View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9021_low_41 (Length: 241)

Name: NF9021_low_41
Description: NF9021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9021_low_41
NF9021_low_41
[»] chr8 (10 HSPs)
chr8 (131-230)||(45098749-45098848)
chr8 (1-75)||(45098904-45098978)
chr8 (5-74)||(6526184-6526253)
chr8 (1-68)||(39049337-39049404)
chr8 (1-62)||(2487952-2488013)
chr8 (6-65)||(7918722-7918781)
chr8 (1-74)||(6950387-6950460)
chr8 (31-75)||(1561372-1561416)
chr8 (6-74)||(16162830-16162898)
chr8 (7-67)||(43504822-43504882)
[»] chr4 (4 HSPs)
chr4 (6-73)||(18628486-18628553)
chr4 (1-74)||(42641571-42641644)
chr4 (42-74)||(1075564-1075596)
chr4 (12-64)||(28615411-28615462)
[»] chr7 (4 HSPs)
chr7 (6-59)||(30535633-30535686)
chr7 (1-55)||(36537973-36538027)
chr7 (1-74)||(23214920-23214993)
chr7 (42-74)||(529468-529500)
[»] chr2 (7 HSPs)
chr2 (1-74)||(787397-787470)
chr2 (1-74)||(4350755-4350828)
chr2 (1-73)||(13866943-13867015)
chr2 (1-74)||(2964741-2964814)
chr2 (1-74)||(28803462-28803535)
chr2 (1-65)||(12140597-12140661)
chr2 (1-65)||(40145517-40145581)
[»] chr6 (3 HSPs)
chr6 (31-75)||(34429645-34429689)
chr6 (1-74)||(2455875-2455948)
chr6 (1-61)||(32577931-32577991)
[»] chr5 (5 HSPs)
chr5 (31-74)||(10771820-10771863)
chr5 (1-74)||(2568723-2568796)
chr5 (6-67)||(4273316-4273377)
chr5 (1-66)||(12459941-12460006)
chr5 (42-74)||(34117480-34117512)
[»] chr1 (4 HSPs)
chr1 (6-61)||(4033962-4034017)
chr1 (31-74)||(35017677-35017720)
chr1 (5-64)||(36070250-36070309)
chr1 (9-74)||(31517672-31517737)
[»] chr3 (4 HSPs)
chr3 (1-66)||(8797752-8797816)
chr3 (2-67)||(50211801-50211866)
chr3 (8-68)||(41644383-41644443)
chr3 (6-74)||(44014730-44014798)


Alignment Details
Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 45098848 - 45098749
Alignment:
Q  131 tcagactctatatggtagttctttagttggtgatatttactgtgatcaatttctgctatggataggtgggattctgggactaatgttggtgaatttgatg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45098848 tcagactctatatggtagttctttagttggtgatatttactgtgatcaatttctgctatggataggtgggattctgggactaatgttggtgaatttgatg 45098749  T

