View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9025_low_10 (Length: 360)

Name: NF9025_low_10
Description: NF9025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9025_low_10
NF9025_low_10
[»] chr2 (55 HSPs)
chr2 (1-345)||(41446118-41446462)
chr2 (183-304)||(41454254-41454375)
chr2 (7-189)||(41455055-41455234)
chr2 (80-256)||(43406038-43406216)
chr2 (203-303)||(42261533-42261633)
chr2 (203-292)||(24398089-24398178)
chr2 (203-304)||(36318057-36318157)
chr2 (106-148)||(11067480-11067522)
chr2 (165-292)||(33648203-33648331)
chr2 (106-148)||(39285014-39285056)
chr2 (203-304)||(6595054-6595154)
chr2 (203-304)||(11690521-11690621)
chr2 (106-147)||(13121942-13121983)
chr2 (215-304)||(30218104-30218193)
chr2 (236-304)||(38312260-38312328)
chr2 (106-141)||(2838132-2838167)
chr2 (4-146)||(12123434-12123576)
chr2 (90-148)||(28672107-28672166)
chr2 (106-148)||(1345642-1345684)
chr2 (106-148)||(11049729-11049771)
chr2 (106-148)||(11151542-11151584)
chr2 (173-223)||(28196274-28196324)
chr2 (106-148)||(33162401-33162443)
chr2 (238-304)||(33162532-33162598)
chr2 (106-148)||(36773737-36773779)
chr2 (203-304)||(723792-723892)
chr2 (203-304)||(2334466-2334566)
chr2 (106-143)||(11690682-11690719)
chr2 (203-304)||(17057417-17057517)
chr2 (203-304)||(17085400-17085500)
chr2 (106-143)||(24885770-24885807)
chr2 (203-304)||(35446932-35447032)
chr2 (203-304)||(42362372-42362472)
chr2 (236-304)||(1631812-1631880)
chr2 (260-304)||(14202509-14202553)
chr2 (236-304)||(42288190-42288258)
chr2 (106-145)||(17490099-17490138)
chr2 (106-148)||(26353358-26353400)
chr2 (106-148)||(36317960-36318002)
chr2 (106-148)||(723693-723737)
chr2 (80-148)||(4561259-4561327)
chr2 (106-148)||(14202370-14202414)
chr2 (106-148)||(34139719-34139763)
chr2 (203-304)||(36988124-36988224)
chr2 (76-148)||(42019788-42019862)
chr2 (231-304)||(42019948-42020021)
chr2 (106-148)||(42362523-42362567)
chr2 (203-304)||(45726949-45727049)
chr2 (236-304)||(4484411-4484479)
chr2 (112-148)||(7815231-7815267)
chr2 (236-304)||(11151671-11151739)
chr2 (236-304)||(14633906-14633974)
chr2 (243-303)||(24885682-24885742)
chr2 (236-304)||(34811302-34811370)
chr2 (203-299)||(36773587-36773682)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-304)||(25073-25353)
[»] chr4 (58 HSPs)
chr4 (195-303)||(34112838-34112946)
chr4 (183-304)||(16422634-16422755)
chr4 (196-304)||(44570406-44570514)
chr4 (228-302)||(32091500-32091574)
chr4 (165-304)||(34788782-34788923)
chr4 (203-304)||(8665428-8665528)
chr4 (113-220)||(6766043-6766151)
chr4 (106-304)||(56178583-56178785)
chr4 (237-304)||(21688269-21688336)
chr4 (215-302)||(33089900-33089987)
chr4 (165-304)||(379400-379539)
chr4 (203-304)||(6542227-6542328)
chr4 (203-301)||(26175684-26175781)
chr4 (106-148)||(46147342-46147384)
chr4 (106-148)||(47038362-47038404)
chr4 (106-148)||(52467305-52467347)
chr4 (195-304)||(5349930-5350039)
chr4 (203-304)||(12073412-12073512)
chr4 (203-303)||(12119559-12119660)
chr4 (203-304)||(48143063-48143163)
chr4 (228-292)||(26699515-26699579)
chr4 (231-303)||(27417040-27417112)
chr4 (106-146)||(36463342-36463382)
chr4 (106-146)||(36994700-36994740)
chr4 (228-299)||(22882823-22882894)
chr4 (228-299)||(22934487-22934558)
chr4 (106-148)||(24969840-24969882)
chr4 (203-301)||(33989867-33989965)
chr4 (106-148)||(48142327-48142369)
chr4 (110-148)||(48893593-48893631)
chr4 (236-304)||(4587978-4588047)
chr4 (203-304)||(9927506-9927606)
chr4 (203-304)||(24969132-24969232)
chr4 (80-148)||(29056534-29056603)
chr4 (203-304)||(36994544-36994644)
chr4 (203-304)||(54199954-54200054)
chr4 (92-147)||(21703771-21703827)
chr4 (236-300)||(50262781-50262845)
chr4 (236-304)||(52467434-52467502)
chr4 (236-304)||(54883040-54883108)
chr4 (236-304)||(55085445-55085513)
chr4 (228-287)||(6677506-6677565)
chr4 (4-63)||(16420844-16420903)
chr4 (165-304)||(38811200-38811337)
chr4 (228-287)||(53345254-53345313)
chr4 (203-304)||(2209733-2209834)
chr4 (110-148)||(4588134-4588172)
chr4 (106-148)||(45687133-45687175)
chr4 (203-304)||(6655976-6656076)
chr4 (203-304)||(12745484-12745584)
chr4 (203-304)||(34570462-34570562)
chr4 (203-304)||(37740645-37740745)
chr4 (203-304)||(40632465-40632565)
chr4 (236-304)||(26364256-26364324)
chr4 (106-146)||(37229672-37229712)
chr4 (236-304)||(46147471-46147539)
chr4 (260-304)||(47038514-47038558)
chr4 (228-292)||(48142450-48142514)
[»] chr3 (56 HSPs)
chr3 (166-302)||(25490978-25491114)
chr3 (191-304)||(24635277-24635390)
chr3 (203-304)||(46173377-46173477)
chr3 (236-304)||(20937676-20937744)
chr3 (236-304)||(46860494-46860562)
chr3 (206-304)||(54739004-54739102)
chr3 (106-148)||(23391860-23391902)
chr3 (106-148)||(29196337-29196379)
chr3 (106-148)||(31314620-31314662)
chr3 (80-148)||(2074999-2075068)
chr3 (206-303)||(8166507-8166604)
chr3 (107-148)||(21350955-21350996)
chr3 (106-148)||(9666417-9666459)
chr3 (106-148)||(16499204-16499246)
chr3 (203-304)||(32891123-32891224)
chr3 (106-148)||(32891279-32891321)
chr3 (106-148)||(44700430-44700472)
chr3 (203-304)||(49199517-49199618)
chr3 (203-301)||(54593727-54593824)
chr3 (228-304)||(5433948-5434025)
chr3 (203-304)||(7762285-7762385)
chr3 (203-304)||(22835050-22835150)
chr3 (203-304)||(29682379-29682479)
chr3 (203-304)||(30236145-30236245)
chr3 (203-304)||(34491232-34491332)
chr3 (215-304)||(35138765-35138854)
chr3 (203-304)||(40735403-40735503)
chr3 (106-147)||(51352084-51352125)
chr3 (236-304)||(5236536-5236604)
chr3 (191-304)||(7764484-7764598)
chr3 (106-304)||(19683835-19684037)
chr3 (236-304)||(31340281-31340349)
chr3 (106-149)||(53921454-53921497)
chr3 (106-148)||(23410280-23410322)
chr3 (106-148)||(27305661-27305703)
chr3 (106-148)||(32744387-32744429)
chr3 (203-304)||(760867-760967)
chr3 (106-148)||(761022-761066)
chr3 (236-304)||(5373252-5373321)
chr3 (203-304)||(9581302-9581402)
chr3 (106-143)||(39153311-39153348)
chr3 (203-304)||(40734518-40734618)
chr3 (203-304)||(44331565-44331665)
chr3 (203-304)||(44700526-44700626)
chr3 (203-304)||(45095183-45095283)
chr3 (236-304)||(5258224-5258292)
chr3 (236-304)||(5260403-5260471)
chr3 (240-304)||(9636210-9636274)
