View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9021_low_12 (Length: 548)

Name: NF9021_low_12
Description: NF9021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9021_low_12
NF9021_low_12
[»] chr1 (66 HSPs)
chr1 (1-531)||(4445327-4445857)
chr1 (405-493)||(31517699-31517787)
chr1 (391-490)||(24915012-24915112)
chr1 (406-493)||(6292517-6292603)
chr1 (408-490)||(7941632-7941715)
chr1 (409-490)||(2295123-2295205)
chr1 (407-491)||(35925715-35925800)
chr1 (418-489)||(11941298-11941370)
chr1 (406-493)||(6262044-6262131)
chr1 (391-490)||(10744310-10744409)
chr1 (410-493)||(37593643-37593726)
chr1 (391-490)||(37811861-37811960)
chr1 (410-493)||(38170649-38170732)
chr1 (404-490)||(2777914-2778000)
chr1 (409-490)||(49938774-49938856)
chr1 (429-490)||(38001643-38001704)
chr1 (313-365)||(36070181-36070233)
chr1 (406-458)||(40943221-40943273)
chr1 (406-489)||(51929501-51929585)
chr1 (410-493)||(7262477-7262560)
chr1 (391-490)||(34290245-34290344)
chr1 (419-497)||(42757132-42757210)
chr1 (406-479)||(473188-473261)
chr1 (406-490)||(3233976-3234061)
chr1 (412-493)||(4868430-4868510)
chr1 (418-490)||(27820158-27820230)
chr1 (321-365)||(4256129-4256173)
chr1 (418-490)||(14443485-14443557)
chr1 (391-490)||(19389910-19390010)
chr1 (391-487)||(26779891-26779986)
chr1 (423-490)||(172538-172605)
chr1 (408-482)||(3887601-3887676)
chr1 (405-456)||(4622116-4622167)
chr1 (388-491)||(11211124-11211227)
chr1 (390-473)||(43338124-43338207)
chr1 (407-493)||(601066-601151)
chr1 (319-365)||(4549803-4549849)
chr1 (313-363)||(4700155-4700205)
chr1 (256-306)||(4700193-4700242)
chr1 (407-493)||(7218033-7218119)
chr1 (452-490)||(9572062-9572100)
chr1 (407-489)||(11695886-11695968)
chr1 (415-481)||(29635380-29635446)
chr1 (423-493)||(32515400-32515470)
chr1 (269-365)||(37841888-37841981)
chr1 (319-361)||(42336599-42336641)
chr1 (323-365)||(46252769-46252811)
chr1 (406-459)||(1565528-1565581)
chr1 (412-492)||(4920729-4920810)
chr1 (419-464)||(10854770-10854815)
chr1 (412-493)||(33723341-33723422)
chr1 (414-490)||(37617426-37617502)
chr1 (320-361)||(50319230-50319271)
chr1 (391-491)||(51695455-51695556)
chr1 (320-364)||(172665-172709)
chr1 (319-363)||(2462904-2462948)
chr1 (422-482)||(4549888-4549948)
chr1 (418-490)||(7119899-7119971)
chr1 (421-493)||(12477247-12477318)
chr1 (405-497)||(35058387-35058479)
chr1 (256-312)||(35058893-35058949)
chr1 (420-492)||(38578566-38578638)
chr1 (421-493)||(40413981-40414053)
chr1 (421-493)||(43420297-43420369)
chr1 (376-487)||(45975684-45975796)
chr1 (313-365)||(52286609-52286661)
[»] chr2 (56 HSPs)
chr2 (405-493)||(12313132-12313220)
chr2 (406-490)||(43279488-43279575)
chr2 (409-493)||(43529817-43529901)
chr2 (407-493)||(38809351-38809437)
chr2 (420-493)||(5902508-5902581)
chr2 (421-493)||(43530070-43530142)
chr2 (406-485)||(28677626-28677705)
chr2 (445-492)||(32837386-32837433)
chr2 (423-493)||(787373-787443)
chr2 (407-488)||(10567082-10567163)
chr2 (418-490)||(15757619-15757692)
chr2 (405-489)||(16451141-16451226)
chr2 (407-492)||(40158743-40158828)
chr2 (388-468)||(680509-680589)
chr2 (255-348)||(15288710-15288800)
chr2 (313-360)||(34054993-34055040)
chr2 (405-492)||(41041982-41042069)
chr2 (423-481)||(33503048-33503106)
chr2 (319-361)||(33576685-33576727)
chr2 (436-493)||(1801722-1801779)
chr2 (391-456)||(34652032-34652097)
chr2 (391-468)||(35379000-35379077)
chr2 (418-490)||(36534804-36534877)
chr2 (409-473)||(1647263-1647327)
chr2 (407-459)||(25790151-25790203)
chr2 (313-361)||(37053525-37053573)
chr2 (255-365)||(39567779-39567886)
chr2 (407-483)||(41817193-41817269)
chr2 (404-464)||(42907383-42907443)
chr2 (405-493)||(43199743-43199831)
chr2 (314-365)||(11393742-11393793)
chr2 (314-365)||(11410403-11410454)
chr2 (429-492)||(35485964-35486027)
chr2 (319-365)||(5133709-5133755)
chr2 (391-493)||(8017443-8017545)
chr2 (405-459)||(27663370-27663424)
chr2 (406-487)||(40279431-40279512)
chr2 (409-490)||(40682356-40682438)
chr2 (391-485)||(43984970-43985064)
chr2 (436-493)||(1318290-1318347)
chr2 (407-456)||(1939328-1939377)
chr2 (388-445)||(12464480-12464537)
chr2 (391-487)||(26143604-26143701)
chr2 (410-487)||(32106764-32106841)
chr2 (391-468)||(33941918-33941995)
chr2 (391-490)||(1625909-1626009)
chr2 (313-365)||(3673738-3673790)
chr2 (424-492)||(9478341-9478409)
chr2 (313-361)||(17952792-17952840)
chr2 (406-450)||(19333327-19333371)
chr2 (313-361)||(25609727-25609775)
chr2 (421-493)||(28039291-28039363)
chr2 (313-361)||(33197330-33197378)
chr2 (313-365)||(33267603-33267655)
chr2 (388-432)||(35539729-35539773)
chr2 (421-488)||(41812055-41812123)
[»] chr5 (48 HSPs)
chr5 (278-479)||(39105363-39105562)
chr5 (256-493)||(6593177-6593410)
chr5 (406-490)||(16457940-16458025)
chr5 (257-348)||(42573883-42573971)
chr5 (426-490)||(39248143-39248207)
chr5 (257-481)||(1618970-1619188)
chr5 (410-493)||(17258842-17258925)
chr5 (418-487)||(7808541-7808611)
chr5 (313-490)||(7674579-7674756)
chr5 (391-497)||(18857353-18857461)
chr5 (391-492)||(37611175-37611276)
chr5 (391-492)||(37787905-37788006)
chr5 (408-482)||(499701-499775)
chr5 (407-497)||(6587062-6587152)
chr5 (391-440)||(7999298-7999347)
chr5 (420-493)||(13264064-13264137)
chr5 (406-490)||(29925865-29925950)
chr5 (405-490)||(35445805-35445890)
chr5 (409-474)||(36542260-36542325)
chr5 (421-499)||(4855737-4855812)
chr5 (405-489)||(12459964-12460048)
chr5 (405-468)||(13604833-13604896)
chr5 (405-468)||(21768181-21768244)
chr5 (407-490)||(37526161-37526244)
chr5 (407-490)||(37690598-37690681)
chr5 (313-486)||(1464985-1465158)
chr5 (391-493)||(2568667-2568769)
chr5 (313-363)||(4014513-4014563)
chr5 (319-361)||(7096218-7096260)
chr5 (259-351)||(10771979-10772068)
chr5 (320-365)||(4855636-4855681)
chr5 (418-459)||(15406005-15406046)
chr5 (313-358)||(29588811-29588856)
chr5 (320-361)||(34690812-34690853)
chr5 (256-305)||(37914647-37914696)
chr5 (418-486)||(37954722-37954791)
chr5 (313-365)||(465885-465937)
chr5 (313-365)||(706394-706446)
chr5 (391-447)||(4014429-4014485)
chr5 (407-483)||(4619732-4619808)
chr5 (391-490)||(7984978-7985078)
chr5 (313-361)||(11054117-11054165)
chr5 (321-361)||(12407752-12407792)
chr5 (319-359)||(13224366-13224406)
chr5 (414-458)||(16863812-16863856)
chr5 (313-361)||(20982226-20982274)
chr5 (255-299)||(32927973-32928017)
chr5 (254-348)||(41059595-41059686)
[»] chr3 (56 HSPs)
chr3 (391-490)||(21367676-21367776)
chr3 (269-365)||(35127458-35127551)
chr3 (405-489)||(23808027-23808111)
chr3 (418-490)||(31365149-31365222)
chr3 (420-485)||(53762361-53762426)
chr3 (389-486)||(54837000-54837097)
chr3 (389-493)||(45541578-45541682)
chr3 (405-493)||(47513676-47513764)
chr3 (418-468)||(5391915-5391965)
chr3 (257-364)||(30574002-30574104)
chr3 (391-493)||(37273143-37273245)
chr3 (405-485)||(402508-402589)
chr3 (407-456)||(3044255-3044304)
chr3 (407-456)||(25925767-25925816)
chr3 (313-365)||(2128338-2128390)
chr3 (407-487)||(21574515-21574595)
chr3 (421-493)||(38971297-38971369)
chr3 (409-489)||(53952075-53952155)
chr3 (405-464)||(36139901-36139960)
chr3 (431-493)||(2304230-2304292)
chr3 (391-493)||(22667413-22667514)
chr3 (391-493)||(22724052-22724153)
chr3 (405-490)||(24085299-24085385)
chr3 (391-493)||(30573873-30573975)
chr3 (410-464)||(36101596-36101650)
chr3 (406-482)||(901948-902025)
chr3 (406-490)||(39980753-39980838)
chr3 (313-361)||(905061-905109)
chr3 (313-361)||(20669110-20669158)
chr3 (407-474)||(25453836-25453904)
chr3 (421-481)||(29427616-29427676)
chr3 (405-489)||(50952356-50952440)
chr3 (307-347)||(54194444-54194484)
chr3 (455-490)||(20257610-20257645)
chr3 (422-493)||(24624250-24624321)
chr3 (392-491)||(27896131-27896230)
chr3 (406-488)||(30443917-30444000)
chr3 (447-490)||(34637946-34637989)
chr3 (391-490)||(39602172-39602271)
chr3 (314-361)||(42039091-42039138)
chr3 (407-493)||(14548680-14548766)
chr3 (418-483)||(38902102-38902168)
chr3 (405-455)||(52619026-52619076)
chr3 (418-455)||(2128255-2128292)
chr3 (405-485)||(31403381-31403462)
chr3 (405-450)||(40665452-40665497)
chr3 (453-489)||(584118-584154)
chr3 (425-493)||(2152137-2152205)
chr3 (410-490)||(20194995-20195074)
chr3 (423-491)||(34707457-34707525)
chr3 (320-360)||(34759619-34759659)
chr3 (313-361)||(41028942-41028990)
chr3 (461-493)||(41057234-41057266)
chr3 (454-490)||(43046738-43046774)
chr3 (409-493)||(43115083-43115167)
chr3 (274-364)||(49465751-49465838)
[»] chr8 (49 HSPs)
chr8 (409-485)||(12851203-12851279)
chr8 (418-493)||(2487967-2488042)
chr8 (391-490)||(39551171-39551270)
chr8 (407-488)||(42215270-42215351)
chr8 (313-365)||(26215427-26215479)
chr8 (315-484)||(7514511-7514681)
chr8 (311-481)||(7646135-7646305)
chr8 (391-497)||(11569412-11569518)
chr8 (409-490)||(26771292-26771374)
chr8 (405-486)||(7918412-7918493)
chr8 (406-490)||(18133680-18133765)
chr8 (406-490)||(35643949-35644034)
chr8 (313-365)||(21653012-21653064)
chr8 (409-492)||(11415181-11415264)
chr8 (421-490)||(28763406-28763477)
chr8 (412-478)||(926505-926571)
chr8 (407-457)||(20672775-20672825)
chr8 (391-488)||(27028840-27028938)
chr8 (293-365)||(37444502-37444571)
chr8 (391-479)||(1930044-1930133)
chr8 (418-486)||(32840951-32841020)
chr8 (258-365)||(37353336-37353439)
chr8 (409-490)||(41606865-41606946)
chr8 (406-490)||(43045686-43045771)
chr8 (407-487)||(5088877-5088957)
chr8 (409-493)||(9700028-9700112)
chr8 (406-490)||(27754428-27754512)
chr8 (269-362)||(41442525-41442615)
chr8 (389-493)||(42215049-42215145)
chr8 (405-500)||(43504774-43504869)
chr8 (406-493)||(44236782-44236869)
chr8 (319-365)||(1112790-1112836)
chr8 (323-365)||(32976358-32976400)
chr8 (425-490)||(8629499-8629564)
chr8 (418-490)||(10758218-10758291)
chr8 (407-456)||(11185246-11185295)
chr8 (421-490)||(14949905-14949974)
chr8 (421-493)||(24558892-24558962)
chr8 (405-490)||(30918136-30918220)
chr8 (320-361)||(42597339-42597380)
chr8 (409-493)||(2458525-2458609)
chr8 (421-473)||(3254264-3254316)
chr8 (321-365)||(4558737-4558781)
chr8 (313-361)||(11119090-11119138)
chr8 (313-361)||(14482133-14482181)
chr8 (388-487)||(28784758-28784859)
chr8 (421-493)||(30191100-30191172)
chr8 (313-365)||(37152977-37153029)
chr8 (421-493)||(43569199-43569271)
[»] chr6 (29 HSPs)
chr6 (391-490)||(20368142-20368241)
chr6 (419-493)||(769175-769249)
chr6 (405-481)||(31624113-31624190)
chr6 (421-493)||(33887869-33887941)
chr6 (410-468)||(28641733-28641791)
chr6 (385-458)||(6647390-6647463)
chr6 (428-493)||(27595526-27595591)
chr6 (409-493)||(35070426-35070510)
chr6 (407-493)||(32171342-32171428)
chr6 (430-490)||(9559383-9559444)
chr6 (255-365)||(264248-264354)
chr6 (313-365)||(9093643-9093695)
chr6 (428-492)||(27693399-27693463)
chr6 (418-473)||(1575931-1575986)
chr6 (408-479)||(32205986-32206057)
chr6 (405-455)||(4420666-4420716)
chr6 (407-493)||(8420156-8420242)
chr6 (420-482)||(10616683-10616745)
chr6 (432-490)||(26559201-26559259)
chr6 (416-493)||(2456976-2457052)
chr6 (407-492)||(2460111-2460196)
chr6 (419-492)||(8035108-8035181)
chr6 (418-473)||(1575786-1575842)
chr6 (313-365)||(9559628-9559680)
chr6 (408-456)||(9667981-9668029)
chr6 (319-359)||(10452453-10452493)
chr6 (429-477)||(10657449-10657497)
chr6 (410-458)||(13908491-13908539)
chr6 (445-493)||(33116647-33116695)
[»] chr7 (40 HSPs)
chr7 (405-491)||(25670547-25670633)
chr7 (406-490)||(21568456-21568541)
chr7 (391-490)||(33678789-33678889)
chr7 (405-500)||(3836635-3836729)
chr7 (406-490)||(19022546-19022631)
chr7 (411-493)||(13960682-13960764)
chr7 (407-489)||(22387859-22387941)
chr7 (391-456)||(529384-529449)
chr7 (418-490)||(19302524-19302597)
chr7 (391-484)||(22551373-22551466)
chr7 (414-487)||(24967093-24967166)
chr7 (257-313)||(7612337-7612393)
chr7 (419-471)||(30316999-30317051)
chr7 (421-493)||(33894666-33894738)
chr7 (255-365)||(40009347-40009453)
chr7 (321-361)||(49060479-49060519)
chr7 (314-361)||(5373157-5373204)
chr7 (418-473)||(15740390-15740445)
chr7 (391-490)||(25596042-25596141)
chr7 (418-493)||(30535599-30535674)
chr7 (409-490)||(17248580-17248661)
chr7 (407-493)||(23214880-23214966)
chr7 (407-483)||(425792-425869)
chr7 (444-493)||(8094368-8094417)
chr7 (406-478)||(11619131-11619204)
chr7 (421-490)||(36598318-36598387)
chr7 (418-474)||(39967956-39968013)
chr7 (312-361)||(42656445-42656494)
chr7 (324-365)||(43152989-43153030)
chr7 (448-489)||(48140270-48140311)
chr7 (255-307)||(12110252-12110304)
chr7 (418-473)||(15740534-15740590)
chr7 (436-492)||(27508292-27508348)
chr7 (407-447)||(28165116-28165156)
chr7 (445-493)||(29574584-29574632)
chr7 (314-358)||(33894555-33894599)
chr7 (391-490)||(34035926-34036026)
chr7 (257-305)||(34672893-34672941)
chr7 (313-361)||(46213734-46213782)
chr7 (391-435)||(47130802-47130846)
[»] chr4 (53 HSPs)
chr4 (391-493)||(2996582-2996684)
chr4 (388-490)||(28300261-28300363)
chr4 (269-364)||(42641721-42641813)
chr4 (391-493)||(50742795-50742897)
chr4 (275-364)||(2987085-2987171)
chr4 (420-491)||(7368015-7368086)
chr4 (429-492)||(21043195-21043258)
chr4 (391-490)||(23819098-23819197)
chr4 (406-493)||(42461275-42461362)
chr4 (405-490)||(1706645-1706731)
chr4 (421-479)||(17223009-17223067)
chr4 (407-497)||(22236060-22236150)
chr4 (319-361)||(25487636-25487678)
chr4 (374-468)||(37864336-37864430)
chr4 (405-474)||(18782744-18782813)
chr4 (408-497)||(32769587-32769676)
chr4 (418-490)||(49202681-49202754)
chr4 (406-490)||(54426067-54426152)
chr4 (445-493)||(1408279-1408327)
chr4 (313-361)||(6364080-6364128)
chr4 (421-493)||(39178225-39178297)
chr4 (391-493)||(47800632-47800731)
chr4 (407-490)||(6987703-6987786)
chr4 (407-490)||(29388809-29388892)
chr4 (414-485)||(43932467-43932538)
chr4 (418-513)||(48719331-48719425)
chr4 (419-490)||(56249561-56249632)
chr4 (313-351)||(2980572-2980610)
chr4 (391-493)||(4798525-4798627)
chr4 (409-490)||(13126537-13126619)
chr4 (407-493)||(20936188-20936274)
chr4 (405-467)||(30066751-30066813)
chr4 (319-365)||(30338679-30338725)
chr4 (391-480)||(35571602-35571692)
chr4 (436-485)||(1554975-1555024)
chr4 (418-490)||(21731617-21731690)
chr4 (406-490)||(25904184-25904269)
chr4 (407-492)||(27123312-27123397)
chr4 (406-490)||(39603131-39603216)
chr4 (422-490)||(49939912-49939981)
chr4 (418-490)||(54069378-54069451)
chr4 (320-365)||(54392906-54392950)
chr4 (313-365)||(7601690-7601742)
chr4 (409-489)||(11264328-11264408)
chr4 (274-348)||(17751226-17751297)
chr4 (461-493)||(22471353-22471385)
chr4 (451-487)||(23319923-23319959)
chr4 (313-365)||(23503490-23503542)
chr4 (313-361)||(47970249-47970297)
chr4 (429-493)||(50298563-50298626)
chr4 (421-493)||(50799989-50800061)
chr4 (321-361)||(51044550-51044590)
chr4 (442-490)||(52172785-52172833)
[»] scaffold0221 (1 HSPs)
scaffold0221 (414-459)||(2798-2843)
[»] scaffold0590 (1 HSPs)
scaffold0590 (313-361)||(1165-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (313-361)||(2762-2810)
[»] scaffold0004 (1 HSPs)
scaffold0004 (421-473)||(98619-98671)
[»] scaffold0019 (1 HSPs)
scaffold0019 (313-363)||(104223-104273)


Alignment Details
Target: chr1 (Bit Score: 479; Significance: 0; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 1 - 531
Target Start/End: Original strand, 4445327 - 4445857
Alignment:
Q  1 acctgagtattaaaacacaaatataaatatacaatcaaaaaatttcaccaagatctggtttcctaaaatgctgtagaatctacattactccaaacttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4445327 acctgagtattaaaacacaaatataaatatacaatcaaaaaatttcaccaagatctggtttcctaaaatgctgtagaatctagattactccaaacttcaa 4445426  T
Q  101 cataatgaccgaacataattatattgagacatttgctaaaaacagcaatcgctgttcattgcaacaaaattgttaaggcttctaagaaaaagtgaaagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4445427 cataatgaccgaacataattatattgagacatttgctaaaaacagcaatcgctgttcattgcaacaaaattgttaaggcttctaagtaaaagtgaaagaa 4445526  T
Q  201 tgcatgacaacaaatggatagagtctatatgtaagttgtttggaatttcctacagccctgtttgaattaacagcttaatttgcagcttgtaacataagca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4445527 tgcatgacaacaaatggatagagtctatatgtaagttgtttggaatttcctacagccctgtttaaattaacagcttaatttgcagcttgtaacataagca 4445626  T
Q  301 cttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaannnnnnnngcataagccacaatctattttcataag 400  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  4445627 cttatgatgataataagcacttatgtataggctatttctataacaaaaaatacaataaagttaaattttttttgcataagccacaatctattttcataag 4445726  T
Q  401 cagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggttaagc 500  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4445727 ctgacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtgcttaagc 4445826  T
Q  501 tcaactaagtcaaacctaacagatcctaaat 531  Q
    |||||||||||||||| ||||||||||||||    
T  4445827 tcaactaagtcaaaccaaacagatcctaaat 4445857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 493
Target Start/End: Complemental strand, 31517787 - 31517699
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||| || || || ||| |||| ||||||||||||||||||||||||    
T  31517787 cttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtg 31517699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 24915112 - 24915012
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctg-aacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    ||||||||||| | |||||||| ||||||||||||||||||||| ||||| || || |||| ||||| || ||||||||||| |||||||||| ||||||    
T  24915112 ttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgttttcataaattgtcccaaacagcctcaca 24915013  T
Q  490 a 490  Q
    |    
T  24915012 a 24915012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 6292517 - 6292603
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||| | ||||||||||||||| ||||| |||||    
T  6292517 ttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctg-ttttaaaaattctcccaaacaatctcaaaagtg 6292603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 408 - 490
Target Start/End: Original strand, 7941632 - 7941715
Alignment:
Q  408 ggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||| ||| ||||||||||||||||| |||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||    
T  7941632 ggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaaacagtctcacaa 7941715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 490
Target Start/End: Original strand, 2295123 - 2295205
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||||||||||||||||||| | ||||| |||| || || |||||||| |||||||| |||||||||||||||||||||    
T  2295123 gagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaa 2295205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 491
Target Start/End: Original strand, 35925715 - 35925800
