View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9023_high_22 (Length: 202)
Name: NF9023_high_22
Description: NF9023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9023_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 33557132 - 33556935
Alignment:
| Q |
1 |
ggcaaaatctgaaatttcagcttcaattgatttaattatagaaataatttgagcagaagtaatgtaaaagaagttggataaaatatagaaacgtgaaatc |
100 |
Q |
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| T |
33557132 |
ggcaaaatctgaaatttcagcttcaattgatttaattatagaaataatttgagcagaagtaatgtaaaagaagttggataaaatatagaaacgtgaaatc |
33557033 |
T |
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| Q |
101 |
ttggatgtcttcaattgtagataatgaaatatttgaattttctttcattgcaattcagtacataatctgtattagtagctttggtgttgtaatttgtt |
198 |
Q |
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| T |
33557032 |
ttggatgtcttcaatcgtagataatgaaatatttgaattttctttcattgcaattcagtacataatctgtattagtagctttggtgttgtaatttgtt |
33556935 |
T |
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