chr3 (260-304)||(23410433-23410477)
chr3 (203-303)||(29810889-29810988)
chr3 (236-304)||(29813083-29813151)
chr3 (236-304)||(37408478-37408546)
chr3 (232-304)||(39153437-39153509)
chr3 (260-304)||(43401906-43401950)
chr3 (98-126)||(45095365-45095393)
chr3 (268-304)||(47304271-47304307)
[»] chr7 (48 HSPs)
chr7 (164-304)||(43363480-43363622)
chr7 (4-148)||(40808763-40808908)
chr7 (203-304)||(6431991-6432091)
chr7 (203-304)||(22269993-22270093)
chr7 (203-303)||(5116625-5116725)
chr7 (106-148)||(1113832-1113874)
chr7 (106-148)||(12097818-12097860)
chr7 (203-304)||(23565109-23565210)
chr7 (106-148)||(24525453-24525495)
chr7 (106-148)||(36146359-36146401)
chr7 (236-304)||(4253609-4253678)
chr7 (203-304)||(26417336-26417436)
chr7 (236-304)||(2390302-2390370)
chr7 (106-148)||(8153517-8153559)
chr7 (106-148)||(23565013-23565055)
chr7 (54-147)||(36574415-36574508)
chr7 (215-304)||(36574575-36574665)
chr7 (106-148)||(41317385-41317427)
chr7 (203-304)||(496031-496131)
chr7 (203-304)||(4586181-4586281)
chr7 (203-303)||(18396338-18396438)
chr7 (203-304)||(30024780-30024880)
chr7 (231-304)||(43864264-43864337)
chr7 (203-304)||(47673991-47674091)
chr7 (203-304)||(48491599-48491699)
chr7 (236-304)||(2361052-2361120)
chr7 (232-304)||(4510624-4510696)
chr7 (232-304)||(4512466-4512538)
chr7 (236-292)||(22328471-22328527)
chr7 (236-304)||(27347837-27347905)
chr7 (236-304)||(29608757-29608825)
chr7 (236-304)||(31733049-31733117)
chr7 (236-304)||(48489451-48489519)
chr7 (236-304)||(48599414-48599482)
chr7 (236-303)||(4508786-4508853)
chr7 (165-304)||(8359325-8359465)
chr7 (118-304)||(13065363-13065546)
chr7 (236-302)||(1113679-1113745)
chr7 (93-304)||(23555060-23555276)
chr7 (110-148)||(31519078-31519116)
chr7 (259-303)||(5514112-5514157)
chr7 (106-148)||(41648960-41649004)
chr7 (228-276)||(23793904-23793952)
chr7 (240-304)||(31105477-31105541)
chr7 (236-304)||(31518815-31518883)
chr7 (236-304)||(35853934-35854002)
chr7 (213-249)||(40808663-40808699)
chr7 (236-304)||(47676216-47676284)
[»] chr5 (35 HSPs)
chr5 (195-304)||(10700688-10700796)
chr5 (129-298)||(32579250-32579418)
chr5 (195-298)||(30802854-30802957)
chr5 (203-304)||(3075706-3075806)
chr5 (228-304)||(316782-316858)
chr5 (166-298)||(32609561-32609693)
chr5 (231-304)||(28278336-28278409)
chr5 (195-256)||(30793204-30793265)
chr5 (236-304)||(533789-533857)
chr5 (106-304)||(13239771-13239973)
chr5 (228-292)||(13695763-13695827)
chr5 (236-304)||(16452100-16452168)
chr5 (236-304)||(33831700-33831768)
chr5 (236-304)||(38747025-38747093)
chr5 (213-304)||(14689484-14689575)
chr5 (106-148)||(538200-538242)
chr5 (86-148)||(9299759-9299821)
chr5 (213-303)||(35616190-35616280)
chr5 (203-304)||(213485-213585)
chr5 (203-304)||(13488223-13488323)
chr5 (185-302)||(32583312-32583429)
chr5 (203-304)||(42428478-42428578)
chr5 (236-304)||(538045-538113)
chr5 (228-304)||(3325933-3326009)
chr5 (236-304)||(39468629-39468697)
chr5 (236-304)||(42310015-42310083)
chr5 (106-148)||(8565897-8565940)
chr5 (103-304)||(25412780-25412985)
chr5 (206-304)||(10054867-10054964)
chr5 (106-148)||(13695641-13695683)
chr5 (106-148)||(16649781-16649823)
chr5 (236-304)||(16641017-16641086)
chr5 (236-304)||(27637692-27637761)
chr5 (203-304)||(32636844-32636944)
chr5 (203-304)||(40147281-40147381)
[»] chr8 (53 HSPs)
chr8 (106-304)||(19491649-19491847)
chr8 (203-304)||(40221765-40221865)
chr8 (106-148)||(30291783-30291825)
chr8 (203-304)||(30143360-30143460)
chr8 (203-304)||(32902221-32902322)
chr8 (106-147)||(40321256-40321297)
chr8 (236-304)||(1292543-1292611)
chr8 (203-291)||(7597647-7597735)
chr8 (260-304)||(10929819-10929863)
chr8 (236-304)||(18655420-18655488)
chr8 (236-304)||(27811298-27811366)
chr8 (236-304)||(42435071-42435139)
chr8 (210-304)||(41266988-41267083)
chr8 (106-304)||(42498214-42498416)
chr8 (110-148)||(1345326-1345364)
chr8 (106-148)||(3073825-3073867)
chr8 (110-148)||(3303625-3303663)
chr8 (106-148)||(4743165-4743207)
chr8 (203-304)||(40328799-40328900)
chr8 (203-304)||(4283544-4283644)
chr8 (203-304)||(4731678-4731778)
chr8 (106-147)||(5689447-5689488)
chr8 (45-141)||(7597798-7597894)
chr8 (231-302)||(1822313-1822385)
chr8 (231-302)||(1856758-1856830)
chr8 (228-303)||(3231868-3231944)
chr8 (236-304)||(3303750-3303818)
chr8 (236-304)||(4162517-4162585)
chr8 (236-304)||(12702714-12702782)
chr8 (236-304)||(15212806-15212874)
chr8 (106-148)||(1292415-1292457)
chr8 (242-304)||(6598992-6599054)
chr8 (242-304)||(6674445-6674507)
chr8 (106-148)||(8965642-8965684)
chr8 (106-148)||(10015254-10015296)
chr8 (106-148)||(18141993-18142035)
chr8 (203-304)||(30291626-30291727)
chr8 (201-303)||(30909389-30909489)
chr8 (106-143)||(6599153-6599190)
chr8 (106-143)||(6674606-6674643)
chr8 (215-292)||(10240186-10240263)
chr8 (203-304)||(18141841-18141940)
chr8 (4-37)||(29796171-29796204)
chr8 (203-304)||(33352170-33352270)
chr8 (236-304)||(1746298-1746366)
chr8 (203-255)||(3899198-3899250)
chr8 (236-304)||(11384005-11384073)
chr8 (231-291)||(11712076-11712136)
chr8 (110-142)||(18106026-18106058)
chr8 (236-304)||(31218277-31218345)
chr8 (260-304)||(41366718-41366762)
chr8 (260-304)||(43036443-43036487)
chr8 (236-304)||(44353813-44353881)
[»] chr1 (62 HSPs)
chr1 (106-304)||(41360934-41361132)
chr1 (203-304)||(22079336-22079437)
chr1 (199-304)||(16914218-16914324)
chr1 (185-303)||(1485799-1485918)
chr1 (197-304)||(4535522-4535629)
chr1 (210-304)||(25652106-25652200)
chr1 (106-148)||(40122147-40122189)
chr1 (106-148)||(46065093-46065135)
chr1 (165-304)||(47255349-47255488)
chr1 (106-148)||(50167126-50167168)
chr1 (106-148)||(50169161-50169203)
chr1 (228-304)||(3460715-3460792)
chr1 (203-304)||(11348718-11348818)
chr1 (106-147)||(13137927-13137968)
chr1 (203-304)||(13549048-13549148)
chr1 (164-304)||(12318532-12318671)
chr1 (80-135)||(918597-918652)
chr1 (206-302)||(10925245-10925343)
chr1 (106-148)||(927927-927969)
chr1 (203-297)||(6808479-6808573)
chr1 (203-304)||(7482278-7482379)
chr1 (203-301)||(9109467-9109565)
chr1 (106-148)||(13659287-13659329)
chr1 (106-148)||(28265505-28265547)
chr1 (203-304)||(37559916-37560017)