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Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45098978 - 45098904
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataaa 75  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45098978 atgtcataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataaa 45098904  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 6526253 - 6526184
Alignment:
Q  5 tataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||||||||||||| || ||||||  |||||||||| |||| | ||||||||||||||| ||||||||||    
T  6526253 tataagttgttttcctaagttctctcaaacaatctcacaagggcttatgccagtagataggctcgaataa 6526184  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39049337 - 39049404
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctc 68  Q
    ||||||||||||||||||||| | | ||  |||||||||| ||| ||||||||| |||||||||||||    
T  39049337 atgttataagttgttttcataagctttcacaaacaatctcacaaatgtttatgctagtagataagctc 39049404  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2488013 - 2487952
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagat 62  Q
    ||||||||||||||||||||| ||||||  ||||| |||| |||||| ||||| ||||||||    
T  2488013 atgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagat 2487952  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 7918781 - 7918722
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataag 65  Q
    |||||||||||||||| | ||||  ||||| |||| ||||||||||||| ||||||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgctagtagataag 7918722  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6950387 - 6950460
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||| ||||||| |||| | ||||  |||||||||| ||| ||||||||||||||||||| ||| |||||    
T  6950387 atgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactcaaataa 6950460  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 1561372 - 1561416
Alignment:
Q  31 aaacaatctctcaagtgtttatgccagtagataagctcgaataaa 75  Q
    |||||||||| ||||||||||||||| |||||||| || ||||||    
T  1561372 aaacaatctcacaagtgtttatgccattagataagatcaaataaa 1561416  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 16162830 - 16162898
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    ||||| |||||||||| ||| ||  ||||| |||| ||||||||||||| ||||||||| ||| |||||    
T  16162830 ataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataa 16162898  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 43504822 - 43504882
Alignment:
Q  7 taagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagct 67  Q
    ||||||||||||||  |||||| |||||| || | |||||| ||| |||||||||||||||    
T  43504822 taagttgttttcatcagttctccgaaacagtcacacaagtgcttaagccagtagataagct 43504882  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 18628553 - 18628486
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaata 73  Q
    |||||||||||||||| | ||||  ||||| |||| |||||||||||| |||||||||||||| ||||    
T  18628553 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42641644 - 42641571
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||| |||||||||| ||||| | ||||| | || |||||||| | |||||||||||||||| |||||    
T  42641644 atgtcataaggtgttttcataagttcttgaaaacagtatcacaagtgttcacgccagtagataagctcaaataa 42641571  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 1075564 - 1075596
Alignment:
Q  42 caagtgtttatgccagtagataagctcgaataa 74  Q
    ||||||||||||||||||||||||||| |||||    
T  1075564 caagtgtttatgccagtagataagctcaaataa 1075596  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 28615411 - 28615462
Alignment:
Q  12 tgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataa 64  Q
    |||||||||| ||||||  |||||||||| ||||||||||||| |||||||||    
T  28615411 tgttttcataagttctcc-aaacaatctcacaagtgtttatgctagtagataa 28615462  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 30535633 - 30535686
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagta 59  Q
    |||||||||||||||| ||||||  ||||| ||||||||||||||||| |||||    
T  30535633 ataagttgttttcataagttctccaaaacagtctctcaagtgtttatgtcagta 30535686  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36537973 - 36538027
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgcc 55  Q
    |||| ||||||||||| |||| ||||||  |||||||||| ||||||||||||||    
T  36537973 atgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatgcc 36538027  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23214920 - 23214993
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||||||||||||||  |||||  ||||| ||||  |||||||||||| |||||||||| || |||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataa 23214993  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 529468 - 529500
Alignment:
Q  42 caagtgtttatgccagtagataagctcgaataa 74  Q
    ||||||||||||||||||||||||||| |||||    
T  529468 caagtgtttatgccagtagataagctcaaataa 529500  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 787397 - 787470
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||| |||||||||| ||||||  ||||| | || |||||| ||||||||||||||| ||||||||||    
T  787397 atgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagatatgctcgaataa 787470  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4350755 - 4350828
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||| |||||||||| ||||||  ||||||||||| ||||| ||||| ||||||| |||||| |||||    
T  4350755 atgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtagagaagctcaaataa 4350828  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13866943 - 13867015
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaata 73  Q
    |||| ||| ||||||||| || ||||||  ||||| |||| |||||||||||| |||||||||||||| ||||    
T  13866943 atgtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaata 13867015  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2964814 - 2964741
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||| |||||||||| |||| |  ||||| |||| |||||||||||||| ||||||||| || |||||    
