View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9023_low_36 (Length: 253)

Name: NF9023_low_36
Description: NF9023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9023_low_36
NF9023_low_36
[»] chr3 (12 HSPs)
chr3 (101-253)||(47746465-47746617)
chr3 (1-100)||(43306912-43307011)
chr3 (1-100)||(43304198-43304297)
chr3 (1-100)||(53012778-53012875)
chr3 (1-92)||(3069115-3069206)
chr3 (1-100)||(3063977-3064078)
chr3 (103-253)||(43858381-43858531)
chr3 (56-100)||(365846-365890)
chr3 (12-58)||(19795060-19795106)
chr3 (56-89)||(2472952-2472985)
chr3 (1-58)||(45168533-45168590)
chr3 (177-253)||(3159777-3159853)
[»] chr2 (15 HSPs)
chr2 (1-100)||(31636085-31636184)
chr2 (1-100)||(27956401-27956500)
chr2 (1-100)||(27952565-27952664)
chr2 (1-106)||(15129162-15129267)
chr2 (1-100)||(22011182-22011281)
chr2 (1-100)||(33655376-33655475)
chr2 (1-70)||(31633884-31633953)
chr2 (1-101)||(22264185-22264284)
chr2 (1-100)||(35682004-35682102)
chr2 (1-100)||(2155718-2155816)
chr2 (1-100)||(2165674-2165772)
chr2 (69-101)||(31633556-31633588)
chr2 (55-100)||(1517980-1518026)
chr2 (191-253)||(40368565-40368627)
chr2 (1-38)||(8781323-8781360)
[»] chr7 (16 HSPs)
chr7 (1-100)||(859396-859495)
chr7 (1-100)||(1217400-1217499)
chr7 (1-100)||(1220673-1220772)
chr7 (1-100)||(4300306-4300405)
chr7 (1-100)||(13886427-13886526)
chr7 (1-100)||(13882925-13883022)
chr7 (51-100)||(4303207-4303256)
chr7 (103-253)||(1718110-1718260)
chr7 (56-100)||(1883290-1883334)
chr7 (191-253)||(13808115-13808177)
chr7 (55-100)||(4888947-4888992)
chr7 (63-100)||(29175573-29175610)
chr7 (56-94)||(1874345-1874382)
chr7 (63-101)||(3778977-3779015)
chr7 (56-100)||(13466547-13466590)
chr7 (56-92)||(30217616-30217652)
[»] chr1 (11 HSPs)
chr1 (1-100)||(50857684-50857783)
chr1 (1-100)||(13444225-13444324)
chr1 (33-100)||(13441861-13441928)
chr1 (101-253)||(48242051-48242203)
chr1 (177-253)||(14207153-14207229)
chr1 (56-100)||(43681248-43681292)
chr1 (56-92)||(31915346-31915382)
chr1 (1-58)||(8931016-8931073)
chr1 (1-38)||(42071561-42071598)
chr1 (56-100)||(31913189-31913233)
chr1 (33-98)||(23989025-23989090)
[»] chr8 (11 HSPs)
chr8 (1-94)||(42891911-42892004)
chr8 (1-100)||(22512288-22512387)
chr8 (1-100)||(23570338-23570436)
chr8 (1-82)||(23573351-23573432)
chr8 (1-94)||(37189623-37189715)
chr8 (1-100)||(18468467-18468565)
chr8 (1-75)||(6845112-6845186)
chr8 (1-100)||(22922091-22922189)
chr8 (1-100)||(18180928-18181026)
chr8 (55-100)||(24730821-24730866)
chr8 (14-75)||(42890182-42890243)
[»] chr4 (10 HSPs)
chr4 (1-94)||(22691063-22691156)
chr4 (1-88)||(22716424-22716511)
chr4 (1-88)||(22988706-22988793)
chr4 (1-100)||(6659570-6659668)
chr4 (99-234)||(53480884-53481019)
chr4 (1-101)||(24667430-24667536)
chr4 (1-100)||(13085332-13085433)
chr4 (1-87)||(19935271-19935356)
chr4 (194-252)||(11581422-11581480)
chr4 (201-253)||(41147753-41147805)
[»] chr6 (13 HSPs)
chr6 (12-100)||(29341043-29341131)
chr6 (1-100)||(11194416-11194514)
chr6 (15-100)||(18203234-18203318)
chr6 (8-100)||(18726883-18726974)
chr6 (1-100)||(30049667-30049764)
chr6 (1-100)||(30051954-30052051)
chr6 (177-253)||(18780858-18780934)
chr6 (1-98)||(11190252-11190348)
chr6 (59-100)||(22910596-22910637)
chr6 (1-100)||(3535786-3535884)
chr6 (1-100)||(3541997-3542095)
chr6 (63-100)||(22889053-22889090)
chr6 (56-92)||(8050125-8050161)
[»] chr5 (7 HSPs)
chr5 (1-97)||(40779027-40779122)
chr5 (1-92)||(21845130-21845221)
chr5 (1-92)||(21849211-21849302)
chr5 (1-92)||(21857125-21857216)
chr5 (1-101)||(19501190-19501289)
chr5 (63-100)||(8456646-8456683)
chr5 (63-100)||(26140144-26140181)
[»] scaffold0011 (1 HSPs)
scaffold0011 (101-251)||(217991-218141)
[»] scaffold0110 (2 HSPs)
scaffold0110 (15-100)||(45871-45955)
scaffold0110 (1-58)||(46945-47002)
[»] scaffold0054 (1 HSPs)
scaffold0054 (59-100)||(10449-10490)


Alignment Details
Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 101 - 253
Target Start/End: Complemental strand, 47746617 - 47746465
Alignment:
Q  101 tcttgtgtgtttgggtgtggttccattgagtcggcggagcatctatttcttcattgtaccatggccggcaacctacgggctcttgtctgcaattggttag 200  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||    
T  47746617 tcttgtgtgtttgggtgtggttccagtgagtcggcgcatcatctatttctacattgtactatggccggcaacctatggactcttgtctgcaattggttag 47746518  T