chr1 (231-292)||(928051-928112)
chr1 (203-304)||(3156885-3156985)
chr1 (106-147)||(3460872-3460913)
chr1 (106-147)||(5460083-5460124)
chr1 (106-147)||(10925402-10925443)
chr1 (203-304)||(13547137-13547237)
chr1 (203-304)||(19754515-19754615)
chr1 (203-304)||(28220274-28220374)
chr1 (203-304)||(28265602-28265702)
chr1 (203-304)||(31659258-31659358)
chr1 (203-304)||(49918370-49918470)
chr1 (236-304)||(4552717-4552785)
chr1 (236-304)||(15820327-15820395)
chr1 (236-304)||(19752706-19752774)
chr1 (228-292)||(37282764-37282828)
chr1 (106-148)||(16455796-16455838)
chr1 (106-148)||(16914126-16914168)
chr1 (106-144)||(23555217-23555255)
chr1 (203-304)||(37168317-37168418)
chr1 (106-148)||(45644305-45644347)
chr1 (231-304)||(47115191-47115265)
chr1 (106-148)||(834116-834160)
chr1 (106-148)||(3847070-3847114)
chr1 (119-223)||(6398746-6398851)
chr1 (203-304)||(8550835-8550935)
chr1 (182-223)||(24215148-24215189)
chr1 (203-304)||(28223469-28223569)
chr1 (203-304)||(31925755-31925855)
chr1 (111-148)||(36683855-36683892)
chr1 (195-304)||(41135840-41135949)
chr1 (203-304)||(44455180-44455280)
chr1 (236-304)||(13316432-13316500)
chr1 (260-304)||(23555369-23555413)
chr1 (260-304)||(29136267-29136311)
chr1 (260-304)||(37033177-37033221)
chr1 (260-304)||(37879015-37879059)
chr1 (236-304)||(42298055-42298123)
[»] scaffold0002 (2 HSPs)
scaffold0002 (203-303)||(490368-490468)
scaffold0002 (236-304)||(434553-434621)
[»] chr6 (25 HSPs)
chr6 (203-304)||(2972987-2973087)
chr6 (159-304)||(3808711-3808857)
chr6 (203-304)||(17758043-17758143)
chr6 (203-304)||(21588951-21589051)
chr6 (203-304)||(21593684-21593784)
chr6 (207-299)||(12221155-12221247)
chr6 (236-303)||(5043648-5043715)
chr6 (106-145)||(33211136-33211175)
chr6 (106-148)||(3038874-3038916)
chr6 (206-290)||(603139-603222)
chr6 (103-304)||(5413338-5413542)
chr6 (103-304)||(31404618-31404823)
chr6 (226-304)||(186734-186812)
chr6 (106-148)||(4045593-4045635)
chr6 (106-148)||(14521628-14521670)
chr6 (189-304)||(26830155-26830271)
chr6 (203-304)||(5406248-5406348)
chr6 (203-304)||(5410573-5410673)
chr6 (203-304)||(9183079-9183179)
chr6 (106-148)||(16569197-16569241)
chr6 (232-301)||(22615994-22616063)
chr6 (203-304)||(28137456-28137556)
chr6 (236-304)||(3038983-3039051)
chr6 (260-304)||(17763010-17763054)
chr6 (236-304)||(30834616-30834684)
[»] scaffold0219 (1 HSPs)
scaffold0219 (81-303)||(27366-27591)
[»] scaffold1668 (1 HSPs)
scaffold1668 (106-148)||(1449-1491)
[»] scaffold0466 (1 HSPs)
scaffold0466 (236-304)||(7347-7415)
[»] scaffold0006 (1 HSPs)
scaffold0006 (106-148)||(149048-149090)
[»] scaffold0491 (1 HSPs)
scaffold0491 (205-304)||(11211-11310)
[»] scaffold0176 (1 HSPs)
scaffold0176 (231-304)||(18078-18151)
[»] scaffold0066 (1 HSPs)
scaffold0066 (236-301)||(20495-20560)
[»] scaffold1519 (1 HSPs)
scaffold1519 (236-304)||(936-1004)
[»] scaffold0014 (1 HSPs)
scaffold0014 (260-304)||(80387-80431)


Alignment Details
Target: chr2 (Bit Score: 292; Significance: 1e-164; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 41446462 - 41446118
Alignment:
Q  1 taaatgtgtggagcaaaaggaagtagtaaccagtatcgttgtagcctgaagcaacaacaacaaatgacagacttggatataatctagtaaccaagtataa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41446462 taaatgtgtggagcaaaagaaagtagtaaccagtatcgttgtagcctgaagcaacaacaacaaatgatagacttggatataatctagtaaccaagtataa 41446363  T
Q  101 aacacaaaccacaagcaaaagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagag 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41446362 aacacaaaccacaagcaaaagataaagagagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataatgacctacgtttggaggagag 41446263  T
Q  201 acatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttc 300  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41446262 acatctctccacttcactgtcaaccagttctttataaagagatacaaaagggttacttaaaattagcttcaacaagctctcaaagaacaaacataatttc 41446163  T
Q  301 taccnnnnnnncgaatctctctccgtgattaagaggctcaatgat 345  Q
    ||||       ||||||||| ||||||||||||||||||||||||    
T  41446162 tacctttttttcgaatctctttccgtgattaagaggctcaatgat 41446118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 41454375 - 41454254
Alignment:
Q  183 cctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctca 282  Q
    |||||||| |||||||||| |||| ||||||||||||||||  | ||||||| ||| | ||||||||| ||| ||  ||||||| |||||||||||||||    
T  41454375 cctacgttgggaggagagagatctgtccacttcactatcaatgagttctttacaaatatatacaaaagagttgctagaaattagcttcaacaagctctca 41454276  T
Q  283 aagaacaaacataatttctacc 304  Q
    || ||||||  |||||||||||    
T  41454275 aaaaacaaatctaatttctacc 41454254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 41455234 - 41455055
Alignment:
Q  7 tgtggagcaaaaggaagtagtaaccagtatcgttgtagcctgaagcaacaacaacaaatgacagacttggatataatctagtaaccaagtataaaacaca 106  Q
    |||||||||||||||||||||||||  ||||   ||||||| ||||||||| ||||  ||  |||| |  || ||||||||||||||||| |||| || |    
T  41455234 tgtggagcaaaaggaagtagtaaccgatatcaaagtagcctcaagcaacaataacagttgt-agacctatatctaatctagtaaccaagtgtaaagcata 41455136  T
Q  107 aaccacaagcaaaagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgt 189  Q
    ||||| ||| ||||||||||  |||| ||||||| |||||||  | |||||||||  ||||||| ||||| ||| ||||||||    
T  41455135 aaccataagaaaaagataaa--gagaggagaaaccaacacacaaagatttgatcatctagttcgtcccaacaatgacctacgt 41455055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 256
Target Start/End: Complemental strand, 43406216 - 43406038
Alignment:
Q  80 taatctagtaaccaagtataaaacacaaaccacaagcaaaagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataa 179  Q
    ||||||| ||||| ||| ||||||||||||||||||||| | |||||| || |||||||||||||||| | ||||||| |||   |||| ||||||| ||    
T  43406216 taatctaataacctagtgtaaaacacaaaccacaagcaacatataaagagaaaagagaaacaaacaca-tcaaatttgttcatcaagtttggcccaacaa 43406118  T
Q  180 taacctacgtttggaggagagacatctctccacttcactatcaacca---attctttataaagagatacaaaagggttac 256  Q
    | || || || ||||||||| | ||||||||| || || |||||| |    || |||| ||||||||||| |||||||||    
T  43406117 tgacttatgtatggaggagaaagatctctccattttacaatcaacgagtttttatttacaaagagatacacaagggttac 43406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 303
