View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9022_high_3 (Length: 523)

Name: NF9022_high_3
Description: NF9022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9022_high_3
NF9022_high_3
[»] chr3 (51 HSPs)
chr3 (330-523)||(33154903-33155096)
chr3 (447-523)||(1079547-1079623)
chr3 (447-523)||(21186021-21186097)
chr3 (447-523)||(6956274-6956350)
chr3 (447-515)||(13948814-13948882)
chr3 (447-523)||(43608808-43608884)
chr3 (447-511)||(47856425-47856489)
chr3 (24-79)||(33155254-33155309)
chr3 (399-514)||(33156272-33156387)
chr3 (414-523)||(2796205-2796314)
chr3 (447-523)||(1078563-1078638)
chr3 (399-523)||(25107239-25107363)
chr3 (429-493)||(26718755-26718819)
chr3 (447-523)||(32431518-32431594)
chr3 (447-511)||(47857571-47857635)
chr3 (447-511)||(53756782-53756846)
chr3 (447-511)||(19741218-19741282)
chr3 (407-511)||(33689665-33689769)
chr3 (447-511)||(42343057-42343121)
chr3 (447-523)||(43384309-43384385)
chr3 (447-523)||(43998171-43998247)
chr3 (447-511)||(55052574-55052638)
chr3 (447-514)||(3469235-3469302)
chr3 (447-514)||(11910734-11910801)
chr3 (420-523)||(23276282-23276385)
chr3 (447-514)||(32306459-32306526)
chr3 (447-514)||(32306748-32306815)
chr3 (408-523)||(51994173-51994288)
chr3 (447-514)||(52032173-52032240)
chr3 (409-511)||(4323490-4323592)
chr3 (142-176)||(33155157-33155191)
chr3 (414-523)||(23458272-23458381)
chr3 (414-511)||(46474853-46474950)
chr3 (406-459)||(54896202-54896255)
chr3 (447-511)||(9294284-9294348)
chr3 (399-523)||(25108373-25108497)
chr3 (330-390)||(35712211-35712271)
chr3 (447-511)||(42342829-42342893)
chr3 (447-514)||(3469524-3469591)
chr3 (447-514)||(35643886-35643953)
chr3 (447-514)||(37778597-37778664)
chr3 (447-514)||(47551528-47551595)
chr3 (447-514)||(52032463-52032530)
chr3 (447-513)||(10307699-10307765)
chr3 (447-493)||(42854491-42854537)
chr3 (433-514)||(30381056-30381137)
chr3 (423-495)||(4322645-4322717)
chr3 (447-511)||(9368627-9368691)
chr3 (414-514)||(10770753-10770853)
chr3 (447-523)||(19740949-19741025)
chr3 (447-495)||(41422026-41422074)
[»] chr1 (50 HSPs)
chr1 (330-523)||(44522173-44522365)
chr1 (142-261)||(44522435-44522553)
chr1 (17-79)||(44522617-44522679)
chr1 (407-511)||(34464735-34464839)
chr1 (399-511)||(34850343-34850455)
chr1 (447-511)||(34464487-34464551)
chr1 (330-390)||(26234314-26234374)
chr1 (447-511)||(32133249-32133313)
chr1 (407-511)||(6367600-6367704)
chr1 (447-515)||(12905983-12906051)
chr1 (447-511)||(14879009-14879073)
chr1 (447-515)||(31058381-31058449)
chr1 (447-523)||(35038481-35038557)
chr1 (447-514)||(32132339-32132406)
chr1 (400-511)||(34849049-34849160)
chr1 (447-514)||(40714479-40714546)
chr1 (402-523)||(31197091-31197207)
chr1 (414-514)||(10303958-10304058)
chr1 (399-511)||(13300182-13300294)
chr1 (447-511)||(13914393-13914457)
chr1 (407-511)||(17662136-17662240)
chr1 (406-514)||(22103644-22103752)
chr1 (447-511)||(46163068-46163132)
chr1 (447-515)||(49955381-49955449)
chr1 (447-514)||(17189175-17189242)
chr1 (447-514)||(35040938-35041005)
chr1 (447-514)||(40714767-40714834)
chr1 (447-514)||(49955671-49955738)
chr1 (414-523)||(24009834-24009943)
chr1 (414-511)||(25647922-25648019)
chr1 (414-511)||(26024461-26024558)
chr1 (423-511)||(17691257-17691345)
chr1 (447-511)||(19017955-19018019)
chr1 (407-511)||(40210656-40210760)
chr1 (447-523)||(40772533-40772609)
chr1 (447-511)||(47999418-47999482)
chr1 (447-514)||(17188989-17189056)
chr1 (447-514)||(20760829-20760896)
chr1 (448-511)||(23209654-23209717)
chr1 (447-514)||(28325128-28325194)
chr1 (399-514)||(44523414-44523529)
chr1 (447-504)||(1103506-1103563)
chr1 (414-511)||(42248511-42248608)
chr1 (407-511)||(4960578-4960682)
chr1 (407-511)||(30711365-30711469)
chr1 (414-466)||(32928107-32928159)
chr1 (447-511)||(36694574-36694638)
chr1 (447-511)||(36710675-36710739)
chr1 (435-511)||(40439503-40439578)
chr1 (447-511)||(41098771-41098835)
[»] chr5 (35 HSPs)
chr5 (330-514)||(40148933-40149117)
chr5 (414-523)||(40150107-40150216)
chr5 (422-514)||(24141487-24141579)
chr5 (422-523)||(5835649-5835750)
chr5 (414-511)||(38475292-38475389)
chr5 (414-511)||(28771131-28771228)
chr5 (414-511)||(35512186-35512283)
chr5 (407-511)||(5993927-5994031)
chr5 (447-511)||(13362554-13362618)
chr5 (407-511)||(32242280-32242384)
chr5 (447-514)||(8875484-8875551)
chr5 (414-517)||(14849000-14849103)
chr5 (447-514)||(17544372-17544439)
chr5 (414-511)||(3529135-3529232)
chr5 (414-511)||(27587186-27587283)
chr5 (409-514)||(42063289-42063394)
chr5 (447-511)||(11761787-11761851)
chr5 (447-511)||(16083015-16083079)
chr5 (447-511)||(16157181-16157245)
chr5 (407-511)||(20840571-20840675)
chr5 (447-511)||(21287981-21288045)
chr5 (447-511)||(24547451-24547515)
chr5 (447-511)||(39453338-39453402)
chr5 (447-494)||(11047492-11047539)
chr5 (447-514)||(22298577-22298644)
chr5 (447-514)||(33871374-33871441)
chr5 (401-523)||(30096822-30096944)
chr5 (447-511)||(6150746-6150810)
chr5 (447-511)||(13962902-13962966)
chr5 (448-511)||(18247124-18247185)
chr5 (447-511)||(19892634-19892698)
chr5 (447-507)||(29646688-29646748)
chr5 (447-523)||(35920254-35920330)
chr5 (447-523)||(39453625-39453701)
chr5 (447-523)||(42067850-42067926)
[»] chr2 (42 HSPs)
chr2 (327-523)||(3556215-3556411)
chr2 (399-514)||(43741954-43742069)
chr2 (447-523)||(3653406-3653481)
chr2 (142-261)||(3555998-3556117)
chr2 (447-523)||(6589685-6589761)
chr2 (447-523)||(28230065-28230141)
chr2 (447-517)||(3652243-3652313)
chr2 (447-523)||(202682-202758)
chr2 (447-507)||(39936573-39936633)
chr2 (24-79)||(3555880-3555935)
chr2 (449-523)||(28228696-28228770)
chr2 (333-387)||(3653271-3653325)
chr2 (17-79)||(36859441-36859503)
chr2 (447-511)||(25231174-25231238)
chr2 (442-514)||(25892429-25892501)
chr2 (447-514)||(41587270-41587336)
chr2 (442-514)||(6573082-6573153)
chr2 (442-514)||(6573578-6573650)
chr2 (407-511)||(10712761-10712865)
chr2 (407-511)||(15848126-15848230)
chr2 (407-511)||(36382199-36382303)
chr2 (447-511)||(36479756-36479820)
chr2 (447-511)||(39935493-39935557)
chr2 (447-514)||(8710792-8710859)
chr2 (447-514)||(15604374-15604441)
chr2 (447-514)||(28226068-28226135)
chr2 (414-523)||(16099081-16099190)
chr2 (414-511)||(39498348-39498445)
chr2 (447-511)||(2318196-2318260)
chr2 (399-459)||(11349483-11349543)
chr2 (407-511)||(44714047-44714151)
chr2 (447-523)||(45556138-45556214)
chr2 (447-514)||(15604663-15604730)
chr2 (145-201)||(36859345-36859398)
chr2 (409-511)||(44045290-44045392)
chr2 (401-514)||(6577557-6577670)
chr2 (414-511)||(6657916-6658013)
chr2 (414-511)||(11163316-11163413)
chr2 (420-517)||(17266430-17266527)
chr2 (399-511)||(21370480-21370592)
chr2 (407-523)||(37895633-37895749)
chr2 (447-523)||(39498605-39498681)
[»] chr4 (66 HSPs)
chr4 (142-261)||(16606582-16606700)
chr4 (390-512)||(29320066-29320190)
chr4 (24-79)||(16606479-16606534)
chr4 (397-523)||(29321181-29321307)
chr4 (447-514)||(11446305-11446372)
chr4 (447-523)||(30642472-30642548)
chr4 (447-523)||(32063662-32063738)
chr4 (447-523)||(39667100-39667176)
chr4 (407-514)||(41582482-41582589)
chr4 (447-514)||(54858884-54858951)
chr4 (330-511)||(55867323-55867504)
chr4 (414-511)||(23613347-23613444)
chr4 (397-478)||(55866180-55866261)
chr4 (447-523)||(8438307-8438382)
chr4 (447-515)||(50503859-50503927)
chr4 (414-523)||(5368973-5369082)
chr4 (336-385)||(54713835-54713884)
chr4 (447-511)||(7451872-7451936)
chr4 (447-511)||(8439550-8439614)
chr4 (447-511)||(11448055-11448119)
chr4 (447-515)||(27068944-27069012)
chr4 (407-511)||(34765666-34765770)
chr4 (447-511)||(37248274-37248338)
chr4 (447-511)||(54087021-54087085)
chr4 (403-495)||(56014779-56014871)
chr4 (447-514)||(3032617-3032684)
chr4 (447-514)||(5818099-5818166)
chr4 (447-514)||(10408213-10408280)
chr4 (447-514)||(39701233-39701300)
chr4 (403-514)||(56015929-56016040)
chr4 (409-511)||(50750925-50751027)
chr4 (447-512)||(27891621-27891686)
chr4 (447-523)||(30641546-30641620)
chr4 (414-511)||(36009106-36009203)
chr4 (447-512)||(40316989-40317054)
chr4 (447-512)||(40327063-40327128)
chr4 (414-511)||(44967331-44967428)
chr4 (447-511)||(18831387-18831451)
chr4 (447-511)||(24711149-24711213)
chr4 (447-523)||(32062615-32062691)
chr4 (447-511)||(51692591-51692655)
chr4 (447-514)||(10407924-10407991)
chr4 (447-514)||(11523984-11524051)
chr4 (399-514)||(16605637-16605752)
chr4 (447-514)||(27069234-27069301)
chr4 (447-514)||(45463108-45463175)
chr4 (447-514)||(50504149-50504216)
chr4 (447-514)||(54858595-54858662)
chr4 (447-513)||(40387503-40387569)
chr4 (447-512)||(4982763-4982828)
chr4 (414-511)||(43155789-43155886)
chr4 (414-511)||(49879469-49879566)
chr4 (462-523)||(52909594-52909655)
chr4 (407-511)||(14801774-14801878)
chr4 (447-511)||(17356248-17356312)
chr4 (407-511)||(24349712-24349816)
chr4 (447-511)||(24411396-24411460)
chr4 (447-511)||(24711406-24711470)
chr4 (447-511)||(35508566-35508630)
chr4 (447-511)||(39539244-39539308)
chr4 (447-523)||(41583557-41583633)
chr4 (447-511)||(50418706-50418770)
chr4 (447-511)||(50418963-50419027)
chr4 (423-495)||(50751800-50751872)
chr4 (407-511)||(53701850-53701954)
chr4 (471-511)||(54435447-54435487)
[»] chr8 (49 HSPs)
chr8 (397-514)||(9337061-9337178)
chr8 (424-523)||(10749813-10749910)
chr8 (447-523)||(2535876-2535952)
chr8 (447-517)||(22915684-22915754)
chr8 (407-523)||(16388812-16388928)
chr8 (447-514)||(25124598-25124665)
chr8 (447-514)||(39474581-39474648)
chr8 (447-515)||(234064-234132)
chr8 (447-515)||(710475-710543)
chr8 (447-515)||(747687-747755)
chr8 (447-515)||(871582-871650)
chr8 (447-511)||(4405986-4406050)
chr8 (447-511)||(8316914-8316978)
chr8 (447-523)||(8746350-8746426)
chr8 (447-523)||(13186086-13186162)
chr8 (447-511)||(23698570-23698634)
chr8 (407-511)||(36928514-36928618)
chr8 (447-511)||(40318290-40318354)
chr8 (447-523)||(43181478-43181554)
chr8 (447-514)||(7983463-7983530)
chr8 (447-514)||(10445659-10445726)
chr8 (447-514)||(15230255-15230322)
chr8 (447-514)||(23505087-23505154)
chr8 (420-511)||(34060527-34060618)
chr8 (447-514)||(44664543-44664610)
chr8 (469-523)||(27500424-27500478)
chr8 (414-523)||(2534721-2534830)
chr8 (409-514)||(13084775-13084880)
chr8 (414-511)||(23663807-23663904)
chr8 (447-523)||(11761866-11761942)
chr8 (447-523)||(11763002-11763078)
chr8 (447-511)||(12273179-12273243)
chr8 (448-516)||(22915422-22915490)
chr8 (422-466)||(28339260-28339304)
chr8 (407-511)||(31608799-31608903)
chr8 (447-511)||(34061654-34061718)
chr8 (447-511)||(39071714-39071778)
chr8 (447-514)||(8998013-8998080)
chr8 (447-514)||(15229966-15230033)
chr8 (448-499)||(21433018-21433069)
chr8 (447-514)||(35634423-35634490)
chr8 (447-514)||(37542259-37542326)
chr8 (449-523)||(4994985-4995058)
chr8 (420-493)||(8747563-8747636)
chr8 (447-520)||(31873225-31873298)
chr8 (438-511)||(42803535-42803608)
chr8 (447-511)||(8316691-8316755)
chr8 (399-511)||(20385606-20385718)
chr8 (399-459)||(30459461-30459521)
[»] chr6 (32 HSPs)
chr6 (402-511)||(26463217-26463326)
chr6 (399-523)||(28498303-28498427)
chr6 (402-511)||(15116513-15116622)
chr6 (399-523)||(29810714-29810838)
chr6 (399-514)||(13378560-13378675)
chr6 (399-511)||(8090205-8090317)
chr6 (434-523)||(24210557-24210646)
chr6 (422-511)||(12408472-12408561)
chr6 (447-516)||(15115372-15115441)
chr6 (414-523)||(17734456-17734565)
chr6 (414-511)||(30803899-30803996)
chr6 (399-523)||(12407534-12407658)
chr6 (447-523)||(33517560-33517636)
chr6 (422-511)||(8089481-8089570)
chr6 (414-523)||(26464492-26464601)
chr6 (407-511)||(12080674-12080778)
chr6 (447-514)||(7905278-7905345)
chr6 (407-510)||(21627999-21628102)
chr6 (414-511)||(30337487-30337584)
chr6 (447-523)||(15913872-15913948)
chr6 (447-523)||(21627739-21627815)
chr6 (407-511)||(30725797-30725901)
chr6 (447-511)||(33647001-33647065)
chr6 (447-514)||(22502809-22502876)
chr6 (447-514)||(22503098-22503165)
chr6 (447-514)||(31407202-31407269)
chr6 (447-512)||(141066-141131)
chr6 (447-512)||(149087-149152)
chr6 (447-499)||(3059307-3059359)
chr6 (407-511)||(11434840-11434944)
chr6 (447-495)||(21836085-21836133)
chr6 (447-523)||(30337744-30337820)
[»] chr7 (48 HSPs)
chr7 (422-523)||(18855955-18856056)
chr7 (399-511)||(5457185-5457297)
chr7 (399-523)||(30127467-30127590)
chr7 (409-523)||(17886778-17886892)
chr7 (420-523)||(20425504-20425607)
chr7 (420-523)||(22828117-22828220)
chr7 (447-511)||(23181320-23181384)
chr7 (447-511)||(28469334-28469398)
chr7 (447-523)||(32687423-32687499)
chr7 (407-507)||(45010640-45010740)
chr7 (399-466)||(20567278-20567344)
chr7 (447-514)||(23058753-23058820)
chr7 (447-514)||(43266301-43266368)
chr7 (330-514)||(43124361-43124545)
chr7 (414-511)||(19204527-19204624)
chr7 (344-393)||(28248251-28248300)
chr7 (447-516)||(46205633-46205702)
chr7 (447-511)||(6571051-6571115)
chr7 (447-511)||(10935832-10935896)
chr7 (407-511)||(42731457-42731561)
chr7 (447-514)||(32068131-32068198)
chr7 (447-514)||(32068420-32068487)
chr7 (399-512)||(21724407-21724523)
chr7 (421-511)||(42362488-42362578)
chr7 (414-511)||(17102058-17102155)
chr7 (414-523)||(22871570-22871679)
chr7 (414-511)||(27991777-27991874)
chr7 (450-511)||(32299034-32299095)
chr7 (447-511)||(6253509-6253573)
chr7 (407-511)||(13386033-13386137)
chr7 (399-511)||(18670141-18670253)
chr7 (399-511)||(20426608-20426720)
chr7 (447-523)||(25628802-25628878)
chr7 (399-511)||(30128625-30128737)
chr7 (447-523)||(32688544-32688620)
chr7 (399-511)||(43123213-43123325)
chr7 (447-514)||(25628513-25628580)
chr7 (447-514)||(27138265-27138332)
chr7 (447-514)||(28890614-28890681)
chr7 (447-514)||(42618235-42618302)
chr7 (447-514)||(43266590-43266657)
chr7 (461-523)||(6764206-6764268)
chr7 (454-511)||(42363719-42363775)
chr7 (434-495)||(48789116-48789177)
chr7 (450-514)||(10600276-10600340)
chr7 (447-511)||(16803971-16804035)
chr7 (447-495)||(22081883-22081931)
chr7 (447-511)||(45010930-45010994)
[»] scaffold0008 (1 HSPs)
scaffold0008 (399-514)||(239829-239944)
[»] scaffold0771 (1 HSPs)
scaffold0771 (447-515)||(954-1022)
[»] scaffold0328 (2 HSPs)
scaffold0328 (447-514)||(11464-11531)
scaffold0328 (447-491)||(11198-11242)
[»] scaffold0031 (1 HSPs)
scaffold0031 (407-523)||(68991-69107)
[»] scaffold0388 (1 HSPs)
scaffold0388 (447-514)||(12563-12630)
[»] scaffold0182 (2 HSPs)
scaffold0182 (399-497)||(31676-31774)
scaffold0182 (399-512)||(33045-33161)
[»] scaffold0007 (1 HSPs)
scaffold0007 (414-508)||(1810-1904)
[»] scaffold0775 (1 HSPs)
scaffold0775 (447-523)||(6304-6380)
[»] scaffold0599 (1 HSPs)
scaffold0599 (447-514)||(2428-2495)
[»] scaffold0042 (1 HSPs)
scaffold0042 (447-514)||(12104-12171)
[»] scaffold0006 (2 HSPs)
scaffold0006 (447-514)||(222113-222180)
scaffold0006 (447-495)||(221844-221892)
[»] scaffold0128 (1 HSPs)
scaffold0128 (447-523)||(19883-19959)
[»] scaffold0005 (1 HSPs)
scaffold0005 (407-511)||(37849-37953)


Alignment Details
Target: chr3 (Bit Score: 134; Significance: 2e-69; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 330 - 523
Target Start/End: Complemental strand, 33155096 - 33154903
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcacgtcattattaagctaatcagtgacttggcactgattaactg 429  Q
    ||||| |||||||||||| |||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33155096 gggtactttggtcttttcgcatttgtctgatgaatccagggttatttttgtccattcacgtcattattaagctaatcagtgacttggcactaattaactg 33154997  T
Q  430 ggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||| |||||||||||||| || |||||    
T  33154996 ggttgagggaccaattcttaaatgattaaactttacaaggataatttgtcaggattaacgattacagggaccaatttttaaatgacccctaatt 33154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 1079547 - 1079623
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||| || |||||    
T  1079547 ttaaaagattaaactttgcaaggctaatttgccaggattaacgattacagggaccaatttttaaatgacccctaatt 1079623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 21186021 - 21186097
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||| | |||||||||||||| || |||||    
T  21186021 ttaaatgattaaggtttgcaagggtaatttgccaggattaacgattacatgtaccaatttttaaatgacccctaatt 21186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 6956350 - 6956274
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||| || |||||||||||||||||||| |||||||||||| | |||  |||||||||||||||| |||||    
T  6956350 ttaaatgatttaagtttgcaagggtaatttgccaggattaacgattatagggactaatttttaaatgatccctaatt 6956274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 515
Target Start/End: Complemental strand, 13948882 - 13948814
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  13948882 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggactaatttttaaatgat 13948814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 43608808 - 43608884
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||||||||||| |||||| | | ||||||||||||||  || ||||||||||||||||| |||||    
T  43608808 ttaaatgattaaactttgcaaggttaatttacgaggattaacgattacagagaccaatttttaaatgatccctaatt 43608884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 47856489 - 47856425
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||| ||| |||||||||||    
T  47856489 ttaaatgattaaactttgcaagagtaatttgtcaggattaacgattacaaggaccaatttttaaa 47856425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 33155309 - 33155254
Alignment:
Q  24 tgttgcatctgtgattgaaatacaccttgatgtttttaggggtttgttcaaattac 79  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  33155309 tgttgcatctgtgtttgaaatacaccttgacgtctttaggggtttgttcaaattac 33155254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 399 - 514
Target Start/End: Original strand, 33156272 - 33156387