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaatt-ctcccaaacagtctcacaag 491  Q
    ||||||| || || |||||||||||||||||||| ||||||||| |||||||| |||||||| || |||||| |||||||| ||||    
T  35925715 tggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttcctcccagacagtctctcaag 35925800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 11941298 - 11941370
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||| |||||||||||| |||||| |||||||||||  ||||||||  |||||||||||||||||||    
T  11941298 tgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctcaca 11941370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 6262044 - 6262131
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| ||||| || | ||||||  |||   |||||||||||||||||    
T  6262044 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttctcataagctcttgtaaacagtctcacaagtg 6262131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 10744310 - 10744409
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||| | ||| |||| ||| | |||||||| |||||||||||| ||||||||  |||||||| ||||| || |||||||||||  ||||||||    
T  10744310 ttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctcccaaactctctcacaa 10744409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 493
Target Start/End: Complemental strand, 37593726 - 37593643
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||||| |||||||||||| ||||||||| ||||| ||  ||||| | || ||||||||||||| |||||||    
T  37593726 agagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtctaacaagtg 37593643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 37811861 - 37811960
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   | |||||||||  || ||||||||||||||||| || ||||||||| |||||||| |||||||| ||||| ||| |||| ||||||    
T  37811861 ttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctctcaaccagtatcacaa 37811960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 493
Target Start/End: Complemental strand, 38170732 - 38170649
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||  ||||| ||| |||||||| ||| ||||||||| |||||||| ||||||||  |||||||| ||||||||||||||    
T  38170732 agagcttaggaaaacaagctgaaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctcacaagtg 38170649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 490
Target Start/End: Original strand, 2777914 - 2778000
Alignment:
Q  404 acttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||| ||| |||||||||| ||||||| |||| |||| | || ||||| || |||||||| |||||| ||||||||||||||    
T  2777914 acttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagttctcctaaacagtctcacaa 2778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 490
Target Start/End: Original strand, 49938774 - 49938856
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||| ||||||||||||||||| ||||| |||| || || |||||||| |||||||| |||||||||||| ||||||||    
T  49938774 gagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaacaatctcacaa 49938856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 490
Target Start/End: Original strand, 38001643 - 38001704
Alignment:
Q  429 tgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||| ||| |||||| || |||||||| |||||||| |||||||||||||||||||||    
T  38001643 tgaaaacaacttatgaacaggtcataagctgttttcataagttctcccaaacagtctcacaa 38001704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 36070181 - 36070233
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||||||||||||| |||||||| |||||||||| ||| ||||||||||||    
T  36070181 ataagcgcttatgtatgggctatttttataacaaaagataaaataaagttaaa 36070233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 40943273 - 40943221
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagct 458  Q
    |||||||||||||  ||||||||||||||||| || |||||||||||||||||    
T  40943273 ttggagagcttgtagaaataagttgaaaacagtttatgaacatgttataagct 40943221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 489
Target Start/End: Complemental strand, 51929585 - 51929501
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    ||||||| ||| || |||||||||||||| ||||| |||| || || |||||||| |||||| |||||||||||||| |||||||    
T  51929585 ttggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcatgaattctcccaaacaatctcaca 51929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 493
Target Start/End: Complemental strand, 7262560 - 7262477
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||| ||||||| |||||||||||| ||||||||| | |||||| ||| ||||  ||||| |||| |||||| |||||    
T  7262560 agagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctctccaaaaccgtctcaaaagtg 7262477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 34290245 - 34290344
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||| ||| ||| |||||||||| |||||||| ||| |||| |||| |||||||  ||| ||||||||||||||| ||| ||||||    
T  34290245 ttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaattctcccaaatagtttcacaa 34290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 497
Target Start/End: Complemental strand, 42757210 - 42757132
Alignment:
Q  419 gaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggtta 497  Q
    ||||| ||| |||||||||||| |||| |||| ||||| || |||| ||| |||| ||||||||| |||||||||||||    
T  42757210 gaaaaaaagctgaaaacagcttatgaatatgtaataagttgttttcgtaagttcttccaaacagtgtcacaagtggtta 42757132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 479
Target Start/End: Original strand, 473188 - 473261
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaa 479  Q
    ||||||| ||| ||||||||||||||||| ||||| |||| ||  ||||||||  |||||||| ||||||||||    
T  473188 ttggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtataagcttttttcataagttctcccaaa 473261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 3234061 - 3233976
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||||| ||||| | ||| |||| | ||||||||| || |||||||| ||||||| |||||||||||||    
T  3234061 ttggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcataagttctccctaacagtctcacaa 3233976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 493
Target Start/End: Original strand, 4868430 - 4868510
Alignment:
Q  412 agcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||| || |||||||||||||||| ||| |  |||||| ||||| || ||||||||| |||| ||||||||||||||||||    
T  4868430 agcttatgtaaataagttgaaaacaacttattgacatgtcataagttg-tttcataaactctctcaaacagtctcacaagtg 4868510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 27820230 - 27820158
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| |||||| ||||| |||||| ||| |||||||  ||||||||||||||| ||||||||||||||    
T  27820230 tgaaaataagctgaaaatagcttatgaacaatgtaataagctt-tttcataaattctccaaaacagtctcacaa 27820158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 4256173 - 4256129
Alignment:
Q  321 ttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaa 4256129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 14443485 - 14443557
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| |||||||| |||  |||||||||| |||||| |||||||||||||  || | ||||||||||    
T  14443485 tgaaaataaggtgaaaacaacttacgaacatgttaaaagctgttttcataaattctttcatatagtctcacaa 14443557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 19389910 - 19390010
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataag-ttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   ||||||||||||||||||||||| |  |||||| ||| ||||||| | ||||| |  |||||||  |||||||||||||| |||||    
T  19389910 ttttcataagctatcttggagagcttgtgaaaataagctaaaaaacaacttatgaacatatcataagtttttttcatacgttctcccaaacagtgtcaca 19390009  T
Q  490 a 490  Q
    |    
T  19390010 a 19390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 487
Target Start/End: Complemental strand, 26779986 - 26779891
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||||   |||| ||| ||| ||||||||||||||||||| ||| || ||  || ||||| || ||||| |||||||||||||||||||||    
T  26779986 ttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatgtacg-gtcataaggtgttttcagaaattctcccaaacagtctca 26779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 490
Target Start/End: Complemental strand, 172605 - 172538
Alignment:
Q  423 ataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| |||||||| | ||||||||  |||| ||| ||||||||||||||||| ||||| ||||||    
T  172605 ataagttaaaaacagcctatgaacatgccataaactgttttcataaattctcccagacagtgtcacaa 172538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 482
Target Start/End: Complemental strand, 3887676 - 3887601
Alignment:
Q  408 ggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacag 482  Q
    ||||| ||| |||||||||||| |||||||||| ||||| |||| ||||| || |||||||| |||| ||||||||    
T  3887676 ggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaaacag 3887601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 456
Target Start/End: Original strand, 4622116 - 4622167
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    ||||||||||||||||||||||| | |||||||||| || |||||| |||||    
T  4622116 cttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 11211124 - 11211227
Alignment:
Q  388 ctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||||||| |   ||||||| || || ||||||||| |||||| ||| || ||||| |||||| |  ||||||||||| |||||| |||||||     
T  11211124 ctattttcataagctgttatggagagtttatggaaataagttaaaaacaacttatggacatgctataagttattttcataaattttcccaatcagtctcg 11211223  T
Q  488 caag 491  Q
    ||||    
T  11211224 caag 11211227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 473
Target Start/End: Original strand, 43338124 - 43338207
Alignment:
Q  390 attttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattct 473  Q
    ||||||||||||  || |||||||||| |||||||| | |||||| || || ||||||||| |||||||| || ||||| ||||    
T  43338124 attttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataagctgtttccataagttct 43338207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 493
Target Start/End: Original strand, 601066 - 601151
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| || |||||||||| |||||| |||||   ||||||| ||||| || |||| || ||||||||||||||||||| |||||    
T  601066 tggagagtttatgaaaataagctgaaaatagcttac-aacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtg 601151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 4549803 - 4549849
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||| | |||||||||||||||||| ||| ||||||||||||    
T  4549803 gcttatgtacaagctatttctataacaaaagataaaataaagttaaa 4549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 4700205 - 4700155
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagtta 363  Q
    |||||| |||||||| | |||||||||||||||||| ||| ||||||||||    
T  4700205 ataagcacttatgtacaagctatttctataacaaaagataaaataaagtta 4700155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 4700242 - 4700193
Alignment:
Q  256 ccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatg 306  Q
    ||||||||| ||||||| ||||||||||||||| | |||||||||||||||    
T  4700242 ccctgtttggattaacaacttaatttgcagctt-ttacataagcacttatg 4700193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 493
Target Start/End: Complemental strand, 7218119 - 7218033
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||| |||||  | ||||| ||  || |||||||| ||||| |||||    
T  7218119 tggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtcataagtcgttttcacaagctcccccaaacaatctcagaagtg 7218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 490
Target Start/End: Complemental strand, 9572100 - 9572062
Alignment:
Q  452 ataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  9572100 ataagctgttttcataagttctcccaaacagtctcacaa 9572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 489
Target Start/End: Original strand, 11695886 - 11695968
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||| ||||| ||||||||||||||||||||||| || |||||| |||| ||| || ||||   | ||||||||| |||||||    
T  11695886 tggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccatatgctttcccaaacaatctcaca 11695968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 481
Target Start/End: Original strand, 29635380 - 29635446
Alignment:
Q  415 ttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaaca 481  Q
    ||||||||||||| |||||||| ||| | ||||||| ||||  || |||||||||||||| ||||||    
T  29635380 ttgtgaaaataagctgaaaacaacttataaacatgtcataacttgttttcataaattctctcaaaca 29635446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 493
Target Start/End: Complemental strand, 32515470 - 32515400
Alignment:
Q  423 ataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||||| ||| |  |||||| ||| |||| || |||||  |||||||||||||||||||||||    
T  32515470 ataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagtg 32515400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 365
Target Start/End: Original strand, 37841888 - 37841981
Alignment:
Q  269 aacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||| ||||||||||||||  || ||||||||||||| |||||||  |   || ||||||| |||||| ||||||||||  ||| ||||||||||||    
T  37841888 aacaacttaatttgcagctaatagcataagcacttatcatgataagta---ctcatgtataagctattcctataacaaatgataaaataaagttaaa 37841981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 42336599 - 42336641
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||    
T  42336599 gcttatgtataggttatttttataacaaaaaataaaataaagt 42336641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 46252811 - 46252769
Alignment:
Q  323 atgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||    
T  46252811 atgtataggctatttttataacaaaagataaaataaagttaaa 46252769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 459
Target Start/End: Complemental strand, 1565581 - 1565528
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctg 459  Q
    ||||||||||  |||||||||| |||||||||||| || |||||| ||||||||    
T  1565581 ttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataagctg 1565528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 492
Target Start/End: Complemental strand, 4920810 - 4920729
Alignment:
Q  412 agcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcat-aaattctcccaaacagtctcacaagt 492  Q
    ||||| |||||||||| | |||||| | |  |||||||| |||| ||| |||||| ||||||||||||| ||||||||||||    
T  4920810 agcttatgaaaataagctaaaaacaacctaagaacatgtcataacctgttttcattaaattctcccaaagagtctcacaagt 4920729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 10854770 - 10854815
Alignment:
Q  419 gaaaataagttgaaaacagcttctgaacatgttataagctgctttc 464  Q
    ||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  10854770 gaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 10854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 493
Target Start/End: Complemental strand, 33723422 - 33723341
Alignment:
Q  412 agcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||| || ||||||| |||||||| ||  ||||||||| || ||||| || ||||| || |||||| ||||||||||||||    
T  33723422 agcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtg 33723341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 490
Target Start/End: Complemental strand, 37617502 - 37617426
Alignment:
Q  414 cttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||||||||| || ||||| ||||  | || | |||||| |||||||||||||| |||||||||||||||    
T  37617502 cttgtgaaaataagttgacaa-agcttatgaaatttgtcaaaagctgttttcataaattctcgcaaacagtctcacaa 37617426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 50319230 - 50319271
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||||||||| |||||||||||||||||| ||| ||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagt 50319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 491
Target Start/End: Complemental strand, 51695556 - 51695455
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   ||||||||  || |||||||||| |||||| ||||| ||||| |||| ||||| || ||  |||| |||| |||||||||||||||    
T  51695556 ttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttcttccaaacagtctcaca 51695457  T
Q  490 ag 491  Q
    ||    
T  51695456 ag 51695455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 172709 - 172665
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaagttaa 364  Q
    |||||||||| |||||||||||||||||| |||  ||||||||||    
T  172709 cttatgtataagctatttctataacaaaagataacataaagttaa 172665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 2462904 - 2462948
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagtta 363  Q
    ||||||||||| |||||||||||||||||| |||  |||||||||    
T  2462904 gcttatgtataagctatttctataacaaaatataagataaagtta 2462948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 4549888 - 4549948
Alignment:
Q  422 aataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacag 482  Q
    |||||| |||||||| ||| ||||||||| |||| ||| ||||| || |||||||||||||    
T  4549888 aataagctgaaaacaacttatgaacatgtcataatctgttttcagaagttctcccaaacag 4549948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 7119971 - 7119899
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||||| ||||| |||||| |||| || | ||||| || |||||||||||||  |||||||||||||||    
T  7119971 tgaatataagctgaaagcagcttatgaagatatcataagttgttttcataaattcttgcaaacagtctcacaa 7119899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 12477318 - 12477247
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||| ||| || |||||| ||||||||||||||| || ||| ||||| ||||||| |||||    
T  12477318 aaataagctgaaaacaacttatggacatgtcataagctgctttcattaactct-ccaaatagtctcagaagtg 12477247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 497
Target Start/End: Complemental strand, 35058479 - 35058387
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggtta 497  Q
    |||||||| |||  |||| |||| ||||||||||||  |||||||| ||||| |  |||  ||| |||||||||||||||  |||||||||||    
T  35058479 cttggagaacttacgaaagtaagctgaaaacagcttacgaacatgtaataagttattttagtaagttctcccaaacagtcagacaagtggtta 35058387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 35058949 - 35058893
Alignment:
Q  256 ccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgata 312  Q
    ||||||||| || ||||||||| |||||| ||| || ||||||||||||| ||||||    
T  35058949 ccctgtttggataaacagcttattttgcaacttatagcataagcacttatcatgata 35058893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 492
Target Start/End: Original strand, 38578566 - 38578638
Alignment:
Q  420 aaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||||||| | |||||| ||| |||| |||||||||| || |||||||| ||   ||||||||||||||||||    
T  38578566 aaaataagctcaaaacaacttatgaatatgttataagttgttttcataagttagtccaaacagtctcacaagt 38578638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 40414053 - 40413981
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||||||| ||| || |||| | || || ||||||| ||| |||||||||||| ||| |||||||    