Target Start/End: Original strand, 42261533 - 42261633
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    |||||||| ||||||||||||  | | ||||| ||||| ||||||||| |||||   ||||||| |||||||||||||| |||||||||| |||||||||    
T  42261533 atctctccgcttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaatttcta 42261632  T
Q  303 c 303  Q
    |    
T  42261633 c 42261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 292
Target Start/End: Complemental strand, 24398178 - 24398089
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    ||||||||| | || ||||||  | ||||||| |||||||||||||||||||||   ||||||| |||||||||||| ||||||||||||    
T  24398178 atctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaac 24398089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 36318057 - 36318157
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   |||||||||||||||||||| |||||||||| | |||||||||    
T  36318057 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaaccctaatttcta 36318155  T
Q  303 cc 304  Q
    ||    
T  36318156 cc 36318157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 11067522 - 11067480
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  11067522 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 11067480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 292
Target Start/End: Complemental strand, 33648331 - 33648203
Alignment:
Q  165 agttcggcccaataataacctacgtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaa 262  Q
    ||||||| |||| ||| |||||| | |||||||||||   ||||||||| | | |||||||  | ||||||| ||||| |||||||||||||||   |||    
T  33648331 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccgctatcaatgagttctttacaaagaaatacaaaagggttacaggaaa 33648233  T
Q  263 ttagtttcaacaagctctcaaagaacaaac 292  Q
    |||| |||||||||||| ||||||||||||    
T  33648232 ttagcttcaacaagctcacaaagaacaaac 33648203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 39285056 - 39285014
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  39285056 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 39285014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 6595054 - 6595154
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||| | ||||| | |||||||| ||||||||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  6595054 atctctccaatccactatcaacgagttctt-acaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 6595152  T
Q  303 cc 304  Q
    ||    
T  6595153 cc 6595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 11690621 - 11690521
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||| | ||||| | |||| |||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||    
T  11690621 atctctccaatccactatcaacgatttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 11690523  T
Q  303 cc 304  Q
    ||    
T  11690522 cc 11690521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 13121983 - 13121942
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  13121983 aaaccacaagcaaaagataaagagagaagagaaacaaacaca 13121942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 30218104 - 30218193
Alignment:
Q  215 cactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||  |||| |||| |||||||||||||| ||||||   ||||||| ||||| |||||||| |||||||||| ||| |||||||    
T  30218104 cactatcaatgaattatttacaaagagatacaaaatggttacaagaaattagcttcaataagctctccaagaacaaacctaacttctacc 30218193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 38312328 - 38312260
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||||||||||||| || |||||||||| | |||||||||||    
T  38312328 aaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacc 38312260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 2838167 - 2838132
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaaca 141  Q
    ||||||||||||||||||||||||||||||||||||    
T  2838167 aaaccacaagcaaaagataaagtgagaagagaaaca 2838132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 12123434 - 12123576
Alignment:
Q  4 atgtgtggagcaaaaggaagtagtaaccagtatcgttgtagcctgaagcaacaacaacaaatgacagacttggatataatctagtaaccaagtataaaac 103  Q
    |||||||||||||| | |||||||||||| ||||   ||| ||| || |||||||||||| | ||| || |  || |||||||| || |||||  ||||     
T  12123434 atgtgtggagcaaaggaaagtagtaaccaatatcaaagtaacctcaaacaacaacaacaa-taacaaacctatatctaatctagaaatcaagtgaaaaat 12123532  T
Q  104 acaaac-cacaagcaaaagataaagtgagaagagaaacaaacac 146  Q
    |||||  |||||||||||||||||| || |||||||||||||||    
T  12123533 acaaaatcacaagcaaaagataaagagataagagaaacaaacac 12123576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 28672166 - 28672107
Alignment:
Q  90 accaagtataaaacacaaac-cacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||| |||||||||||  |||||||||| ||||||| ||||||||||||||||||||    
T  28672166 accaagtgtaaaacacaaaatcacaagcaaaggataaagagagaagagaaacaaacacac 28672107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 1345684 - 1345642
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  1345684 aaaccacaatcataagataaagtgagaagagaaacaaacacac 1345642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 11049771 - 11049729
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  11049771 aaaccacaagcaaaatataaagagagaagagaaacaaacacac 11049729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 11151542 - 11151584
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  11151542 aaaccacaaacaaaagataaagagagaagagaaacaaacacac 11151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 28196324 - 28196274
Alignment:
Q  173 ccaataataacctacgtttggaggagagacatctctccacttcactatcaa 223  Q
    |||||||| |||||  | |||||||||||||||||||||||||||||||||    
T  28196324 ccaataatgacctagatatggaggagagacatctctccacttcactatcaa 28196274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 33162401 - 33162443
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  33162401 aaaccacaagcaaaagataaatagagaagagaaacaaacacac 33162443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 33162532 - 33162598
Alignment:
Q  238 agagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  33162532 agagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 33162598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 36773779 - 36773737