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    ||||||| |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  || |||||||| |||||||||||||||||||||  |    
T  33156272 agctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaaacaatgaaagggtaaattgccaagattaacgattacaatg 33156371  T
Q  499 atcaatttttaaatga 514  Q
    |  |||||||||||||    
T  33156372 actaatttttaaatga 33156387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 2796314 - 2796205
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||||    
T  2796314 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaatg 2796215  T
Q  514 atccataatt 523  Q
    | || |||||    
T  2796214 acccctaatt 2796205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 1078638 - 1078563
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||||| ||||| |||||| ||| |||||||||||||| ||| |||||||||||||| || |||||    
T  1078638 ttaaatgattaaactttacaaggttaatttacca-gattaacgattacagggaccaatttttaaatgacccctaatt 1078563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 25107363 - 25107239
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    ||||||||| |||| ||||| |||||||||| | |||||||  || | ||||||||||||  |||||| ||| ||||||||| ||||| |||||| |  |    
T  25107363 agctaatcactgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaacatttgcaggggcaatttgccaggattagcgattagagag 25107264  T
Q  499 atcaatttttaaatgatccataatt 523  Q
    | |||||||||||||| || |||||    
T  25107263 accaatttttaaatgacccctaatt 25107239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 429 - 493
Target Start/End: Original strand, 26718755 - 26718819
Alignment:
Q  429 gggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgatta 493  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||  ||||| |||||    
T  26718755 gggttgagggaccaatttttaaatgattaaactttacaagggtaatttgccagaattaatgatta 26718819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 32431518 - 32431594
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||| ||||||||||||||| ||||||| || ||||||||||| || ||| |||||||||||||| || |||||    
T  32431518 ttaaatggttaaactttgcaaggctaatttgtcaggattaacgattgcagggaccaatttttaaatgacccctaatt 32431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 47857571 - 47857635
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||||||||||| |||||| |||  |||||||||||||  ||||||||||||||    
T  47857571 ttaaatgattaaactttgcaaggataatttaccagaattaacgattacaaagatcaatttttaaa 47857635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 53756846 - 53756782
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| || | |||||||||||||||||| |||||||||||||    
T  53756846 ttaaatgattaaacaatgcaagggtaaattactaagattaacgattacatgaatcaatttttaaa 53756782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 19741218 - 19741282
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  | ||||||||| |||||||||||| |||||||| ||| |||||||||||    
T  19741218 ttaaatgattaaacaatacaagggtaaattgccaagattagcgattacagggaccaatttttaaa 19741282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 33689665 - 33689769
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | |||||||||||||   ||||||||||| |||||| ||||| |||||||||| | ||||||    
T  33689665 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaagggtaaattgccaggattagcgattacatgaaccaattt 33689764  T
Q  507 ttaaa 511  Q
    |||||    
T  33689765 ttaaa 33689769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 42343057 - 42343121
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||| | |||||||  |||||||| ||||||| ||| ||||||||||||||||||||    
T  42343057 ttaaatgattaatcattgcaagactaatttgcaaagattagcgaatacatggatcaatttttaaa 42343121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 43384385 - 43384309
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| ||| ||||||||||| ||||| |||||    
T  43384385 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttttaaaggatccgtaatt 43384309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 43998247 - 43998171
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  ||||||||||| ||||||  ||||||||||||| |||  |||||||||||||  |||||||    
T  43998247 ttaaatgattaaacaatgcaagggtaaattgccagaattaacgattacaaggactaatttttaaatgacacataatt 43998171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 55052574 - 55052638
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||  ||||| |||||| |||||||||||||||||| |||||||||||    
T  55052574 ttaaatgattaaacaatgcagaggtaaattgccatgattaacgattacatggaccaatttttaaa 55052638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 3469302 - 3469235
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| |||||  |||||||||||  |||||||||||||    
T  3469302 ttaaatgattaaacaatgcaagggtaaattgccaggattagtgattacatggactaatttttaaatga 3469235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 11910801 - 11910734
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||| | ||||| |||||||| |||| |||||||||||||    
T  11910801 ttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacagggattaatttttaaatga 11910734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 523
Target Start/End: Original strand, 23276282 - 23276385
Alignment:
Q  420 tgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccat 519  Q
    |||||||||| | |||||||  || | ||||||||||||  |||| | ||||||||||||  ||||| |||||||| ||| |||||||||||||| || |    
T  23276282 tgattaactgtgatgagggacaaaattttaaatgattaacgtttgtaggggtaatttgccgggattagcgattacagggaccaatttttaaatgacccct 23276381  T
Q  520 aatt 523  Q
    ||||    
T  23276382 aatt 23276385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 32306526 - 32306459
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| |||||||| |||||||||| |  |||||||||||||    
T  32306526 ttaaatgattaaacaatgcaagggtaaattgtcaagattagcgattacatgaactaatttttaaatga 32306459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 32306748 - 32306815
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||| ||  |||||||||||||    
T  32306748 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacattgactaatttttaaatga 32306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 523
Target Start/End: Original strand, 51994173 - 51994288
Alignment:
Q  408 gtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttt 507  Q
    ||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| ||||||  |||| |||||||| ||| |||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccagaattagcgattacaaggaccaatttt 51994272  T
Q  508 taaatgatccataatt 523  Q
    |||| ||||| |||||    
T  51994273 taaacgatccctaatt 51994288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 52032240 - 52032173
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||| | ||||| |||||||| |||| |||||||||||||    
T  52032240 ttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacaaggattaatttttaaatga 52032173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 511
Target Start/End: Original strand, 4323490 - 4323592
Alignment:
Q  409 tgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    |||| ||||| | ||||| |||||| || ||  |||| ||||||||||||||  ||||||| |||||||||| ||||| |||||||| |||  |||||||    
T  4323490 tgacgtggcagtcattaagtgggttcagtgacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcgattacagggacgaattttt 4323589  T
Q  509 aaa 511  Q
    |||    
T  4323590 aaa 4323592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 33155191 - 33155157
Alignment:
Q  142 ggtacttggagttgcttcttaatgtgtggtggcgt 176  Q
    |||||||||||||||||||||||||||||||||||    
T  33155191 ggtacttggagttgcttcttaatgtgtggtggcgt 33155157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 23458272 - 23458381
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||| | ||||| ||||||||  || ||||||||||| |    
T  23458272 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgattacagagaccaatttttaaacg 23458371  T
Q  514 atccataatt 523  Q
    | ||||||||    
T  23458372 acccataatt 23458381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 46474950 - 46474853
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||| ||||| |||||||||||| ||||||||  || |||||||||||    
T  46474950 tggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaatggtaaattgccaagattagcgattacagagaccaatttttaaa 46474853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 459
Target Start/End: Original strand, 54896202 - 54896255
Alignment:
Q  406 cagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaa 459  Q
    ||||||| ||||||| ||||||||||| |||||||||||| |||| ||||||||    
T  54896202 cagtgacatggcactaattaactgggtagagggatcaatttttaagtgattaaa 54896255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 9294284 - 9294348
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||| | ||| |||||||||||    
T  9294284 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattatagggaccaatttttaaa 9294348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 25108373 - 25108497
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| |||||||||| | ||| |||  || | ||||||||||||  |||||| ||  | ||||||| ||||| | |||||| ||    
T  25108373 agctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaacgtttgcagggacagtttgccaggattagcaattacaggg 25108472  T
Q  499 atcaatttttaaatgatccataatt 523  Q
    | ||| |||||||||| || |||||    
T  25108473 accaaattttaaatgacccctaatt 25108497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 35712271 - 35712211
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcacgt 390  Q
    |||||||||||||||||  ||||| | |||||||| || ||| ||||||||||||||||||    
T  35712271 gggtattttggtctttttgcatttatttgatgagttcaggggaatttttgtccattcacgt 35712211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 42342893 - 42342829
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| || || | |||||||||| |||||||||||    
T  42342893 ttaaatgattaaacaatgcaagggtaaattgccaggactagcaattacatggaccaatttttaaa 42342829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 3469524 - 3469591
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| | |  |||||||||||||    
T  3469524 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaggaactaatttttaaatga 3469591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 35643953 - 35643886
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  |||| |||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  35643953 ttaaatgattaaacaatgcacgggtaaattgccaggattagcgattacagggactaatttttaaatga 35643886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 37778597 - 37778664
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| | |||||| |||  |||||||||||||    
T  37778597 ttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaatttttaaatga 37778664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 47551595 - 47551528
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||||||  |||| |||||||| |||  |||||||||||||    
T  47551595 ttaaatgattaaacaatgcaagggtaaattgccagtattagcgattacagggactaatttttaaatga 47551528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 52032463 - 52032530
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||  |||||| ||||| |||||||| |||  |||||||||||||    
T  52032463 ttaaatgattaaacaatgcaagggtatattgccaggattagcgattacagggactaatttttaaatga 52032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 10307699 - 10307765
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  ||  ||||||||||||    
T  10307699 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagactaatttttaaatg 10307765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 493
Target Start/End: Complemental strand, 42854537 - 42854491
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgatta 493  Q
    ||||||||||||| ||||||| ||||||||||||| ||||| |||||    
T  42854537 ttaaatgattaaattttgcaaaggtaatttgccaacattaaagatta 42854491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 514
Target Start/End: Original strand, 30381056 - 30381137
Alignment:
Q  433 tgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||| ||||||||||||| ||||  |||| ||  |||||  ||||| || |||||||| || |||||||||||    
T  30381056 tgagggatcaatttttaaatgattaaattttggcagggcaaaatgccagaattaaagaatacatggaccattttttaaatga 30381137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 4322717 - 4322645
Alignment:
Q  423 ttaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    |||| |||||| |||||  |||| ||||||||||||||  ||||||| ||||||| || ||||| ||||||||    
T  4322717 ttaagtgggttcagggacgaatttttaaatgattaaacaatgcaaggttaatttgtcaggattagcgattaca 4322645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 9368627 - 9368691
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  || ||| ||||||||| | |||||| ||||||| ||| |||||||||||    
T  9368627 ttaaatgattaaacaatgtaagagtaatttgcaaggattaatgattacagggaccaatttttaaa 9368691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 514
Target Start/End: Original strand, 10770753 - 10770853
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||   |||||||| ||| |||||| ||||||| |||||| |||  ||||||||||||    
T  10770753 tggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagggacgaatttttaaatg 10770852  T
Q  514 a 514  Q
    |    
T  10770853 a 10770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 19741025 - 19740949
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||   |||||||| || ||||| | ||||| |||||||| ||| ||||||||||| ||||| |||||    
T  19741025 ttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaatttttaaacgatccctaatt 19740949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 41422074 - 41422026
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    ||||||||||||||  || |||||||| ||| |||||||||||||||||    
T  41422074 ttaaatgattaaacaatgtaagggtaaattgtcaagattaacgattaca 41422026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 1e-64; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 330 - 523
Target Start/End: Complemental strand, 44522365 - 44522173
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcacgtcattattaagctaatcagtgacttggcactgattaactg 429  Q
    ||||| |||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44522365 gggtactttggtcttt-cgcatttgtctgatgaatccaggggtatttttgtccattcacgtcattattaagctaatcagtgacttggcactgattaactg 44522267  T
Q  430 ggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||  || ||||||||||||||||||||||| ||||| |||||||| | |||||||||||||| ||  ||||||||||||||||| |||||    
T  44522266 ggttgaaagaccaattcttaaatgattaaactttacaaggataatttgctaggattaacgattacagggtccaatttttaaatgatccctaatt 44522173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 44522553 - 44522435
Alignment:
Q  142 ggtacttggagttgcttcttaatgtgtggtggcgtgggaaatggattccctgtgttcaacnnnnnnnnnnngacatttaaggaagtgggttgtacaacaa 241  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||           ||||||||||||||||||||||||| |||    
T  44522553 ggtacttgaagttgctttttaatgtgtggtggcgtgggaaatggattccatgtgttcaac-aaaaaaaaaagacatttaaggaagtgggttgtacagcaa 44522455  T
Q  242 acaaagatgaagaaatttct 261  Q
    ||||||||||||||||||||    
T  44522454 acaaagatgaagaaatttct 44522435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 44522679 - 44522617
Alignment:
Q  17 atgcttatgttgcatctgtgattgaaatacaccttgatgtttttaggggtttgttcaaattac 79  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44522679 atgcttgtgttgcatctgtgcttgaaatacaccttgatgtttttaggggtttgttcaaattac 44522617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 34464735 - 34464839
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||||    
T  34464735 agtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaacattgcaagggtaaattgccaagattagcgattacatggaccaattt 34464834  T
Q  507 ttaaa 511  Q
    |||||    
T  34464835 ttaaa 34464839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 34850343 - 34850455
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| ||||||| ||||  ||||||| || | ||||||||||||| |||||||||||||||||| | ||||| ||| |||| ||    
T  34850343 agctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacaggg 34850442  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  34850443 accaatttttaaa 34850455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 34464551 - 34464487
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  34464551 ttaaatgattaaacattgcaagggtaaattgccaagattagcgattacatggaccaatttttaaa 34464487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 26234374 - 26234314
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcacgt 390  Q
    |||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||    
T  26234374 gggtattttggtcttttctcatttgtcttatgagtccaacggtatttttgtccattcacgt 26234314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 32133249 - 32133313
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||||||||    
T  32133249 ttaaatgattaaactttgcgaggctaatttgccaagattaacgattacaaggacgaatttttaaa 32133313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 6367704 - 6367600
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| ||||||    
T  6367704 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaattt 6367605  T
Q  507 ttaaa 511  Q
    |||||    
T  6367604 ttaaa 6367600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 12905983 - 12906051
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||||||  ||||||||||||||    
T  12905983 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacatggactaatttttaaatgat 12906051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 14879073 - 14879009
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||||||||| |||||||||| | |||||||||||    
T  14879073 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatgaaccaatttttaaa 14879009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 31058381 - 31058449
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||||||||| ||  ||||||||||||||    
T  31058381 ttaaatgattaaacaatgcaagggtaaattgccaagattatcgattacattgactaatttttaaatgat 31058449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 35038557 - 35038481
