View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9023_low_29 (Length: 268)
Name: NF9023_low_29
Description: NF9023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9023_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 40336490 - 40336241
Alignment:
| Q |
2 |
tattgttctaataactaacggcatttatgcgttaagagctctaaataacttgattaaattgaacacctctttacattgtttcgagtgaagctaaatttag |
101 |
Q |
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| T |
40336490 |
tattgttctaataactattggcatttatgcgttaagagctctaaataacttgattaaattgaacacctctttacattgtttcgagtgaagctaaatttag |
40336391 |
T |
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| Q |
102 |
atctcttaagtaaaaaatttgggtttgagtcgtatgaatggaaaaaatgtgattgaaaagagaaacctcactaactgtgataaaatatgttctttgacga |
201 |
Q |
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| T |
40336390 |
atctcttaagtaaaaa-tttgagtttgagtcctatgaatggaaaaaatgtgattggaaagagaaacctcactaaccgtgataaaatatgttctttgacga |
40336292 |
T |
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| Q |
202 |
agattagttaacaaaaagttgataaatactgtatgcaaataacatggttag |
252 |
Q |
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| T |
40336291 |
agattagttaacaaaaagttgataaatactgaatgcaaataacatggttag |
40336241 |
T |
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