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  36773779 aaaccacaagcaaaagataaagaaagaagagaaacaaacacac 36773737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 723792 - 723892
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||    
T  723792 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 723890  T
Q  303 cc 304  Q
    ||    
T  723891 cc 723892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 2334466 - 2334566
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||||| ||||||  ||||||| ||||||||| || |||||||||| | | |||||||    
T  2334466 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaacccttatttcta 2334564  T
Q  303 cc 304  Q
    ||    
T  2334565 cc 2334566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 11690719 - 11690682
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaa 143  Q
    |||||||||||||||||||||| |||||||||||||||    
T  11690719 aaaccacaagcaaaagataaagggagaagagaaacaaa 11690682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 17057417 - 17057517
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||  |||||||| |||||||||||  |||||||||| | |||||||||    
T  17057417 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatttcta 17057515  T
Q  303 cc 304  Q
    ||    
T  17057516 cc 17057517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 17085400 - 17085500
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||  |||||||| |||||||||||  |||||||||| | |||||||||    
T  17085400 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatttcta 17085498  T
Q  303 cc 304  Q
    ||    
T  17085499 cc 17085500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 24885807 - 24885770
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaa 143  Q
    |||||||||||||||||||||| |||||||||||||||    
T  24885807 aaaccacaagcaaaagataaagggagaagagaaacaaa 24885770  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 35446932 - 35447032
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  35446932 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaacaaccctaatttcta 35447030  T
Q  303 cc 304  Q
    ||    
T  35447031 cc 35447032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 42362472 - 42362372
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||    
T  42362472 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 42362374  T
Q  303 cc 304  Q
    ||    
T  42362373 cc 42362372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 1631812 - 1631880
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   | ||||| |||||||||||| |||||||||| | |||||||||||    
T  1631812 aaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaatcctaatttctacc 1631880  T

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Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 14202509 - 14202553
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||    
T  14202509 aaattagcttaaacaagctcacaaagaacaaacataatttctacc 14202553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 42288190 - 42288258
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||| ||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  42288190 aaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccttaatttctacc 42288258  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 17490099 - 17490138
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaaca 145  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  17490099 aaaccacaagcaaatgataaagagagaagagaaacaaaca 17490138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 26353400 - 26353358
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||| | ||| ||||||||||||||||    
T  26353400 aaaccacaagcaaaagataaggagaggagagaaacaaacacac 26353358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 36317960 - 36318002
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||||||||||||  |||||| ||||||||||||    
T  36317960 aaaccacaagcaaaagataaagaaagaagataaacaaacacac 36318002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 723693 - 723737
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  723693 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 723737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 4561327 - 4561259
Alignment:
Q  80 taatctagtaaccaagtataaaacacaaa-ccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||  |||||||| ||||||||||| ||||||||||||||||||  ||||| ||||| ||||||||    
T  4561327 taatctaagaaccaagtgtaaaacacaaaaccacaagcaaaagataaatagagaa-agaaagaaacacac 4561259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 14202370 - 14202414
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagag--aaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||    
T  14202370 aaaccacaagcaaaagataaagagagaagagataaacaaacacac 14202414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 34139719 - 34139763
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  34139719 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 34139763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 36988124 - 36988224
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||||| |||||   ||||||||||  |||||||| || ||||||| | |||||||||    
T  36988124 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaaccctaatttcta 36988222  T
Q  303 cc 304  Q
    ||    
T  36988223 cc 36988224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 42019788 - 42019862
Alignment:
Q  76 gatataatctagtaaccaagtataaaacaca---aaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||  |||||||  |||||||||   ||||||| |||||| |||||| ||||||||||||||||||||    
T  42019788 gatataatctacgaaccaagagtaaaacacatcaaaccacaggcaaaa-ataaagagagaagagaaacaaacacac 42019862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 42019948 - 42020021
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| ||||||||||||||| |||||   ||||||| ||| ||||||| |  |||||||||||||| |||||||    
T  42019948 tttacaaagagatacaaaagagttacaagaaattagcttctacaagctttataagaacaaacataaattctacc 42020021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 42362567 - 42362523
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  42362567 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 42362523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 45727049 - 45726949