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  | |||  ||||||||| | ||||||||||||||||||||||||||||||||| || |||||    
T  35038557 ttaaatgattaaacaatacaaaagtaatttgctaggattaacgattacatggatcaatttttaaatgacccttaatt 35038481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 32132406 - 32132339
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||| ||||||||||||| ||| ||||||||| | ||||||||||||||||||  |||||||||||||    
T  32132406 ttaattgattaaactttgtaagagtaatttgcaaggattaacgattacatggacgaatttttaaatga 32132339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 511
Target Start/End: Complemental strand, 34849160 - 34849049
Alignment:
Q  400 gctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgga 499  Q
    ||||||| ||||| ||||| |||||||  |||  ||||||  || | ||||||||||||| |||||||||||||||||| | ||||| ||| |||| |||    
T  34849160 gctaatcggtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacaggga 34849061  T
Q  500 tcaatttttaaa 511  Q
     |||||||||||    
T  34849060 ccaatttttaaa 34849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 40714546 - 40714479
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||||| |||  |||||||||||||    
T  40714546 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggactaatttttaaatga 40714479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 523
Target Start/End: Complemental strand, 31197207 - 31197091
Alignment:
Q  402 taatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatc 501  Q
    ||||||||||| ||||| ||||||||| || |||||||| || | |||||||||||     |||||||||||||| ||| ||||||||| ||||  ||      
T  31197207 taatcagtgacgtggcagtgattaactaggatgagggatgaaattttaaatgatta-----tgcaagggtaattttccaggattaacgaatacagagaca 31197113  T
Q  502 aatttttaaatgatccataatt 523  Q
    ||||||||||||| || |||||    
T  31197112 aatttttaaatgacccctaatt 31197091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 514
Target Start/End: Complemental strand, 10304058 - 10303958
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||| |||| ||||| || |||||| ||||||||| ||||| ||||| ||||||||||    
T  10304058 tggcagtgattaagtggggagagggacgaaattttaaatgattaaattttggaagggcaaattgccaggattaacgaatacatagatcattttttaaatg 10303959  T
Q  514 a 514  Q
    |    
T  10303958 a 10303958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 13300182 - 13300294
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||| |||| | ||||||   || ||| ||||||||| | |||||  || ||||  |    
T  13300182 agctaatcagtgacgtggcactgattaagtgggttgaaggatcaatttttaagttattaaagaatgtaagagtaatttgcaaggattagtgaatacagag 13300281  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  13300282 accaatttttaaa 13300294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 13914393 - 13914457
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  | ||||||||| |||||| ||||| |||||||||||| |||||||||||    
T  13914393 ttaaatgattaaacaatacaagggtaaattgccaggattagcgattacatggaccaatttttaaa 13914457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 17662136 - 17662240
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| |||||||||||| | | | ||||||    
T  17662136 agtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattaaaggaaccaattt 17662235  T
Q  507 ttaaa 511  Q
    |||||    
T  17662236 ttaaa 17662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 514
Target Start/End: Complemental strand, 22103752 - 22103644
Alignment:
Q  406 cagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatt 505  Q
    ||||||| ||||| | |||||||||| ||||||| ||||| |||| ||||| || |||| ||||| ||  ||||||||||||  | |||||||| || ||    
T  22103752 cagtgacgtggcagtcattaactgggctgagggaccaatttttaagtgattcaattttggaagggcaaaatgccaagattaaaaaatacatggaccattt 22103653  T
Q  506 tttaaatga 514  Q
    |||||||||    
T  22103652 tttaaatga 22103644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 46163132 - 46163068
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||||||| |||||||||||    
T  46163132 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggaccaatttttaaa 46163068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Complemental strand, 49955449 - 49955381
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  ||||||||||||||    
T  49955449 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgat 49955381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 17189175 - 17189242
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  17189175 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 17189242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 35040938 - 35041005
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| ||||||||||||  |||||||||||||    
T  35040938 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggactaatttttaaatga 35041005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 40714767 - 40714834
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||| ||||| |||||| ||||| ||||||||||||  |||||||||||||    
T  40714767 ttaaatgattaaacaatgcaaaggtaaattgccaggattagcgattacatggactaatttttaaatga 40714834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 49955671 - 49955738
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||||||||||||  ||  |||||||||||||    
T  49955671 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacaaagactaatttttaaatga 49955738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 24009834 - 24009943
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||  ||||||||  || ||||||||||| |    
T  24009834 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattggcgattacaatgaccaatttttaaacg 24009933  T
Q  514 atccataatt 523  Q
    |||| |||||    
T  24009934 atccctaatt 24009943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 25648019 - 25647922
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | |||||||||||||   |||| |||||| |||||| |||||||||||||| ||| |||||||||||    
T  25648019 tggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaa 25647922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 26024558 - 26024461
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  || |||||||||||    
T  26024558 tggcagtgattaagtggggagagggacgaacttttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaa 26024461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 17691345 - 17691257
Alignment:
Q  423 ttaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||| ||||||||||  || | ||||||||||||||  ||||||  |||||||| | ||||| |||||||| ||| |||||||||||    
T  17691345 ttaacttggttgagggacgaaattttaaatgattaaacaatgcaagactaatttgcaaggattagcgattacagggaccaatttttaaa 17691257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 19017955 - 19018019
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||   ||||||||||| |||||| ||||| ||| |||||||| |||||||||||    
T  19017955 ttaaatgattaaataatgcaagggtaaattgccaggattagcgaatacatggaccaatttttaaa 19018019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 40210656 - 40210760
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||||||  |||| ||||||||  || ||||||    
T  40210656 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacaaagaccaattt 40210755  T
Q  507 ttaaa 511  Q
    |||||    
T  40210756 ttaaa 40210760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 40772609 - 40772533
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  |||||| |||| ||| || ||||| |||||||| ||| ||||||||||| || ||||||||    
T  40772609 ttaaatgattaaacaatgcaagagtaaattgtcaggattagcgattacagggaccaatttttaaacgacccataatt 40772533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 47999418 - 47999482
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||   |||| |||||| |||||||||||| |||||||| ||| |||||||||||    
T  47999418 ttaaatgattaaataatgcaggggtaaattgccaagattagcgattacagggaccaatttttaaa 47999482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 17189056 - 17188989
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||||||||||||   ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  17189056 ttaaatgattaaataatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 17188989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 20760829 - 20760896
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  ||  |||||||||||||    
T  20760829 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagactaatttttaaatga 20760896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 511
Target Start/End: Original strand, 23209654 - 23209717
Alignment:
Q  448 taaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||| |||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  23209654 taaatgattgaacaatgcaagggtaaattgccaggattagcgattacaaggaccaatttttaaa 23209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 28325128 - 28325194
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||||||  |||||||||||||| ||  |||||||||||||    
T  28325128 ttaaatgattaaacaatgcaagggtaaattgccataattaacgattacat-gactaatttttaaatga 28325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 514
Target Start/End: Original strand, 44523414 - 44523529
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    ||||||| |||||| ||||| ||||||| ||    ||||||| || | ||||||||||||||  ||||||||||| |||||| ||||| |||||| |       
T  44523414 agctaattagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaaacaatgcaagggtaaattgccatgattagcgattatagat 44523513  T
Q  499 atcaatttttaaatga 514  Q
    || |||||||||||||    
T  44523514 attaatttttaaatga 44523529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 504
Target Start/End: Complemental strand, 1103563 - 1103506
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaat 504  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| ||||    
T  1103563 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaat 1103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 42248608 - 42248511
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| ||| ||||  || |||||||||||    
T  42248608 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccacgattagcgactacaaagaccaatttttaaa 42248511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 4960682 - 4960578
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||| | ||||| ||| ||||  || ||||||    
T  4960682 agtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatacaaagagcaattt 4960583  T
Q  507 ttaaa 511  Q
    |||||    
T  4960582 ttaaa 4960578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 30711469 - 30711365
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||| ||| |||| | ||||| |||||| |  |||||||||    
T  30711469 agtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaaacaatgcaaggataaattgctaggattagcgattatagagatcaattt 30711370  T
Q  507 ttaaa 511  Q
    |||||    
T  30711369 ttaaa 30711365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 32928107 - 32928159
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgca 466  Q
    ||||||||||||||| |||||| ||| ||| |||||||| |||||| ||||||    
T  32928107 tggcactgattaactaggttgatggaccaaatcttaaataattaaattttgca 32928159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 36694574 - 36694638
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || ||||| ||||||||  || |||||||||||    
T  36694574 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaa 36694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 36710675 - 36710739
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || ||||| ||||||||  || |||||||||||    
T  36710675 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaa 36710739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 40439503 - 40439578
Alignment:
Q  435 agggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||| ||||||||||||||||||  ||| || ||||| | ||||| ||| ||||| ||||||||||||||    
T  40439503 agggaccaatttttaaatgattaaactttgagaggttagtttgcaaggattagcgaatacat-gatcaatttttaaa 40439578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 41098835 - 41098771
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || ||||| ||||||||  || |||||||||||    
T  41098835 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaa 41098771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 4e-64; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 330 - 514
Target Start/End: Complemental strand, 40149117 - 40148933
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcacgtcattattaagctaatcagtgacttggcactgattaactg 429  Q
    |||||||||||||||||| ||||||||| ||||||||  |||||||||||||| || ||||||||||||||||||||||| || || |||||||||||||    
T  40149117 gggtattttggtcttttcgcatttgtctaatgagtccgggggtatttttgtcctttgacgtcattattaagctaatcagtcacgtgacactgattaactg 40149018  T
Q  430 ggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    || ||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  40149017 ggatgagggaccaattcttaaatgattaaactttgaaagggtaatttgctaggattaacgattacatggaccaatttttaaatga 40148933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 40150107 - 40150216
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||| | | |||||||||||||| ||| ||||||| |||||    
T  40150107 tggcagtgattaattaggttgagggaccaattcttaaatgattaaactttgaaagggtaattttctaggattaacgattacagggaccaattttaaaatg 40150206  T
Q  514 atccataatt 523  Q
    | || |||||    
T  40150207 acccctaatt 40150216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 422 - 514
Target Start/End: Complemental strand, 24141579 - 24141487
Alignment:
Q  422 attaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||| |||||  |||||| || | ||||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||    
T  24141579 attaaatgggtcaagggatgaaattttaaatgattaaactttgcaaggctaatttgccaggattaacgattacagggaccaatttttaaatga 24141487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 422 - 523
Target Start/End: Complemental strand, 5835750 - 5835649
Alignment:
Q  422 attaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataa 521  Q
    |||||||||| | || || ||| | |||||||||||||||||||||||||||||||| ||||||||||| |||| | | ||||||||||| ||||| |||    
T  5835750 attaactgggctcagagaccaaattttaaatgattaaactttgcaagggtaatttgcaaagattaacgaatacaagaaccaatttttaaacgatccctaa 5835651  T
Q  522 tt 523  Q
    ||    
T  5835650 tt 5835649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 38475292 - 38475389
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||| || |||||||||||||||||| |||||||||||    
T  38475292 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacatggaccaatttttaaa 38475389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 28771131 - 28771228
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  | || |||||| |||||||||||| |||||||||||| |||||||||||    
T  28771131 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaggggtaaattgccaagattagcgattacatggaccaatttttaaa 28771228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 35512283 - 35512186
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  35512283 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 35512186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 5994031 - 5993927
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||||||  |||| |||||||| ||| ||||||    
T  5994031 agtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagggaccaattt 5993932  T
Q  507 ttaaa 511  Q
    |||||    
T  5993931 ttaaa 5993927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 13362554 - 13362618
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  13362554 ttaaatgattaaacaatgcaagggtaaattgccatgattagcgattacaaggaccaatttttaaa 13362618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 32242384 - 32242280
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||||| |||| |||||| ||||| | |||||| ||||||||||    
T  32242384 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagagtaaattgccatgattagctattacagggatcaattt 32242285  T
Q  507 ttaaa 511  Q
    |||||    
T  32242284 ttaaa 32242280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 8875551 - 8875484
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||||| |||  |||||||||||||    
T  8875551 ttaaatgattaaacaatgcaagtgtaaattgccaggattaacgattacagggactaatttttaaatga 8875484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 414 - 517
Target Start/End: Original strand, 14849000 - 14849103
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| |||| ||||||| ||| | ||||||||||||| ||||  |||| ||  ||||| |||||| || |||||||| || ||||||||||    
T  14849000 tggcagtgattaagtggggtgagggaccaaattttaaatgattaaattttggtagggcaaaatgccacgattaaggaatacatggaccattttttaaatg 14849099  T
Q  514 atcc 517  Q
    ||||    
T  14849100 atcc 14849103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 17544372 - 17544439
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||||| | |  |||||||||||||    
T  17544372 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacaggaactaatttttaaatga 17544439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 3529135 - 3529232
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  || | |||||| |||||| |||||||||||||| ||| |||||||||||    
T  3529135 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaa 3529232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 27587283 - 27587186
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| |||||||||||    
T  27587283 tggcagtgattaaatggggagagggacgaaattttaaatgattaaacgatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 27587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 514
Target Start/End: Complemental strand, 42063394 - 42063289
Alignment:
Q  409 tgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    |||| ||||| |||||| ||| | |||||||  || | ||||||||||||  |||||| ||| ||||||||| ||||| ||||||||  || ||||||||    
T  42063394 tgacgtggcagtgattacctgtgatgagggacaaaattttaaatgattaacatttgcaggggcaatttgccaggattagcgattacagagaccaattttt 42063295  T
Q  509 aaatga 514  Q
    ||||||    
