View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9022_low_8 (Length: 461)
Name: NF9022_low_8
Description: NF9022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9022_low_8 |
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| [»] scaffold0082 (1 HSPs) |
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Alignment Details
Target: scaffold0082 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0082
Description:
Target: scaffold0082; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 48563 - 48681
Alignment:
| Q |
322 |
ccctacttcaatggaaagggg-gaatcgccgtttcacagccgctcctctacaactaactacctttcgtccaacatgatcacaaatgaagacagagaattg |
420 |
Q |
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| T |
48563 |
ccctacttcaatggaaaggggggaatcgccgtttcacagccgctcctctacaactaactacctttcgcccaacatgatcacgaacgaagacagagaattg |
48662 |
T |
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| Q |
421 |
cgtagatagaaggacgaaa |
439 |
Q |
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| T |
48663 |
cgtagatagaaggacgaaa |
48681 |
T |
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