    
T  9707082 tttc 9707085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 16749311 - 16749414
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  16749311 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 16749410  T
Q  283 tttc 286  Q
    ||||    
T  16749411 tttc 16749414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 19776588 - 19776485
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  19776588 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 19776489  T
Q  283 tttc 286  Q
    ||||    
T  19776488 tttc 19776485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 6595781 - 6595888
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||| | ||||||| |||||||| ||||| |    
T  6595781 ttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgcattttacacatcaaaattcatagttgatgcttcctgt 6595880  T
Q  280 gtttttcc 287  Q
    ||||||||    
T  6595881 gtttttcc 6595888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 18350163 - 18350269
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||| |    
T  18350163 ttcccaaagtttctcacctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcctgt 18350262  T
Q  280 gtttttc 286  Q
    |||||||    
T  18350263 gtttttc 18350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 22758571 - 22758659
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||| ||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22758571 ccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 22758659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 51923040 - 51922944
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcc 276  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   |||||||||||||||||||||| ||||    
T  51923040 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatgattcc 51922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 8223641 - 8223534
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  8223641 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgt 8223542  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  8223541 gcttttcc 8223534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 14425231 - 14425338
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||| | |||| |||||||| |||||||||||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  14425231 ttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgattcctgt 14425330  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  14425331 gcttttcc 14425338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 37438951 - 37439038
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||    
T  37438951 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacgccgaaattcacagttgat 37439038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 4106722 - 4106804
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 4106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 4110574 - 4110656
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 4110656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 15965753 - 15965671
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 15965671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 15969677 - 15969595
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 15969595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 15973601 - 15973519
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 15973519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 45903938 - 45904040
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttt 284  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||  |||| ||| | |||||||||||||||||| ||||||||| || |||    
T  45903938 aaagtttctcacttattactttggaactttctctataaatagagagctcacaatgtgctttcaatacaccgaaattcacagttaatgtttcctgtgcttt 45904037  T
Q  285 tcc 287  Q
    |||    
T  45904038 tcc 45904040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 29934 - 29827
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||| ||||||||||||| ||||||||| |||||||   |||||||||||||||| ||||| ||||| |    
T  29934 ttcccaaagtttctcacctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatgatgattcctgt 29835  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  29834 gcttttcc 29827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 8197158 - 8197051
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||||||    || ||||||||||||||||||| ||||| |    
T  8197158 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttgatgcttcctgt 8197059  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  8197058 gcttttcc 8197051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 8488782 - 8488884
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||| ||||| ||||||||||| | |||||||||| ||||| || |    
T  8488782 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagt-cattctacacaccgaaagttacagttgatgcttcctgtgct 8488880  T
Q  283 tttc 286  Q
    ||||    
T  8488881 tttc 8488884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 35456328 - 35456401
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||||    
T  35456328 ttcccaaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacacc 35456401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 18699200 - 18699272
Alignment:
Q  214 tctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||| || |||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgcttttc 18699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 47540907 - 47540985
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||| ||| ||||| ||||| |||||    
T  47540907 ttcccaaagtttctcacatattagttgtgaattttctctataaatagaaagttcacatagttcattctacacatcgaaa 47540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 11997395 - 11997472
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||  ||| ||||| |||||| ||||    
T  11997395 ttcccaaagtttctcaat-attagttgtgaattttctctataaatagagagctcacgtagtacattctacacactgaaa 11997472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 12899131 - 12899197
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 246  Q
    |||||||||||||||||||||||| | |||||||||||||||||||  ||| ||||| |||||||||    
T  12899131 ttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgcattc 12899197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 298
Target Start/End: Complemental strand, 53358805 - 53358690
Alignment:
Q  187 agtttctcacttattagttttgaattttctctataaatagagagctca--cacagtgcattccacacaccgaaat--tcacagttgatgtttcctatgtt 282  Q
    ||||| ||||||||||||| |||| ||||| |||||||||||||||||  |||| ||||||| |||||||| |||  ||| |||||||| ||| | ||||    
T  53358805 agtttttcacttattagttgtgaactttctttataaatagagagctcacacacaatgcattctacacaccgtaattgtcatagttgatgcttcatgtgtt 53358706  T
Q  283 tttccctctctgctcc 298  Q
    ||| ||||||| ||||    
T  53358705 ttttcctctcttctcc 53358690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 429117 - 429057
Alignment:
Q  198 tattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||| || ||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  429117 tattacttgtgaattttctctataaataaagagctcacaaagttcattccacacaccgaaa 429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 8070888 - 8070838
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8070888 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 8070838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 14672048 - 14671993
Alignment:
Q  231 ctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||| || |||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttc 14671993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 16023238 - 16023191
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaataga 227  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  16023238 ttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 3034855 - 3034805
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3034855 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 3034805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 3673777 - 3673727
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3673777 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 3673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 8884382 - 8884332
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8884382 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattccca 8884332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 8889128 - 8889078
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8889128 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattccca 8889078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 16043207 - 16043129
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||||||||||| ||||||||||||   ||| ||||||||||||||||| |||| || | |||||||  ||||||||||    
T  16043207 ttcccaaagtttttcacttattagtagagaactttctctataaatagagggctctcaaaatgcattcttcacaccgaaa 16043129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 18012043 - 18011990
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca 236  Q
    ||||||||| |||| |||||||| ||||||||||||||||||| | ||||||||    
T  18012043 ccaaagtttatcacatattagttgtgaattttctctataaataaatagctcaca 18011990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 49020159 - 49020114
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaata 225  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||    