T  42063294 aaatga 42063289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 11761851 - 11761787
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| |||||||||||    
T  11761851 ttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 11761787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 16083079 - 16083015
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  ||||||||||    
T  16083079 ttaaatgattaaacaatgcaagggtaaattgccaggattatcgattacagggactaatttttaaa 16083015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 16157181 - 16157245
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || |||||||||||| | ||| |||||||||||    
T  16157181 ttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattatagggaccaatttttaaa 16157245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 20840675 - 20840571
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | |||||| |||||||  ||||||||||| |||| | |||||||||||||| | | ||||||    
T  20840675 agtgacgtggcagtgattaagtggggagagggacaaaattttaaatcattaaacaatgcaagggtaaattgctaggattaacgattacaggtaccaattt 20840576  T
Q  507 ttaaa 511  Q
    |||||    
T  20840575 ttaaa 20840571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 21287981 - 21288045
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  |||||||||   |||||| ||||| ||||||||||||| ||||||||||    
T  21287981 ttaaatgattaaacaatgcaagggtgtattgccatgattagcgattacatggattaatttttaaa 21288045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 24547451 - 24547515
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||| | ||| |||||||||||    
T  24547451 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattataaggaccaatttttaaa 24547515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 39453402 - 39453338
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  || |||||||||||    
T  39453402 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaa 39453338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 494
Target Start/End: Complemental strand, 11047539 - 11047492
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattac 494  Q
    ||||||||||||||  ||||||||||| |||||||||||| |||||||    
T  11047539 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattac 11047492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 22298644 - 22298577
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  || |||||||| |||||  ||||| ||||||||||||  |||||||||||||    
T  22298644 ttaaatgattaaacaatgtaagggtaaattgccccgattagcgattacatggactaatttttaaatga 22298577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 33871441 - 33871374
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||||||  |||| |||||||| |||  |||||||||||||    
T  33871441 ttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagggactaatttttaaatga 33871374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 523
Target Start/End: Original strand, 30096822 - 30096944
Alignment:
Q  401 ctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggat 500  Q
    |||||| ||||  ||||||||||||||| |||||||||| ||||| |||| |||||||  |||   ||||||| ||||||  ||||| |  |||| |||     
T  30096822 ctaatcggtgatgtggcactgattaactaggttgagggaccaatttttaagtgattaatttttaggagggtaaattgccagaattaatggatacagggac 30096921  T
Q  501 caatttttaaatgatccataatt 523  Q
    || ||||||||||| || |||||    
T  30096922 cattttttaaatgacccctaatt 30096944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 6150746 - 6150810
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||   |||||||| || ||||| ||||||||||| ||||||||  ||||||||||    
T  6150746 ttaaatgattaatgattgcaaggctagtttgcaaagattaacgaatacatggactaatttttaaa 6150810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 13962966 - 13962902
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| || ||| ||||| | |||||| ||| |||||||||||    
T  13962966 ttaaatgattaaacaatgcaagggtaaattaccaggattagcaattacagggaccaatttttaaa 13962902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 511
Target Start/End: Complemental strand, 18247185 - 18247124
Alignment:
Q  448 taaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||   ||||||||||| |||||||  ||| |||||||||||| |||||||||||    
T  18247185 taaatgattaaataatgcaagggtaaattgccaa--ttagcgattacatggaccaatttttaaa 18247124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 19892634 - 19892698
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||  | ||||||||||||||  || |||||||||||    
T  19892634 ttaaatgattaaacaatgcaagggtaaattgttaggattaacgattacagagaccaatttttaaa 19892698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 29646688 - 29646748
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttt 507  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||||| | |||||||    
T  29646688 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgcaccaatttt 29646748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 35920330 - 35920254
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||   |||||||| |||||||| | ||||| ||| ||||| || ||||||||||| ||||| |||||    
T  35920330 ttaaatgattaatgattgcaaggctaatttgcaaggattagcgaatacattgaccaatttttaaacgatccctaatt 35920254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 39453625 - 39453701
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||   |||||||| || ||||| ||||||| ||| |||| ||| |||||||||||||| || |||||    
T  39453625 ttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagggaccaatttttaaatgacccctaatt 39453701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 42067850 - 42067926
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||| |||||| ||| | ||||||| ||||| | |||||| ||| ||| |||||||||| || |||||    
T  42067850 ttaaatgattaaagtttgcaggggcagtttgccaggattatcaattacagggaccaaattttaaatgacccctaatt 42067926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 3e-40; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 327 - 523
Target Start/End: Original strand, 3556215 - 3556411
Alignment:
Q  327 catgggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcacgtcattattaagctaatcagtgacttggcactgattaa 426  Q
    ||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||     
T  3556215 catgggtattttggtcttttcgcatttgtctgatgagttgaggggtatttttgtccattcacgtaattattaagctaatcaatgacgtggcattgattag 3556314  T
Q  427 ctgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||| ||| | |||  || | |||||||||||||   ||||||| || ||||| | ||||||||||||||  || ||||||||||| || ||||||||    
T  3556315 ctgagttaaaggaggaaattttaaatgattaaagaatgcaaggctagtttgcaaggattaacgattacagagaccaatttttaaacgacccataatt 3556411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 399 - 514
Target Start/End: Original strand, 43741954 - 43742069
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  43741954 agctaatcaatgacgtggcaccgattaactgggttgagggatcaatttttaaatgattaaactttgcaagggtaatttgtcaggattaatgattacatgg 43742053  T
Q  499 atcaatttttaaatga 514  Q
    | ||||||||||||||    
T  43742054 accaatttttaaatga 43742069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 3653406 - 3653481
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  3653406 ttaaatgattaaactttgcaagggtaatttgcca-gattaacgattacatggaccaatttttaaatgacccataatt 3653481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 3555998 - 3556117
Alignment:
Q  142 ggtacttggagttgcttcttaatgtgtggtggcgtgggaaatggattccctgtgttcaacnnnnnnnnnnngacatttaaggaagtgggttgtacaacaa 241  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||           ||  ||||||||||||||||||| | |||    
T  3555998 ggtacttggagttgtttcttaatgtgtggtggcgtaggaaatggattccttgtgttcaacaaaaaaaaaaagatgtttaaggaagtgggttgtatagcaa 3556097  T
Q  242 acaaagatgaagaaatttct 261  Q
    ||||||||||||||||||||    
T  3556098 acaaagatgaagaaatttct 3556117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 6589685 - 6589761
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| || |||||    
T  6589685 ttaaatgattaaactttgcaagggtaatttgccagaattaacgattacatggaccaatttttaaatgacccttaatt 6589761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 28230065 - 28230141
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||||    
T  28230065 ttaaatgattaaactttgaaagggtaatttgctaggattaacgattacagggaccaatttttaaatgacccataatt 28230141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 447 - 517
Target Start/End: Complemental strand, 3652313 - 3652243
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatcc 517  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| || || |||||||| ||||||||    
T  3652313 ttaaatgattaaactttgcaagggtaatttgccatgattaacgattatattgaccaatttttgaatgatcc 3652243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 202682 - 202758
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||  ||||||||||||| || |||||    
T  202682 ttaaatgattaaactctgcaaggctaatttgccaggattaacgattacatggacgaatttttaaatgacccctaatt 202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 39936573 - 39936633
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttt 507  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  39936573 ttaaatgattaaactttgcaagggtaatttgccaggattaacgattacaaggaccaatttt 39936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 3555880 - 3555935
Alignment:
Q  24 tgttgcatctgtgattgaaatacaccttgatgtttttaggggtttgttcaaattac 79  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3555880 tgttgtatctgtgtttgaaatacaccttgatgtttttaggggtttgttcaaattac 3555935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 523
Target Start/End: Complemental strand, 28228770 - 28228696
Alignment:
Q  449 aaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||| ||| |||||||||||||| || |||||    
T  28228770 aaatgattaaactttgaaagagtaatttgccacgattaacgattacagggaccaatttttaaatgacccctaatt 28228696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 3653271 - 3653325
Alignment:
Q  333 tattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattca 387  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  3653271 tattttggtcttttcgcatttgtctgatgagtctaggggtatttttgtccattca 3653325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 36859503 - 36859441
Alignment:
Q  17 atgcttatgttgcatctgtgattgaaatacaccttgatgtttttaggggtttgttcaaattac 79  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  36859503 atgcttgtgttgtatctgtgcttgaaatactccttgatgtttttaggggttagttcaaattac 36859441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 25231174 - 25231238
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||| |||||||||||||||||| | ||||| ||| |||||||| |||||||||||    
T  25231174 ttaaatgattaaagtttgcaagggtaatttgctaggattagcgaatacatggaccaatttttaaa 25231238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 25892501 - 25892429
Alignment:
Q  442 aattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||| ||||||||||||||  || ||||||||||||||| ||||| ||||||||||||  |||||||||||||    
T  25892501 aatttttaaatgattaaacaatggaagggtaatttgccaggattagcgattacatggacaaatttttaaatga 25892429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 41587336 - 41587270
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  |||||||||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  41587336 ttaaatgattaaacaatgcaagggtaattttccaggattaacgattaca-ggaccaatttttaaatga 41587270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 6573153 - 6573082
Alignment:
Q  442 aattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||| ||||||||||||||  ||||||| ||| |||||||||||| ||||||||||||  |||||||||||||    
T  6573153 aatttttaaatgattaaacaatgcaagg-taaattgccaagattagcgattacatggacaaatttttaaatga 6573082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 6573650 - 6573578
Alignment:
Q  442 aattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||| ||||||||||||||  | ||||||||| |||||| ||||| ||||||||||||  |||||||||||||    
T  6573650 aatttttaaatgattaaacaattcaagggtaaattgccaggattagcgattacatggacgaatttttaaatga 6573578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 10712865 - 10712761
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||| | ||||||| ||||  ||||||| || | ||||||||||||||  ||||||||||| |||||| |||||| ||||| | ||| ||||||    
T  10712865 agtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaatgattataaggaccaattt 10712766  T
Q  507 ttaaa 511  Q
    |||||    
T  10712765 ttaaa 10712761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 15848230 - 15848126
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| || ||| ||||| |||||||| ||| ||||||    
T  15848230 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcgattacagggaccaattt 15848131  T
Q  507 ttaaa 511  Q
    |||||    
T  15848130 ttaaa 15848126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 36382303 - 36382199
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||| || | ||||||||||||||  ||||||||||| ||| || ||||| |||||| | ||| ||||||    
T  36382303 agtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattatagggaccaattt 36382204  T
Q  507 ttaaa 511  Q
    |||||    
T  36382203 ttaaa 36382199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 36479820 - 36479756
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  |||||||||||  ||| ||||||| |||||||||||| |||||||||||    
T  36479820 ttaaatgattaaacaatgcaagggtaaaatgctaagattagcgattacatggaccaatttttaaa 36479756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 39935557 - 39935493
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||| | | | |||||||||||    
T  39935557 ttaaatgattaaactttgcaaggataatttgtcaggattaacgattataagaaccaatttttaaa 39935493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 8710792 - 8710859
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| ||||||||||||  |||||||||||||    
T  8710792 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggactaatttttaaatga 8710859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 15604441 - 15604374
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  15604441 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 15604374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 28226068 - 28226135
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  28226068 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 28226135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 16099190 - 16099081
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| |||||  ||||||| ||| |||||||||||||    
T  16099190 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagtgattacagggaccaatttttaaatg 16099091  T
Q  514 atccataatt 523  Q
    | || |||||    
T  16099090 acccctaatt 16099081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 39498445 - 39498348
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  || | |||||| |||||| |||||||||||||| ||| |||||||||||    
T  39498445 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaa 39498348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 2318260 - 2318196
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||||||  |||| ||||||||| || |||||||||||    
T  2318260 ttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacatagaccaatttttaaa 2318196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 459
Target Start/End: Original strand, 11349483 - 11349543
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaa 459  Q
    |||||||||  ||| ||||||||||||||||||||||||||  || | |||||||||||||    
T  11349483 agctaatcaaagacgtggcactgattaactgggttgagggacgaaattttaaatgattaaa 11349543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 44714047 - 44714151
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| | |||||| |||  |||||    
T  44714047 agtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaattt 44714146  T
Q  507 ttaaa 511  Q
    |||||    
T  44714147 ttaaa 44714151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 45556214 - 45556138
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  |||| || ||| |||||| ||||| |||||||| ||| ||||||||||| ||||| |||||    
T  45556214 ttaaatgattaaacaatgcagggataaattgccaggattagcgattacagggaccaatttttaaacgatccctaatt 45556138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 15604663 - 15604730
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  | |||||||||||    
T  15604663 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactagtttttaaatga 15604730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 36859398 - 36859345
Alignment:
Q  145 acttggagttgcttcttaatgtgtggtggcgtgggaaatggattccctgtgttcaac 201  Q
    ||||||||||||||||| |||||||||   ||||||||||||||| ||||| |||||    
T  36859398 acttggagttgcttcttcatgtgtggt---gtgggaaatggattcactgtggtcaac 36859345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 511
Target Start/End: Original strand, 44045290 - 44045392
Alignment:
Q  409 tgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    |||| ||||| |||||||||||| |||||||  || | ||||||||||||   |||||||| || ||||| | ||||| ||| |||| ||| ||||||||    
T  44045290 tgacgtggcagtgattaactgggatgagggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 44045389  T
Q  509 aaa 511  Q
    |||    
T  44045390 aaa 44045392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 514
Target Start/End: Original strand, 6577557 - 6577670
Alignment:
Q  401 ctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggat 500  Q
    ||||| |||||| ||||| ||||||| ||||  ||||||   ||| |||||| |||||||  |||||  ||||||||||| ||||  |||||||| |||     
T  6577557 ctaattagtgacgtggcagtgattaagtgggaagagggacggatttttaaataattaaacaatgcaatagtaatttgccaggattggcgattacagggac 6577656  T
Q  501 caatttttaaatga 514  Q
     |||||||||||||    
T  6577657 aaatttttaaatga 6577670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 6658013 - 6657916
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| |||||  ||||||| ||| |||||||||||    
T  6658013 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccatgattagtgattacagggaccaatttttaaa 6657916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 11163316 - 11163413