T  2964814 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 2964741  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28803535 - 28803462
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||||||||| |||| ||||||  ||||| |||| || ||| ||||||| |||||||||||| |||||    
T  28803535 atgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataa 28803462  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12140597 - 12140661
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataag 65  Q
    |||| |||||||||||||||| ||||||  |||| || ||  ||||||||||| |||||||||||    
T  12140597 atgtcataagttgttttcataagttctctcaaactatttcgtaagtgtttatgtcagtagataag 12140661  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40145517 - 40145581
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataag 65  Q
    ||||||||||||||||  ||| ||||||  |||||| |||  ||||||||||| |||||||||||    
T  40145517 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 40145581  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 34429689 - 34429645
Alignment:
Q  31 aaacaatctctcaagtgtttatgccagtagataagctcgaataaa 75  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  34429689 aaacaatatctcaagtgtttatgctagtagataagctcaaataaa 34429645  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2455875 - 2455948
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||||||||| |||| | |||   |||||||||| |||||| ||||||| |||||||||||| |||||    
T  2455875 atgtcataagttgtttccataagctcttctaaacaatctcgcaagtgcttatgccggtagataagctcaaataa 2455948  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32577991 - 32577931
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtaga 61  Q
    |||| |||||||||||||||| | ||||  ||||||| || ||||| ||||||||||||||    
T  32577991 atgtcataagttgttttcataagctctctcaaacaatgtcccaagtatttatgccagtaga 32577931  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 10771863 - 10771820
Alignment:
Q  31 aaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||||||||| |||||| |||||||||||||||||||| |||||    
T  10771863 aaacaatctcacaagtgcttatgccagtagataagctcaaataa 10771820  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2568723 - 2568796
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||| ||||| |||||||||| |||||   ||||| ||||||||||| |||  ||||||||||||||| |||||    
T  2568723 atgtcataagctgttttcataagttcttctaaacagtctctcaagtgcttacaccagtagataagctcaaataa 2568796  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 4273377 - 4273316
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagct 67  Q
    ||||| ||||| |||||||||||  |||||||||| ||| ||||||||||| |||| |||||    
T  4273377 ataagctgtttccataggttctctcaaacaatctcacaaatgtttatgccaatagacaagct 4273316  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12460006 - 12459941
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagc 66  Q
    |||| |||||||||||||||||||||||  ||||| |||| || ||| ||||| ||| ||||||||    
T  12460006 atgtcataagttgttttcataggttctcccaaacagtctcacaggtgcttatgtcagcagataagc 12459941  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 34117512 - 34117480
Alignment:
Q  42 caagtgtttatgccagtagataagctcgaataa 74  Q
    ||||||||||||||||||||||||||| |||||    
T  34117512 caagtgtttatgccagtagataagctccaataa 34117480  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 4034017 - 4033962
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtaga 61  Q
    ||||||| |||||||| | ||||  |||||||||| ||||||||||||||||||||    
T  4034017 ataagttattttcataagctctctcaaacaatctcacaagtgtttatgccagtaga 4033962  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 35017677 - 35017720
Alignment:
Q  31 aaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||    
T  35017677 aaacaatctcacaagtgtttatgccaatagataagctcaaataa 35017720  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 36070250 - 36070309
Alignment:
Q  5 tataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataa 64  Q
    ||||||||||||||||| ||||||  ||||| |||| |||||| ||||||||| ||||||    
T  36070250 tataagttgttttcataagttctcctaaacagtctcacaagtgcttatgccagaagataa 36070309  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 31517737 - 31517672
Alignment:
Q  9 agttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    ||||||||| ||| ||||||  ||||| |||| |||||| ||||||||||| |||||||| |||||    
T  31517737 agttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataa 31517672  T

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Target: chr3 (Bit Score: 30; Significance: 0.00000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8797752 - 8797816
Alignment:
Q  1 atgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagc 66  Q
    |||||||| | |||||||||||||||||  ||||| | || ||||| |||||||||||||||||||    
T  8797752 atgttatacgatgttttcataggttctcc-aaacagtatcacaagtatttatgccagtagataagc 8797816  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 50211801 - 50211866
Alignment:
Q  2 tgttataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagct 67  Q
    |||||||||||||||||||| ||||||  ||||| |||  |||||| |||||  ||||||||||||    
T  50211801 tgttataagttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagct 50211866  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 41644443 - 41644383
Alignment:
Q  8 aagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctc 68  Q
    |||||||||| ||| ||||||  ||||| | ||||||||| |||||| |||||||||||||    
T  41644443 aagttgtttttataagttctcctaaacagtgtctcaagtgcttatgctagtagataagctc 41644383  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 44014798 - 44014730
Alignment:
Q  6 ataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 74  Q
    ||||| |||||||||| ||| ||  ||||| |||| ||||||||||||| ||||||||| ||| |||||    
T  44014798 ataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataa 44014730  T

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