View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9019_low_15 (Length: 289)
Name: NF9019_low_15
Description: NF9019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9019_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 40044195 - 40043923
Alignment:
| Q |
1 |
ataatgaaccttccatgttaaacattctttaactagaaatgaacccacaaaatacagcttgataacatgacaacaataccattctctgtaaattgattct |
100 |
Q |
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| T |
40044195 |
ataatgaaccttccatgttaaacattctttaactagaaatgaacccacaaaatacagcttgataacatgacaacaataccattctctgtaaattgattct |
40044096 |
T |
|
| Q |
101 |
aggcggtttcaaaacaacattatctccaacatgttcacattagtgttcagcctacccttctaattactttacatatatattgtaaagttgttattcaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
40044095 |
aggcggtttcaaaacaacattatctccaacatgttcacattagtgttcagcctacccttctaattactttacatagatattgtaaagttgttattcaaag |
40043996 |
T |
|
| Q |
201 |
acggtgattctgtaccaatatttactcatattgctgcaattatgagcaaaatcatcatgctgtataatgtaac |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40043995 |
acggtgattctgtaccaatatttactcatattgctgcaattatgagcaaaatcatcatgctgtataatgtaac |
40043923 |
T |
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