T  40414053 aaataagttgaaaacaacttatggacatttcatcagttgctttcgtaagttctcccaaacaatcttacaagtg 40413981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 43420297 - 43420369
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||||||||| | | || ||||||||| |||||||| || |||||  |||| ||| ||||||||||||||    
T  43420297 aaataagttgaaagcggattatgaacatgtcataagctgtttccataagatctcacaagcagtctcacaagtg 43420369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 487
Target Start/End: Original strand, 45975684 - 45975796
Alignment:
Q  376 ataagccacaatctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaa-catgttataagctgctttcataaattctc 474  Q
    |||||| |||| || |||||||||||   ||||||||  || |||||||||| |||||||||||| ||||  ||||||||  ||| |||||||  |||||    
T  45975684 ataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttctc 45975783  T
Q  475 ccaaacagtctca 487  Q
    |  ||||||||||    
T  45975784 ctgaacagtctca 45975796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 52286609 - 52286661
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||| ||| | |||||||| ||||||| ||| ||||||||||||    
T  52286609 ataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaa 52286661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 4e-21; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 493
Target Start/End: Complemental strand, 12313220 - 12313132
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||| |||||||||| ||||| || ||| ||||||||  |||||||| ||||||||||||||||||||| |||||||||||    
T  12313220 cttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctcacaagtg 12313132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 43279575 - 43279488
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaat--tctcccaaacagtctcacaa 490  Q
    ||||||| ||||||||||||||||||||| ||||| |||| | ||| |||||||| ||||||||||  ||||||||||||||||||||    
T  43279575 ttggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctctcccaaacagtctcacaa 43279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 493
Target Start/End: Complemental strand, 43529901 - 43529817
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| |||||||||  |||||| ||||| ||||||||  |||||||| ||||||||||||||||||||||| ||| |||||    
T  43529901 gagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtg 43529817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 493
Target Start/End: Original strand, 38809351 - 38809437
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||| || ||||||||||||||||| || | ||||||| |||||||| ||| |||| |||||||||||| | |||||||||    
T  38809351 tggagagcttatggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctcccaaacattttcacaagtg 38809437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 5902581 - 5902508
Alignment:
Q  420 aaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| ||| ||||||||| || ||||||||| |||||||| |||||||| |||| |||||||||||||||||||    
T  5902581 aaaacaagctgaaaacagtttatgaacatgtcataagctgttttcataagttcttccaaacagtctcacaagtg 5902508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 43530142 - 43530070
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||||| ||||| ||||||||| |||| ||| |||||||| ||||||||| || |||||||||||    
T  43530142 aaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagttctcccaagcactctcacaagtg 43530070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 28677705 - 28677626
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtct 485  Q
    ||||||||||| || |||||||  ||||||| ||| |||| |||| |||||||| |||||||| ||||||||||||||||    
T  28677705 ttggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtct 28677626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 492
Target Start/End: Original strand, 32837386 - 32837433
Alignment:
Q  445 acatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  32837386 acatgttataagctgttttcataagttctcccaaacagtctcacaagt 32837433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 493
Target Start/End: Original strand, 787373 - 787443
Alignment:
Q  423 ataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||| |||||||||||| || |||||| |||||||| |||||||| ||||| |||||||| |||||||||    
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtg 787443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 488
Target Start/End: Original strand, 10567082 - 10567163
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    |||||||||||||||||| || |||||||| ||| ||| ||||| |||||||| || || ||  ||||||||||||||||||    
T  10567082 tggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgtttccacaatctctcccaaacagtctcac 10567163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 15757692 - 15757619
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| |||||| |||||||||| || || |||||| | |||||||||||||||||| |||||||||||    
T  15757692 tgaaaataagctgaaaaaagcttctgaaaattgtcataagcagttttcataaattctcccaagcagtctcacaa 15757619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 489
Target Start/End: Original strand, 16451141 - 16451226
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||| || ||||||||||| |||||||||||  ||||| |||| ||||| || |||||||| ||||||||||| ||||||||    
T  16451141 cttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaacggtctcaca 16451226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 492
Target Start/End: Original strand, 40158743 - 40158828
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||||||||| || || |||| |||||||| ||| | ||||||| |||||||| |||||||| ||| ||||| |||||||||||||    
T  40158743 tggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtctcacaagt 40158828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 680509 - 680589
Alignment:
Q  388 ctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    ||||||||||||||   |||| ||| |||||||||||||| ||||||||| || | ||||||| |||||||| ||||||||    
T  680509 ctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 15288800 - 15288710
Alignment:
Q  255 gccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaa 348  Q
    |||||||||| ||||||||||||||||  ||||| || ||||| | || || | |   ||||||||||||||||| ||||||||||||||||||    
T  15288800 gccctgtttggattaacagcttaatttatagcttatagcataaactctcatcaag---ataagcgcttatgtataagctatttctataacaaaa 15288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 34055040 - 34054993
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaag 360  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaag 34054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 492
Target Start/End: Complemental strand, 41042069 - 41041982
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    ||||||||| || || |||||||||||||||||||  || |||||| ||||| || ||  ||||||||||  ||||||||||||||||    
T  41042069 cttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataaattctctgaaacagtctcacaagt 41041982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 33503048 - 33503106
Alignment:
Q  423 ataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaaca 481  Q
    ||||| |||||| ||||| |||| |||| |||||||| |||||||||||||||||||||    
T  33503048 ataagctgaaaatagcttatgaaaatgtcataagctgatttcataaattctcccaaaca 33503106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 33576727 - 33576685
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  33576727 gcttatgtataggttatttctataacaaaagatacaataaagt 33576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 493
Target Start/End: Original strand, 1801722 - 1801779
Alignment:
Q  436 agcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||| ||||||||| |||||||| |||||||| |||||||||||| | |||||||||    
T  1801722 agcttatgaacatgtcataagctgttttcataagttctcccaaacaatatcacaagtg 1801779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 34652097 - 34652032
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||||   |||||||||||| || |||||||||||||||||||| || |||||| |||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataag 34652032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 35379077 - 35379000
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    |||||||||||   |||||||||||| |||||||||| |||||||| ||| |||||| || || ||||| ||||||||    
T  35379077 ttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataa 35379000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 36534804 - 36534877
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| |||||| || || |||||| | |||||||||| |||||||| || ||||||||||||||||||    
T  36534804 tgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtctcacaa 36534877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 473
Target Start/End: Original strand, 1647263 - 1647327
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattct 473  Q
    |||||||| || ||||||| |||||||||||| ||| ||||| |||||||| |||||||| ||||    
T  1647263 gagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagttct 1647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 459
Target Start/End: Original strand, 25790151 - 25790203
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctg 459  Q
    |||||||||| |||||||||||| ||||||||||  |||||||| ||||||||    
T  25790151 tggagagcttatgaaaataagttcaaaacagcttaggaacatgtaataagctg 25790203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 37053525 - 37053573
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||||    
T  37053525 ataagtgcttatgtatagactatttctataacagaaaataaaataaagt 37053573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 39567779 - 39567886
Alignment:
Q  255 gccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaataca 354  Q
    |||| ||||| || ||||||||||||  |||||| |  ||||||| ||||| |||||||   || ||| |||||| | |||||||||||||||| ||| |    
T  39567779 gcccggtttggataaacagcttaattcacagcttattgcataagcgcttatcatgataa---gcacttgtgtataagatatttctataacaaaagataaa 39567875  T
Q  355 ataaagttaaa 365  Q
    |||||||||||    
T  39567876 ataaagttaaa 39567886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 483
Target Start/End: Original strand, 41817193 - 41817269
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagt 483  Q
    |||||||||| || ||||||| ||||||||  || | ||||||| ||||| || ||||||||||||||| |||||||    
T  41817193 tggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcctaaacagt 41817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 42907383 - 42907443
Alignment:
Q  404 acttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttc 464  Q
    ||||||||||||| |||||||| | ||||| |||||| ||||||||||| |||||| ||||    
T  42907383 acttggagagcttatgaaaataggctgaaagcagcttatgaacatgttagaagctggtttc 42907443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 493
Target Start/End: Complemental strand, 43199831 - 43199743
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||| ||||| |||| |||||||| ||| | ||||||| | ||| ||  ||| ||| ||||||||||||||||||||||||    
T  43199831 cttggagggcttatgaaattaagctgaaaacaacttataaacatgtcacaagttgtattcgtaacttctcccaaacagtctcacaagtg 43199743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 11393793 - 11393742
Alignment:
Q  314 taagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||| ||||||||||| |||||||||||| ||||| ||||||||||| ||||    
T  11393793 taagtgcttatgtataagctatttctataccaaaagatacaataaagctaaa 11393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 11410454 - 11410403
Alignment:
Q  314 taagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||| ||||||||||| |||||||||||| ||||| ||||||||||| ||||    
T  11410454 taagtgcttatgtataagctatttctataccaaaagatacaataaagctaaa 11410403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 35485964 - 35486027
Alignment:
Q  429 tgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||||||||||| ||||||| | ||||| ||||||  ||| ||||| |||||||||||||||||    
T  35485964 tgaaaacagcttatgaacatatcataagttgctttagtaagttctctcaaacagtctcacaagt 35486027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 5133709 - 5133755
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| ||||    
T  5133709 gcttatgtataagctatttctataacaaaagataaaataaagataaa 5133755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 8017443 - 8017545
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||| ||| |||||||| |  |||||||  || ||||||| | |||||||| |||||||| |||||||||| | || |||||    
T  8017443 ttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttctcccaaataatcgcacaa 8017542  T
Q  491 gtg 493  Q
    |||    
T  8017543 gtg 8017545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 27663424 - 27663370
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctg 459  Q
    |||||||||||||||| |||||| || ||||||| | |||||||||||| |||||    
T  27663424 cttggagagcttgtgataataagctggaaacagcctatgaacatgttattagctg 27663370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 40279431 - 40279512
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctca 487  Q
    ||||||| ||| |||||||||||||||||||| || || || |||||| ||| || |||||| | ||||||||||||||||||    
T  40279431 ttggagaacttatgaaaataagttgaaaacagtttatggacaatgttaaaagttgttttcat-agttctcccaaacagtctca 40279512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 490
Target Start/End: Complemental strand, 40682438 - 40682356
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||| ||||||||||||||||||| ||| ||||| |||| |||||||  ||| | || |||||||||||| ||||||||    
T  40682438 gagaacttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaacaatctcacaa 40682356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 485
Target Start/End: Complemental strand, 43985064 - 43984970
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtct 485  Q
    |||||||||||   |||| ||||||| |||||||||| |||||| || |  ||||||| |||||||||| ||| | |||||||| ||||| ||||    
T  43985064 ttttcataagctatcttgaagagcttatgaaaataagctgaaaatagataatgaacatattataagctgatttaacaaattctctcaaacggtct 43984970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 493
Target Start/End: Original strand, 1318290 - 1318347
Alignment:
Q  436 agcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| |||||| ||||| || ||||||||  |||| ||||||||||||||||||    
T  1318290 agcttctggacatgtcataagatgttttcataagctctcacaaacagtctcacaagtg 1318347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 456
Target Start/End: Complemental strand, 1939377 - 1939328
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||| || |||||||||||||||||||| || |||||| |||||    
T  1939377 tggagagcttatggaaataagttgaaaacagcttatggacatgtcataag 1939328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 12464537 - 12464480
Alignment:
Q  388 ctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaa 445  Q
    ||||||||||||||   |||||||| |||||||||||||| |||||| ||||| ||||    
T  12464537 ctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaa 12464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 487
Target Start/End: Complemental strand, 26143701 - 26143604
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||||  ||||||||| ||| |||||||||| |||||| | | | ||||| |||  ||||| || |||| ||| ||||||||||||||||||    
T  26143701 ttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgttttcgtaagttctcccaaacagtctca 26143604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 32106841 - 32106764
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    ||||||| |||| |||| |||||||||||||    | |||| |||||||| |||||||| ||||| ||||||||||||    
T  32106841 agagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtctca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 33941918 - 33941995
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    |||||||||||   ||||||||| || ||| |||||||||||| |||||| ||||| ||| ||||| || ||||||||    
T  33941918 ttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataa 33941995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 1625909 - 1626009
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   |||||||| |||  |||||| || |||||||| ||| |||||| ||| ||||||| ||||||||| ||||| |||| ||||| |||    
T  1625909 ttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagctactttcataagttctctcaaatagtcttaca 1626008  T
Q  490 a 490  Q
    |    
T  1626009 a 1626009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 3673738 - 3673790
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||| ||||||||||  | |||||||||||||||| ||| ||||||||||||    
T  3673738 ataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaa 3673790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 492
Target Start/End: Original strand, 9478341 - 9478409
Alignment:
Q  424 taagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||| |||||||||||| || |||||| ||||| || || |||||| |||| ||||||||| |||||||    
T  9478341 taagatgaaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtcacacaagt 9478409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 17952840 - 17952792
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| |||||| |||| |||||||||||||||||| ||| ||||||||    
T  17952840 ataagagcttatatataagctatttctataacaaaagataaaataaagt 17952792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 19333371 - 19333327
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgt 450  Q
    ||||||||||| |||||||||| ||| |||||||| |||||||||    
T  19333371 ttggagagcttatgaaaataagctgagaacagcttatgaacatgt 19333327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 25609727 - 25609775
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||||| ||||||||||||| |||| ||| ||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagt 25609775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 28039363 - 28039291
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||||||| |||||| || ||||  || |||||||||||| | | ||||||| ||||||||    
T  28039363 aaataagctgaaaacagcttatgaacaagtcataacttgttttcataaattcactcgaacagtcacacaagtg 28039291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 33197378 - 33197330
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| |||||| |||| |||||||||||||||||| ||| ||||||||    
T  33197378 ataagtgcttatctataagctatttctataacaaaagatagaataaagt 33197330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 33267655 - 33267603
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||| |||||||||||  |||||||||||||||| | || ||||||||||||    
T  33267655 ataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaa 33267603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 432
Target Start/End: Original strand, 35539729 - 35539773
Alignment:
Q  388 ctattttcataagcagacttggagagcttgtgaaaataagttgaa 432  Q
    |||||||||||| ||| ||||||||||||  ||||||||||||||    
T  35539729 ctattttcataaccagtcttggagagcttacgaaaataagttgaa 35539773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 41812123 - 41812055
Alignment:
Q  421 aaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    |||||||||||||| ||||| |||| | ||| |||||||| ||||| || ||||||||||||| |||||    
T  41812123 aaataagttgaaaaaagcttatgaaaaatgtcataagctgttttcaaaagttctcccaaacagcctcac 41812055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 9e-19; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 278 - 479
Target Start/End: Original strand, 39105363 - 39105562
Alignment:
Q  278 atttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaannnnnnnngcat 377  Q
    ||||||||||| || ||||||  ||||| |||||||   ||||||||||||| |||||||||||| | ||| ||  ||| ||||||||        | ||    
T  39105363 atttgcagcttatagcataagtgcttatcatgataa---gcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtat 39105459  T
Q  378 aagccacaatctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctccc 476  Q
    |||| | ||||| |||||||||||   |||||||| ||| |||||||||| | |||| ||||| |||||| ||| |||||||| ||||||||||||||||    
T  39105460 aagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctccc 39105559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 493
Target Start/End: Original strand, 6593177 - 6593410
Alignment:
Q  256 ccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaa 355  Q
    ||||||||| || |||| |||||||| |||||| || ||||| || ||||  |||||    |||||||||||||  | ||||||||||||||| ||| ||    
T  6593177 ccctgtttggataaacaacttaatttacagcttatagcataatcatttatcttgatac---gcgcttatgtataaacaatttctataacaaaagataaaa 6593273  T
Q  356 taaagttaaannnnnnnngcataagccacaatctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataa 455  Q
    ||||||||||        | ||| || | || || |||| ||||||   ||| |||||||| |||||||||| |||||| ||||| | ||||  | | ||    
T  6593274 taaagttaaattattct-gtataggctataagctgttttgataagctaccttagagagcttatgaaaataagctgaaaagagcttgttaacacatcaaaa 6593372  T
Q  456 gctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  6593373 gctgttttcataaattctcccaaatagtctcacaagtg 6593410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 16458025 - 16457940
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| |||||||||||||  |||||| ||||| |||| | ||| |||||||| |||||||| |||||||||||||||||||||    
T  16458025 ttggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaaacagtctcacaa 16457940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 348
Target Start/End: Complemental strand, 42573971 - 42573883
Alignment:
Q  257 cctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaa 348  Q
    |||||||| || |||||||||||||||||||| || | | ||| ||||| |||||||   ||||||||||||| ||||||||||||||||||    
T  42573971 cctgtttggataaacagcttaatttgcagcttatagcctgagcgcttatcatgataa---gcgcttatgtataagctatttctataacaaaa 42573883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 490
Target Start/End: Original strand, 39248143 - 39248207
Alignment:
Q  426 agttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||||||| |||||| || |||||||| ||| |||| |||||||||||||||||||||    
T  39248143 agttgaaaacagcttatgaacaagtcataagctgtttttataagttctcccaaacagtctcacaa 39248207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 481
Target Start/End: Original strand, 1618970 - 1619188
Alignment:
Q  257 cctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaat 356  Q
    |||||||| || || |||||||||||| |||| || ||||||| ||| |||||   |||||| ||| |||||| |||||||||| ||||||||||  |||    
T  1618970 cctgtttgcatgaagagcttaatttgctgcttatagcataagcgcttttgatg---ataagcacttttgtataagctatttctaaaacaaaaaat--aat 1619064  T
Q  357 aaagttaaannnnnnnngcataagccacaatctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||        | |||||| | || || |||||||||||  | ||||||||| | ||||||| || ||||||||| || || | |||  |||||    
T  1619065 aaagttaaattctttccgtataagctataagctgttttcataagc-catttggagagcatatgaaaatcagctgaaaacagtttatgtaaatggcataag 1619163  T
Q  457 ctgctttcataaattctcccaaaca 481  Q
    ||| |||||||| | ||||||||||    
T  1619164 ctgttttcataagtactcccaaaca 1619188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 493
Target Start/End: Complemental strand, 17258925 - 17258842
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||||| |||||||||||| ||||||||| |||||||  |||||||  |||||||||| | | |||||||||    
T  17258925 agagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaatgtcacaagtg 17258842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 487
Target Start/End: Original strand, 7808541 - 7808611
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||| |||||||||||| |||||| |||||||||||  ||||||||  |||||||||||||||||    
T  7808541 tgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctca 7808611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 490
Target Start/End: Original strand, 7674579 - 7674756
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaannnnnnnngcataagccacaatctattttcataagcagacttggaga 412  Q
    |||||| ||||| |||| |||||||||||| ||||| ||| |||||| |||||          |||||||| ||  | |||||||||||   ||||||||    
T  7674579 ataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagccataaaatgttttcataagctatcttggaga 7674678  T
Q  413 gcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
      ||||||||||||| |||||||| ||| | ||||||| ||||| || || ||||| |||| |||| |||||||||||    
T  7674679 atttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttcttccaagcagtctcacaa 7674756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 497
Target Start/End: Complemental strand, 18857461 - 18857353
Alignment:
Q  391 ttttcataagcagacttggagagct--tgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    ||||||||||| | ||||||||| |  | ||||| |||||| |||||||||| ||||||||| || ||||| ||||||||||||| | || || ||||||    
T  18857461 ttttcataagctgtcttggagaggtgttatgaaattaagttaaaaacagcttatgaacatgtcattagctgttttcataaattcttctaagcattctcac 18857362  T
Q  489 aagtggtta 497  Q
    |||| ||||    
T  18857361 aagtcgtta 18857353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 37611276 - 37611175
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||||||| || ||||||  |||||||||||| ||||||||| | ||| || ||||||||  |||| |||||| ||||||||    
T  37611276 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaa 37611177  T
Q  491 gt 492  Q
    ||    
T  37611176 gt 37611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 37788006 - 37787905
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||||||| || ||||||  |||||||||||| ||||||||| | ||| || ||||||||  |||| |||||| ||||||||    
T  37788006 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaa 37787907  T
Q  491 gt 492  Q
    ||    
T  37787906 gt 37787905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 482
Target Start/End: Complemental strand, 499775 - 499701
Alignment:
Q  408 ggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacag 482  Q
    |||||| || || ||||||| |||||||| ||| | ||||||| |||||||| |||||||| |||||||||||||    
T  499775 ggagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacag 499701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 6587152 - 6587062
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggtta 497  Q
    |||||| |||||||||||||| || ||||||||| ||||| ||| |||||||| |||  ||| |||| ||||||||| | |||||| ||||    
T  6587152 tggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgtttttttaagttcttccaaacagtttaacaagtagtta 6587062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 7999347 - 7999298
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagctt 440  Q
    ||||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  7999347 ttttcataagctgtcttggagagcctgtgagaataagttgaaaacagctt 7999298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 13264137 - 13264064
Alignment:
Q  420 aaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| |||||||||||| |||| |||  |||||||| || |||||| ||| |||||||||||| ||||||    
T  13264137 aaaataagctgaaaacagcttatgaatatggcataagctgtttccataaactcttccaaacagtctcgcaagtg 13264064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 29925865 - 29925950
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||||||||||| | |   ||||||| || |||||||| |||||||| ||||||||||| |||||||||    
T  29925865 ttggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacggtctcacaa 29925950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 490
Target Start/End: Complemental strand, 35445890 - 35445805
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||  || |||||||||| ||||||   ||  |||||||||||||||||| |||||||||||||  |||| ||||||||||    
T  35445890 cttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 35445805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 474
Target Start/End: Complemental strand, 36542325 - 36542260
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctc 474  Q
    ||||||||||| ||||||||| ||||||||||||| |||||| ||||| || || |||||| ||||    
T  36542325 gagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgtttccataaaatctc 36542260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 4855737 - 4855812
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggttaag 499  Q
    |||||||  ||||||||||||||||||||| ||||| ||||   ||||  |||| |||||||||||||||||| |||||    
T  4855737 aaataagccgaaaacagcttctgaacatgtcataagttgct---ataagctctctcaaacagtctcacaagtgtttaag 4855812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 489
Target Start/End: Complemental strand, 12460048 - 12459964
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||| ||||||| ||||||||||   |||||| | | ||||||||| ||||| || |||||||  ||||||||||||||||||||    
T  12460048 cttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcccaaacagtctcaca 12459964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 13604896 - 13604833
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    |||| ||||||| ||||||||||||||||||| | | || |||||| |||||||| ||||||||    
T  13604896 cttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataa 13604833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 21768244 - 21768181
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    |||| |||||||  |||||||||||||||||||| | || |||||| |||||||| ||||||||    
T  21768244 cttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataagctgttttcataa 21768181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 490
Target Start/End: Complemental strand, 37526244 - 37526161
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| || ||||||| |||||||||||| | ||||||| ||| | ||  |||||||  |||| |||||||||||||||    
T  37526244 tggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctcacaa 37526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 490
Target Start/End: Complemental strand, 37690681 - 37690598
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| || ||||||| |||||||||||| | ||||||| ||| | ||  |||||||  |||| |||||||||||||||    
T  37690681 tggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctcacaa 37690598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 486
Target Start/End: Complemental strand, 1465158 - 1464985
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaannnnnnnngcataagccacaatctattttcataagcagacttggaga 412  Q
    ||||||||||||||||| |||||||||||| || |  ||| ||||||||||||        |  ||||| | ||  |||||| ||||||   |||||||     
T  1465158 ataagcgcttatgtataagctatttctatagcataggataaaataaagttaaatcgcttttgtgtaagctataagttatttt-ataagctatcttggagg 1465060  T
Q  413 gcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctc 486  Q
     |||||||||||||| |||||||| ||| ||| | |||  |||||||| |||||||| ||||||| |||||||||    
T  1465059 acttgtgaaaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctcccgaacagtctc 1464985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 2568667 - 2568769
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   | |||||||||  |||||||||| | |||| | ||| |||| |||| |||||||| |||||||| |||| | |||||||||| |||    
T  2568667 ttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttcttctaaacagtctctcaa 2568766  T
Q  491 gtg 493  Q
    |||    
T  2568767 gtg 2568769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 4014563 - 4014513
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagtta 363  Q
    |||||||| |||||||| |||||||||||| ||||| ||| ||||||||||    
T  4014563 ataagcgcctatgtataagctatttctatagcaaaagataaaataaagtta 4014513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 7096260 - 7096218
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||    
T  7096260 gcttatgtataagctatttctataacaaaagataaaataaagt 7096218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 351
Target Start/End: Complemental strand, 10772068 - 10771979
Alignment:
Q  259 tgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaat 351  Q
    |||||||||  ||| ||||||||||||||| || ||||||  ||||| |||||||  |   | |||||||| |||||||||||||||||||||    
T  10772068 tgtttgaatatacaacttaatttgcagcttatagcataagtgcttatcatgataaaca---catatgtataagctatttctataacaaaaaat 10771979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 4855636 - 4855681
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||||||  ||||||| |||||||||||||| ||||||||||||    
T  4855636 cttatgtattagctatttttataacaaaaaataaaataaagttaaa 4855681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 15406046 - 15406005
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctg 459  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||    
T  15406046 tgaaaataaattgaaaacagcttatgaacatgtcataagctg 15406005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 29588811 - 29588856
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataa 358  Q
    ||||| ||||||||||| |||||||||||||||||| ||| |||||    
T  29588811 ataagtgcttatgtataagctatttctataacaaaatataaaataa 29588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 34690812 - 34690853
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||||||||| |||||||||||||||||| ||| ||||||||    
T  34690812 cttatgtatacgctatttctataacaaaagataaaataaagt 34690853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 37914647 - 37914696
Alignment:
Q  256 ccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttat 305  Q
    ||||||||| || |||||||||||||| ||||| || |||||||||||||    
T  37914647 ccctgtttggataaacagcttaatttgtagcttctagcataagcacttat 37914696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 486
Target Start/End: Original strand, 37954722 - 37954791
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgtt-ataagctgctttcataaattctcccaaacagtctc 486  Q
    ||||||||||||||||| ||||  |||| || || |||||||| ||||||||| |||||| |||||||||    
T  37954722 tgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataaactctcccgaacagtctc 37954791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 465885 - 465937
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||| ||||| |||| ||||||||||| |||||| ||| ||||||||||||    
T  465885 ataagcacttatatataagctatttctatgacaaaagataaaataaagttaaa 465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 706394 - 706446
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||||||| ||||||||||||  |||| ||| |||| |||||||    
T  706394 ataagcgcttatgtataagctatttctatagtaaaagataaaatatagttaaa 706446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 4014485 - 4014429
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaaca 447  Q
    |||||||||||   |||||||| ||| |||||||||| |||||||||||| ||||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 483
Target Start/End: Original strand, 4619732 - 4619808
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagt 483  Q
    |||||| ||| || ||||||| ||||| |||||| ||||||||| || || || ||||||||  |||||||||||||    
T  4619732 tggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 7984978 - 7985078
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   ||||||||  || |||||||||| |||||||||||| ||||| | || | |||||| |||| |||  ||||||||| |||||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaatagtctcaca 7985077  T
Q  490 a 490  Q
    |    
T  7985078 a 7985078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 11054117 - 11054165
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||| |||||||||||| ||||||||||||| |||| ||| ||||||||    
T  11054117 ataaacgcttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  321 ttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||| |||||||||||||||||| ||| ||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 13224366 - 13224406
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaa 359  Q
    ||||||||||| |||||||||||||||||| ||| ||||||    
T  13224366 gcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 16863812 - 16863856
Alignment:
Q  414 cttgtgaaaataagttgaaaacagcttctgaacatgttataagct 458  Q
    |||||||||||||| |||||||| |||  ||||||||||||||||    
T  16863812 cttgtgaaaataagctgaaaacaacttaagaacatgttataagct 16863856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 20982274 - 20982226
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||||| |||||||||||||||||  ||| ||||||||    
T  20982274 ataagtgcttatgtataagctatttctataacaaaggataaaataaagt 20982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 32927973 - 32928017
Alignment:
Q  255 gccctgtttgaattaacagcttaatttgcagcttgtaacataagc 299  Q
    ||||||||||||| |||| ||||||||||||||| || |||||||    
T  32927973 gccctgtttgaataaacaacttaatttgcagcttatatcataagc 32928017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 41059595 - 41059686
Alignment:
Q  254 agccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaa 348  Q
    |||||||||||  | |||| ||||||||| ||||| ||  |||||||||||| ||||||||    ||||||| ||| ||||||||||| ||||||    
T  41059595 agccctgtttgtctaaacaacttaatttgtagcttatatgataagcacttatcatgataat---tgcttatgcataagctatttctatcacaaaa 41059686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 9e-19; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 21367676 - 21367776
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   |||||||| ||| |||||||||| |||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||||| ||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaacagtcccaca 21367775  T
Q  490 a 490  Q
    |    
T  21367776 a 21367776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 365
Target Start/End: Complemental strand, 35127551 - 35127458
Alignment:
Q  269 aacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||||| ||||||||||| || ||||||| ||||| |||||||   | |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  35127551 aacagcttcatttgcagcttataccataagctcttatcatgataa---gtgcttatgtataggctatttctataacaaaagatatactaaagttaaa 35127458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 489
Target Start/End: Complemental strand, 23808111 - 23808027
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    ||||||||| || |||||||||| ||||||||  || ||||||||| ||||||||||||||||| || |||||||| ||||||||    