Q  201 gtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||| || |||||||||||| ||||||||||| |||| |||||||||||||    
T  47746517 gtatttgttttgtgcatgctggtgaacttcgacaacactgtattcagttcact 47746465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43306912 - 43307011
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  43306912 ataaaataaaacgaaataataatagaatgttctagaaaattactaagatttggttaaataataaatactactaaattactaataaaaccctcctgcatca 43307011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43304198 - 43304297
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  43304198 ataaaataaaacgaaatactaatagaaagttatagaaaattactaagatttggctaaataataaatgctactaaattactaataaaaccctcctgcatca 43304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 53012875 - 53012778
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||  |||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53012875 ataaaataaaacataataataataga--gttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctgcatca 53012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3069115 - 3069206
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctc 92  Q
    ||||||||||||| ||||||||||   ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3069115 ataaaataaaacgtaataataatagtgagttctagagaattacaaagatttggctaaataataaatactactaaattactaataaaaccctc 3069206  T

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Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3063977 - 3064078
Alignment:
Q  1 ataaaataaaacgaaata--ataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacat 98  Q
    ||||||||||||| ||||  ||||||   ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  3063977 ataaaataaaacgtaatataataataacgagttctagagaattactaagatttggctaaataataaatactactaaattactaacaaaaccctcctgcat 3064076  T
Q  99 ca 100  Q
    ||    
T  3064077 ca 3064078  T

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Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 253
Target Start/End: Complemental strand, 43858531 - 43858381
Alignment:
Q  103 ttgtgtgtttgggtgtggttccattgagtcggcggagcatctatttcttcattgtaccatggccggcaacctacgggctcttgtctgcaattggttaggt 202  Q
    ||||||||||||||||| ||| |  ||||||||||||||||| |||||||||||| | ||||| ||  |  |  ||||||||||  |||||||||| |||    
T  43858531 ttgtgtgtttgggtgtgattcaacagagtcggcggagcatctttttcttcattgttcaatggctggttatttgtgggctcttgtaagcaattggttgggt 43858432  T
Q  203 atttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||||  ||  | ||||| |||||||||||||||| | | |||||||||    
T  43858431 atttctttcgtatacgctggtgaacttcgacatcactgtctccagttcact 43858381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 365846 - 365890
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  365846 aaataataaatactactaaattactaataaaatcctcctgcatca 365890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 19795106 - 19795060
Alignment:
Q  12 cgaaataataatataaagttctagaaaattactatgatttggctaaa 58  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  19795106 cgaaataataatagaaagttctagaaaattactaagatttagctaaa 19795060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 2472952 - 2472985
Alignment:
Q  56 aaataataaatactactaaattactaataaaacc 89  Q
    ||||||||||||||||||||||||||||||||||    
T  2472952 aaataataaatactactaaattactaataaaacc 2472985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45168533 - 45168590
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaa 58  Q
    |||||||||||||||||||||||| || ||| |||||||||||||  ||||| |||||    
T  45168533 ataaaataaaacgaaataataatagaaggttttagaaaattactaaaatttgcctaaa 45168590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 3159853 - 3159777
Alignment:
Q  177 gggctcttgtctgcaattggttaggtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||||||| || |||||||| || || |||| |||||||||||| || ||||||||||| |||| ||| ||||||    
T  3159853 gggctcttgtttggaattggttgggcatctcttttgtgcatgctggtgagcttcgacatcattttactcatttcact 3159777  T

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Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31636184 - 31636085
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31636184 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctacatca 31636085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27956401 - 27956500
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27956401 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggataaataataaatactactaaattactaataaaaccctcctacatca 27956500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27952565 - 27952664