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||  ||||| |||||| ||||| |||||||| ||| |||||||||||    
T  11163316 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcagaggtaaattgccaggattagcgattacagggaccaatttttaaa 11163413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 517
Target Start/End: Complemental strand, 17266527 - 17266430
Alignment:
Q  420 tgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatcc 517  Q
    ||||||| ||||  |||||| ||| | ||||||||||||| |||| ||||| || ||| || ||| ||||| ||||| || || ||||||||||||||    
T  17266527 tgattaagtggggagagggaccaaattttaaatgattaaattttggaagggaaaattgtcaggataaacgaatacattgaccattttttaaatgatcc 17266430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 21370480 - 21370592
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||| | | ||||| |||| | |||||  || | |||||| |||||   |||||| | || ||||| | ||||||||| |||||||    
T  21370480 agctaatcagtgacgtggtagtaattaattgggctcagggacgaaattttaaattattaatgattgcaatgctagtttgcaaggattaacgaatacatgg 21370579  T
Q  499 atcaatttttaaa 511  Q
    |||||||||||||    
T  21370580 atcaatttttaaa 21370592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 523
Target Start/End: Original strand, 37895633 - 37895749
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||||| |||| |||||| ||||| |||||||  | | || |||    
T  37895633 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagtgtaaattgccaggattagcgattacgggaaccatttt 37895732  T
Q  507 ttaaatgatccataatt 523  Q
    ||||| || ||||||||    
T  37895733 ttaaacgacccataatt 37895749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 39498605 - 39498681
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||   |||||||| || ||||| | ||||| ||| |||||||| ||||||||||| ||||| |||||    
T  39498605 ttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgatccctaatt 39498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 4e-36; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 16606582 - 16606700
Alignment:
Q  142 ggtacttggagttgcttcttaatgtgtggtggcgtgggaaatggattccctgtgttcaacnnnnnnnnnnngacatttaaggaagtgggttgtacaacaa 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||| |||    
T  16606582 ggtacttggagttgcttcttaatgtgtggtggcgtgggaaatggattccctgtgttcaac-aaaaaaaaaagacatttaaggaagtgggttgtacagcaa 16606680  T
Q  242 acaaagatgaagaaatttct 261  Q
    ||||||||||||||||||||    
T  16606681 acaaagatgaagaaatttct 16606700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 390 - 512
Target Start/End: Complemental strand, 29320190 - 29320066
Alignment:
Q  390 tcattattaagctaatcagtgacttggcactgattaactgggttgag--ggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaa 487  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||  ||| ||||||| |||||||||||||||| ||||||||||||  | ||||||    
T  29320190 tcattattaagctaatcagtgacgtgacactgattaactgggttgagagggaccaattctaaaatgattaaactttgaaagggtaatttgttaggattaa 29320091  T
Q  488 cgattacatggatcaatttttaaat 512  Q
     ||||||| ||| ||||||||||||    
T  29320090 ggattacagggaccaatttttaaat 29320066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 16606479 - 16606534
Alignment:
Q  24 tgttgcatctgtgattgaaatacaccttgatgtttttaggggtttgttcaaattac 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16606479 tgttgcatctgtgtttgaaatacaccttgatgtttttaggggtttgttcaaattac 16606534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 29321181 - 29321307
Alignment:
Q  397 taagctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacat 496  Q
    ||||| ||| |||||| ||||| ||||||||| |||||||| | ||||||||||||||||||| |||| || ||||||||||||  ||||||||||| |     
T  29321181 taagcaaattagtgacgtggcagtgattaactaggttgaggaaccaattcttaaatgattaaaatttgaaaaggtaatttgccagaattaacgattatag 29321280  T
Q  497 ggatcaatttttaaatgatccataatt 523  Q
      | |||||||||||||| || |||||    
T  29321281 aaaccaatttttaaatgacccttaatt 29321307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 11446372 - 11446305
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||    
T  11446372 ttaaaagattaaactttgcaagggtaatttgccaggattaacgattccatgaaccaatttttaaatga 11446305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 30642472 - 30642548
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||  ||| ||||||||||||| ||||||||    
T  30642472 ttaaatgattaaactttgcaagactaatttgctaggattaacgattacaatgatgaatttttaaatgacccataatt 30642548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 32063662 - 32063738
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||   | |||||||||||||| || |||||    
T  32063662 ttaaatgattaaactttgcaagggtaatttgccagtattaacgattacagaaaccaatttttaaatgacccctaatt 32063738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 39667100 - 39667176
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  |||||||||||||| ||| |||||||||||||| ||| |||||||||||||| || |||||    
T  39667100 ttaaatgattaaacaatgcaagggtaatttaccaggattaacgattacagggaccaatttttaaatgacccgtaatt 39667176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 41582589 - 41582482
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| |||||||||| | |||||||  || | ||||||||||||  |||||| ||| ||||||||| |||||||||||| | ||| ||||||    
T  41582589 agtgacgtggcaatgattaactgtgatgagggacgaaattttaaatgattaacttttgcaggggcaatttgccaggattaacgattagagggaccaattt 41582490  T
Q  507 ttaaatga 514  Q
    ||||||||    
T  41582489 ttaaatga 41582482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 54858884 - 54858951
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||||||||||||||||  |||||||||||||    
T  54858884 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacatggactaatttttaaatga 54858951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 511
Target Start/End: Original strand, 55867323 - 55867504
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattc--acgtcattattaagctaatcag-tgacttggcactgattaa 426  Q
    ||||||||| |||||||| ||||   |||||||||| | ||||||||||||| ||||  | |||||| |   ||||||  | |||| ||||| |||||||    
T  55867323 gggtattttagtcttttcgcattgaactgatgagtcaaggggtatttttgtcaattccaatgtcatttt---gctaatttgatgacgtggcagtgattaa 55867419  T
Q  427 ctgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||   |||||  || | ||||||||||||||  |||||||||| ||||| | |||||||||||||||||| |||||||||||    
T  55867420 ctgggaatagggacgaaattttaaatgattaaacaatgcaagggtagtttgcaaggattaacgattacatggaccaatttttaaa 55867504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 23613444 - 23613347
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||||||||| |||||||||||| |||||||||||    
T  23613444 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaagattagcgattacatggaccaatttttaaa 23613347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 478
Target Start/End: Complemental strand, 55866261 - 55866180
Alignment:
Q  397 taagctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgc 478  Q
    ||||| |||||||||| ||||| | |||||||||||| ||||| ||||| ||||||||||| ||||||  ||||||||||||    
T  55866261 taagcaaatcagtgacgtggcagttattaactgggttcagggaccaatttttaaatgattatactttgagagggtaatttgc 55866180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 8438382 - 8438307
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||||| ||||||||||| ||||||||||||||| || |||||||||||||| || |||||    
T  8438382 ttaaatgattaaggtttgcaagagtaatttgccaggattaacgattacat-gaccaatttttaaatgacccctaatt 8438307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 515
Target Start/End: Complemental strand, 50503927 - 50503859
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||| ||||||||||||||||||||   |||||||||||||    
T  50503927 ttaaatgattaaacaatgcaagggtaaattgctaagattaacgattacatggactgatttttaaatgat 50503859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 5369082 - 5368973
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| ||||||||||| |    
T  5369082 tggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacaaggaccaatttttaaacg 5368983  T
Q  514 atccataatt 523  Q
    |||| |||||    
T  5368982 atccctaatt 5368973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 54713884 - 54713835
Alignment:
Q  336 tttggtcttttcacatttgtctgatgagtccatgggtatttttgtccatt 385  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  54713884 tttggtcttttcgcatttgtctgatgagtccaggggtatttttatccatt 54713835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 7451936 - 7451872
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  |||| |||||| |||||| |||||||||||||| ||| |||||||||||    
T  7451936 ttaaatgattaaacaatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaa 7451872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 8439550 - 8439614
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||  ||||||||| |||||||| | ||||||||||||||  ||||||||||||||    
T  8439550 ttaaatgattaatgtttgcaaggataatttgctaggattaacgattacaatgatcaatttttaaa 8439614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 11448055 - 11448119
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  |||||||||||||||| | ||||| ||||||||  ||||||||||||||    
T  11448055 ttaaatgattaaacaatgcaagggtaatttgcaaggattagcgattacagagatcaatttttaaa 11448119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Complemental strand, 27069012 - 27068944
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  ||||||||||||||    
T  27069012 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgat 27068944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 34765666 - 34765770
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||| ||||| |||||| ||||| |||||||||| | ||||||    
T  34765666 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcgattacatgaaccaattt 34765765  T
Q  507 ttaaa 511  Q
    |||||    
T  34765766 ttaaa 34765770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 37248338 - 37248274
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  37248338 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 37248274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 54087021 - 54087085
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || |||||||||||||| ||| |||||||||||    
T  54087021 ttaaatgattaaacaatgcaagggtaaattgtcatgattaacgattacagggaccaatttttaaa 54087085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 56014871 - 56014779
Alignment:
Q  403 aatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    |||||||||| ||||| |||||||||| | |||||||  || | ||||||||||||  |||||| ||| ||||||||| ||||| ||||||||    
T  56014871 aatcagtgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaacgtttgcaggggcaatttgccaggattagcgattaca 56014779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 3032684 - 3032617
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  3032684 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggactaatttttaaatga 3032617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 5818099 - 5818166
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || |||||||||||||| |||  |||||||||||||    
T  5818099 ttaaatgattaaacaatgcaagggtaaattgacaggattaacgattacagggactaatttttaaatga 5818166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 10408213 - 10408280
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  10408213 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 10408280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 39701233 - 39701300
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||| ||||| ||| |||||||||||||||||| ||  |||||||||||||    
T  39701233 ttaaatgattaaacaatgcaaaggtaaattgtcaagattaacgattacatagactaatttttaaatga 39701300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 514
Target Start/End: Original strand, 56015929 - 56016040
Alignment:
Q  403 aatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatca 502  Q
    |||||||||| ||||| |||||||||| | ||| |||  || | ||||||||||||  |||||| ||  |||||||||  |||| |||||| ||||| ||    
T  56015929 aatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaacgtttgcagggacaatttgccataattagcgattatatggacca 56016028  T
Q  503 atttttaaatga 514  Q
    ||||||||||||    
T  56016029 atttttaaatga 56016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 511
Target Start/End: Complemental strand, 50751027 - 50750925
Alignment:
Q  409 tgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    |||| ||||| | ||||| |||||| || ||  |||| ||||||||||||||  ||||||| |||||||||| ||||| |||||||| |||  |||||||    
T  50751027 tgacgtggcagtcattaagtgggttcagtgacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcgattacagggacgaattttt 50750928  T
Q  509 aaa 511  Q
    |||    
T  50750927 aaa 50750925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 27891686 - 27891621
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaat 512  Q
    ||||||||||||||  ||||||||||| ||||||| |||| |||||||| |||  |||||||||||    
T  27891686 ttaaatgattaaacaatgcaagggtaaattgccaaaattagcgattacagggactaatttttaaat 27891621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 30641620 - 30641546
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||||||| || |||||||||| | ||||||||||||||  ||  ||||||||||||| || |||||    
T  30641620 ttaaatgattaaactttgtaatggtaatttgcaaggattaacgattaca--gacaaatttttaaatgacccctaatt 30641546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 36009106 - 36009203
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| || ||| |||||||||||||| ||| |||||||||||    
T  36009106 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaatttccaggattaacgattacagggaccaatttttaaa 36009203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 40316989 - 40317054
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaat 512  Q
    ||||| |||||||||||| ||||||||||| ||| ||||||||||||||  |  ||||||||||||    
T  40316989 ttaaaggattaaactttgaaagggtaattttccaggattaacgattacagaggccaatttttaaat 40317054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 40327063 - 40327128
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaat 512  Q
    ||||| |||||||||||| ||||||||||| ||| ||||||||||||||  |  ||||||||||||    
T  40327063 ttaaaggattaaactttgaaagggtaattttccaggattaacgattacagaggccaatttttaaat 40327128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 44967331 - 44967428
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| |||||||||||    
T  44967331 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 44967428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 18831451 - 18831387
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| || ||| ||||| |||||||| ||| |||||||||||    
T  18831451 ttaaatgattaaacaatgcaagggtaaattaccaggattagcgattacagggaccaatttttaaa 18831387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 24711213 - 24711149
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||| ||||| |||||| ||||| |||||||| ||| |||||||||||    
T  24711213 ttaaatgattaaacaatgcaacggtaaattgccaggattagcgattacagggaccaatttttaaa 24711149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 32062691 - 32062615
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||| ||| ||||| ||||||| || |||||| | ||||| ||| |||||||||||||| || |||||    
T  32062691 ttaaatgattaaattttacaaggctaatttgtcaggattaatgtttacaaggaccaatttttaaatgacccctaatt 32062615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 51692655 - 51692591
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||| |||||||||  ||||||||||| ||| || ||||| ||||||||| ||||||||||||||    
T  51692655 ttaagtgattaaacaatgcaagggtaaattgtcaggattagcgattacatagatcaatttttaaa 51692591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 10407991 - 10407924
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  10407991 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggagtaatttttaaatga 10407924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 11524051 - 11523984
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||  |||||| ||||||||||||||  ||  |||||||||||||    
T  11524051 ttaaatgattaaacaatgcaagggtatattgccaggattaacgattacagagactaatttttaaatga 11523984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 514
Target Start/End: Complemental strand, 16605752 - 16605637
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    ||||||| |||||| ||||| ||||||| ||||  ||||||  || | |||||||||||| |  ||||||||||| ||| || | || ||||||||| ||    
T  16605752 agctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaatcaatgcaagggtaaattggcaggtttgacgattacaggg 16605653  T
Q  499 atcaatttttaaatga 514  Q
    |  |||||||||||||    
T  16605652 actaatttttaaatga 16605637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 27069234 - 27069301
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| | |||||| |||  |||||||||||||    
T  27069234 ttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaatttttaaatga 27069301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 45463175 - 45463108
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  ||  |||||||||||||    
T  45463175 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagactaatttttaaatga 45463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 50504149 - 50504216
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||  ||||||||||||||  ||  |||||||||||||    
T  50504149 ttaaatgattaaacaatgcaagggtaaattgcctggattaacgattacagagactaatttttaaatga 50504216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 54858662 - 54858595
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  54858662 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggactaatttttaaatga 54858595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 40387569 - 40387503
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||||||||||  |||||| ||| ||||||||| ||||| ||| |||| ||| |||||||||||||    
T  40387569 ttaaatgattaacttttgcaggggcaatttgccaggattagcgaatacagggaccaatttttaaatg 40387503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 4982828 - 4982763