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||  ||||||   ||||||| |||||||||||| ||||||||||   |||||||||    
T  45727049 atctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttcta 45726951  T
Q  303 cc 304  Q
    ||    
T  45726950 cc 45726949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 4484411 - 4484479
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  4484411 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 4484479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 7815231 - 7815267
Alignment:
Q  112 caagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||||||  |||||||||||||||||||    
T  7815231 caagcaaaagataaagaaagaagagaaacaaacacac 7815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 11151671 - 11151739
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||| |||||||   ||||||| || ||||||||| |||||||||||  |||||||||||    
T  11151671 aaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatctaatttctacc 11151739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 14633906 - 14633974
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||| |||||||   ||||||| || ||||||||| |||||||||| | |||||||||||    
T  14633906 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaatcctaatttctacc 14633974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 24885742 - 24885682
Alignment:
Q  243 tacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctac 303  Q
    |||||| |||||||   ||||||| || ||||||||| |||||||||||| ||||||||||    
T  24885742 tacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctac 24885682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 34811302 - 34811370
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||| ||||| |||||   ||||||| |||||||||||||| |||| ||| | |||||||||||    
T  34811302 aaagagatataaaagagttacaataaattagcttcaacaagctctctaagagcaatcttaatttctacc 34811370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 36773682 - 36773587
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||| | ||||||    
T  36773682 atctctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaattt 36773587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 304
Target Start/End: Complemental strand, 25353 - 25073
Alignment:
Q  12 agcaaaaggaagtagtaaccagtatcgttgtagcctgaagcaacaacaacaaatgacagacttggatataatctagtaaccaagtataaaacacaaacca 111  Q
    ||||||||||||||||||||| | ||  ||||||||  ||||||||| ||||  |   ||| | ||| ||||||||||||||||| |||| |||||||||    
T  25353 agcaaaaggaagtagtaaccaatttcaatgtagcctcgagcaacaaccacaatagtt-gacctagatctaatctagtaaccaagtgtaaagcacaaacca 25255  T
Q  112 caagcaaaagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagagacatctctcca 211  Q
     |||||||||||||| |||| ||||||| |||||||   | ||||| ||||  || ||||||||||||| ||||           ||||| ||||||| |    
T  25254 aaagcaaaagataaattgaggagagaaataaacacagcaagatttgttcacccagatcggcccaataatgacct-----------agagagatctctcta 25166  T
Q  212 cttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||  | ||||||| |||||||||||||| ||||||   ||||||  |||||||| |||||||||||||||  || ||||||||    
T  25165 cttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaaactagtttctacc 25073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 34112946 - 34112838
Alignment:
Q  195 ggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacat 294  Q
    ||||||| |||||||||||||||||||||  | ||||||| |||||||| |||||||||||| | ||||||| ||||||||||||||  |||||||||||    
T  34112946 ggagagagatctctccacttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaacat 34112847  T
Q  295 aatttctac 303  Q
    |||||||||    
T  34112846 aatttctac 34112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 304
Target Start/End: Original strand, 16422634 - 16422755
Alignment:
Q  183 cctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctca 282  Q
    |||||||| |||| ||||| ||||||||||||||||||| |  | ||| ||| ||||| ||||||||||||| ||  ||||||| ||||| |||||||||    
T  16422634 cctacgttgggagaagagagatctctccacttcactatccatgagttcattacaaagatatacaaaagggtttctagaaattagcttcaaaaagctctca 16422733  T
Q  283 aagaacaaacataatttctacc 304  Q
    || |||||||||||||||||||    
T  16422734 aaaaacaaacataatttctacc 16422755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 44570406 - 44570514
Alignment:
Q  196 gagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacata 295  Q
    |||||| || ||||||| || |||||||  | ||||||| ||||||||||||||  |||||   |||||||||||||||||||||| || ||||||||||    
T  44570406 gagagagatatctccacatctctatcaatgagttctttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacata 44570505  T
Q  296 atttctacc 304  Q
    |||||||||    
T  44570506 atttctacc 44570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 32091574 - 32091500
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||| ||||||||||||||| |||||   |||||||||||||||| ||||| |||||||||| |||||||||    
T  32091574 ttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttcta 32091500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 304
Target Start/End: Original strand, 34788782 - 34788923
Alignment:
Q  165 agttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaa--ttctttataaagagatacaaaagggttacttaaaa 262  Q
    ||||||| ||| |||| |||||| ||||||||||||| ||| ||| ||||| |||||||   |  ||||||| ||||||||||||||| |||||   |||    
T  34788782 agttcggtccagtaatgacctacatttggaggagagagatccctctacttcgctatcaaaagagtttctttacaaagagatacaaaagagttacaagaaa 34788881  T
Q  263 ttagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||  |||||||||||||| |||| ||| | |||||||||||    
T  34788882 ttaacttcaacaagctctccaagagcaatcctaatttctacc 34788923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 8665528 - 8665428
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||||||||||||||||| | |||||||||    
T  8665528 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaaccctaatttcta 8665430  T
Q  303 cc 304  Q
    ||    
T  8665429 cc 8665428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 6766043 - 6766151
Alignment:
Q  113 aagcaaaagataaagtgagaagagaaacaaacacactga-aatttgatcacatagttcggcccaataataacctacgtttggaggagagacatctctcca 211  Q