T  49020159 ttcccaaaatttatcacttattagttgtgaattttctctataaata 49020114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 3166194 - 3166233
Alignment:
Q  199 attagttttgaattttctctataaatagagagctcacaca 238  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  3166194 attagttatgaattttttctataaatagagagctcacaca 3166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 3693831 - 3693784
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattc 182  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||    
T  3693831 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattc 3693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 18467875 - 18467836
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  18467875 acacaccgaaattcacagttgatgcttcctgtgtttttcc 18467836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Original strand, 32473456 - 32473495
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  32473456 acacaccgaaattcacagttgatgcttcctgtgtttttcc 32473495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Original strand, 39775160 - 39775199
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  39775160 acacaccgaaattcacagttgatgcttcctgtgtttttcc 39775199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 14438132 - 14438170
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  14438132 acacaccgaaattcacagttgatgcttcctgtgtttttc 14438170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 16048699 - 16048621
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||||||||||| ||||||||||||   ||| ||||||||||||||||| |||| || | || ||||  ||||||||||    
T  16048699 ttcccaaagtttttcacttattagtagagaactttctctataaatagagggctctcaaaatgtattcttcacaccgaaa 16048621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 19340176 - 19340123
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca 236  Q
    ||||||||||| || ||||| || |||||||||| |||||||||| ||||||||    
T  19340176 ccaaagtttctaacatattatttgtgaattttctttataaatagatagctcaca 19340123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 47540522 - 47540571
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctca 234  Q
    |||||||||||| |||||||| ||||||||||||| ||||| || |||||    
T  47540522 aaagtttctcacatattagttgtgaattttctctaaaaataaagggctca 47540571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 185 - 298
Target Start/End: Original strand, 9273 - 9386
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttt 284  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9273 aaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttt 9372  T
Q  285 tccctctctgctcc 298  Q
    | ||||||| ||||    
T  9373 ttcctctcttctcc 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 8764 - 8814
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8764 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 8814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 4237730 - 4237836
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||    
T  4237730 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatgcttcctgtg 4237829  T
Q  281 tttttcc 287  Q
    |||||||    
T  4237830 tttttcc 4237836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 4242469 - 4242575
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||    
T  4242469 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatgcttcctgtg 4242568  T
Q  281 tttttcc 287  Q
    |||||||    
T  4242569 tttttcc 4242575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 31449254 - 31449360
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  31449254 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgctttctgtg 31449353  T
Q  281 tttttcc 287  Q
    |||||||    
T  31449354 tttttcc 31449360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 43302073 - 43302179
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  43302073 tcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgcattccacacatcgaaattcacagttgatgcttcctatg 43302172  T
Q  281 tttttcc 287  Q
    |||||||    
T  43302173 tttttcc 43302179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 8330752 - 8330858
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||    
T  8330752 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccatacaccgaaattcacagttgatgcttcctgtg 8330851  T
Q  281 tttttcc 287  Q
     ||||||    
T  8330852 cttttcc 8330858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 37772412 - 37772306
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  37772412 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 37772313  T
Q  281 tttttcc 287  Q
    |||||||    
T  37772312 tttttcc 37772306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 4582684 - 4582790
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||| |    
T  4582684 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcctgt 4582783  T
Q  280 gtttttc 286  Q
    |||||||    
T  4582784 gtttttc 4582790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 25367375 - 25367481
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||| ||| | ||    
T  25367375 tcccaaagtttctcacttactagttgtgaactttctctataaatagagagttcacacagtgctttccatacaccgaaattcacaattgatgcttcatgtg 25367474  T
Q  281 tttttcc 287  Q
    |||||||    
T  25367475 tttttcc 25367481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 21384447 - 21384344
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||| || |    
T  21384447 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgct 21384348  T
Q  283 tttc 286  Q
    ||||    
T  21384347 tttc 21384344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 21387867 - 21387764
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||| || |    
T  21387867 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgct 21387768  T
Q  283 tttc 286  Q
    ||||    
T  21387767 tttc 21387764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 18861966 - 18862048
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 18862048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 22104381 - 22104274
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| |||||||   ||||||||||||||| |||||| ||||| |    
T  22104381 ttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttgatgattcctgt 22104282  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  22104281 gcttttcc 22104274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 19393119 - 19393225
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||    || ||||||||||||||||||| ||||| |    
T  19393119 ttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttgatgcttcctgt 19393218  T
Q  280 gtttttc 286  Q
    | |||||    
T  19393219 gcttttc 19393225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 21827335 - 21827417
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 21827417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 34818099 - 34818201
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttt 284  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||| || |||    
T  34818099 aaagtttctcagttattagttgtgaactttctctataaatagagagttcacacagtgctttcggtacaccgaaattcacagttgatgcttcctgtgcttt 34818198  T
Q  285 tcc 287  Q
    |||    
T  34818199 tcc 34818201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 16066607 - 16066711
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgt 281  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||| |    |||||||||||||||||||||| ||||| | |    
T  16066607 cccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatgcttcctgtat 16066706  T
Q  282 ttttc 286  Q
    |||||    
T  16066707 ttttc 16066711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 21411726 - 21411638
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  21411726 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatg 21411638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 21806218 - 21806130
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  21806218 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatg 21806130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 23915195 - 23915092
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||| ||||||||| | || | || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||| || |    
T  23915195 ccaaagtttctcatttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 23915096  T
Q  283 tttc 286  Q
    ||||    
T  23915095 tttc 23915092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 14036161 - 14036083
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||||||||| ||||| |  |||||||| ||||||||||||||||||||| | | |||||||||||||||||    
T  14036161 ttcccaaagtttctcacatattaatcgtgaattttttctataaatagagagctcacaaaattcattccacacaccgaaa 14036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 25733590 - 25733650
Alignment:
Q  217 ctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  25733590 ctataaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcct 25733650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 31448747 - 31448797
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  31448747 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 31448797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 4237222 - 4237274
Alignment:
Q  134 agtgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  4237222 agtgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 4237274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 4241963 - 4242013
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  4241963 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 4242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 17153244 - 17153198
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatag 226  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  17153244 ttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 17157440 - 17157486
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatag 226  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  17157440 ttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 42972823 - 42972749
Alignment:
Q  179 attcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 253  Q
    |||||||||||||||||||| |||||    ||||||||||||||||||| |  ||||| ||||||||| ||||||    
T  42972823 attcccaaagtttctcactttttagtgggaaattttctctataaatagatatttcacatagtgcattctacacac 42972749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 14036654 - 14036609
Alignment:
Q  135 gtgttggaacatgtgtggaaatt--aagtaaaaagactaaacacaa 178  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  14036654 gtgttggaacatgtgtggaaattagaagttaaaagactaaacacaa 14036609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 15197331 - 15197266
Alignment:
Q  193 tcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||| |||||||| ||||||| | |||||||||||||| ||| | ||| |||||||| ||||||||    
T  15197331 tcacatattagttgtgaatttacactataaatagagagttcagatagttcattccacgcaccgaaa 15197266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 10160109 - 10160215
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  10160109 tcccaaagtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtg 10160208  T
Q  281 tttttcc 287  Q
    |||||||    
T  10160209 tttttcc 10160215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 25375595 - 25375499
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcc 276  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  25375595 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgcattctacacactgaaattcacagttgatgattcc 25375499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 28855833 - 28855730
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  28855833 ccaaagtttctcatttattagttgtgaatttcc-ctataaatagagagctcacaaagtgcattcgacacaccgaaattcacagttgatgattcctatgtt 28855735  T
Q  283 tttcc 287  Q
    |||||    
T  28855734 tttcc 28855730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 30658882 - 30658780
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||| ||||    
T  30658882 tcccaaagtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgcattccacatacacaaattcacagttgatgcttcatatg 30658783  T
Q  281 ttt 283  Q
    |||    
T  30658782 ttt 30658780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 1284217 - 1284130
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1284217 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1284130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 34070125 - 34070029
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcc 276  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||    
T  34070125 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcc 34070029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 22845108 - 22845001
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |  ||| | ||||||||||| |||||| ||| | |    
T  22845108 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgcaatgtacagaacgaaattcacaattgatgcttcttgt 22845009  T
Q  280 gtttttcc 287  Q
    ||||||||    
T  22845008 gtttttcc 22845001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 23068144 - 23068247
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    |||||||||||| |||||||||| | || | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  23068144 ccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 23068243  T
Q  283 tttc 286  Q
    ||||    
T  23068244 tttc 23068247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 30344312 - 30344394
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 30344394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 26897333 - 26897215
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  26897333 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttgatgcttcctgt 26897234  T
Q  280 gtttttccctctctgctcc 298  Q
    | ||||  |||||| ||||    
T  26897233 gctttttgctctcttctcc 26897215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 24292850 - 24292957
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| | |||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  24292850 ttcccaaagtttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgt 24292949  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  24292950 gcttttcc 24292957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 42248930 - 42248827
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| |||| |||||| ||||| || |    
T  42248930 ccaaagtttctcacctattagttcggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatgcttcctgtgct 42248831  T
Q  283 tttc 286  Q
    ||||    
T  42248830 tttc 42248827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 6856903 - 6856797
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||     |||||||||||||||||||| ||||| |    
T  6856903 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttgatgcttcctgt 6856804  T
Q  280 gtttttc 286  Q
    | |||||    
T  6856803 gcttttc 6856797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 377683 - 377784
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttt 284  Q
    |||||||||||| | |||||| |||| ||| ||||||||||||||||||||| | |||||| |  |||||||||||||||||||||| ||||| ||||||    
T  377683 aaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatgcttcctgtgtttt 377782  T
Q  285 tc 286  Q
    ||    
T  377783 tc 377784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 7559756 - 7559844
Alignment:
Q  197 ttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgttttt 285  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||   ||||  |||||||||||||||| ||||| |||||||    
T  7559756 ttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacacttaaattcacagttgatgcttcctgtgttttt 7559844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 24286282 - 24286389
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  24286282 ttcccaaagcttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgt 24286381  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  24286382 gcttttcc 24286389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 30635502 - 30635393
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaata--gagagctcacacagtgcattccacacaccg-aaattcacagttgatgtttcc 276  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||   |||||||||| ||||||||  |||||||| |||||||||||||||| ||||    
T  30635502 ttccccaagtttctcacttattagttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgcttcc 30635403  T
Q  277 tatgtttttc 286  Q
    | || |||||    
T  30635402 tgtgcttttc 30635393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 9785851 - 9785759
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||||||||| | || | || ||||||||||||| ||||||  |||||||  |||||||||||||||||||||||| |||||    
T  9785851 ccaaagtttctcacttattagttgtaaactatccctataaatagagaactcaca--gtgcattttacacaccgaaattcacagttgatgcttcct 9785759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 6297282 - 6297371
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||| ||||||||||||| | || |||||||| |||||||||||||||||||| | ||| | |||| |||||||||||||||||    
T  6297282 tcccaaagtttatcacttattagttgtcaactttctcta-aaatagagagctcacacagttctttctatacacagaaattcacagttgatg 6297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 17327766 - 17327708
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacaca 238  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17327766 ttcccaaaatttctcacttattagttgtaaattttctctataaatagagagctcacaca 17327708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 17452974 - 17453053
Alignment:
Q  180 ttcccaaagtttctcacttattagttttg-----aattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    |||||||||||||||||||||||| || |     ||||||||||||||||||||| |||||| ||| |||||||||||||    
T  17452974 ttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacatagtacattccacacacc 17453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 35602804 - 35602757
Alignment:
Q  136 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattc 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  35602804 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattc 35602757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 10159601 - 10159651
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  10159601 tgttggaacatctgtggaaattgagttaaaaagactaaacacaaattccca 10159651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 18345074 - 18345035
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  18345074 acacaccgaaattcacagttgatgcttcctgtgtttttcc 18345035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 30659373 - 30659318
Alignment:
Q  131 ggaagtgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 185  Q
    |||| |||||||||||||||||||||| || ||||||||||||||| ||| |||||    
T  30659373 ggaattgttggaacatgtgtggaaattgagttaaaaagactaaacaaaaactccca 30659318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 30637177 - 30637112
Alignment:
Q  212 tttctctataaatag--agagctcacacagtgcattccacacaccg-aaattcacagttgatgttt 274  Q
    ||||||||||||||   |||||||||| ||||||||  |||||||| |||||||||||||||||||    
T  30637177 tttctctataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgttt 30637112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 30641499 - 30641577
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||| |||||||||||| ||||||||  || ||||||||||||||||  || | ||  ||| |||||||||||||||||    
T  30641499 ttccaaaagtttctcacatattagttgagatttttctctataaataggtagattacgtagttcattccacacaccgaaa 30641577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 17968397 - 17968434
Alignment:
Q  250 acaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  17968397 acaccgaaattcacagttgatgcttcctgtgtttttcc 17968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 40232777 - 40232873
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40232777 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 40232873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 3094794 - 3094688
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||    
T  3094794 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgcattccacacaccgaaattcacagttgatacttcctgtg 3094695  T
Q  281 tttttcc 287  Q
    |||||||    
T  3094694 tttttcc 3094688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 17213832 - 17213939
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| | ||||||||||| | ||||||||||||||||    
T  17213832 ttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtacattcgatacaccgaaatttatagttgatgtttcctat 17213931  T
Q  280 gtttttcc 287  Q
    ||||||||    
T  17213932 gtttttcc 17213939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 41097347 - 41097437
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41097347 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 41097437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 13894022 - 13893915
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||||||| ||||| |    
T  13894022 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagttcacacaatgcattctacacactgaaaatcacagttgatgcttcctgt 13893923  T
Q  280 gtttttcc 287  Q
    ||||||||    
T  13893922 gtttttcc 13893915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 39243414 - 39243517
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  39243414 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 39243513  T
Q  283 tttc 286  Q
    ||||    
T  39243514 tttc 39243517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 39246969 - 39247072
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  39246969 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 39247068  T
Q  283 tttc 286  Q
    ||||    
T  39247069 tttc 39247072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 41387366 - 41387454
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41387366 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 41387454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 1067187 - 1067080
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    ||| |||||||||||||||||| ||||| |    
T  1067187 ttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcacacattgcattatggacaacgaaattcacagttgatgcttcctgt 1067088  T
Q  280 gtttttcc 287  Q
    ||||||||    
T  1067087 gtttttcc 1067080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 14804210 - 14804103
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| || ||||||| | || ||||||||||||||||||| ||||| |    
T  14804210 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttgatgattcctgt 14804111  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  14804110 gcttttcc 14804103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 14819678 - 14819587
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||| | || |||||||||||||||||||    
T  14819678 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttgatg 14819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 22428584 - 22428690
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  22428584 ttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttgatgattcctgt 22428682  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  22428683 gcttttcc 22428690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 1924450 - 1924532
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1924532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 20923464 - 20923546
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 20923546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 21498357 - 21498260
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||    
T  21498357 ttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcct 21498260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 52100610 - 52100716
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||  ||||||||||| ||||| |    
T  52100610 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcatacaatgcattcaacacaccgaaa-acacagttgatgattcctgt 52100708  T
Q  280 gtttttcc 287  Q
    ||||||||    
T  52100709 gtttttcc 52100716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 26199064 - 26198957
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||| |||| | |||| | |||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  26199064 ttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgt 26198965  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  26198964 gcttttcc 26198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 16836701 - 16836765
Alignment:
Q  207 tgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  16836701 tgaattttctctataaatagagagctcacacagtgcattctggacaccgaaattcacagttgatg 16836765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 288
Target Start/End: Original strand, 19725295 - 19725400
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||| ||||||||| |||  ||||||||||||||||||| ||||||| |||||||    ||||||||||||||||||||| ||||| ||    
T  19725295 tcccaaagtttctcatttattagttgtga--tttctctataaatagagagttcacacattgcattctgggcaccgaaattcacagttgatgcttcctgtg 19725392  T
Q  281 tttttccc 288  Q
     |||||||    
T  19725393 cttttccc 19725400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 33055723 - 33055636
Alignment:
Q  199 attagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||| ||| | ||||||||    
T  33055723 attagttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatgattcttgtgtttttc 33055636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 2367749 - 2367643
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||| | | ||  |||||||||||||||||||||||||| |||||||   |||| ||||||||||||||||| ||||| |    
T  2367749 ttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgt 2367650  T
Q  280 gtttttc 286  Q
    | |||||    
T  2367649 gcttttc 2367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 2384634 - 2384740
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||| | | ||  |||||||||||||||||||||||||| |||||||   |||| ||||||||||||||||| ||||| |    
T  2384634 ttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgt 2384733  T
Q  280 gtttttc 286  Q
    | |||||    
T  2384734 gcttttc 2384740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 23285227 - 23285300
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 253  Q
    ||||||||| ||||||| ||||| || ||||||||||||||||||||| ||| |||| | ||||||| ||||||    
T  23285227 ttcccaaaggttctcacatattaattgtgaattttctctataaatagatagcccacaaattgcattctacacac 23285300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 8267244 - 8267292
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagct 232  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  8267244 caaagtttatcacttattagttgtgaactttctctataaatagagagct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 23254584 - 23254648
Alignment:
Q  189 tttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 253  Q
    |||||||| ||||| || | ||||||||||||||||||||||| |||| ||||||||| ||||||    
T  23254584 tttctcacatattaattataaattttctctataaatagagagcacacaaagtgcattctacacac 23254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 26319593 - 26319667
Alignment:
Q  212 tttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||||||||| |||||||||||| |||||||  |||||| |||  ||||||||||| ||||| || |||||    
T  26319593 tttctctataaataaagagctcacacaatgcattcttcacaccaaaaaacacagttgatgcttcctgtgattttc 26319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 19727067 - 19726975
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    |||| ||||||| ||||||||| ||   |||||| ||||||||||||||||||||  ||||||   | |||||||||||||||||||| |||||    
T  19727067 caaaatttctcatttattagttgtgtgatttctcgataaatagagagctcacaca-agcattctggataccgaaattcacagttgatgcttcct 19726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Original strand, 26927153 - 26927192
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  26927153 acacaccgaaattcacagttgatgcttcctgtgtttttcc 26927192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 10135988 - 10135950