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaat 512  Q
    ||||||||||||   |||||||| ||| |||||||||||| | ||||||||||  |||||||||||    
T  4982828 ttaaatgattaacaattgcaaggctaaattgccaagattagcaattacatggacgaatttttaaat 4982763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 43155789 - 43155886
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | |||||||||||||   |||| || ||| |||||| |||||||||||||| ||| |||||||||||    
T  43155789 tggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcagggataaattgccaggattaacgattacagggaccaatttttaaa 43155886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 49879469 - 49879566
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||| || ||||| ||||||||  ||||| ||||||||    
T  49879469 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagatcagtttttaaa 49879566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 523
Target Start/End: Original strand, 52909594 - 52909655
Alignment:
Q  462 ttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||| || ||||| | ||||| ||| ||||| || |||||||||||||||||||||||    
T  52909594 ttgcaaggctagtttgcaaggattagcgaatacatagaccaatttttaaatgatccataatt 52909655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 14801878 - 14801774
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  | ||||||||| ||| || ||||| ||||||||  || ||||||    
T  14801878 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcgattacaaagaccaattt 14801779  T
Q  507 ttaaa 511  Q
    |||||    
T  14801778 ttaaa 14801774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 17356248 - 17356312
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||| ||||  |||||| |||| |||||||||||| ||| |||| ||| |||||||||||    
T  17356248 ttaaatgatcaaacaatgcaagagtaaattgccaagattagcgaatacagggaccaatttttaaa 17356312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 24349816 - 24349712
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||||||||  ||||||  || | ||||||||||||   |||||||| || ||||| | ||||| ||| |||| ||| ||||||    
T  24349816 agtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattt 24349717  T
Q  507 ttaaa 511  Q
    |||||    
T  24349716 ttaaa 24349712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 24411460 - 24411396
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || | ||| |||||||| ||| |||||||||||    
T  24411460 ttaaatgattaaacaatgcaagggtaaattgtcagggttagcgattacagggaccaatttttaaa 24411396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 24711406 - 24711470
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||   |||||||| || ||||| | |||||||||| ||||||| |||||||||||    
T  24711406 ttaaatgattaatgattgcaaggctagtttgcaaggattaacgatgacatggaccaatttttaaa 24711470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 35508566 - 35508630
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||  |  ||||||||||||| |||| ||||||||||    
T  35508566 ttaaatgattaaacaatgcaagggtaaattgttagaattaacgattacaaggattaatttttaaa 35508630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 39539244 - 39539308
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||   ||||||| |||||||| |  |||||||||||||| || |||||||||||    
T  39539244 ttaaatgattaaagaatgcaaggctaatttgcaagaattaacgattacattgaccaatttttaaa 39539308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 41583557 - 41583633
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||| ||| ||||||||| ||||| ||| ||||   |||||||||||||||| || |||||    
T  41583557 ttaaatgattaacttttgcaggggcaatttgccaggattagcgaatacagaaatcaatttttaaatgacccctaatt 41583633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 50418770 - 50418706
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||   |||||||| || ||||| | |||||||||||||| ||| |||||||||||    
T  50418770 ttaaatgattaatgattgcaaggctagtttgcaaggattaacgattacagggaccaatttttaaa 50418706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 50418963 - 50419027
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||  |||||| ||||| |||||| | ||| |||||||||||    
T  50418963 ttaaatgattaaacaatgcaagggtagattgccaggattagcgattagagggaccaatttttaaa 50419027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 50751800 - 50751872
Alignment:
Q  423 ttaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    |||| |||||| |||||  |||| ||||||||||||||  ||||||| ||||||| || ||||| ||||||||    
T  50751800 ttaagtgggttcagggacgaatttttaaatgattaaacaatgcaaggttaatttgtcaggattagcgattaca 50751872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 53701954 - 53701850
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||| ||| ||| || |||||  |||||||  |||||||||    
T  53701954 agtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatgcaaggataaattgtcaggattagagattacagagatcaattt 53701855  T
Q  507 ttaaa 511  Q
    |||||    
T  53701854 ttaaa 53701850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 471 - 511
Target Start/End: Original strand, 54435447 - 54435487
Alignment:
Q  471 taatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||| | |||| |||||||||||||||||||||||||    
T  54435447 taatttgcaaggattgacgattacatggatcaatttttaaa 54435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 514
Target Start/End: Complemental strand, 9337178 - 9337061
Alignment:
Q  397 taagctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacat 496  Q
    ||||| ||| |||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||     
T  9337178 taagcaaattagtgacgtggcagtgattaactaggttgagggaccaattcttaaatgattaaactttgaaagggtaatttgccaaaattaacgattacaa 9337079  T
Q  497 ggatcaatttttaaatga 514  Q
    ||| ||||||| ||||||    
T  9337078 ggaccaattttaaaatga 9337061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 424 - 523
Target Start/End: Original strand, 10749813 - 10749910
Alignment:
Q  424 taactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||||| |||||  ||| |||||||  ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||    
T  10749813 taactgggttgagggaccaatt--taagtgattaacgtttgcaagggtaatttgacaggattaacgattacatggaccaatttttaaatgatccctaatt 10749910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 2535876 - 2535952
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||| || |||||    
T  2535876 ttaaatgattaaactttgtaagggtaatttgccaggattaacgattacagggaccaatttttaaatgacccctaatt 2535952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 447 - 517
Target Start/End: Original strand, 22915684 - 22915754
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatcc 517  Q
    ||||||||||||||  ||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||    
T  22915684 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggaccaatttttaaacgatcc 22915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 523
Target Start/End: Original strand, 16388812 - 16388928
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| | |||||||| | ||||||    
T  16388812 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacatgaaccaattt 16388911  T
Q  507 ttaaatgatccataatt 523  Q
    |||||||| || |||||    
T  16388912 ttaaatgacccctaatt 16388928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 25124665 - 25124598
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||||||  |||||||||||||    
T  25124665 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacatggactaatttttaaatga 25124598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 39474648 - 39474581
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||||||||| |||||||| | || |||||||||||||    
T  39474648 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacaagaattaatttttaaatga 39474581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 234064 - 234132
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||||| |||||| |||  ||||||||||||||    
T  234064 ttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgat 234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 710475 - 710543
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||||| |||||| |||  ||||||||||||||    
T  710475 ttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgat 710543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 747687 - 747755
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||||| |||||| |||  ||||||||||||||    
T  747687 ttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgat 747755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 871582 - 871650
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||| ||||||| |||||| |||  ||||||||||||||    
T  871582 ttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgat 871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 4405986 - 4406050
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||| |||||||||||| |||| | ||||||| | |||||||| |||||||||||    
T  4405986 ttaaatgattaaacattgcaagggtaaattgcaaggattaacaaatacatggaccaatttttaaa 4406050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 8316914 - 8316978
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  8316914 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggaccaatttttaaa 8316978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 8746426 - 8746350
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  ||||||||||||||||| || ||||||||||||||  || | |||||||||||| || |||||    
T  8746426 ttaaatgattaaggtttgcaagggtaatttgtcacgattaacgattacagtgaccgatttttaaatgacccctaatt 8746350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 13186162 - 13186086
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||||| | ||||||||||| ||||| |||||    
T  13186162 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgaaccaatttttaaacgatccctaatt 13186086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 23698570 - 23698634
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  23698570 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 23698634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 36928618 - 36928514
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||| || ||||| ||||||||| || ||||||    
T  36928618 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatagaccaattt 36928519  T
Q  507 ttaaa 511  Q
    |||||    
T  36928518 ttaaa 36928514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 40318290 - 40318354
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||||||  ||||||||||    
T  40318290 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacatggactaatttttaaa 40318354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 43181478 - 43181554
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  || |||| |||||| | | ||||||||||| |||||||||||||||||| ||||| |||||    
T  43181478 ttaaatgattaaacaatgtaaggctaatttacaaggattaacgattgcatggatcaatttttaaacgatccctaatt 43181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 7983530 - 7983463
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  7983530 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 7983463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 10445659 - 10445726
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  10445659 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatga 10445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 15230255 - 15230322
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| |||||||| |||||||| |||  |||||||||||||    
T  15230255 ttaaatgattaaacaatgcaagggtaaattgtcaagattagcgattacagggactaatttttaaatga 15230322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 23505154 - 23505087
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||   |||||||||||| |||||||||||| | ||||||||||  |||||||||||||    
T  23505154 ttaaatgattaacaattgcaagggtaaattgccaagattagcaattacatggacgaatttttaaatga 23505087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 511
Target Start/End: Complemental strand, 34060618 - 34060527
Alignment:
Q  420 tgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||| ||||||||||| || | |||||||||||||   ||||| |  ||||||| | ||||| |||||||||||| |||||||||||    
T  34060618 tgattaacttggttgagggatgaagttttaaatgattaaagaatgcaacgacaatttgcaaggattagcgattacatggaccaatttttaaa 34060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 44664610 - 44664543
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||| ||| |||||| |||||||||||||| |||  |||||||||||||    
T  44664610 ttaaatgattaaacaatgcaaggttaaattgccaggattaacgattacagggactaatttttaaatga 44664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 27500424 - 27500478
Alignment:
Q  469 ggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||  || |||||||||||||||||| |||||||||||||| ||||||||    
T  27500424 ggtaatttttcaggattaacgattacatggaccaatttttaaatgacccataatt 27500478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 2534830 - 2534721
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||||||||   |||||  || | ||||||||||||||  |||||| ||| ||||| | ||||| |||||||||| | ||||||||||| |    
T  2534830 tggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaagagtagtttgcaaggattagcgattacatgtaccaatttttaaacg 2534731  T
Q  514 atccataatt 523  Q
    | ||||||||    
T  2534730 acccataatt 2534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 514
Target Start/End: Original strand, 13084775 - 13084880
Alignment:
Q  409 tgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    |||| ||||| | ||||| ||||||| |||| ||||| |||| |||||||| ||||  |||| ||  | |||||||||| || |||||||| ||||||||    
T  13084775 tgacatggcagtaattaattgggttgggggaccaatttttaagtgattaaattttggcagggcaaaattccaagattaaggaatacatggaccaattttt 13084874  T
Q  509 aaatga 514  Q
    ||||||    
T  13084875 aaatga 13084880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 23663807 - 23663904
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  || |||||||||||    
T  23663807 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaa 23663904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 11761942 - 11761866
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||| ||| |||||| |||||||||||||||||  ||  ||||||||||| |||| |||||    
T  11761942 ttaaatgattaacgtttgcaggggcaatttgacaagattaacgattacagagacgaatttttaaataatccctaatt 11761866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 11763002 - 11763078
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||| | | |||||| || ||||| |||||||| ||| ||||||||||||||||| |||||    
T  11763002 ttaaatgattaacgtttgcaggagcaatttgtcaggattagcgattacaaggaccaatttttaaatgatccttaatt 11763078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 12273179 - 12273243
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| |  |||||||||||||| ||| |||||||||||    
T  12273179 ttaaatgattaaacaatgcaagggtaaattgacgggattaacgattacagggaccaatttttaaa 12273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 516
Target Start/End: Complemental strand, 22915490 - 22915422
Alignment:
Q  448 taaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatc 516  Q
    |||||||||||   |||||||| || ||||| | ||||| |||||||||||| ||||||||||||||||    
T  22915490 taaatgattaatgattgcaaggctagtttgcaaggattagcgattacatggaccaatttttaaatgatc 22915422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 28339260 - 28339304
Alignment:
Q  422 attaactgggttgagggatcaattcttaaatgattaaactttgca 466  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||    
T  28339260 attaactgggttgagggaccaatttttaaatgattaaattttgca 28339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 31608799 - 31608903
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||| ||  ||||||||||| |||| | ||||| ||| |||||||| ||||||    
T  31608799 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattagacaatgcaagggtaaattgcaaggattagcgaatacatggaccaattt 31608898  T
Q  507 ttaaa 511  Q
    |||||    
T  31608899 ttaaa 31608903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 34061654 - 34061718
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||   |||||||| ||||||| | ||||| ||| ||||||||||||||||||||    
T  34061654 ttaaatgattaaagaatgcaagggcaatttgcaaggattagcgaatacatggatcaatttttaaa 34061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 39071778 - 39071714
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| ||| |||||||||||    
T  39071778 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttttaaa 39071714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 8998013 - 8998080
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||||| |  |||||||||||||    
T  8998013 ttaaatgattaaacaatgcaagggtaaattgtcatgattagcgattacatgaactaatttttaaatga 8998080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 15230033 - 15229966
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  | ||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  15230033 ttaaatgattaaacaatccaagggtaaattgccaggattagcgattacagggactaatttttaaatga 15229966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 499
Target Start/End: Original strand, 21433018 - 21433069
Alignment:
Q  448 taaatgattaaactttgcaagggtaatttgccaagattaacgattacatgga 499  Q
    |||||||||||||  ||||||||||| ||| ||| |||||||||||||||||    
T  21433018 taaatgattaaacaatgcaagggtaaattgtcaaaattaacgattacatgga 21433069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 35634423 - 35634490
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  35634423 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggactaatttttaaatga 35634490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 37542326 - 37542259
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||| | |||  |||||||||||||    
T  37542326 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaaagggactaatttttaaatga 37542259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 523
Target Start/End: Original strand, 4994985 - 4995058
Alignment:
Q  449 aaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  ||||||||||| ||| || ||||| |||||||| ||| |||||||||||||| || |||||    