T  23808111 cttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaaccgtctcaca 23808027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 31365222 - 31365149
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||||||||| ||||| |||| || || ||||||||||||||||| |||||||||||||||||||||    
T  31365222 tgaaaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaa 31365149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 53762426 - 53762361
Alignment:
Q  420 aaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtct 485  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||| || ||||||| ||||||||    
T  53762426 aaaataagttgaaaacagcttatgaacatgtcataagctgttttcaaaatttctccctaacagtct 53762361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 486
Target Start/End: Complemental strand, 54837097 - 54837000
Alignment:
Q  389 tattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctc 486  Q
    |||||||||||||   |||||| ||||| | ||||||||  |||||||  || ||||||||| |||||||| ||||||||||||| ||||||||||||    
T  54837097 tattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctgttttcataaattcttccaaacagtctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 493
Target Start/End: Original strand, 45541578 - 45541682
Alignment:
Q  389 tattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    |||||||||||||   |||||| | ||| ||| |||||  |||||||||||| ||||||||| |||||||| |||||||| |||| | ||||||||| ||    
T  45541578 tattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttac 45541677  T
Q  489 aagtg 493  Q
    |||||    
T  45541678 aagtg 45541682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 405 - 493
Target Start/End: Original strand, 47513676 - 47513764
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||| ||||||||| ||||||||| ||| ||||| ||| ||||  || |||||||| | ||||| ||||||||||||||||    
T  47513676 cttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataagtcctcccgaacagtctcacaagtg 47513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 5391915 - 5391965
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  5391915 tgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 5391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 30574104 - 30574002
Alignment:
Q  257 cctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaat 356  Q
    |||||||| || |||| | ||||||||||||| || |||||||| |||| |||||||   ||||||||||||| ||||||||||||  |||| ||| |||    
T  30574104 cctgtttggataaacaccataatttgcagcttatatcataagcatttatcatgataa---gcgcttatgtataagctatttctata--aaaagataaaat 30574010  T
Q  357 aaagttaa 364  Q
    ||||||||    
T  30574009 aaagttaa 30574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 37273143 - 37273245
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||| ||| || |||||||||||||||| ||| || |||||| ||||| || || |||||  |||||||||||||||||| |    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcacca 37273242  T
Q  491 gtg 493  Q
    |||    
T  37273243 gtg 37273245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 485
Target Start/End: Complemental strand, 402589 - 402508
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtct 485  Q
    |||| ||| ||||||||| |||| |||||||||||| |||||| ||| |||||||| |||||||  ||||||||||||||||    
T  402589 cttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctcccaaacagtct 402508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 456
Target Start/End: Complemental strand, 3044304 - 3044255
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  3044304 tggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataag 3044255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 25925767 - 25925816
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  25925767 tggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataag 25925816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 2128390 - 2128338
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagttaaa 2128338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 21574515 - 21574595
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||| || ||||||| | ||| |||||| ||||||||| ||||| || ||||||||  |||||||||||||||||    
T  21574515 tggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 38971297 - 38971369
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||||| ||| | || || |||||||||||||||    
T  38971297 aaataagttgaaaacagcttacgaacatgttataaactgttttcaaaaactatctcagacagtctcacaagtg 38971369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 53952075 - 53952155
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    ||||| || |||||||||| |||||||||||  |||||||||||| ||||| |||||||| |||||  ||||||| |||||    
T  53952075 gagagtttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttctcttaaacagtttcaca 53952155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 36139901 - 36139960
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttc 464  Q
    |||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  36139901 cttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 493
Target Start/End: Complemental strand, 2304292 - 2304230
Alignment:
Q  431 aaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||| ||||||||| ||||| ||||||||||| ||||| |||| ||| |||||||||    
T  2304292 aaaacagcttatgaacatgtcataagttgctttcataatttctctcaaatagtttcacaagtg 2304230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 22667413 - 22667514
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   ||||||||||||  | ||||||| | |||| | |||||||| |||||||| |||| || |||||| |||| |||||||||||||||    
T  22667413 ttttcataagctatcttggagagcttacggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcacaa 22667511  T
Q  491 gtg 493  Q
    |||    
T  22667512 gtg 22667514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 22724052 - 22724153
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   ||||||||||||  | ||||||| | |||| | |||||||| |||||||| |||| || |||||| |||| |||||||||||||||    
T  22724052 ttttcataagctatcttggagagcttacggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcacaa 22724150  T
Q  491 gtg 493  Q
    |||    
T  22724151 gtg 22724153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 490
Target Start/End: Complemental strand, 24085385 - 24085299
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||| |||||||||||||| |||||||||| | |||||| |   |||||||| |||||||| |||||| || |||||||||||    
T  24085385 cttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctccaaaccagtctcacaa 24085299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 493
Target Start/End: Complemental strand, 30573975 - 30573873
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||||||  |||| ||||| |||||||||||| ||||||||  ||||  || |||||||| ||||| ||||||  |||||||    
T  30573975 ttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctcacaaacaaactcacaa 30573876  T
Q  491 gtg 493  Q
    |||    
T  30573875 gtg 30573873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 36101596 - 36101650
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttc 464  Q
    ||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  36101596 agagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 482
Target Start/End: Original strand, 901948 - 902025
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttct-gaacatgttataagctgctttcataaattctcccaaacag 482  Q
    ||||||| ||| ||||||||||||||||| ||||| | ||| ||||||| ||||| |||||||| || ||||||||||    
T  901948 ttggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaaacag 902025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 39980753 - 39980838
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctg-aacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||||||||||| ||||| || |||  || |||||||| |||||||| |||||  ||||||||||||||    
T  39980753 ttggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaacagtctcacaa 39980838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 905109 - 905061
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||||| ||||| |||||||||||||||||| ||| ||||||||    
T  905109 ataagcgcttaagtataagctatttctataacaaaagataaaataaagt 905061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 20669110 - 20669158
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||||| |||||||||| |||||||||||||||| | ||||||||||||    
T  20669110 ataagcacttatgtataagctatttctataacaagatatacaataaagt 20669158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 474
Target Start/End: Complemental strand, 25453904 - 25453836
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgtt-ataagctgctttcataaattctc 474  Q
    |||| ||||| |||||||||| |||||| ||||| ||||||| || |||||||| ||||||||||||||    
T  25453904 tggaaagcttatgaaaataagctgaaaagagcttgtgaacattttcataagctgttttcataaattctc 25453836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 29427676 - 29427616
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaaca 481  Q
    |||||||||||||| ||||| ||||||||| || || || |||||||| ||||||||||||    
T  29427676 aaataagttgaaaatagcttatgaacatgtcattaggtgttttcataagttctcccaaaca 29427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 489
Target Start/End: Original strand, 50952356 - 50952440
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||| || ||||||| | ||||||| || ||||||||| |||||||| |||| ||  ||||| | ||||||||||||    
T  50952356 cttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttttcgtacgttctctcgaacagtctcaca 50952440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 54194444 - 54194484
Alignment:
Q  307 atgataataagcgcttatgtataggctatttctataacaaa 347  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  54194444 atgatgataagcgcttatgtataagctatttctataacaaa 54194484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Original strand, 20257610 - 20257645
Alignment:
Q  455 agctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||||| |||||||||||||||||||||    
T  20257610 agctgctttcataagttctcccaaacagtctcacaa 20257645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 493
Target Start/End: Original strand, 24624250 - 24624321
Alignment:
Q  422 aataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||| ||||||||| || || |||||| |||||||| ||||||||  ||| ||||||||||| |||||||    
T  24624250 aataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtcttacaagtg 24624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 491
Target Start/End: Complemental strand, 27896230 - 27896131
Alignment:
Q  392 tttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaag 491  Q
    ||||||||||   ||||||||| || |||||||||| |||  |||  || ||||| ||| || ||||| ||||||||||||||| ||||||||| |||||    
T  27896230 tttcataagctatcttggagagtttttgaaaataagctgacgacaatttatgaacttgtcatgagctgttttcataaattctcctaaacagtctaacaag 27896131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 488
Target Start/End: Original strand, 30443917 - 30444000
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcac 488  Q
    ||||||| ||| |||||||||| |||||| ||||| |||| || || |||||||| ||||||||  ||| ||||||||||||||    
T  30443917 ttggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcataagctctaccaaacagtctcac 30444000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 490
Target Start/End: Complemental strand, 34637989 - 34637946
Alignment:
Q  447 atgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||    
T  34637989 atgttataagctgttttcataagttctcccaaacaatctcacaa 34637946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 39602271 - 39602172
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   ||| |||| ||| |||||||||||||||||||  || ||||||||| ||||||||  |||||||  ||| ||||| || |||||||    
T  39602271 ttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctcttccaaatagcctcacaa 39602172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 42039091 - 42039138
Alignment:
Q  314 taagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||| ||||||||||| ||||||||| |||||||||||| ||||||||    
T  42039091 taagtgcttatgtataagctatttctgtaacaaaaaataaaataaagt 42039138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 493
Target Start/End: Complemental strand, 14548766 - 14548680
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||| || ||||||| |||||||||| | | || |||| ||| | || ||||||||  |||| ||||||||||||||||||    
T  14548766 tggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctctctcaaacagtctcacaagtg 14548680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 38902102 - 38902168
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagt 483  Q
    ||||||||||||||||||| | | |||||| ||| ||| |||| ||||||||||||| |||||||||    
T  38902102 tgaaaataagttgaaaacaacgtatgaacaatgtcatatgctgttttcataaattcttccaaacagt 38902168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 52619026 - 52619076
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataa 455  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||| ||||    
T  52619026 cttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataa 52619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 455
Target Start/End: Complemental strand, 2128292 - 2128255
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataa 455  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  2128292 tgaaaataagctgaaaacagcttatgaacatgttataa 2128255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 485
Target Start/End: Original strand, 31403381 - 31403462
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtct 485  Q
    |||||||| | |||||||||||| || ||||| ||| ||||| ||||||||| ||| | |||||| |||||||||| |||||    
T  31403381 cttggagaacctgtgaaaataagctgtaaacaacttatgaacaatgttataaactgttctcataagttctcccaaatagtct 31403462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 40665452 - 40665497
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgt 450  Q
    |||||||||||| | |||||||| |||||||||||| |||||||||    
T  40665452 cttggagagcttataaaaataagctgaaaacagcttatgaacatgt 40665497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 584118 - 584154
Alignment:
Q  453 taagctgctttcataaattctcccaaacagtctcaca 489  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcaca 584154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 493
Target Start/End: Complemental strand, 2152205 - 2152137
Alignment:
Q  425 aagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||||||||||||  |||||||| ||||| || ||||||||| | || |||  |||||||||||||    
T  2152205 aagttgaaaacagcttacgaacatgtcataagttgttttcataaaatatctcaattagtctcacaagtg 2152137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 490
Target Start/End: Complemental strand, 20195074 - 20194995
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| |||||| ||| |||||||| ||| |||| |||| |||| ||| ||||||||  |||| |||||||||||||||    
T  20195074 agagcttatgaaaa-aagctgaaaacaacttttgaatatgtcataaactgttttcataagctctcacaaacagtctcacaa 20194995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 491
Target Start/End: Complemental strand, 34707525 - 34707457
Alignment:
Q  423 ataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaag 491  Q
    |||||||||||||| ||| || |||||| | ||| || ||||| || ||||| ||||||||||||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcacaag 34707457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 34759659 - 34759619
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaag 360  Q
    |||||||||| |||||||||||| ||||||||| |||||||    
T  34759659 cttatgtataagctatttctatatcaaaaaataaaataaag 34759619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 41028990 - 41028942
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||||| |||||||||||||||||| | | ||||||||    
T  41028990 ataagtgcttatgtataagctatttctataacaaaagaaaaaataaagt 41028942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 493
Target Start/End: Original strand, 41057234 - 41057266
Alignment:
Q  461 tttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||| |||||||||||||||||||||||||||    
T  41057234 tttcacaaattctcccaaacagtctcacaagtg 41057266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 490
Target Start/End: Original strand, 43046738 - 43046774
Alignment:
Q  454 aagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||| |||||||| |||||||||||||||||||||    
T  43046738 aagctgttttcataagttctcccaaacagtctcacaa 43046774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 493
Target Start/End: Original strand, 43115083 - 43115167
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| || ||||||| ||||||||  || || |||||| ||||| || || |||||| ||| ||||||| |||||||||||    
T  43115083 gagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtg 43115167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 49465838 - 49465751
Alignment:
Q  274 cttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaa 364  Q
    |||||||||||| || || ||||| ||||||| |||| ||    ||||||||| || ||||||| |||||||||| ||| |||||||||||    
T  49465838 cttaatttgcagtttatagcataatcacttatcatgagaaa---cgcttatgtgtaagctatttttataacaaaagataaaataaagttaa 49465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 12851203 - 12851279
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtct 485  Q
    |||||||| ||||||||||  ||||||| ||| |||||||||||||||||| |||||||| || |||||||||||||    
T  12851203 gagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttcccaaacagtct 12851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 2488042 - 2487967
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| ||||| | ||||||| || ||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  2488042 tgaagataagctaaaaacagtttttgaacatgttataagttgttttcataagttctcccaaacagtctcacaagtg 2487967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 39551270 - 39551171
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   | |||||||||| | |||||||||| |||||||||| || |||||| ||||| || || |||||||||||||||||||| ||||||    
T  39551270 ttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacagtttcacaa 39551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 488
Target Start/End: Complemental strand, 42215351 - 42215270
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    |||||||||| || ||||||| |||||||||||| |||||| || |||||||| |||||| | |||||||||||||| ||||    
T  42215351 tggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattagttctcccaaacagtgtcac 42215270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 26215427 - 26215479
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaa 26215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 315 - 484
Target Start/End: Original strand, 7514511 - 7514681
Alignment:
Q  315 aagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaannnnnnnngcataagccacaatctattttcataagcagacttggagagc 414  Q