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  27952565 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggataaataataaatactactaaattattaataaaaccctcctacatca 27952664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15129267 - 15129162
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  15129267 ataaaataaaacgaaataataataggaagttctagaaaattactaagatttggttaaataataaatactactaaattattaataaaaccctcctgcatca 15129168  T
Q  101 tcttgt 106  Q
    | ||||    
T  15129167 tattgt 15129162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22011281 - 22011182
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||| |||||    
T  22011281 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattaaagataaaaccctcctgcatca 22011182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33655475 - 33655376
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  33655475 ataaaataaaacaaaataataatagaaagttctagaaaattactaagatttggctaaataatagatactactaaattaccaataaaaccctcctgcatca 33655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31633953 - 31633884
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatacta 70  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  31633953 ataaaataaaatgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatacta 31633884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22264284 - 22264185
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||| |  |||||||||||||||||||| |||| ||| || |||||    
T  22264284 ataaaacaaaacaaaataataatagaaagttctagaaaattactaagatttggctaaa-ataaaatactactaaattactaagaaaatccttctgcatca 22264186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35682102 - 35682004
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| |||||||||||| |||| |||||||||||||||||||| |||||||||||| |  ||||||||  |||||||||| ||||||||||| |||||    
T  35682102 ataaaacaaaacgaaataacaatagaaagttctagaaaattactaagatttggctaaa-ataaaatactataaaattactaagaaaaccctcctgcatca 35682004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2155816 - 2155718
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| |||| |||||| ||||| |  ||||||||  ||||||||||  ||||||||||||||||    
T  2155816 ataaaacaaaacaaaataataatagaaagttctagaaaatcactaagatttgactaaa-ataaaatactataaaattactaaggaaaccctcctacatca 2155718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2165772 - 2165674
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||| ||||| |||| |||||| ||||| |  ||||||||  ||||||||||  |||| |||||||||||    
T  2165772 ataaaacaaaacaaaataataatacaaagttctaaaaaatcactaagatttgactaaa-ataaaatactataaaattactaaggaaactctcctacatca 2165674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 31633588 - 31633556
Alignment:
Q  69 tactaaattactaataaaaccctcctacatcat 101  Q
    |||||||||||||||||||||||||||||||||    
T  31633588 tactaaattactaataaaaccctcctacatcat 31633556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 1518026 - 1517980
Alignment:
Q  55 taaataataaa-tactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  1518026 taaataataaaatactactaaattactaagaaaaccctcctgcatca 1517980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 40368627 - 40368565
Alignment:
Q  191 aattggttaggtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    ||||||||||| ||||| | ||||| || ||| || ||||||||||||||| |||||||||||    
T  40368627 aattggttaggcatttcgtttgtgcttgatggtgagcttcgacatcactttcttcagttcact 40368565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8781360 - 8781323
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaa 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  8781360 ataaaacaaaacgaaataataatagaaagttctagaaa 8781323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 859396 - 859495
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  859396 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 859495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1217400 - 1217499
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1217400 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactgaattactaataaaaccctcctgcatca 1217499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1220673 - 1220772
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1220673 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 1220772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4300405 - 4300306