T  4994985 aaatgattaaacaatgcaagggtaaattgtcaggattagcgattaca-ggaccaatttttaaatgacccctaatt 4995058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 493
Target Start/End: Original strand, 8747563 - 8747636
Alignment:
Q  420 tgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgatta 493  Q
    ||||||| |||||| |||||  || | ||||||||||||  ||||||||||||||||  || ||||||||||||    
T  8747563 tgattaagtgggttaagggacgaaattttaaatgattaatgtttgcaagggtaatttttcaggattaacgatta 8747636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 520
Target Start/End: Original strand, 31873225 - 31873298
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccata 520  Q
    ||||||||||||| ||||  |||| || |||||||||||||||| || | ||| || ||||||||||| |||||    
T  31873225 ttaaatgattaaattttgggagggcaaattgccaagattaacgaataaaaggaccattttttaaatgacccata 31873298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 511
Target Start/End: Original strand, 42803535 - 42803608
Alignment:
Q  438 gatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||| ||||||||||||||  ||||||||||| |||||| ||||   ||||| | ||| |||||||||||    
T  42803535 gatcaatttttaaatgattaaacaatgcaagggtaaattgccacgattggtgattatagggaccaatttttaaa 42803608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 8316755 - 8316691
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||   |||||||| || ||||| | ||||||||| |||||||| |||||||||||    
T  8316755 ttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacatggaccaatttttaaa 8316691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 511
Target Start/End: Complemental strand, 20385718 - 20385606
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| | |||||||||| | |||||  || | ||||||||||||   |||||||  || ||||| | ||||| ||| |||| ||    
T  20385718 agctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacaggg 20385619  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  20385618 accaatttttaaa 20385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 30459521 - 30459461
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaa 459  Q
    |||||||||||||| || ||||| |||| |||||||| ||| ||||| |||| ||||||||    
T  30459521 agctaatcagtgacatgacactggttaagtgggttgaaggaccaatttttaagtgattaaa 30459461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 26463326 - 26463217
Alignment:
Q  402 taatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatc 501  Q
    ||||||||||| ||||| |||||||||||| |||||||  || | |||||||||||||||||||||||||||||||||| ||||||||| |||| ||| |    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaactttgcaagggtaatttgccaggattaacgaatacagggacc 26463227  T
Q  502 aatttttaaa 511  Q
    ||||||||||    
T  26463226 aatttttaaa 26463217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 28498303 - 28498427
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| |||||||||||| | ||||| ||| | ||||||||||||||||||  |||||| ||||||| ||||| |||||||| ||    
T  28498303 agctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaaactttgggagggtagtttgccaggattagcgattacaagg 28498402  T
Q  499 atcaatttttaaatgatccataatt 523  Q
    | |||||||||||||| || |||||    
T  28498403 accaatttttaaatgagccctaatt 28498427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 15116513 - 15116622
Alignment:
Q  402 taatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatc 501  Q
    ||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| | ||||| |||||||  ||| |    
T  15116513 taatcagtgacgtggcatcgattaactgggttgagggaccaatttttaaatgattaaactttgcaaggctagtttgcaaggattagcgattacgaggacc 15116612  T
Q  502 aatttttaaa 511  Q
    ||||||||||    
T  15116613 aatttttaaa 15116622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 29810714 - 29810838
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| |||||||||||| | ||||| ||| | ||||||||||||||||||  |||||| ||||||| |||||  ||||||| ||    
T  29810714 agctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaaactttgggagggtagtttgccatgattagtgattacaagg 29810813  T
Q  499 atcaatttttaaatgatccataatt 523  Q
    | |||||||||||||| || |||||    
T  29810814 accaatttttaaatgagccctaatt 29810838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 399 - 514
Target Start/End: Complemental strand, 13378675 - 13378560
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||| |||   |||| || |||||| ||||||| | |||| ||    
T  13378675 agctaatcagtgacgtggcactgattaactgggttgagggaccaatttttaagtgattaaattttaggagggcaaattgccaggattaacaaatacaagg 13378576  T
Q  499 atcaatttttaaatga 514  Q
    | || |||||||||||    
T  13378575 accattttttaaatga 13378560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 8090205 - 8090317
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||| ||| ||||| | |||||||||| | ||||| ||| | |||||||||||||||||||||||||||||||| | |||||  || |||| ||    
T  8090205 agctaatcagcgacgtggcaataattaactgggctcagggaccaaattttaaatgattaaactttgcaagggtaatttgcaaggattagtgaatacaagg 8090304  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  8090305 accaatttttaaa 8090317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 434 - 523
Target Start/End: Complemental strand, 24210646 - 24210557
Alignment:
Q  434 gagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||| || | |||||||||||||||||||||||||||||||| | ||||||| ||||||  || |||||||||||||| || |||||    
T  24210646 gagggatgaaattttaaatgattaaactttgcaagggtaatttgctatgattaacaattacagagaccaatttttaaatgacccctaatt 24210557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 12408472 - 12408561
Alignment:
Q  422 attaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||| | ||||||||| | ||||||||||||||||||||||| |||||||| | ||||| ||| |||| ||| ||| |||||||    
T  12408472 attaactgggctcagggatcaaattttaaatgattaaactttgcaaggataatttgcaaggattagcgaatacaaggaccaacttttaaa 12408561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 516
Target Start/End: Complemental strand, 15115441 - 15115372
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatc 516  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||| | ||| ||||||||||| ||||    
T  15115441 ttaaatgattaaactttgcaaggctaatttgcaaggattaacgattatagggaccaatttttaaacgatc 15115372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 17734456 - 17734565
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||  | ||||| |||||||||||||||||||||||| |    
T  17734456 tggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgataggattagcgattacatggatcaatttttaaacg 17734555  T
Q  514 atccataatt 523  Q
    | ||||||||    
T  17734556 acccataatt 17734565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 30803996 - 30803899
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  || |||||||| |||||| ||||||||||||||| ||||||||||||||    
T  30803996 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaagggtaaattgccaggattaacgattacatagatcaatttttaaa 30803899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 12407658 - 12407534
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    ||||||| |||||| ||||| | ||||||| |||| ||||| ||| | ||||||||||||||||||| || ||||||| | | ||||| ||| ||||  |    
T  12407658 agctaattagtgacgtggcagtaattaactaggttcagggaccaaattttaaatgattaaactttgctagagtaatttacaaggattagcgaatacagag 12407559  T
Q  499 atcaatttttaaatgatccataatt 523  Q
    | ||||||||||| ||||| |||||    
T  12407558 accaatttttaaacgatccttaatt 12407534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 33517636 - 33517560
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| ||||||||||| ||||| |||||    
T  33517636 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgatccctaatt 33517560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 8089570 - 8089481
Alignment:
Q  422 attaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| |||||| |||||  || | ||||||||||||||  |||||||||||||||| | |||||||||||| | ||| |||||||||||    
T  8089570 attaagtgggttaagggacgaaattttaaatgattaaacaatgcaagggtaatttgcaaggattaacgattatagggaccaatttttaaa 8089481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 26464492 - 26464601
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||  |||   |||| || |||||| ||||||| | |||| ||| || ||||||||||    
T  26464492 tggcactgattaactaggttgagggatcaatttttaagtgattaatttttaggagggaaaattgccaggattaacaaatacagggaccattttttaaatg 26464591  T
Q  514 atccataatt 523  Q
    | || |||||    
T  26464592 acccctaatt 26464601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 12080778 - 12080674
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| ||||||    
T  12080778 agtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccatgattagcgattacagggagcaattt 12080679  T
Q  507 ttaaa 511  Q
    |||||    
T  12080678 ttaaa 12080674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 7905345 - 7905278
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||||||||||||   ||||||||||| |||||| |||||||||||||| |||  |||||||||||||    
T  7905345 ttaaatgattaaataatgcaagggtaaattgccaggattaacgattacaaggactaatttttaaatga 7905278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 510
Target Start/End: Original strand, 21627999 - 21628102
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||| || ||||| |||||||| ||| ||||||    
T  21627999 agtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaattt 21628098  T
Q  507 ttaa 510  Q
    ||||    
T  21628099 ttaa 21628102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 30337584 - 30337487
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | |||||||||||| |  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  30337584 tggcagtgattaagtggggagagggacgaaattttaaatgattaaccaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 30337487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 15913872 - 15913948
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||| |||||||  | || ||||||||| |||||||||||||||| |||||  ||||||||||||| || |||||    
T  15913872 ttaaattattaaacaatacaggggtaattttccaagattaacgattatatggacaaatttttaaatgacccttaatt 15913948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 21627815 - 21627739
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||   |||||||| || ||||| | ||||| ||| |||||||||||||||||||| ||||| |||||    
T  21627815 ttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggatcaatttttaaacgatccttaatt 21627739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 30725901 - 30725797
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||| || ||||| ||||||||  || ||||||    
T  30725901 agtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaaacagtgcaagggtaaattggcaggattagcgattacagagaccaattt 30725802  T
Q  507 ttaaa 511  Q
    |||||    
T  30725801 ttaaa 30725797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 33647065 - 33647001
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||||   ||||||||||| ||| |||||||| |||||||| |||||| ||||||||    
T  33647065 ttaaatgattaaataatgcaagggtaaattggcaagattagcgattacagggatcactttttaaa 33647001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 22502876 - 22502809
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  22502876 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacaaggactaatttttaaatga 22502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 22503098 - 22503165
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||| ||| |||||| ||||| |||||||| |||  |||||||||||||    
T  22503098 ttaaatgattaaacaatgcaaggataaattgccaggattagcgattacaaggactaatttttaaatga 22503165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 31407202 - 31407269
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  31407202 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggactaatttttaaatga 31407269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 141066 - 141131
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaat 512  Q
    ||||||||||||  |||||||| ||||||||| | |||||||||||||| | |  |||||||||||    
T  141066 ttaaatgattaatttttgcaagagtaatttgcaaggattaacgattacaggaacaaatttttaaat 141131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 149087 - 149152
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaat 512  Q
    ||||||||||||  |||||||| ||||||||| | |||||||||||||| | |  |||||||||||    
T  149087 ttaaatgattaatttttgcaagagtaatttgcaaggattaacgattacaggaacaaatttttaaat 149152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 3059359 - 3059307
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgga 499  Q
    ||||||||||||||  ||||||||||| |||| | ||||| ||||||||||||    
T  3059359 ttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacatgga 3059307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 11434944 - 11434840
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| |||||||||||||  | |||  || | ||||||||||||   |||||||| || ||||| | ||||| ||| |||||||| ||||||    
T  11434944 agtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaacgattagcgaatacatggaccaattt 11434845  T
Q  507 ttaaa 511  Q
    |||||    
T  11434844 ttaaa 11434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 21836133 - 21836085
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||    
T  21836133 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaca 21836085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 30337744 - 30337820
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||   |||||||| || ||||| | ||||| |||||||| ||| |||||||||||||| || |||||    
T  30337744 ttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaatttttaaatgacccctaatt 30337820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 422 - 523
Target Start/End: Original strand, 18855955 - 18856056
Alignment:
Q  422 attaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataa 521  Q
    ||||| |||||| |||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||    
T  18855955 attaagtgggttaagggacgaaattttaaatgattaaactttgcaagggtaatttgccaagattaacgattacagggaccaatttttaaatgacccctaa 18856054  T
Q  522 tt 523  Q
    ||    
T  18856055 tt 18856056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 5457185 - 5457297
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| |||||||||||| |||||||  || | |||||||||||||| ||| ||||||||||||| | ||||||||| |||| ||    
T  5457185 agctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaacattgaaagggtaatttgcaaggattaacgaatacaagg 5457284  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  5457285 accaatttttaaa 5457297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 30127590 - 30127467
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| |||  |||| || |||| | ||||||| | || ||||    
T  30127590 agctaatcagtgacgtggcactgattaactgggttgagggatcaatttttaagtgattaaaccttgggagggcaaattgcaaggattaacaaatatatgg 30127491  T
Q  499 atcaatttttaaatgatccataatt 523  Q
    | ||||||||||| ||||| |||||    
T  30127490 a-caatttttaaacgatccctaatt 30127467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 17886778 - 17886892
Alignment:
Q  409 tgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    |||| ||||| ||||||| |||||  |||||  || | ||||||||||||  |||||||||||| ||||| | ||||||||| |||||||||||||||||    
T  17886778 tgacgtggcagtgattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggtagtttgcaaggattaacgaatacatggatcaattttt 17886877  T
Q  509 aaatgatccataatt 523  Q
    ||||||||| |||||    
T  17886878 aaatgatccctaatt 17886892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 523
Target Start/End: Complemental strand, 20425607 - 20425504
Alignment:
Q  420 tgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccat 519  Q
    ||||||||| ||||||||||  || | |||| |||||||| ||||  |||||| ||||||||||||| |||||||||| | ||||||||||||||||| |    
T  20425607 tgattaacttggttgagggacgaaattttaagtgattaaattttgagagggtagtttgccaagattatcgattacatgaaccaatttttaaatgatccct 20425508  T
Q  520 aatt 523  Q
    ||||    
T  20425507 aatt 20425504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 523
Target Start/End: Original strand, 22828117 - 22828220
Alignment:
Q  420 tgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccat 519  Q
    ||||||| |||||| || ||| || | ||||||||||||  |||||| |||||||||| ||||||||||||||||| ||| |||||||||||||| || |    
T  22828117 tgattaagtgggttaagtgatgaaattttaaatgattaaggtttgcaggggtaatttgtcaagattaacgattacaaggaccaatttttaaatgacccct 22828216  T
Q  520 aatt 523  Q
    ||||    
T  22828217 aatt 22828220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 23181320 - 23181384
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||||||||| |||||||||||| |||| ||||||    
T  23181320 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggaccaatatttaaa 23181384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 28469334 - 28469398
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||||| ||| |||||||||||    
T  28469334 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggaccaatttttaaa 28469398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 32687499 - 32687423
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||||||| ||||||||| |||||||||||||| ||| ||| |||||||||| || |||||    
T  32687499 ttaaatgattaatatttgcaagggcaatttgccaggattaacgattacagggaccaaattttaaatgacccctaatt 32687423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 507
Target Start/End: Complemental strand, 45010740 - 45010640
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||||||||| ||||||| ||||  || |||  || | ||||||||||||||  |||||| |||| |||||||||||| |||||||| ||||||||||    
T  45010740 agtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaagcgtaaattgccaagattagcgattacaaggatcaattt 45010641  T
Q  507 t 507  Q
    |    
T  45010640 t 45010640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 20567278 - 20567344
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgca 466  Q
    |||||||||||||| ||||||||||||||| |||||| ||| || |||||||||||||||| ||||||    
T  20567278 agctaatcagtgacgtggcactgattaactaggttga-ggaccagttcttaaatgattaaattttgca 20567344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 23058753 - 23058820