    |||| |||||||||| |||||||||||| |||||| || ||||| ||| ||          |||||| |||| || |||||||||||    ||| ||| |    
T  7514511 aagcccttatgtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctattttgcagaac 7514610  T
Q  415 ttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtc 484  Q
    | |||||||| ||||| ||||||||| |||||| |||||| ||||||||||| || |||||||||||||||    
T  7514611 tagtgaaaattagttggaaacagcttatgaacaatgttatcagctgctttcacaagttctcccaaacagtc 7514681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 311 - 481
Target Start/End: Original strand, 7646135 - 7646305
Alignment:
Q  311 taataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaannnnnnnngcataagccacaatctattttcataagcagacttgga 410  Q
    ||||||| | ||||||||| ||||||||||||| ||||  || ||||||||||||        | |||| | | || || | ||||||||| |||  |||    
T  7646135 taataagtggttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataatctataaactgtcttcataagctgaccagga 7646234  T
Q  411 gagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaaca 481  Q
    |||||| || ||||||| |||||| ||||  | ||||||| |||||| | |||||||||||||||||||||    
T  7646235 gagcttatggaaataagctgaaaatagctgatcaacatgtcataagcagttttcataaattctcccaaaca 7646305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 391 - 497
Target Start/End: Complemental strand, 11569518 - 11569412
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   | ||||||| || |||||||||| |||||||| ||| || |||||| |||||||| || |||||  ||||  ||||||||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaa 11569419  T
Q  491 gtggtta 497  Q
    |||||||    
T  11569418 gtggtta 11569412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 490
Target Start/End: Original strand, 26771292 - 26771374
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||| |||||||||||||||||  |||| |||| || || |||||||| |||||||| |||||||||||||||||||||    
T  26771292 gagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaa 26771374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 7918493 - 7918412
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctc 486  Q
    |||||||||||| |  |||||||||| ||||||||| |||||||||  |||| || ||||||||  ||||||||||||||||    
T  7918493 cttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 18133680 - 18133765
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| |||||||||| |||||| ||||| |||| || ||||||||||| ||||| ||  ||||||||||||||||||||    
T  18133680 ttggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctgatttcacaagctctcccaaacagtctcacaa 18133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 35644034 - 35643949
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||| ||||||||||||||||| ||||| |||| | ||| |||| ||  |||||||| || ||||||||||||||||||    
T  35644034 ttggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaa 35643949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 21653012 - 21653064
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||||||||||||||| | |||||||| ||| ||||||||||||    
T  21653012 ataagcgcttatgtataggctatttatgtaacaaaagataaaataaagttaaa 21653064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 11415181 - 11415264
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    ||||| ||||||||||||| ||| || ||||| || ||||||||||||||| || |||||| ||||  ||||| ||||||||||    
T  11415181 gagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctctaaaacaatctcacaagt 11415264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 28763406 - 28763477
Alignment:
Q  421 aaataagttgaaaaca-gcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||||| | |||| |||| || ||||||||||| |||||||| |||||||||||||||||||||    
T  28763406 aaataagttgaaaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaa 28763477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 926505 - 926571
Alignment:
Q  412 agcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaa 478  Q
    |||||||| ||||||| ||||||| |||| ||||||||| ||||| || ||| ||||||||||||||    
T  926505 agcttgtggaaataagctgaaaacggcttatgaacatgtcataagttgttttgataaattctcccaa 926571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 457
Target Start/End: Original strand, 20672775 - 20672825
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagc 457  Q
    |||||||||| |||||||||| |||||||||||| ||||||||| ||||||    
T  20672775 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 488
Target Start/End: Original strand, 27028840 - 27028938
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctg-aacatgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    |||||||||||   |||||||||||| |||||||||| |||||| ||||| || || ||||  ||||||| ||||| || |||||||||||| ||||||    
T  27028840 ttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaatttctcccaaacaatctcac 27028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 37444571 - 37444502
Alignment:
Q  293 cataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||| |||||||   ||||||||||||| |||||| ||||||||||| ||| | ||||||||||    
T  37444571 cataagcacttatcatgataa---gcgcttatgtataagctattactataacaaaagataaagtaaagttaaa 37444502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 479
Target Start/End: Original strand, 1930044 - 1930133
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaa 479  Q
    |||||||||||   ||||| || |||||||||||||| |||||||||||| ||||| |||| |||| ||| ||||| || ||||||||||    
T  1930044 ttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaa 1930133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 32841020 - 32840951
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctc 486  Q
    |||||||||| |||||||| ||| |||||| ||| ||||| || |||||||| |||||||||||||||||    
T  32841020 tgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctc 32840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 37353439 - 37353336
Alignment:
Q  258 ctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaata 357  Q
    ||||||| || |||| ||| ||||||||||| || |||||   |||||||||||||   ||||||||||| |  ||||||||||||||||| ||| ||||    
T  37353439 ctgtttggataaacaacttgatttgcagcttatagcataaatgcttatgatgataa---gcgcttatgtacaaactatttctataacaaaagata-aata 37353344  T
Q  358 aagttaaa 365  Q
    ||||||||    
T  37353343 aagttaaa 37353336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 490
Target Start/End: Complemental strand, 41606946 - 41606865
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||| || ||||||| |||||||| ||| ||||||||| |||||||| |||| ||  ||||||||||| || ||||||    
T  41606946 gagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttttcgtagtttctcccaaactgtttcacaa 41606865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 43045771 - 43045686
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||||||||||| ||||| | || || ||| ||||||| ||||||||  ||||| ||||||||||||||    
T  43045771 ttggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaacagtctcacaa 43045686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 5088877 - 5088957
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||| |  |||||||||||||||||||| || ||||||||||| ||| || |||||  ||||| | |||||||||    
T  5088877 tggagagcttattgaaataagttgaaaacagcttatggacatgttataaactgtttccataagctctccaagacagtctca 5088957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 493
Target Start/End: Original strand, 9700028 - 9700112
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| |||||||||| |||||||||||| || |||||| ||||  || ||||| ||  |||| |||| |||||||||||||    
T  9700028 gagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtg 9700112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 27754428 - 27754512
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||| |||||||||| ||||  || ||| | | ||||| |||| ||| |||||||| |||||||||| ||||||||||    
T  27754428 ttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaatagtctcacaa 27754512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 362
Target Start/End: Complemental strand, 41442615 - 41442525
Alignment:
Q  269 aacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagtt 362  Q
    |||||||||||||  ||||| || ||||| ||||||| |||||||  |   |||||||||||||| |||||||||||||| ||  |||||||||    
T  41442615 aacagcttaatttttagcttatagcataaacacttatcatgataagta---cttatgtataggctttttctataacaaaatattaaataaagtt 41442525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 493
Target Start/End: Complemental strand, 42215145 - 42215049
Alignment:
Q  389 tattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcac 488  Q
    |||||||||||||   |||||||||||| || ||||||| |||||||| ||| ||||||||        || |||||||| |||||||||||||| ||||    
T  42215145 tattttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatg--------tgttttcataagttctcccaaacagtgtcac 42215054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 43504774 - 43504869
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggttaagc 500  Q
    |||||||| ||| || ||||||| |||||||||||| | |||| ||  |||| || |||||| | |||||| |||||||| |||||||| ||||||    
T  43504774 cttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatcagttctccgaaacagtcacacaagtgcttaagc 43504869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 493
Target Start/End: Complemental strand, 44236869 - 44236782
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||||||| |||||||||| |||||| | |||  || |||||  | ||||  ||||||| |||||||| ||||||||||||||||    
T  44236869 ttggagagcttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcacaagtg 44236782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 1112790 - 1112836
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||| |||||||||||||||||| ||| ||||| ||||||    
T  1112790 gcttatgtatatgctatttctataacaaaagataaaataaggttaaa 1112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 32976358 - 32976400
Alignment:
Q  323 atgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||    
T  32976358 atgtatacgctatttctataacaaaagataaaataaagttaaa 32976400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 490
Target Start/End: Original strand, 8629499 - 8629564
Alignment:
Q  425 aagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||| ||| ||| ||||| ||||| || |||||||| ||||| ||||| |||||||||    
T  8629499 aagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctcacaa 8629564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 10758291 - 10758218
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||| ||| |||||| ||||| |||| || || |||||||| |||||||||||||  |||||||||||||||    
T  10758291 tgaaaacaagctgaaaaaagcttttgaaaattgtcataagctgttttcataaattctatcaaacagtctcacaa 10758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 11185246 - 11185295
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||  || |||||||||||||||| ||| |||||||||||||||    
T  11185246 tggagagctgatggaaataagttgaaaacaacttatgaacatgttataag 11185295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 14949905 - 14949974
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| |||||||||||| || |||||| ||||| |  ||||||||  ||||| ||||||||||||||    
T  14949905 aaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcacaa 14949974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 24558892 - 24558962
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||| | ||||| ||||| ||| |||| ||  |||||||  ||||||||||||||||||||||||    
T  24558892 aaataagttgaacatagcttatgaacgtgtcataaact--tttcataggttctcccaaacagtctcacaagtg 24558962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 490
Target Start/End: Original strand, 30918136 - 30918220
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||| || ||||||| |||||||| ||| |||| |||| | ||| || ||||||||  |||| |||||||||||||||    
T  30918136 cttggagagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgttttcataagctctctcaaacagtctcacaa 30918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 42597339 - 42597380
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||||||||| |||||||||||||||||| ||| ||||||||    
T  42597339 cttatgtataagctatttctataacaaaagataaaataaagt 42597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 493
Target Start/End: Complemental strand, 2458609 - 2458525
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| || ||||||  |||||||||||| ||||||||  ||||||||  ||||||| |||||| ||| | | |||||||||    
T  2458609 gagagcttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagttctccaaaagaatgtcacaagtg 2458525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 473
Target Start/End: Original strand, 3254264 - 3254316
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattct 473  Q
    ||||||| |||||||||||| ||||||||| |||||||| |||| ||| ||||    
T  3254264 aaataagctgaaaacagcttatgaacatgtcataagctgttttcttaagttct 3254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 4558737 - 4558781
Alignment:
Q  321 ttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaa 4558781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 11119138 - 11119090
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||| |||||||||||| | |||||||||||||||| ||| ||||||||    
T  11119138 ataatcgcttatgtatacgatatttctataacaaaagataaaataaagt 11119090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 14482133 - 14482181
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| |||||||||||  ||||||||||||||||| ||| ||||||||    
T  14482133 ataagtgcttatgtataaactatttctataacaaaagataaaataaagt 14482181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 487
Target Start/End: Complemental strand, 28784859 - 28784758
Alignment:
Q  388 ctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatg---ttataagctgctttcataaattctcccaaacagtc 484  Q
    ||||||||||||||   ||| |||||||||| |||||||| |||||| ||||| ||||||||   | ||||| || ||||||||  ||||||||| ||||    
T  28784859 ctattttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcataataagttgttttcataagctctcccaaaaagtc 28784761  T
Q  485 tca 487  Q
    |||    
T  28784760 tca 28784758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 30191172 - 30191100
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| ||||||||  || ||||||||| ||||| || || |||||  ||||||||||||||| |||||||    
T  30191172 aaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtg 30191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 37153029 - 37152977
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||||||||||||||   |||||||||||||||  ||| ||||||||||||    
T  37153029 ataagcgcttatgtataatatatttctataacaaagtataaaataaagttaaa 37152977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 43569199 - 43569271
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| ||||||||||||||| |||  |||| |||| ||| ||||| |||||||||||| || ||||| |||||    
T  43569199 aaattagttgaaaacagcttatgagaatgtaataacctgttttcaaaaattctcccaagcactctcaaaagtg 43569271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 20368241 - 20368142
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||| ||| ||||||||||||||||  ||||| ||||||||| ||||| || |||||||| |||||||||| ||||| ||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaatagtcttacaa 20368142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 419 - 493
Target Start/End: Original strand, 769175 - 769249
Alignment:
Q  419 gaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| ||||||||||||||||| ||||||||| ||||| || |||||||| |||  |||||||||||||||||||    
T  769175 gaaagtaagttgaaaacagcttatgaacatgtcataagatgttttcataagttcatccaaacagtctcacaagtg 769249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 481
Target Start/End: Original strand, 31624113 - 31624190
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattc-tcccaaaca 481  Q
    ||||||||  || ||||||||||||||||||||||| ||||||||| |||||||| |||||||| ||| |||||||||    
T  31624113 cttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttcttcccaaaca 31624190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 33887869 - 33887941
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||||||| ||| ||||||||| |||||||  |||||||||||||| |||||| | |||||||||    
T  33887869 aaataagttgaaaacaacttgtgaacatgtcataagctattttcataaattctctcaaacaatgtcacaagtg 33887941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 468
Target Start/End: Complemental strand, 28641791 - 28641733
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    ||||||| |||||||||| | |||||||||| |||||||||||||||||| ||||||||    
T  28641791 agagcttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataa 28641733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 6647390 - 6647463
Alignment:
Q  385 aatctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagct 458  Q
    ||||| |||||||||||   ||| |||||||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  6647390 aatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataagct 6647463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 493
Target Start/End: Complemental strand, 27595591 - 27595526
Alignment:
Q  428 ttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| ||||| ||||||||| ||||| || || |||||||||||||||||||||||| |||||    
T  27595591 ttgaaaatagcttatgaacatgtcataagttgtttccataaattctcccaaacagtctcataagtg 27595526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 493
Target Start/End: Complemental strand, 35070510 - 35070426
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| ||||||||||||||||||||||| ||| | ||   ||||||| ||||||   ||||||||||||||| ||||||||    
T  35070510 gagagcttatgaaaataagttgaaaacagcttatgatcttgccttaagctgttttcatttgttctcccaaacagtcccacaagtg 35070426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 493
Target Start/End: Complemental strand, 32171428 - 32171342
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| ||||| || ||||||| |||||| |||||||| || ||| |||||||| ||||||||  |||| ||||||||||| ||||||    
T  32171428 tggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcgcaagtg 32171342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 9559444 - 9559383
Alignment:
Q  430 gaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||| |||||| |||| ||||||| |||||||| |||||| ||||||||||||||    
T  9559444 gaaaacagcttatgaacaatgttgtaagctgttttcataacttctcctaaacagtctcacaa 9559383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 264248 - 264354
Alignment:
Q  255 gccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaataca 354  Q
    |||||||||| |||||||||| |||||||||||| || || |||  ||||| |||||||   | |||||| |||| |||||||||| | ||||| ||| |    
T  264248 gccctgtttggattaacagct-aatttgcagcttatagcacaagtgcttatcatgataa---gtgcttatatataagctatttctaaagcaaaagataaa 264343  T
Q  355 ataaagttaaa 365  Q
    |||||||||||    
T  264344 ataaagttaaa 264354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 9093695 - 9093643
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||| ||| |||||||||||| ||||| ||| ||||||||||||    