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||| |||||||||| | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4300405 ataaaataaaacgtaataataatagagagttttagaaaattactatgttttggctaaataataaatactactaaattactaataaaaccctcctacatca 4300306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13886427 - 13886526
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||| |||||||||| | |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  13886427 ataaaataaaacgtaataataatagagagttctagaaaattactaagatttgactaaataataaatactactaaattactaataaaacccttctgcatca 13886526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13882925 - 13883022
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||| |||||||||| |  ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13882925 ataaaataaaacgtaataataataga--gttctagaaaattactaagatttgactaaataataaatactactaaattactaataaaaccctcctgcatca 13883022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 4303256 - 4303207
Alignment:
Q  51 tggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4303256 tggctaaataataaatactactaaattactaataaaaccctcctacatca 4303207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 1718110 - 1718260
Alignment:
Q  103 ttgtgtgtttgggtgtggttccattgagtcggcggagcatctatttcttcattgtaccatggccggcaacctacgggctcttgtctgcaattggttaggt 202  Q
    ||||||||||||||||| | | |  ||||| ||||||||||| |||||||||||| | ||||| ||  |  |  ||||||||||  ||||||||||||||    
T  1718110 ttgtgtgtttgggtgtgatacaacagagtcagcggagcatctttttcttcattgttcaatggctggttatttgtgggctcttgtaagcaattggttaggt 1718209  T
Q  203 atttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||||  ||   |||||| |||||||||||||||| | | |||||||||    
T  1718210 atttctttcgtatttgctggtgaacttcgacatcactgtctccagttcact 1718260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 1883334 - 1883290
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  1883334 aaataataaatactactaagttactaataaaaccctcctacatca 1883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 13808177 - 13808115
Alignment:
Q  191 aattggttaggtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||||||| ||| |||||||||||| |||| || ||| ||||||| |||||||||||||||    
T  13808177 aattggttagatatctcttatgtgcattctggtgagcttggacatcattttattcagttcact 13808115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 4888947 - 4888992
Alignment:
Q  55 taaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||    
T  4888947 taaataataaatactactaaattactaataaaattctcctgcatca 4888992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 29175610 - 29175573
Alignment:
Q  63 aaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||||||||||| |||||    
T  29175610 aaatactactaaattactaataaaaccctcctgcatca 29175573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1874382 - 1874345
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctcct 94  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  1874382 aaataataaatactactaaattactaa-aaaaccctcct 1874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 3778977 - 3779015
Alignment:
Q  63 aaatactactaaattactaataaaaccctcctacatcat 101  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  3778977 aaatactactaaattactaagaaaatcctcctacatcat 3779015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 13466590 - 13466547
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  13466590 aaataataaatacaactaaattact-ataaaaccctcctgcatca 13466547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 30217652 - 30217616
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctc 92  Q
    ||||||||||||||||||||||| | |||||||||||    
T  30217652 aaataataaatactactaaattagttataaaaccctc 30217616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50857684 - 50857783
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50857684 ataaaacaaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctgcatca 50857783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13444225 - 13444324
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13444225 ataaaataaaacgaaataataatagaaaattcttgaaaattactaaaatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 13444324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 13441861 - 13441928
Alignment:
Q  33 tagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  13441861 tagaaaattactatgatttggctaaataataaatactactaaattactaacaaaacccttctgcatca 13441928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 253