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||| ||||||| |||||| |||||||||||||| |||| |||||||||||||    
T  23058753 ttaaatgattaaacaatgcgagggtaaattgccaggattaacgattacaaggattaatttttaaatga 23058820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 43266368 - 43266301
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||||||||||||||||  |||||||||||||    
T  43266368 ttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacatggactaatttttaaatga 43266301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 514
Target Start/End: Original strand, 43124361 - 43124545
Alignment:
Q  330 gggtattttggtcttttcacatttgtctgatgagtccatgggtatttttgtccattcac--gtcattattaagctaatcag-tgacttggcactgattaa 426  Q
    ||||||||| |||||||| ||||   ||||| |||||| |||||||||||||||||| |  |||||| |   ||||||  | |||| ||||| |||||||    
T  43124361 gggtattttagtcttttcgcattgaactgataagtccaggggtatttttgtccattcccatgtcatttt---gctaatttgatgacgtggcagtgattaa 43124457  T
Q  427 ctgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||||   |||||  || | ||||||||||||||  |||||||||| ||||  | ||||| |||||||| ||| ||||||||||||||    
T  43124458 ctgggaatagggacgaaattttaaatgattaaacaatgcaagggtagtttgtaaggattagcgattacagggaccaatttttaaatga 43124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 19204624 - 19204527
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| ||||||  ||||||||||||| ||| |||||||||||    
T  19204624 tggcaatgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgccagaattaacgattacagggaccaatttttaaa 19204527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 28248251 - 28248300
Alignment:
Q  344 tttcacatttgtctgatgagtccatgggtatttttgtccattcacgtcat 393  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  28248251 tttcacatttgtctgatgagtccagaggtatttttgtccattcgcgtcat 28248300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 516
Target Start/End: Original strand, 46205633 - 46205702
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatc 516  Q
    ||||||||||||||  ||||||||||||||| || |||||||||||||| | | |||| |||||||||||    
T  46205633 ttaaatgattaaacaatgcaagggtaatttgtcaggattaacgattacaggaaccaatctttaaatgatc 46205702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 6571115 - 6571051
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| ||| || |||||||||||||| ||| |||||||||||    
T  6571115 ttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacagggaccaatttttaaa 6571051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 10935896 - 10935832
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  10935896 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 10935832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 511
Target Start/End: Complemental strand, 42731561 - 42731457
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| ||||||    
T  42731561 agtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacaaggaccaattt 42731462  T
Q  507 ttaaa 511  Q
    |||||    
T  42731461 ttaaa 42731457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 32068198 - 32068131
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| |||  |||||||||||||    
T  32068198 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggactaatttttaaatga 32068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 32068420 - 32068487
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||| |||||||||||||    
T  32068420 ttaaatgattaaacaatgcaagggtaaattggcaggattagcgattacagggattaatttttaaatga 32068487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 512
Target Start/End: Original strand, 21724407 - 21724523
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagatt---aacgattaca 495  Q
    |||||||||||||| ||||||||||||| ||| ||||||||  |||| |||| |||||||| ||||  |||| || |||| | ||||   ||||| ||||    
T  21724407 agctaatcagtgacgtggcactgattaattggattgagggactaatttttaagtgattaaattttgggagggcaaattgctaggattaacaacgaataca 21724506  T
Q  496 tggatcaatttttaaat 512  Q
    |||| || |||||||||    
T  21724507 tggaccattttttaaat 21724523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 511
Target Start/End: Complemental strand, 42362578 - 42362488
Alignment:
Q  421 gattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||| | |||  || | |||||||||||||   |||||||||||||||| | ||||||||| |||| ||| |||||||||||    
T  42362578 gattaactgggttaaaggacgaaattttaaatgattaaagaatgcaagggtaatttgcaaggattaacgaatacaaggaccaatttttaaa 42362488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 17102155 - 17102058
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| |||||||||||    
T  17102155 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 17102058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 22871570 - 22871679
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatg 513  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||| | ||||| | |||||| ||| |||||||||||||    
T  22871570 tggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagctattacagggaccaatttttaaatg 22871669  T
Q  514 atccataatt 523  Q
    | || |||||    
T  22871670 acccctaatt 22871679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 27991874 - 27991777
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  |||| |||||| |||||| ||||| |||||||| |||||||||| ||||    
T  27991874 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggatcaatttctaaa 27991777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 511
Target Start/End: Original strand, 32299034 - 32299095
Alignment:
Q  450 aatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||||||||  ||||||||||| |||||| ||||| |||||||| ||| |||||||||||    
T  32299034 aatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 32299095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 6253573 - 6253509
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  |||| |||||| |||||| ||||| |||||||| ||| |||||||||||    
T  6253573 ttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 6253509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 13386033 - 13386137
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| |||||||||||||  | |||| || | |||||||||||||| |||||||| || ||||| | ||||| ||| || | ||| ||||||    
T  13386033 agtgacatggcagtgattaactgggtcaaaggataaaattttaaatgattaaacattgcaaggctagtttgcaaggattagcgaatatagggaccaattt 13386132  T
Q  507 ttaaa 511  Q
    |||||    
T  13386133 ttaaa 13386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 18670141 - 18670253
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| | ||||| |||| | ||||| ||| | |||| |||||||||||||  |||| || |||| | ||||||||| |||| ||    
T  18670141 agctaatcagtgacgtggcagtaattaaatgggcttagggaccaaattttaagtgattaaactttgggagggcaaattgcaaggattaacgaatacaggg 18670240  T
Q  499 atcaatttttaaa 511  Q
    | || ||||||||    
T  18670241 accattttttaaa 18670253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 20426608 - 20426720
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||| ||||| ||||| || || | |||| |||||||  || | ||||||||||||||||||  |||||||  ||||| ||||| ||| |||| ||    
T  20426608 agctaatcggtgacgtggcagtggtttagtgggatgagggactaaattttaaatgattaaactttgtgagggtaaaatgccaggattagcgaatacaggg 20426707  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  20426708 accaatttttaaa 20426720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 25628802 - 25628878
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||  ||||||||||| ||| || ||||| ||||||||| ||  |||||||||||||  |||||||    
T  25628802 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatagactaatttttaaatgacgcataatt 25628878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 30128625 - 30128737
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| | ||||| |||| | ||||||||| | |||| |||||||||||||  ||||||| |||| |  |||||||| || | ||    
T  30128625 agctaatcagtgacgtggcagtaattaaatgggctcagggatcaaattttaagtgattaaactttgggagggtaaattgcaagaattaacgaatataggg 30128724  T
Q  499 atcaatttttaaa 511  Q
    | || ||||||||    
T  30128725 accattttttaaa 30128737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 32688544 - 32688620
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||  |||||||||| |||||| || ||||| |||||||| ||| ||| |||||||||| || |||||    
T  32688544 ttaaatgattaatatttgcaagggcaatttgtcaggattagcgattacaaggaccaaattttaaatgacccctaatt 32688620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 511
Target Start/End: Complemental strand, 43123325 - 43123213
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||| ||||| | ||||| |||| | |||||  |||| ||||||||||| ||||||  |||||| ||||| | |||||  || |||| ||    
T  43123325 agctaatcagtgacgtggcagtcattaattgggctcagggactaatttttaaatgattatactttgagagggtagtttgcaaggattagtgaatacaggg 43123226  T
Q  499 atcaatttttaaa 511  Q
    | |||||||||||    
T  43123225 accaatttttaaa 43123213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 25628580 - 25628513
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||  ||  |||||||||||||    
T  25628580 ttaaatgattaaacaatgcaagggtaaattgccaggattatcgattacaatgactaatttttaaatga 25628513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 27138265 - 27138332
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  27138265 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacaaggactaatttttaaatga 27138332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 28890681 - 28890614
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||| | ||||| |||||||| |||  |||||||||||||    
T  28890681 ttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacaaggactaatttttaaatga 28890614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 42618235 - 42618302
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||| |||||||| | |  |||||||||||||    
T  42618235 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaggaactaatttttaaatga 42618302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 43266590 - 43266657
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| ||  |||| ||||||||||||  |||||||||||||    
T  43266590 ttaaatgattaaacaatgcaagggtaaattgtcagaattagcgattacatggactaatttttaaatga 43266657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 523
Target Start/End: Complemental strand, 6764268 - 6764206
Alignment:
Q  461 tttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    ||||||||||||||||| ||| ||||| ||||||| | | |||||||||||||| || |||||    
T  6764268 tttgcaagggtaatttgtcaaaattaatgattacaggaaccaatttttaaatgacccctaatt 6764206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 42363719 - 42363775
Alignment:
Q  454 attaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    |||||| ||||||||| |||||||| ||||||||||| |||| ||| |||||||||||    
T  42363719 attaaaatttgcaaggataatttgcaaagattaacgaataca-ggaccaatttttaaa 42363775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 48789116 - 48789177
Alignment:
Q  434 gagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    ||||||| || | ||||||||||||||  ||||||||||| ||||||  |||||||||||||    
T  48789116 gagggatgaaattttaaatgattaaacaatgcaagggtaaattgccagaattaacgattaca 48789177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 10600276 - 10600340
Alignment:
Q  450 aatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    |||||||||||  ||||||||||| ||| || ||||| |||||||| |||  |||||||||||||    
T  10600276 aatgattaaacaatgcaagggtaaattgtcaggattagcgattacaaggactaatttttaaatga 10600340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 16803971 - 16804035
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||| | ||||  |||||||| ||| |||||||||||    
T  16803971 ttaaatgattaaacaatgcaagggtaaattgctaggattggcgattacagggaccaatttttaaa 16804035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 22081883 - 22081931
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||    
T  22081883 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaca 22081931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 45010930 - 45010994
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaa 511  Q
    ||||||||||||||  ||||||||||| |||| | ||||| ||| |||||| | |||||||||||    
T  45010930 ttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatacatgaaccaatttttaaa 45010994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 399 - 514
Target Start/End: Original strand, 239829 - 239944
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatgg 498  Q
    |||||||||||||  ||||| | ||||| |||||  |||||  || | |||||||||||||||||| ||||||||||||||| ||||| |||||||| |     
T  239829 agctaatcagtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaaactttggaagggtaatttgccaggattatcgattacagga 239928  T
Q  499 atcaatttttaaatga 514  Q
    | ||||||||||||||    
T  239929 accaatttttaaatga 239944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 515
Target Start/End: Complemental strand, 1022 - 954
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgat 515  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  1022 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggactaatttttaaatgat 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 11464 - 11531
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| ||||||||||||||||||  |||||||||||||    
T  11464 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacatggactaatttttaaatga 11531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 491
Target Start/End: Complemental strand, 11242 - 11198
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgat 491  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||||    
T  11242 ttaaatgattaaacaatgcaagggtaaattgccaagattagcgat 11198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 523
Target Start/End: Complemental strand, 69107 - 68991
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||| |||||  ||||||| ||| ||||||    
T  69107 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtgattacagggaccaattt 69008  T
Q  507 ttaaatgatccataatt 523  Q
    |||||||| || |||||    
T  69007 ttaaatgacccctaatt 68991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 12563 - 12630
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||||| |||  |||||||||||||    
T  12563 ttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggactaatttttaaatga 12630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 31774 - 31676
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatg 497  Q
    |||||||||||||| ||||| ||||||||||||||||| || ||||| |||| |||||||| ||||  |||| || |||  | ||||||||| ||||||    
T  31774 agctaatcagtgacgtggcattgattaactgggttgagagaccaatttttaagtgattaaattttgggagggcaaattgtaaggattaacgaatacatg 31676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 512
Target Start/End: Original strand, 33045 - 33161
Alignment:
Q  399 agctaatcagtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagatt---aacgattaca 495  Q
    |||||||||||||| ||||||||||||| ||| ||||||||  |||| |||| |||||||| ||||  |||| || |||| | ||||   ||||| ||||    
T  33045 agctaatcagtgacgtggcactgattaattggattgagggactaatttttaagtgattaaattttgggagggcaaattgctaggattaacaacgaataca 33144  T
Q  496 tggatcaatttttaaat 512  Q
    |||| || |||||||||    
T  33145 tggaccattttttaaat 33161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 414 - 508
Target Start/End: Complemental strand, 1904 - 1810
Alignment:
Q  414 tggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattttt 508  Q
    ||||| ||||||| ||||  ||||||  || | ||||||||||||||  ||||||||||| |||||||||||| |||||||| ||| ||||||||    
T  1904 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacagggaccaattttt 1810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 6304 - 6380
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||| ||||||||||||||||| | ||||| |||||| | ||| |||||||||| ||| || |||||    
T  6304 ttaaatgattaaacattgcaagggtaatttgcaaggattatcgattataaggaccaatttttaagtgacccctaatt 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 2495 - 2428
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||| | ||||| |||||||| |||| |||||||||||||    
T  2495 ttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacagggattaatttttaaatga 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 12104 - 12171
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| |||| | ||||| |||||||  |||| |||||||||||||    
T  12104 ttaaatgattaaacaatgcaagggtaaattgctaggattagcgattactgggattaatttttaaatga 12171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 222113 - 222180
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatga 514  Q
    ||||||||||||||  ||||||||||| ||| || ||||| |||||||||| |  |||||||||||||    
T  222113 ttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgtactaatttttaaatga 222180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 221892 - 221844
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattaca 495  Q
    ||||||||||||||  ||||||||||| |||||| ||||| ||||||||    
T  221892 ttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaca 221844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 19959 - 19883
Alignment:
Q  447 ttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaatttttaaatgatccataatt 523  Q
    |||||||||||||   ||||| |||||||||| | ||||| |||| ||| ||| ||||||||||| || ||||||||    
T  19959 ttaaatgattaaagaatgcaaaggtaatttgcaaggattagcgatcacagggaccaatttttaaacgacccataatt 19883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 37849 - 37953
Alignment:
Q  407 agtgacttggcactgattaactgggttgagggatcaattcttaaatgattaaactttgcaagggtaatttgccaagattaacgattacatggatcaattt 506  Q
    |||||| ||||| ||||||| ||||  ||||||  || | ||||||||||||||  | ||||||||| ||| || ||||| ||||||||  || ||||||    
T  37849 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcgattacaaagaccaattt 37948  T
Q  507 ttaaa 511  Q
    |||||    
T  37949 ttaaa 37953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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