T  9093695 ataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaa 9093643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 492
Target Start/End: Complemental strand, 27693463 - 27693399
Alignment:
Q  428 ttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    ||||||| ||||| ||||||||| ||||| || || ||||||||||| |||| ||||||||||||    
T  27693463 ttgaaaatagcttatgaacatgtcataagttgtttccataaattctctcaaatagtctcacaagt 27693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 473
Target Start/End: Original strand, 1575931 - 1575986
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattct 473  Q
    |||||||||||| |||||||||| ||||||||| ||||| || |||||||| ||||    
T  1575931 tgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 1575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 32206057 - 32205986
Alignment:
Q  408 ggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaa 479  Q
    |||||||||||||||||||| | |||||| |||  ||||||||||| ||||  |||||||| ||||| ||||    
T  32206057 ggagagcttgtgaaaataagataaaaacaacttaagaacatgttatcagctattttcataagttctctcaaa 32205986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 4420666 - 4420716
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataa 455  Q
    |||||||||||| || ||||||| |||||||||||| ||||||||| ||||    
T  4420666 cttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataa 4420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 493
Target Start/End: Complemental strand, 8420242 - 8420156
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||| || |||||||||||||| ||||| || |||||| |||||||  ||  ||||  |||| | ||||||||||||||||    
T  8420242 tggagagcttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtg 8420156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 10616745 - 10616683
Alignment:
Q  420 aaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacag 482  Q
    |||||||  |||||||||||| ||||||||| ||||| || ||| |||| |||||||||||||    
T  10616745 aaaataaactgaaaacagcttatgaacatgtcataaggtgttttgataagttctcccaaacag 10616683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 490
Target Start/End: Complemental strand, 26559259 - 26559201
Alignment:
Q  432 aaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||| ||||||| | ||||| || |||||||| |||| ||||||||||||||||    
T  26559259 aaacagcttgtgaacatatcataagttgttttcataagttcttccaaacagtctcacaa 26559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 493
Target Start/End: Original strand, 2456976 - 2457052
Alignment:
Q  416 tgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||| |||| ||||||||||||||| || |||| ||||||||||||| || || | || ||||||||||| |||||||    
T  2456976 tgtggaaatgagttgaaaacagcttatggacatattataagctgcttccacaagtgct-ccaaacagtcttacaagtg 2457052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 492
Target Start/End: Complemental strand, 2460196 - 2460111
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||||||||| || |||||||||||||||| |||    |||||| ||||| || || |||||  |||| |||||||||||||||||    
T  2460196 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagt 2460111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 492
Target Start/End: Complemental strand, 8035181 - 8035108
Alignment:
Q  419 gaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    ||||||||||||||||||  || ||| ||||| ||||| || |||| ||| |||||||||| |||||| |||||    
T  8035181 gaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttctcccaaatagtctctcaagt 8035108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 473
Target Start/End: Original strand, 1575786 - 1575842
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgtt-ataagctgctttcataaattct 473  Q
    ||||||||||||||||||| ||| || ||||||| |||||||| |||||||| ||||    
T  1575786 tgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataagttct 1575842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 9559680 - 9559628
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||||||| | |||||||||| ||||| ||| |||||| |||||    
T  9559680 ataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaa 9559628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 9668029 - 9667981
Alignment:
Q  408 ggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    ||||||||| || |||||||||||||||||||| || |||||| |||||    
T  9668029 ggagagcttatggaaataagttgaaaacagcttatggacatgtcataag 9667981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 10452493 - 10452453
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaa 359  Q
    ||||||||||| |||||||||||||||||| ||| ||||||    
T  10452493 gcttatgtataagctatttctataacaaaatataaaataaa 10452453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 10657449 - 10657497
Alignment:
Q  429 tgaaaacagcttctgaacatgttataagctgctttcataaattctccca 477  Q
    |||||||| ||| ||||||||||||||  || |||||||||||||||||    
T  10657449 tgaaaacaacttatgaacatgttataaattgttttcataaattctccca 10657497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 458
Target Start/End: Original strand, 13908491 - 13908539
Alignment:
Q  410 agagcttgtgaaaataagttgaaaacagcttctgaacatgttataagct 458  Q
    ||||||| |||||||||| ||||||||||||  |||||||| |||||||    
T  13908491 agagcttatgaaaataagctgaaaacagcttacgaacatgtcataagct 13908539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 33116647 - 33116695
Alignment:
Q  445 acatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||| ||||| || |||||||||||| | ||||||||||||||||||    
T  33116647 acatgtcataagttgttttcataaattccctcaaacagtctcacaagtg 33116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 491
Target Start/End: Complemental strand, 25670633 - 25670547
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaag 491  Q
    ||||||||||||||||||||||| ||||||||  || | ||||||| ||||| || |||||||| || || ||||||||||||||||    
T  25670633 cttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaag 25670547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 21568541 - 21568456
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| || || ||||||||||| ||||| |||| || ||||||||||| |||||||| |||||||||||||||||||||    
T  21568541 ttggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaa 21568456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 33678789 - 33678889
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   |||||| | ||||||||||||||||||||||| ||  ||||| |||||||||| || |||||||| ||||||||||  ||||||||    
T  33678789 ttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctcccaaattgtctcaca 33678888  T
Q  490 a 490  Q
    |    
T  33678889 a 33678889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 500
Target Start/End: Complemental strand, 3836729 - 3836635
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggttaagc 500  Q
    |||||||||||  ||||||||||||||| || |||| || | |||| |||||||  |||||||| |||||||||||||| ||||||||| ||||||    
T  3836729 cttggagagctaatgaaaataagttgaagacggcttatgta-atgtcataagctattttcataagttctcccaaacagtttcacaagtgcttaagc 3836635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 19022631 - 19022546
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||||||||| ||| ||| |||| || || ||||| || ||||||||||||||||||||| ||||||||    
T  19022631 ttggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaaacaatctcacaa 19022546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 493
Target Start/End: Complemental strand, 13960764 - 13960682
Alignment:
Q  411 gagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||||||||||||| |||| | ||||| || || |||||||||||| ||||||||  |||| |||| |||||| ||||||    
T  13960764 gagcttgtgaaaataagctgaacatagcttatggacttgttataagctgttttcataagctctctcaaatagtctcgcaagtg 13960682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 489
Target Start/End: Complemental strand, 22387941 - 22387859
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||| || ||||||||| ||||||| || | ||||||  ||||| || ||||||||  |||||||||||||||||||    
T  22387941 tggagagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctcaca 22387859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 529384 - 529449
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 456  Q
    |||||||||||   |||||||||||| |||||||| |||||||||||||| ||||| ||| |||||    
T  529384 ttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataag 529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 19302597 - 19302524
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||||||||| || || |||| || || |||||||| ||||||||||||||||||| | ||||||||    
T  19302597 tgaaaataagttgaaaaaagtttatgaaaattgtcataagctgttttcataaattctcccaaatattctcacaa 19302524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 484
Target Start/End: Complemental strand, 22551466 - 22551373
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtc 484  Q
    |||||||||| |  |||||||||||| || ||||||| |||||||| | | ||||||||| |||||||| ||||| ||  |||| |||||||||    
T  22551466 ttttcataagtaatcttggagagcttatgtaaataagctgaaaacaacatttgaacatgtcataagctgttttcaaaatctctctcaaacagtc 22551373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 487
Target Start/End: Original strand, 24967093 - 24967166
Alignment:
Q  414 cttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    |||||||||||||| |||||||| |||||| | |||||||||| || || |||||  ||| |||||||||||||    
T  24967093 cttgtgaaaataagctgaaaacaacttctggatatgttataagttgtttccataatctcttccaaacagtctca 24967166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 7612337 - 7612393
Alignment:
Q  257 cctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataa 313  Q
    ||||||| ||| |||| ||||||||||||||| || ||||||||||||| |||||||    
T  7612337 cctgtttcaataaacaacttaatttgcagcttatagcataagcacttatcatgataa 7612393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 471
Target Start/End: Original strand, 30316999 - 30317051
Alignment:
Q  419 gaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaatt 471  Q
    |||||||||||||||||||||| | ||||| ||||||| || |||||||||||    
T  30316999 gaaaataagttgaaaacagcttattaacattttataagttgttttcataaatt 30317051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 33894666 - 33894738
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||| ||| || |||||| ||| |||| ||||||||  |||| ||||||||||||||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtg 33894738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 40009347 - 40009453
Alignment:
Q  255 gccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaataca 354  Q
    ||||||||||||| |||| |||||||| ||||||  | |||||| |||||| ||||| |   ||||||||||||| ||| ||| |||||||||| | | |    
T  40009347 gccctgtttgaataaacaacttaattttcagcttaca-cataagtacttatcatgatta---gcgcttatgtataagctgtttttataacaaaagacaaa 40009442  T
Q  355 ataaagttaaa 365  Q
    |||||||||||    
T  40009443 ataaagttaaa 40009453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 49060479 - 49060519
Alignment:
Q  321 ttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagt 49060519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 5373157 - 5373204
Alignment:
Q  314 taagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||||    
T  5373157 taagtgcttatgtatatgctatttctataacaaaagataaaataaagt 5373204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 473
Target Start/End: Complemental strand, 15740445 - 15740390
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattct 473  Q
    |||||||||||| |||||||||| ||||||||| ||||| || |||||||| ||||    
T  15740445 tgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 15740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 25596042 - 25596141
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||||||| ||||||||||||||||||| |||   ||| ||| |||||||| ||| |||  || |||| |||| ||||||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaacaacttagtaacttgtcataagctgtttttataggttttccctaacaatctcacaa 25596141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 30535599 - 30535674
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||  ||||||||||||  |||||| | ||||| || |||||||| |||||| |||||||||| ||||||    
T  30535599 tgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctctcaagtg 30535674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 490
Target Start/End: Original strand, 17248580 - 17248661
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||| |||||||||| | ||| |||||| |||||| |||||||||||| ||| |||| |||||||||||||||| ||||    
T  17248580 gagaacttatgaaaataaggt-aaatcagcttatgaacaatgttataagctgtttttataagttctcccaaacagtcttacaa 17248661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 493
Target Start/End: Original strand, 23214880 - 23214966
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||| ||| |||| ||||| |||| | ||||| || | |||| ||||| || |||||||||||||| |||||||||||| |||||    
T  23214880 tggagatcttatgaacataagctgaatagagcttatggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtg 23214966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 483
Target Start/End: Complemental strand, 425869 - 425792
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctg-ctttcataaattctcccaaacagt 483  Q
    ||||||||  ||||||||||| || ||| ||||| ||||||||| ||||||||  |||| ||| ||||||||||||||    
T  425869 tggagagccagtgaaaataagctggaaatagcttatgaacatgtcataagctgtttttcgtaagttctcccaaacagt 425792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 493
Target Start/End: Original strand, 8094368 - 8094417
Alignment:
Q  444 aacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||| ||||||||| |||| |||| |||||||||||||    
T  8094368 aacatgtcataagctgttttcataaaatctctcaaatagtctcacaagtg 8094417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 478
Target Start/End: Complemental strand, 11619204 - 11619131
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaa 478  Q
    ||||||| ||| ||||| ||||||||||| ||||| |||| | ||| ||||| || ||||||||||||||||||    
T  11619204 ttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctcccaa 11619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 490
Target Start/End: Complemental strand, 36598387 - 36598318
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| |||||||||||| ||||||||| ||||| || || |||||  |||| |||||| ||||||||    
T  36598387 aaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaa 36598318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 474
Target Start/End: Original strand, 39967956 - 39968013
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctc 474  Q
    ||||||||||||||||||||||| ||||| |||  |||||||| |||||||| |||||    
T  39967956 tgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 42656445 - 42656494
Alignment:
Q  312 aataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||| ||||| |||| |||||||||||||||||| ||| ||||||||    
T  42656445 aataagcacttatatataagctatttctataacaaaagataaaataaagt 42656494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 43153030 - 43152989
Alignment:
Q  324 tgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaa 43152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 489
Target Start/End: Original strand, 48140270 - 48140311
Alignment:
Q  448 tgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    ||||| |||||| ||||||| |||||||||||||||||||||    
T  48140270 tgttacaagctgttttcatacattctcccaaacagtctcaca 48140311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 12110252 - 12110304
Alignment:
Q  255 gccctgtttgaattaacagcttaatttgcagcttgtaacataagcacttatga 307  Q
    |||||||||  || |||||||||||||||| ||| || |||||||||||||||    
T  12110252 gccctgtttcgataaacagcttaatttgcaacttatagcataagcacttatga 12110304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 473
Target Start/End: Complemental strand, 15740590 - 15740534
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgtt-ataagctgctttcataaattct 473  Q
    ||||||||||||||||||| ||| || ||||||| |||||||| |||||||| ||||    
T  15740590 tgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataagttct 15740534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 27508348 - 27508292
Alignment:
Q  436 agcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    ||||| || ||||||||||||  | || ||||||||||| |||||||||||||||||    
T  27508348 agcttatggacatgttataagtggtttccataaattctctcaaacagtctcacaagt 27508292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 28165116 - 28165156
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaaca 447  Q
    |||||||||| || |||||||||||||||||||| ||||||    
T  28165116 tggagagcttatggaaataagttgaaaacagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 29574632 - 29574584
Alignment:
Q  445 acatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||| |||||||| || ||||| |||||| |||||||||||||||||    
T  29574632 acatgtcataagctgtttccataagttctccgaaacagtctcacaagtg 29574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 33894555 - 33894599
Alignment:
Q  314 taagcgcttatgtataggctatttctataacaaaaaatacaataa 358  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 34035926 - 34036026
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||||||   ||| |||| |||| |||||||||||||||||| ||| ||||| |||| ||||| |  |||||||| |||| ||||  |||||||||    
T  34035926 ttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcaca 34036025  T
Q  490 a 490  Q
    |    
T  34036026 a 34036026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 34672941 - 34672893
Alignment:
Q  257 cctgtttgaattaacagcttaatttgcagcttgtaacataagcacttat 305  Q
    |||||||| || ||||||||||||| |||||| || |||||||||||||    
T  34672941 cctgtttggataaacagcttaattttcagcttatagcataagcacttat 34672893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 46213734 - 46213782
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||| | |||||||||||||||||| ||| ||||||||    
T  46213734 ataagtgcttatgtaaaagctatttctataacaaaatataaaataaagt 46213782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 47130846 - 47130802
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaac 435  Q
    |||||||||||   |||||||| ||||||||||||||||||||||    
T  47130846 ttttcataagctatcttggagaacttgtgaaaataagttgaaaac 47130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 2996582 - 2996684
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||||| | ||||||||||||||||| ||||| || |||||| ||||| || ||||||||  |||| |||||||||||| ||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaa 2996681  T
Q  491 gtg 493  Q
    |||    
T  2996682 gtg 2996684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 490
Target Start/End: Complemental strand, 28300363 - 28300261
Alignment:
Q  388 ctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 487  Q
    ||||||||||| ||   |||| ||||||| ||||||||||||||||||| |||  |||||||| ||| |||| |||||||||||||| ||| ||||| ||    