Target Start/End: Original strand, 48242051 - 48242203
Alignment:
Q  101 tcttgtgtgtttgggtgtggttccattgagtcggcggagcatctatttcttcattgtaccatggccggcaacctacgggctcttgtctgcaattggttag 200  Q
    ||||||||||||||||||| |||  | ||||||||||||| ||| ||||| |||||| | ||||| || |   |  ||||||||||  ||||||||||||    
T  48242051 tcttgtgtgtttgggtgtgattcactagagtcggcggagcgtctttttctgcattgttctatggctggtattttgtgggctcttgtaagcaattggttag 48242150  T
Q  201 gtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    ||||||||| |||| ||||||| ||| ||||||| |||| | |||||||||||    
T  48242151 gtatttcttttgtgtatgctggtgaaattcgacaacactgttttcagttcact 48242203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 14207153 - 14207229
Alignment:
Q  177 gggctcttgtctgcaattggttaggtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||||||| || ||||||||||| || |||| ||||||| |||| || ||||||||||| |||||||||||||||    
T  14207153 gggctcttgtttggaattggttaggcatctcttttgtgcatactggtgagcttcgacatcattttattcagttcact 14207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 43681292 - 43681248
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  43681292 aaataataaatactactaaattactaataaaaccatcctacatca 43681248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 31915382 - 31915346
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctc 92  Q
    |||||||||||||||||||||||||||||||||||||    
T  31915382 aaataataaatactactaaattactaataaaaccctc 31915346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8931073 - 8931016
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaa 58  Q
    |||||| ||||| ||||||||||| ||||||||||||||| |||| |||||| |||||    
T  8931073 ataaaacaaaacaaaataataatagaaagttctagaaaatcactaagatttgactaaa 8931016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42071561 - 42071598
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42071561 ataaaataaaacgaaataataatagaaagttctagaaa 42071598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 31913233 - 31913189
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||    
T  31913233 aaatactaaatactactaaattactaataaaacccttcaacatca 31913189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 23989090 - 23989025
Alignment:
Q  33 tagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacat 98  Q
    |||||||||||||  |||||||||||  | ||||||||  ||||||||||  ||||||||||||||    
T  23989090 tagaaaattactaaaatttggctaaaataaaaatactatgaaattactaaggaaaccctcctacat 23989025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 42891911 - 42892004
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcct 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42891911 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggttaaataataaatactactaaattactaataaaaccctcct 42892004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22512288 - 22512387
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  22512288 ataaaatgaaacgaaataataatataaagttctagaaaattactaagatttagctaaataataaatactactaaattactaataaaactctcctgcatca 22512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23570436 - 23570338
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||  ||||||||||||||||  ||||||||||  ||||||||||||||||    
T  23570436 ataaaataaaacgaaataaaaatagaaagttctagaaaattactaagatttgattaaataataaatactataaaattactaa-gaaaccctcctacatca 23570338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23573432 - 23573351
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaa 82  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||    
T  23573432 ataaaataaaacgaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaa 23573351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37189715 - 37189623
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcct 94  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||| |  |||||||||||||||||||| ||||| |||||    
T  37189715 ataaaataaaacaaaataataatataaagttctaaaaagttactaagatttggctaaa-ataaaatactactaaattactaagaaaactctcct 37189623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18468565 - 18468467
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||| |  ||||||||  ||||||||||  || |||||||||||||    
T  18468565 ataaaacaaaacgaaataataatagaaagttctagaaaattactaagatttggttaaa-ataaaatactataaaattactaaggaagccctcctacatca 18468467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6845186 - 6845112