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  10135988 acacaccgaaattcacagttgatgcttcctgtgtttttc 10135950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 27307360 - 27307406
Alignment:
Q  139 tggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 185  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||||||    
T  27307360 tggaacatgtgtggatattgaggtaaaagactaaacacaaattccca 27307406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 27308280 - 27308342
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 246  Q
    |||||||||||   |||||||  |||||||||||||||||||||| ||||||| ||| |||||    
T  27308280 caaagtttctcttatattagtagtgaattttctctataaatagagtgctcacatagttcattc 27308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 8273059 - 8273108
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 185  Q
    ||||| |||||||||||||||| ||| |||| | ||||||||||||||||    
T  8273059 tgttgaaacatgtgtggaaattgagttaaaaaaataaacacaaattccca 8273108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 14204447 - 14204495
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagac--taaacacaaattc 182  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||||||    
T  14204447 tgttggaacatgtgtggaaattgagtaaaaagtctataaacacaaattc 14204495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 51040942 - 51040982
Alignment:
Q  247 cacacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||| ||||||||||||||||||||| || |||||||||    
T  51040942 cacacatcgaaattcacagttgatgttttctgtgtttttcc 51040982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8076755 - 8076649
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||    
T  8076755 tcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcatgtg 8076656  T
Q  281 tttttcc 287  Q
    |||||||    
T  8076655 tttttcc 8076649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 298
Target Start/End: Original strand, 9650349 - 9650466
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  9650349 tcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatgcttcctgtg 9650448  T
Q  281 tttttccctctctgctcc 298  Q
    ||||| ||||||| ||||    
T  9650449 ttttttcctctcttctcc 9650466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 27256942 - 27256836
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||| ||||| ||    
T  27256942 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtg 27256843  T
Q  281 tttttcc 287  Q
     ||||||    
T  27256842 cttttcc 27256836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 18426630 - 18426543
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  18426630 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 18426543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 40864752 - 40864858
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||| ||||| ||    
T  40864752 tcccaaagttactcacttattagttgtgaactttctctataaatagagagctcacacagtactttcgatacaccgaaattcacagttgatgcttcctgtg 40864851  T
Q  281 tttttcc 287  Q
     ||||||    
T  40864852 cttttcc 40864858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 20488651 - 20488563
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20488651 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 20488563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 8954655 - 8954746
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||  || ||||||||| |||||||||    
T  8954655 ttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttgatg 8954746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 16459772 - 16459875
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  16459772 ccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 16459871  T
Q  283 tttc 286  Q
    ||||    
T  16459872 tttc 16459875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 45169322 - 45169409
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  45169322 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacaccgaaattcacagttgat 45169409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 20485288 - 20485202
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20485288 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 20485202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 14928027 - 14928130
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  14928027 ccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 14928126  T
Q  283 tttc 286  Q
    ||||    
T  14928127 tttc 14928130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 15351493 - 15351596
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  15351493 ccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 15351592  T
Q  283 tttc 286  Q
    ||||    
T  15351593 tttc 15351596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 9008863 - 9008789
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||    
T  9008863 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgcattccacacacc 9008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 838820 - 838925
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||   || ||||||||||| ||||||| ||||| |    
T  838820 ttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatgcttcctgt 838919  T
Q  280 gttttt 285  Q
    ||||||    
T  838920 gttttt 838925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 1204000 - 1204105
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||   || ||||||||||| ||||||| ||||| |    
T  1204000 ttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatgcttcctgt 1204099  T
Q  280 gttttt 285  Q
    ||||||    
T  1204100 gttttt 1204105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 47102203 - 47102138
Alignment:
Q  222 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  47102203 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcc 47102138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 29727211 - 29727299
Alignment:
Q  199 attagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||||||||||||| || ||||||    
T  29727211 attagttgtgaattttctctataaatagagagctcacacggtgcattctggacaccaaaattcacagttgatgtttcctgtgcttttcc 29727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 14259709 - 14259606
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||   ||||||||||||||||| ||||| || |    
T  14259709 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgatgcttcctgtgct 14259610  T
Q  283 tttc 286  Q
    ||||    
T  14259609 tttc 14259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 36477674 - 36477577
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgt 281  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||       ||||||||||||||||||||||| ||||| |||    
T  36477674 cccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatg-------cacaccgaaattcacagttgatgcttcctgtgt 36477582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 845996 - 846093
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| | || ||||||||||  ||||||| |||||    
T  845996 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcct 846093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 853373 - 853470
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| | || ||||||||||  ||||||| |||||    
T  853373 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcct 853470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 1211377 - 1211474
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| | || ||||||||||  ||||||| |||||    
T  1211377 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcct 1211474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 19096957 - 19096853
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccg-aaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||| |||||||||||||||| ||| | ||||    
T  19096957 caaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttgatgcttcatgtgtt 19096858  T
Q  283 tttcc 287  Q
    |||||    
T  19096857 tttcc 19096853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 32302542 - 32302439
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||| ||||||||||||||||| | || | |||||||||||| ||| || |||  |||||||| |||||||||||||||||||||||||||||| || |    
T  32302542 ccaaaatttctcacttattagttgtaaactatctctataaatatagaactgacatggtgcattctacacaccgaaattcacagttgatgtttcctgtgct 32302443  T
Q  283 tttc 286  Q
    ||||    
T  32302442 tttc 32302439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 10532221 - 10532295
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||  |||||||||||||||||    
T  10532221 ttcccaaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacacc 10532295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 19641004 - 19640914
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||  || | ||| | ||||||||||||||||||||||    
T  19641004 tcccaaagtttctcacttattagttgtgaactttctctataaatagagtgttcacattgttctttcgatacaccgaaattcacagttgatg 19640914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 10499494 - 10499566
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||    |||||||||||||||||    
T  10499494 cccaaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10499566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 10504523 - 10504595
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||    |||||||||||||||||    