    ||||||||||||| |||||||| |||||||||||||  | |||||| ||||  ||||| || ||| |||||||||| | ||||||||||| |||||| ||    
T  6766043 aagcaaaagataatgtgagaagtgaaacaaacacaccaagaatttgttcacccagttcagctcaacaataacctacatctggaggagagagatctcttca 6766142  T
Q  212 cttcactat 220  Q
     ||||||||    
T  6766143 tttcactat 6766151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 304
Target Start/End: Original strand, 56178583 - 56178785
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagaga 201  Q
    |||||||||||||||||||||  ||||    ||||||||||||||||  ||  ||| ||||  ||||||| ||||   | |||||| | |||||||||||    
T  56178583 aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaagattgttcacccagttcggtccaaacttgacctac-tctggaggagaga 56178681  T
Q  202 c--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
       ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||||||||| || |||||||||| | ||||||    
T  56178682 ttgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaattt 56178780  T
Q  300 ctacc 304  Q
    |||||    
T  56178781 ctacc 56178785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 304
Target Start/End: Complemental strand, 21688336 - 21688269
Alignment:
Q  237 aagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||| | |||||  ||||||||||||||||||||| |||||||||| | |||||||||||    
T  21688336 aagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaacaaccctaatttctacc 21688269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 33089987 - 33089900
Alignment:
Q  215 cactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    |||||||||  | ||||||| | |||||||||||| |||||    ||||||| |||||||||||||| ||||||||||||||||||||    
T  33089987 cactatcaatgagttctttacagagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaacataatttcta 33089900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 304
Target Start/End: Complemental strand, 379539 - 379400
Alignment:
Q  165 agttcggcccaataataacctacgtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaa 262  Q
    ||||||| |||| ||| |||||| | |||||||||||   ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   |||    
T  379539 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactatcaattagttctt-acaaagcgatacaaatgggttacaagaaa 379442  T
Q  263 ttagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||||||| |||||||||||| |||||||||||    
T  379441 ttagcttcaacaagctcacaaagaacaaacctaatttctacc 379400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 6542227 - 6542328
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttct 301  Q
    ||||||||| | |||||||||| | ||||| | |||||||||||||||| | ||   |||||||||||||||||||| ||||||||||| | ||||||||    
T  6542227 atctctccaatccactatcaacgagttctt-acaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttct 6542325  T
Q  302 acc 304  Q
    |||    
T  6542326 acc 6542328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 26175684 - 26175781
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   |||||||||||||||||||| |||||||||| | ||||||||    
T  26175684 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttct 26175781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 46147342 - 46147384
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  46147342 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 46147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 47038362 - 47038404
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47038362 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 47038404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 52467305 - 52467347
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  52467305 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 52467347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 5350039 - 5349930
Alignment:
Q  195 ggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacat 294  Q
    ||||||| |||||||| ||||| ||||||| | ||||||| ||||||||||||| | | |||    |||||| ||| ||||| || |||||||||||| |    
T  5350039 ggagagagatctctccgcttcattatcaacgagttctttacaaagagatacaaacgagctacaaggaattagcttcgacaagttcacaaagaacaaacct 5349940  T
Q  295 aatttctacc 304  Q
    ||||||||||    
T  5349939 aatttctacc 5349930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 12073512 - 12073412
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||||| |||||||||    
T  12073512 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacctaatttcta 12073414  T
Q  303 cc 304  Q
    ||    
T  12073413 cc 12073412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 12119660 - 12119559
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttct 301  Q
    ||||||||| | |||||| ||  | ||||||| |||||||||||||||||||||   ||||||| ||||| ||| || ||||||||||| ||||||||||    
T  12119660 atctctccaatccactataaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataatttct 12119561  T
Q  302 ac 303  Q
    ||    
T  12119560 ac 12119559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 48143163 - 48143063
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| || ||||||||||||||||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  48143163 atctctccaatccactatcaatgagttctt-atgaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 48143065  T
Q  303 cc 304  Q
    ||    
T  48143064 cc 48143063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 26699515 - 26699579
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    ||||||| ||||||||||||||| |||||   ||||||| |||||||||||| ||||||||||||    
T  26699515 ttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaac 26699579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 27417040 - 27417112
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctac 303  Q
    |||| ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | ||||||||||    
T  27417040 tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctac 27417112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 36463342 - 36463382
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacac 146  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  36463342 aaaccacaagcaaaagataaagagagaagagaaacaaacac 36463382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 36994740 - 36994700