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaa 75  Q
    ||||||| ||||| |||||||||| | |||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  6845186 ataaaatcaaacgtaataataatagagagttttagaaaattactaagatttgactaaataataaatactaataaa 6845112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22922091 - 22922189
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| |||| |||||| ||||| |  ||||||||  ||||||||||  || |||||||||||||    
T  22922091 ataaaacaaaacaaaataataatagaaagttctagaaaatcactaagatttgactaaa-ataaaatactataaaattactaaggaagccctcctacatca 22922189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 18180928 - 18181026
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttg-gctaaataataaatactactaaattactaataaaaccctcctacatc 99  Q
    |||||| |||||||||||| |||| ||| ||||| ||||||| || |||||| | |||||||  ||||||||||||||||||| |||||  |||||||||    
T  18180928 ataaaacaaaacgaaataagaatagaaatttctaaaaaattattaagatttgagttaaataa--aatactactaaattactaagaaaactgtcctacatc 18181025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 24730866 - 24730821
Alignment:
Q  55 taaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||    
T  24730866 taaatcataaatactactaaattactaataaaaccctcctgcatca 24730821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 42890243 - 42890182
Alignment:
Q  14 aaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaa 75  Q
    ||||||||||| |||||||||||||||||||   |||||||||||||||| |||||| ||||    
T  42890243 aaataataatagaaagttctagaaaattacttccatttggctaaataatagatactaataaa 42890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22691156 - 22691063
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcct 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  22691156 ataaaataaaacgaaataataatacaaagttctagaaaattactaagatttggctaaataataaatactactaaattattaataaaaccctcct 22691063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22716511 - 22716424
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaac 88  Q
    ||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||    
T  22716511 ataaaataaaaagaaataataatagaaagttctagaaaattattaagatttggctaaataataaatactattaaattactaataaaac 22716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22988706 - 22988793
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaac 88  Q
    ||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||    
T  22988706 ataaaataaaaagaaataataatagaaagttctagaaaattattaagatttggctaaataataaatactattaaattactaataaaac 22988793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6659570 - 6659668
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||   ||||||||||  ||||||||||||||||    
T  6659570 ataaaataaaacaaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactgtaaaattactaa-gaaaccctcctacatca 6659668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 234
Target Start/End: Complemental strand, 53481019 - 53480884
Alignment:
Q  99 catcttgtgtgtttgggtgtggttccattgagtcggcggagcatctatttcttcattgtaccatggccggcaacctacgggctcttgtctgcaattggtt 198  Q
    |||||| |||||||||||||| ||| |  ||||||||||||||||| |||||||||||| | ||||| ||  | ||  |||||||| |  ||||||||||    
T  53481019 catcttatgtgtttgggtgtgattcaagagagtcggcggagcatctttttcttcattgttctatggctggttatctgtgggctcttataagcaattggtt 53480920  T
Q  199 aggtatttcttatgtgcatgctggcgaacttcgaca 234  Q
    |||||||||||  ||||||||||| |||||||||||    
T  53480919 aggtatttctttcgtgcatgctggtgaacttcgaca 53480884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24667536 - 24667430
Alignment:
Q  1 ataaaataaaacgaaataataatataaagtt------ctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcct 94  Q
    ||||||||||| |||||||||||| |||| |      ||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  24667536 ataaaataaaatgaaataataatagaaagatgaattactaaaaaattactacgatttggctaaataataactactactaaattaataataaagccctcct 24667437  T
Q  95 acatcat 101  Q
     ||||||    
T  24667436 gcatcat 24667430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13085332 - 13085433
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaa---accctcctaca 97  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||| ||| |||||||| |  ||||||||  |||||||||| |||   |||||||||||    
T  13085332 ataaaacaaaacgaaataataatagaaagttctagaatattactaagatgtggctaaa-ataaaatactataaaattactaaaaaaaacaccctcctaca 13085430  T
Q  98 tca 100  Q
    |||    