T  10504523 cccaaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 11017473 - 11017557
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttg 268  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| || | |||| ||||| |  ||||||||||||||||||    
T  11017473 caaagtttctcacttattagttgtgaattttctatataaatagagaggtcgcgcagtacattctatccaccgaaattcacagttg 11017557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 13343817 - 13343891
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| || ||||   | |||||||||||||||    
T  13343817 ttcccaaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacacc 13343891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 9649844 - 9649893
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9649844 tgttggaacatgtgtggaaattgagttaaaagactaaacacaaattccca 9649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 16580932 - 16580844
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    |||||||||||||||||||| || | || | || | |||||||| || |||||||||||||||  ||||| ||||||||||||||||||    
T  16580932 ccaaagtttctcacttattaattgtaaactatcccaataaatagggaactcacacagtgcattgtacacaacgaaattcacagttgatg 16580844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 2629353 - 2629290
Alignment:
Q  189 tttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacaca 252  Q
    |||||||| |||||||| | ||||||||||||||||| |||||||||| ||| |||||||||||    
T  2629353 tttctcacatattagttgtaaattttctctataaatatagagctcacatagttcattccacaca 2629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 47102742 - 47102692
Alignment:
Q  136 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  47102742 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 47102692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 1043922 - 1043847
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||||||||||||| ||||| || ||||||||||||||||||| |||||| ||| | | |||||  ||||||||||    
T  1043922 ccaaagtttctcacatattaattgtgaattttctctataaataaagagctgacataattcattctgcacaccgaaa 1043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 11297455 - 11297381
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||  || ||||  |||  ||||||||||||||||    
T  11297455 caaagtttctcacatattagttgtgatttttctctataaataggtagatcacgtagtttattccacacaccgaaa 11297381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 15566081 - 15566012
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacac 251  Q
    |||| |||||||||||| |||||||| ||| |||||| |||||||  |||||||| ||||| ||||||||||    
T  15566081 ttccaaaagtttctcacatattagttgtgagttttctatataaat--agagctcatacagttcattccacac 15566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 26341870 - 26341831
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  26341870 acacaccgaaattcacagttgatgcttcctgtgtttttcc 26341831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 43457097 - 43457143
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 182  Q
    |||||||||||| ||| ||||||||| |||||| |||||||||||||    
T  43457097 tgttggaacatgcgtgaaaattaagttaaaagaataaacacaaattc 43457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 10488686 - 10488759
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 253  Q
    |||||||||||||||   |||||||| ||| |||| | |||||||| |||||||| | ||| ||||||||||||    
T  10488686 ttcccaaagtttctcctatattagttgtgatttttttttataaatatagagctcatatagttcattccacacac 10488759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 10499011 - 10499056
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 181  Q
    |||||||||||||||||||||| | | ||||||||||||| |||||    
T  10499011 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatt 10499056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 10504040 - 10504085
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 181  Q
    |||||||||||||||||||||| | | ||||||||||||| |||||    
T  10504040 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatt 10504085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 13343311 - 13343356
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 181  Q
    |||||||||||||||||||||| | | ||||||| |||||||||||    
T  13343311 tgttggaacatgtgtggaaattgaattaaaagacaaaacacaaatt 13343356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 44509829 - 44509874
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttccctctct 293  Q
    |||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  44509829 acacactgaaattcacggttgatgtttcctgtgttttttcctctct 44509874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 23866924 - 23866884
Alignment:
Q  145 atgtgtggaaattaagtaaaaagactaaacacaaattccca 185  Q
    ||||||| ||||| ||| |||||||||||||||||||||||    
T  23866924 atgtgtgaaaattgagttaaaagactaaacacaaattccca 23866884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 298
Target Start/End: Original strand, 13521374 - 13521491
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  13521374 tcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatgcttcctgtg 13521473  T
Q  281 tttttccctctctgctcc 298  Q
    ||||| ||||||| ||||    
T  13521474 ttttttcctctcttctcc 13521491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 3997451 - 3997557
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||| ||||| ||    
T  3997451 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatattgctttacacacaccgaaattcacagttgatgcttcctgtg 3997550  T
Q  281 tttttcc 287  Q
    |||||||    
T  3997551 tttttcc 3997557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 7902500 - 7902606
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||| ||    
T  7902500 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacacacaccgaaattcacatttgatgcttcctgtg 7902599  T
Q  281 tttttcc 287  Q
     ||||||    
T  7902600 cttttcc 7902606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 15225871 - 15225765
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |    
T  15225871 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttgatgcttcctgt 15225772  T
Q  280 gtttttc 286  Q
    | |||||    
T  15225771 gcttttc 15225765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 47575361 - 47575277
Alignment:
Q  187 agtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  47575361 agtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacaccgaaattcaaagttgatg 47575277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 31297884 - 31297974
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31297884 tcccaaagtttctcacttattagttgtgaactctctctataaatagagagctcacacagtgcattccatacaccgaaattcacaattgatg 31297974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 34561129 - 34561023
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||| ||||| ||    
T  34561129 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtg 34561030  T
Q  281 tttttcc 287  Q
     ||||||    
T  34561029 cttttcc 34561023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 12488501 - 12488414
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  12488501 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 12488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 14868456 - 14868563
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||| ||||| |    
T  14868456 ttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgt 14868555  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  14868556 gcttttcc 14868563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 14877478 - 14877371
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||| ||||| |    
T  14877478 ttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgt 14877379  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  14877378 gcttttcc 14877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 10713643 - 10713540
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||| ||||||| | |||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  10713643 ccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10713544  T
Q  283 tttc 286  Q
    ||||    
T  10713543 tttc 10713540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 10927413 - 10927310
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||| ||||||| | |||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  10927413 ccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10927314  T
Q  283 tttc 286  Q
    ||||    
T  10927313 tttc 10927310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 14899004 - 14899095
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||   || |||||||||||||||||||    
T  14899004 ttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14899095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 15011207 - 15011310
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||| || |    
T  15011207 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgct 15011306  T
Q  283 tttc 286  Q
    ||||    
T  15011307 tttc 15011310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 14953451 - 14953533
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 14953533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 25690692 - 25690610
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 25690610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 8660791 - 8660898
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||  ||||||||||||  |||||||||||| |||||||||||||||||||||||| |  ||||||||| |||||||||||||| ||||| |    