T  28300363 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctctcaatcagtcaca 28300264  T
Q  488 caa 490  Q
    |||    
T  28300263 caa 28300261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 364
Target Start/End: Complemental strand, 42641813 - 42641721
Alignment:
Q  269 aacagcttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaa 364  Q
    |||||||||||||||||||| | |||||||||||||| |||   ||||| | ||||||||| |||||||| ||||||||| ||| ||||| |||||    
T  42641813 aacagcttaatttgcagcttattacataagcacttatcatg---ataagtgtttatgtataagctatttccataacaaaagataaaataatgttaa 42641721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 391 - 493
Target Start/End: Complemental strand, 50742897 - 50742795
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   | |||||||||| ||||||| ||||||||||||  | ||||||||| || | ||| |||||||| ||||| |||||||||| ||||    
T  50742897 ttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 50742798  T
Q  491 gtg 493  Q
    |||    
T  50742797 gtg 50742795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 2987085 - 2987171
Alignment:
Q  275 ttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaa 364  Q
    |||||||||||||| |||||||||   |||| |||   |||||| ||||| |||| |||||||||| ||||||||||| |||||||||||    
T  2987085 ttaatttgcagcttataacataagtgtttatcatg---ataagcacttatttataagctatttctacaacaaaaaataaaataaagttaa 2987171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 491
Target Start/End: Complemental strand, 7368086 - 7368015
Alignment:
Q  420 aaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaag 491  Q
    |||||| ||||||| |||||| | ||||||| |||||||| |||||| |  |||||||||||||||||||||    
T  7368086 aaaatatgttgaaagcagcttataaacatgtcataagctgttttcatgagctctcccaaacagtctcacaag 7368015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 492
Target Start/End: Complemental strand, 21043258 - 21043195
Alignment:
Q  429 tgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||||||||||| ||||| ||| |||||||| || |||||  ||||||||||||||||||||||    
T  21043258 tgaaaacagcttatgaacgtgtcataagctgtttccataacctctcccaaacagtctcacaagt 21043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 23819098 - 23819197
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||| ||||||| |  ||||||| |||||||| ||| || |||||| |||||||| |||| |||| ||| ||||||||||||||||    
T  23819098 ttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactcttccaaacagtctcacaa 23819197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 42461275 - 42461362
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||| ||||| |||||||||| ||||| || ||| |||||| || ||| |||  |||||||| |||||||||||||||||| |||||    
T  42461275 ttggacagcttatgaaaataagctgaaatcaacttatgaacacgtcataggctattttcataagttctcccaaacagtctcataagtg 42461362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 490
Target Start/End: Original strand, 1706645 - 1706731
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||| ||||| ||||||||||||| ||| ||||| ||||| |||  |||||||| |||||||| ||||| ||||| |||||||||    
T  1706645 cttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctctcaaaccgtctcacaa 1706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 17223067 - 17223009
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaa 479  Q
    |||||||||||||||||||| ||||||||| |||| ||  ||||||||||| |||||||    
T  17223067 aaataagttgaaaacagcttatgaacatgtcataaactattttcataaattatcccaaa 17223009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 22236150 - 22236060
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggtta 497  Q
    |||||||||| ||||||||||  ||||||||||  ||||||||| | |||||| ||| |||   ||||||||||||| || ||||||||||    
T  22236150 tggagagcttatgaaaataagcagaaaacagctcatgaacatgtcacaagctgttttaataggctctcccaaacagtttcgcaagtggtta 22236060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 25487678 - 25487636
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  25487678 gcttatgtataagctatttctataacaaaaaataaaataaagt 25487636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 37864430 - 37864336
Alignment:
Q  374 gcataagccacaatctattttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataa 468  Q
    |||||||| | || |||||||| ||||| | | |||  |||||||||||||||| |||||||||||| ||||||| | |||||||| ||| ||||    
T  37864430 gcataagctataagctattttcgtaagctgtcctggcaagcttgtgaaaataaggtgaaaacagcttatgaacatttaataagctgtttttataa 37864336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 474
Target Start/End: Complemental strand, 18782813 - 18782744
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctc 474  Q
    |||||||| ||||||||||||||||||||| ||||    ||||||| ||||| ||||||||||| |||||    
T  18782813 cttggagaacttgtgaaaataagttgaaaatagctgaaaaacatgtcataagttgctttcataagttctc 18782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 497
Target Start/End: Complemental strand, 32769676 - 32769587
Alignment:
Q  408 ggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggtta 497  Q
    ||||||||||   ||||||| ||||||||| || || ||||||||||||||  || | |||||||||  |||||| ||||||||||||||    
T  32769676 ggagagcttgacgaaataaggtgaaaacagtttatggacatgttataagctatttccgtaaattctcttaaacagcctcacaagtggtta 32769587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 49202681 - 49202754
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||||||||||| ||| ||||| |||| |||| ||| ||| |||| |||| ||||||||||||||||    
T  49202681 tgaaaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttcttccaaacagtctcacaa 49202754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 54426067 - 54426152
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||| ||||||| ||||| |||| || || |||||||| |||| ||| ||||||||| |||||||||||    
T  54426067 ttggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagcagtctcacaa 54426152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 1408327 - 1408279
Alignment:
Q  445 acatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||| |||||||| |||||||||||||| |||||||||||| |||||    
T  1408327 acatgtaataagctgttttcataaattctctcaaacagtctcataagtg 1408279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 6364080 - 6364128
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    |||||| |||||||||| |||||||||||||||||| ||| ||||||||    
T  6364080 ataagcacttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 39178297 - 39178225
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||||||| ||| | ||| ||| |||||| | |||||||| |||||||||||||| ||| |||||    
T  39178297 aaataagttgaaaacatcttattaacgtgtcataagcggttttcataagttctcccaaacagtgtcaaaagtg 39178225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 47800632 - 47800731
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||| ||||||| |||||||||| ||||||| |||| | |||||   |||||||| |||||||| | ||| ||||||||||| |||    
T  47800632 ttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttataaacat---ataagctgttttcataattactctcaaacagtctcgcaa 47800728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 490
Target Start/End: Complemental strand, 6987786 - 6987703
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||| || |||||||||||||| || || || |||||| ||||| ||  | |||||  ||||||||||||||||||||    
T  6987786 tggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcacaa 6987703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 490
Target Start/End: Original strand, 29388809 - 29388892
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||||||| |||||||||  |||||| || |||||||||  ||||||| ||||  || ||||||| || ||||||||||    
T  29388809 tggagagcttgtggaaataagtttgaaacagattatgaacatgtcttaagctgttttcgcaagttctccctaatagtctcacaa 29388892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 43932467 - 43932538
Alignment:
Q  414 cttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtct 485  Q
    |||||||||||||| |||||||| ||| || |||||| || |||||||| | |||| ||||| |||||||||    
T  43932467 cttgtgaaaataagatgaaaacaacttatggacatgtcatgagctgcttccgtaaactctcctaaacagtct 43932538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 513
Target Start/End: Complemental strand, 48719425 - 48719331
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtggttaagctcaactaagtcaa 513  Q
    |||||||||| ||||||||||||  |||||||| |||| |   |||||||| ||| | |||||| |||||||||| | ||||||||| ||||||||    
T  48719425 tgaaaataagctgaaaacagcttacgaacatgtcataaaccattttcataagttccctcaaacaatctcacaagt-gataagctcaaataagtcaa 48719331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 490
Target Start/End: Original strand, 56249561 - 56249632
Alignment:
Q  419 gaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||||||| ||||| |||| |||| |||||||| ||| |||| || | ||||||| ||||||||    
T  56249561 gaaaataagttgaaaaaagcttatgaaaatgtcataagctgttttgataagttgttccaaacaatctcacaa 56249632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 2980610 - 2980572
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaat 351  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  2980610 ataagtgcttatgtataagctatttctataacaaaaaat 2980572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 493
Target Start/End: Complemental strand, 4798627 - 4798525
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||   |||||||||||| || ||||||| | |||||||||| || |||||| | |||| | || |||||  ||| || |||||||||||||    
T  4798627 ttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttccataagctcttcctaacagtctcacaa 4798528  T
Q  491 gtg 493  Q
    |||    
T  4798527 gtg 4798525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 490
Target Start/End: Complemental strand, 13126619 - 13126537
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctga-acatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||| ||| |||||||||| |||||| ||||| ||| | |||| |||||||| ||| |||| |||| ||||||||||||||||    
T  13126619 gagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaa 13126537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 493
Target Start/End: Complemental strand, 20936274 - 20936188
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| || || ||||||| |||||||||||| ||||||| | ||||| || |||||||| || | | ||||||| |||||||||    
T  20936274 tggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcataagttttacgaaacagtgtcacaagtg 20936188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 467
Target Start/End: Complemental strand, 30066813 - 30066751
Alignment:
Q  405 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcata 467  Q
    |||||||||||| | |||| ||| ||||||||| || ||||||| |||||||||| |||||||    
T  30066813 cttggagagcttataaaaacaagctgaaaacagattatgaacatattataagctgttttcata 30066751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 30338725 - 30338679
Alignment:
Q  319 gcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||||||||  ||||||||||||||||| ||| ||||||||||||    
T  30338725 gcttatgtataaactatttctataacaaaagatagaataaagttaaa 30338679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 480
Target Start/End: Complemental strand, 35571692 - 35571602
Alignment:
Q  391 ttttcataagcagacttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaac 480  Q
    |||||||||||   ||| |||| |||||||||||||||||||| |||||  |||||| ||| |||||||| ||| | || |||||||||||    
T  35571692 ttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaaagttctcccaaac 35571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 1555024 - 1554975
Alignment:
Q  436 agcttctgaacatgttataagctgctttcataaattctcccaaacagtct 485  Q
    ||||| ||||||||| |||||||  |||||||||||||| ||||||||||    
T  1555024 agcttatgaacatgtcataagctattttcataaattctctcaaacagtct 1554975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 21731690 - 21731617
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||| ||||||||||| || || |||| || || |||||||| |||||||| |||||||||||| ||||||||    
T  21731690 tgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctcccaaacaatctcacaa 21731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 25904269 - 25904184
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| | |||||||| |||||| ||||| |||| | ||  |||||||| ||||||||  ||||||||||||||||||||    
T  25904269 ttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaa 25904184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 492
Target Start/End: Complemental strand, 27123397 - 27123312
Alignment:
Q  407 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagt 492  Q
    |||||||||| || |||||||||||||||| |||    |||||| ||||| || || |||||  |||| |||||||||||||||||    
T  27123397 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagt 27123312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 39603216 - 39603131
Alignment:
Q  406 ttggagagcttgtgaaaataagttgaaaacagcttctgaacat-gttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||| ||| ||||||||| || |||| ||||| | || || || |||||||| |||| ||| |||||||||||||||||||||    
T  39603216 ttggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctcccaaacagtctcacaa 39603131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 490
Target Start/End: Complemental strand, 49939981 - 49939912
Alignment:
Q  422 aataagttgaaaacagcttctgaac-atgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||| |||||||||||| ||||| |||| |||||||  |||||||| |||| ||||| ||||||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcacaa 49939912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 54069451 - 54069378
Alignment:
Q  418 tgaaaataagttgaaaacagcttctgaaca-tgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    |||||||||||| |||||||||| |||| | |||| ||||||| ||||| |||| || |||||||||| |||||    
T  54069451 tgaaaataagttaaaaacagcttatgaaaattgttgtaagctgttttcaaaaatcctaccaaacagtcccacaa 54069378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 54392950 - 54392906
Alignment:
Q  320 cttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  54392950 cttatgtataagctatttctataataaaaaata-aataaagttaaa 54392906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 7601690 - 7601742
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||||||||||||||| |||||| ||||| ||||  ||| ||||||||||||    
T  7601690 ataagcgcttatgtataagctattcctatagcaaaggataaaataaagttaaa 7601742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 11264328 - 11264408
Alignment:
Q  409 gagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcaca 489  Q
    |||||||| || ||||||||||||||||| || || |||||| ||||| || ||  |||   |||||||||||||||||||    
T  11264328 gagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtctcaca 11264408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 17751297 - 17751226
Alignment:
Q  274 cttaatttgcagcttgtaacataagcacttatgatgataataagcgcttatgtataggctatttctataacaaaa 348  Q
    ||||| ||||||||| || ||||||||||| | |||||||   |||||||| |||| ||||||||||||| ||||    
T  17751297 cttaaattgcagcttatagcataagcacttgtaatgataa---gcgcttatttataagctatttctataataaaa 17751226  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 493
Target Start/End: Original strand, 22471353 - 22471385
Alignment:
Q  461 tttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||| ||||||||||||||||||||||||    
T  22471353 tttcataagttctcccaaacagtctcacaagtg 22471385  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 487
Target Start/End: Original strand, 23319923 - 23319959
Alignment:
Q  451 tataagctgctttcataaattctcccaaacagtctca 487  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  23319923 tataagctgttttcataacttctcccaaacagtctca 23319959  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 23503490 - 23503542
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagttaaa 365  Q
    ||||| |||||||||||  ||| ||||||||||||| ||| ||||||||||||    
T  23503490 ataagtgcttatgtataatctaattctataacaaaatataaaataaagttaaa 23503542  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 47970249 - 47970297
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||||| |||||||||||||||||| ||| ||| ||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaaatgaagt 47970297  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 493
Target Start/End: Original strand, 50298563 - 50298626
Alignment:
Q  429 tgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    |||||||||||| ||||||||| |||||||  ||| |||| || | |||||||||||||||||||    
T  50298563 tgaaaacagcttatgaacatgtcataagct-attttataagtttttccaaacagtctcacaagtg 50298626  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 50800061 - 50799989
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtg 493  Q
    ||||||| |||||||||||| |  |||||| ||||| || || ||| | |||||||||||| |||||||||||    
T  50800061 aaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctcccaaacaatctcacaagtg 50799989  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 51044590 - 51044550
Alignment:
Q  321 ttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||||||| |||||||||||||||||| ||| ||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagt 51044550  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 52172785 - 52172833
Alignment:
Q  442 tgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 490  Q
    ||||||||| |||||||| |||||||| || |||| |||||||||||||    
T  52172785 tgaacatgtcataagctgttttcataagttttccccaacagtctcacaa 52172833  T

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Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 2798 - 2843
Alignment:
Q  414 cttgtgaaaataagttgaaaacagcttctgaacatgttataagctg 459  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  2798 cttgtgaaaataagttgaaaatagcttgtgaacatgtcataagctg 2843  T

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Target: scaffold0590 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 1213 - 1165
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||||| |||||||||||||||||| ||| ||||||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaaataaagt 1165  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 2762 - 2810
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagt 361  Q
    ||||| ||||||||||| |||||||||||||||||| ||| ||||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaaataaagt 2810  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 473
Target Start/End: Complemental strand, 98671 - 98619
Alignment:
Q  421 aaataagttgaaaacagcttctgaacatgttataagctgctttcataaattct 473  Q
    |||||||||||||||||||| ||||||||| |||||||  |||| ||||||||    
T  98671 aaataagttgaaaacagcttatgaacatgtcataagctattttcgtaaattct 98619  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 104273 - 104223
Alignment:
Q  313 ataagcgcttatgtataggctatttctataacaaaaaatacaataaagtta 363  Q
    |||| |||||||||||| | |||||||||||||||||||| ||||| ||||    
T  104273 ataaacgcttatgtataagttatttctataacaaaaaataaaataatgtta 104223  T

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