T  13085431 tca 13085433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19935356 - 19935271
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaa 87  Q
    |||||| ||||||||||||||||| ||||||||  ||||| | || |||||| ||||| |  |||||||||||||||||||| ||||    
T  19935356 ataaaacaaaacgaaataataatagaaagttctgaaaaatgattaagatttgactaaa-ataaaatactactaaattactaagaaaa 19935271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 11581480 - 11581422
Alignment:
Q  194 tggttaggtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcac 252  Q
    ||||||||||||| || ||||||| |||| || || ||||||||||||| |||||||||    
T  11581480 tggttaggtatttattttgtgcattctggtgagctccgacatcactttaatcagttcac 11581422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 41147753 - 41147805
Alignment:
Q  201 gtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||| || ||||||| |||| |||||||||||||| |||| ||||||||||    
T  41147753 gtatttattttgtgcattctggtgaacttcgacatcaatttactcagttcact 41147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 29341043 - 29341131
Alignment:
Q  12 cgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29341043 cgaaataataatagaaagttttagaaaattactaagatttggctaaaaaataaatactactaaattactaataaaaccctcctacatca 29341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11194514 - 11194416
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| |||||||| || |||||||||||||||||||| |||||||||||| |  |||||||||||||||||||| ||||| |||||||||||    
T  11194514 ataaaacaaaacaaaataatactagaaagttctagaaaattactaagatttggctaaa-ataaaatactactaaattactaagaaaactctcctacatca 11194416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 18203318 - 18203234
Alignment:
Q  15 aataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||| | |||||||||||||||||| |||||| |||||||||||||||||  |||||||| |  ||||||||||||||||    
T  18203318 aataataatagagagttctagaaaattactaagatttgactaaataataaatactataaaattactga-gaaaccctcctacatca 18203234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 18726974 - 18726883
Alignment:
Q  8 aaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||| |  ||| ||||  |||||||||| ||||||||||| |||||    
T  18726974 aaaacgaaataataatagaaagttctagaaaatgactaagatttggctaaa-ataaaaaactataaaattactaaaaaaaccctcctgcatca 18726883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 30049764 - 30049667
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||  ||||||||||  || ||||||||  ||||||||||  || |||||||||||||    
T  30049764 ataaaacaaaacaaaataataatagaaagttctagaaaatcactaaaatttggctaa--aaaaaatactataaaattactaaggaagccctcctacatca 30049667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 30052051 - 30051954
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||  ||||||||||  || ||||||||  ||||||||||  || |||||||||||||    
T  30052051 ataaaacaaaacaaaataataatagaaagttctagaaaatcactaaaatttggctaa--aaaaaatactataaaattactaaggaagccctcctacatca 30051954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 18780934 - 18780858
Alignment:
Q  177 gggctcttgtctgcaattggttaggtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttcact 253  Q
    |||||||||| || ||||||||||| ||||| | |||||||||||| || |||||||| || |||| ||||||||||    
T  18780934 gggctcttgtttggaattggttaggcatttcatttgtgcatgctggtgagcttcgacaacattttactcagttcact 18780858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11190348 - 11190252
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacat 98  Q
    |||||| ||||| | ||||||||| |||||||||||||||||||  | |||| ||||| |  |||||||| ||||||| ||| |||||||| ||||||    
T  11190348 ataaaacaaaacaatataataatagaaagttctagaaaattacttaggtttgactaaa-ataaaatactattaaattattaagaaaacccttctacat 11190252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 22910637 - 22910596
Alignment:
Q  59 taataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  22910637 taataaatactaataaattactaagaaaaccctcctacatca 22910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3535884 - 3535786
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| | || |||||| ||||| |  |||||||   ||||||||||  || |||||||||||||    
T  3535884 ataaaacaaaacaaaataataatagaaagttctagaaaatcattaagatttgactaaa-ataaaatactttaaaattactaaggaagccctcctacatca 3535786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3542095 - 3541997
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| | || |||||| ||||| |  |||||||   ||||||||||  || |||||||||||||    