T  8660791 ttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcacacagtgcagtatacacaccgagattcacagttgatgcttcctgt 8660890  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  8660891 gcttttcc 8660898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 9185072 - 9185179
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||   || |||||||||| |||||||| ||||| |    
T  9185072 ttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttgatgattcctgt 9185171  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  9185172 gcttttcc 9185179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 9190937 - 9191044
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||    || |||||||||| |||||||| ||||| |    
T  9190937 ttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttgatgattcctgt 9191036  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  9191037 gcttttcc 9191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 41817455 - 41817381
Alignment:
Q  213 ttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||    
T  41817455 ttctctgtaaatagagagctcacacagtgcattctacacaccgaaattcacagttgatgcttcttgtgtttttcc 41817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 26034894 - 26034799
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttc 275  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   || | ||||| |||||| ||||||||    
T  26034894 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccctgaaatacacagtcgatgtttc 26034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 39320267 - 39320173
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttc 275  Q
    |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||| | ||||| ||| ||||||||| |  |||||||||||    
T  39320267 ttcccaaa-tttctcacttattagttgtgaactttcactataaatagagagctcacacaattcattcgacaaaccgaaatttaacgttgatgtttc 39320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 13520869 - 13520918
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 185  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  13520869 tgttggaacatgtgtggaaattgagttaaaagactaaacacaaattccca 13520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 52742616 - 52742684
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacaca 252  Q
    |||| |||||| | |||||||| | |||||||||||||||||||||||||||| ||| |||||||||||    
T  52742616 caaaatttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttcattccacaca 52742684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 18023276 - 18023221
Alignment:
Q  231 ctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||| || |||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttc 18023221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 32545579 - 32545533
Alignment:
Q  190 ttctcacttattagttttgaattttctctataaatagagagctcaca 236  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  32545579 ttctcacatattagttgcgaattttctctataaatagagagctcaca 32545533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 26188056 - 26188129
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 253  Q
    |||| |||||||||||| |||||||| ||||||  || |||||||||||| |||||  ||||||||||| ||||    
T  26188056 ttcctaaagtttctcacatattagttgtgaattaactatataaatagagaactcacgtagtgcattccagacac 26188129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 55073847 - 55073774
Alignment:
Q  185 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||||||| ||  |||||||| ||||||||||||||||||||||| |||||  ||| ||||  |||||||||||    
T  55073847 aaagtttcacatatattagttgtgaattttctctataaatagagatctcacgtagttcattatacacaccgaaa 55073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 43477408 - 43477452
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaataga 227  Q
    ||||||||| |||||||||| || |||||||||||||||||||||    
T  43477408 ccaaagtttatcacttattaattgtgaattttctctataaataga 43477452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 5270856 - 5270894
Alignment:
Q  248 acacaccgaaattcacagttgatgtttcctatgtttttc 286  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  5270856 acacaccgaaattcacagttgatgcttcctgtgtttttc 5270894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 39320768 - 39320722
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 182  Q
    |||||||||||||||||||||| ||| |||||| |||| ||||||||    
T  39320768 tgttggaacatgtgtggaaattgagttaaaagattaaatacaaattc 39320722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 30970 - 30867
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| |||||||| |    
T  30970 ccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatgcttcctatgct 30871  T
Q  283 tttc 286  Q
    ||||    
T  30870 tttc 30867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 121269 - 121166
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| |    
T  121269 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctatgct 121170  T
Q  283 tttc 286  Q
    ||||    
T  121169 tttc 121166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 47362 - 47468
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  47362 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 47461  T
Q  281 tttttcc 287  Q
     ||||||    
T  47462 cttttcc 47468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 52306 - 52412
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  52306 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 52405  T
Q  281 tttttcc 287  Q
     ||||||    
T  52406 cttttcc 52412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 30390 - 30284
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||    
T  30390 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttgatgcttcctat 30291  T
Q  280 gtttttc 286  Q
    | |||||    
T  30290 gcttttc 30284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 71838 - 71740
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa-ttcacagttgatgtttcct 277  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||    
T  71838 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgatgcttcct 71740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 10367 - 10470
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  10367 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10466  T
Q  283 tttc 286  Q
    ||||    
T  10467 tttc 10470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 7580 - 7486
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  7580 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcct 7486  T

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Target: scaffold0061 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 49373 - 49479
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||| | ||||| ||    
T  49373 tcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacgcttcctgtg 49472  T
Q  281 tttttcc 287  Q
    |||||||    
T  49473 tttttcc 49479  T

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Target: scaffold0017 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 149261 - 149155
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||| | ||||| ||    
T  149261 tcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacgcttcctgtg 149162  T
Q  281 tttttcc 287  Q
    |||||||    
T  149161 tttttcc 149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 10817 - 10904
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  10817 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10904  T

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Target: scaffold0157 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 31976 - 32063
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  31976 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 32063  T

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Target: scaffold0141 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 13403 - 13490
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  13403 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 13490  T

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Target: scaffold0132 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 24684 - 24791
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  24684 ttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgattcctgt 24783  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  24784 gcttttcc 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 21377 - 21464
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  21377 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 21464  T

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Target: scaffold0011 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 127106 - 127003
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || |    
T  127106 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 127007  T
Q  283 tttc 286  Q
    ||||    
T  127006 tttc 127003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 35093 - 35199
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    |||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||| ||    
T  35093 tcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcacacagtgctttcgatacaccgaaattcacagttgatgcttcctgtg 35192  T
Q  281 tttttcc 287  Q
     ||||||    
