View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9023_high_19 (Length: 223)
Name: NF9023_high_19
Description: NF9023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9023_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 40336872 - 40336651
Alignment:
| Q |
1 |
tggtataacactgtcttatttgtgcattataaaattagcctatatttatagtattgtttttgttgaatcaatatcgttgaagttgatatataagtcaaga |
100 |
Q |
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| T |
40336872 |
tggtataacactgtcttatttgtgcattataaaattagcctatatttatagtattgtttttgttgaatcaatatcgttcaagttgatatataagtcaaga |
40336773 |
T |
|
| Q |
101 |
ttatacataaaggtaatgacgtcattgtcatatatatttgagcaatttccaaacattggtggtagagaaattgtgaccatgccttagcaatgttgtctta |
200 |
Q |
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|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |
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| T |
40336772 |
ttatacataaaggtaatggcgtcattgtcgtatatatttgagcaatttccaaacattggtggtagagaaattgtgactatgccttaccaatgttttctta |
40336673 |
T |
|
| Q |
201 |
caaggtgcttttgagacgtcta |
222 |
Q |
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||| |||||||| ||| ||||| |
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| T |
40336672 |
caaagtgctttttagatgtcta |
40336651 |
T |
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