T  3542095 ataaaacaaaacaaaataataatagaaagttctagaaaatcattaagatttgactaaa-ataaaatactttaaaattactaaggaagccctcctacatca 3541997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 22889090 - 22889053
Alignment:
Q  63 aaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22889090 aaatactaataaattactaagaaaaccctcctacatca 22889053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 8050125 - 8050161
Alignment:
Q  56 aaataataaatactactaaattactaataaaaccctc 92  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  8050125 aaataataaatactactaaattactaagaaaaacctc 8050161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40779027 - 40779122
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctaca 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||   ||||||||||  |||||||||||||    
T  40779027 ataaaataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactgtaaaattactaa-gaaaccctcctaca 40779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21845130 - 21845221
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctc 92  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||  |||||||||| |||||||||    
T  21845130 ataaaataaaacaaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctc 21845221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21849211 - 21849302
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctc 92  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||  |||||||||| |||||||||    
T  21849211 ataaaataaaacaaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctc 21849302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21857125 - 21857216
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctc 92  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||  |||||||||| |||||||||    
T  21857125 ataaaataaaacaaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctc 21857216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19501190 - 19501289
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||| ||||| ||||||||||| |||||| ||||||||||||| ||||||| |||| |  ||||||||  ||||||||||  ||||||||||||||||    
T  19501190 ataaaacaaaacaaaataataatagaaagttttagaaaattactaagatttgggtaaa-ataaaatactataaaattactaaagaaaccctcctacatca 19501288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 8456646 - 8456683
Alignment:
Q  63 aaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  8456646 aaatactactagattactaagaaaaccctcctacatca 8456683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 26140181 - 26140144
Alignment:
Q  63 aaatactactaaattactaataaaaccctcctacatca 100  Q
    ||||||||||||| || |||||||||||||||||||||    
T  26140181 aaatactactaaactattaataaaaccctcctacatca 26140144  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 217991 - 218141
Alignment:
Q  101 tcttgtgtgtttgggtgtggttccattgagtcggcggagcatctatttcttcattgtaccatggccggcaacctacgggctcttgtctgcaattggttag 200  Q
    ||||||| |||||| ||||| |||| |||||| ||||  ||||||||| |||| |||| | |   || ||||||  ||| |||||||||  | |||||||    
T  217991 tcttgtgcgtttggttgtggatccactgagtctgcggttcatctatttattcactgtaactttttcgtcaacctttggggtcttgtctgtcactggttag 218090  T
Q  201 gtatttcttatgtgcatgctggcgaacttcgacatcactttattcagttca 251  Q
    ||||||||| |||||| ||||| || ||||||||||| |||| ||||||||    
T  218091 gtatttcttttgtgcacgctggtgagcttcgacatcattttactcagttca 218141  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 45871 - 45955
Alignment:
Q  15 aataataatataaagttctagaaaattactatgatttggctaaataataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||| ||||||||||||||| ||||  ||||||||||| |  ||||||||  ||||||||||  || |||||||||||||    
T  45871 aataataatagaaagttctagaaaatcactaaaatttggctaaa-ataaaatactataaaattactaaggaagccctcctacatca 45955  T

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Target: scaffold0110; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46945 - 47002
Alignment:
Q  1 ataaaataaaacgaaataataatataaagttctagaaaattactatgatttggctaaa 58  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||  ||||| |||||    
T  46945 ataaaacaaaacaaaataataatagaaagttctagaaaatcactaaaatttgactaaa 47002  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 10490 - 10449
Alignment:
Q  59 taataaatactactaaattactaataaaaccctcctacatca 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  10490 taataaatactaataaattactaagaaaaccctcctacatca 10449  T

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