T  35193 cttttcc 35199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 570 - 466
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgt 281  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   | |||||||||||||||||||| ||||| |||    
T  570 cccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatgcttcctgtgt 471  T
Q  282 ttttc 286  Q
    |||||    
T  470 ttttc 466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 12359 - 12447
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12359 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 12447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 14868 - 14956
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14868 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 14956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 629 - 725
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    ||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  629 tcccaaagtttctcacttattagttatgaactttctctacatatagagagctcacacagtgctttcaatacaccgaaattcacagttgatgcttcct 725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 81264 - 81157
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| ||||| |    
T  81264 ttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatgattcctgt 81165  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  81164 gcttttcc 81157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 64866 - 64775
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||| | | |||| |||||||||||||||||||    
T  64866 ttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatg 64775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 22010 - 21907
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    |||||||||||||||||| |||| | || | |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||| ||||| ||||    
T  22010 ccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgcattctacacactgaaattcacagttgatgcttcctgtgtt 21911  T
Q  283 tttc 286  Q
    ||||    
T  21910 tttc 21907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 193655 - 193762
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  193655 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttgatgcttcctgt 193754  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  193755 gcttttcc 193762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 187972 - 188075
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    |||||||||||||| ||| |||| |||| |||||||||||||| || | ||||||| |||||||   || ||||||| ||||||||||| ||||| || |    
T  187972 ccaaagtttctcacctatcagttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatgcttcctgtgct 188071  T
Q  283 tttc 286  Q
    ||||    
T  188072 tttc 188075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 1186 - 1104
Alignment:
Q  188 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 59131 - 59025
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 280  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| | |||||| ||||| ||    
T  59131 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgctttccatacaccgaaattcataattgatgcttcctgtg 59032  T
Q  281 tttttcc 287  Q
     ||||||    
T  59031 cttttcc 59025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 63333 - 63284
Alignment:
Q  181 tcccaaagtttctcacttattagttttgaattttctctataaatagagag 230  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  63333 tcccaaagtttctcacttattagttgtgaactttctctataaatagagag 63284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 19610 - 19707
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 277  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| |||||    
T  19610 ttcctaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcct 19707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 3735 - 3842
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 279  Q
    |||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  3735 ttcctaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatgcttcctgt 3834  T
Q  280 gtttttcc 287  Q
    | ||||||    
T  3835 gcttttcc 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 35402 - 35489
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 270  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  35402 ccaaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 35489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 5273 - 5375
Alignment:
Q  184 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgttt 283  Q
    |||||||||||||||||||||| | || | || ||||||||||||| |||||||||||||| | |||||||||||||||||||||||| ||||| || ||    
T  5273 caaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcatcctacacaccgaaattcacagttgatgcttcctgtgctt 5372  T
Q  284 ttc 286  Q
    |||    
T  5373 ttc 5375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 7091 - 7003
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 271  Q
    ||||||||||| ||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  7091 ccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcatagttgatg 7003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 5877 - 5831
Alignment:
Q  136 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 182  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  5877 tgttggaacatgtgtggaaattgagttaaaatactaaacacaaattc 5831  T

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Target: scaffold0292 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 7870 - 7767
Alignment:
Q  183 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtt 282  Q
    |||||||||||| |||||||||| | || | |||||||||||||||| |||||||||||||||| |||||| |||||||||| || ||| ||||| || |    
T  7870 ccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacacagaaattcacaatttatgcttcctgtgat 7771  T
Q  283 tttc 286  Q
    ||||    
T  7770 tttc 7767  T

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Target: scaffold0008 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 256518 - 256444
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 254  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||  ||||| |||||||| ||||||||    
T  256518 ttcccaaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacacc 256444  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 257838 - 257801
Alignment:
Q  145 atgtgtggaaattaagtaaaaagactaaacacaaattc 182  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  257838 atgtgtggaaattgagttaaaagactaaacacaaattc 257801  T

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Target: scaffold0004 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 199894 - 199791
Alignment:
Q  182 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgt 281  Q
    ||||| ||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||     |||||||||||||||||||| ||||| ||     
T  199894 cccaatgtttctcacctattagttgcgaagtttctctataaatagagagctcacacaatgcattc--tggaccgaaattcacagttgatgattcctgtgc 199797  T
Q  282 ttttcc 287  Q
    ||||||    
T  199796 ttttcc 199791  T

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Target: scaffold0932 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 1027 - 1105
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||  || ||||  ||| |||||||||||||||||    
T  1027 ttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacgtagttcattccacacaccgaaa 1105  T

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Target: scaffold0478 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 8293 - 8215
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||  || ||||  ||| |||||||||||||||||    
T  8293 ttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacctagttcattccacacaccgaaa 8215  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 22372 - 22320
Alignment:
Q  223 atagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttc 275  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  22372 atagagaactcacacagtgcattctacacaccgaaattcacagttgatttttc 22320  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 287
Target Start/End: Complemental strand, 22337 - 22274
Alignment:
Q  224 tagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgtttttcc 287  Q
    ||||||||||||||| |||||||   || ||||||||||||||||||| ||||| || ||||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtggttttcc 22274  T

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Target: scaffold0720 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 5939 - 6017
Alignment:
Q  180 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 258  Q
    |||| |||||||||||| |||||||| ||  ||||||||||||||||  || | ||  ||| |||||||||||||||||    
T  5939 ttccgaaagtttctcacatattagttgtgctttttctctataaataggtagattacgtagttcattccacacaccgaaa 6017  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 84120 - 84074
Alignment:
Q  136 tgttggaacatgtgtggaaatt-aagtaaaaagactaaacacaaatt 181  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||    
T  84120 tgttggaacatgtgtggaaattggattaaaaagactaaacacaaatt 84074  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 22644 - 22583
Alignment:
Q  192 ctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 253  Q
    |||||||||||||| | || | || ||||||||||||| ||| |||||||||||| ||||||    
T  22644 ctcacttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacac 22583  T

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