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacac 146  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  36994740 aaaccacaagcaaaagataaagagagaagagaaacaaacac 36994700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 22882823 - 22882894
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
    |||||||  ||||||||||||||||||||   ||||||| |||||||| ||||| |||||||||| ||||||    
T  22882823 ttctttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaacctaattt 22882894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 22934487 - 22934558
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
    |||||||  ||||||||||||||||||||   ||||||| |||||||| ||||| |||||||||| ||||||    
T  22934487 ttctttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaacctaattt 22934558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 24969882 - 24969840
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  24969882 aaaccataagcaaacgataaagtgagaagagaaacaaacacac 24969840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 33989965 - 33989867
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||| ||| | || |||| |||||||||||||||| ||||   ||||||| |||||||| ||||| |||||||||| || |||||    
T  33989965 atctctccaatccactattaacgagttatttacaaagagatacaaaaggattacaagaaattagcttcaacaaactctctaagaacaaacctagtttct 33989867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 48142327 - 48142369
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  48142327 aaaccacaatcaaaagataaagagagaagagaaacaaacacac 48142369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 48893593 - 48893631
Alignment:
Q  110 cacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48893593 cacaagcaaaagataaagagagaagagaaacaaacacac 48893631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 4588047 - 4587978
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| |||||||||||  ||||||||||| | |||||||||||    
T  4588047 aaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatcttaatttctacc 4587978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 9927506 - 9927606
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  9927506 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 9927604  T
Q  303 cc 304  Q
    ||    
T  9927605 cc 9927606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 24969232 - 24969132
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||||  |||||||||    
T  24969232 atctctccaatccactatcaattagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaatttcta 24969134  T
Q  303 cc 304  Q
    ||    
T  24969133 cc 24969132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 29056603 - 29056534
Alignment:
Q  80 taatctagtaaccaagtataaaacacaaa-ccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||| || |||||  |||||||||| |||||| |||||||||||| || |||||||||||||||||    
T  29056603 taatctaggaatcaagtgaaaaacacaaaaccacaaacaaaagataaagagaaaagagaaacaaacacac 29056534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 36994644 - 36994544
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  36994644 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttcta 36994546  T
Q  303 cc 304  Q
    ||    
T  36994545 cc 36994544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 54199954 - 54200054
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||| | |||||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  54199954 atctctctaattcactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 54200052  T
Q  303 cc 304  Q
    ||    
T  54200053 cc 54200054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 21703771 - 21703827
Alignment:
Q  92 caagtataaaacacaaac-cacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    ||||| |||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  21703771 caagtgtaaaacacaaaatcacaagcaaaatataaagagagaagagaaacaaacaca 21703827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 50262781 - 50262845
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttc 300  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||    
T  50262781 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccgtaatttc 50262845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 52467434 - 52467502
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||| |||||||   | ||||| |||||||||||| |||||||||||| |||||||||||    
T  52467434 aaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaacctaatttctacc 52467502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 54883108 - 54883040
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||| ||||| | |||||||||||    
T  54883108 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacc 54883040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 55085445 - 55085513
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| || ||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  55085445 aaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacc 55085513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 6677565 - 6677506
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaa 287  Q
    ||||||| ||||| |||||||||||||||   ||||||| |||||||||||||| |||||    
T  6677565 ttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaa 6677506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 16420844 - 16420903
Alignment:
Q  4 atgtgtggagcaaaaggaagtagtaaccagtatcgttgtagcctgaagcaacaacaacaa 63  Q
    |||||||||| |||||||||||||||||  ||||   ||||||| |||||||||||||||    
T  16420844 atgtgtggagtaaaaggaagtagtaaccgatatcaaagtagcctcaagcaacaacaacaa 16420903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 304
Target Start/End: Original strand, 38811200 - 38811337
Alignment:
Q  165 agttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaatt 264  Q
    ||||||| |||| ||| ||||||  |||| ||||||| |||||||| ||||||||||||  | |  |||| ||||| |||||||| ||| |||  |||||    
T  38811200 agttcggtccaacaatgacctactcttgg-ggagagagatctctccgcttcactatcaatgagtcatttacaaaga-atacaaaatggtcactagaaatt 38811297  T
Q  265 agtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |  |||||||| ||||| |||||||||| |||||| ||||    
T  38811298 aaattcaacaaactctccaagaacaaacttaatttgtacc 38811337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 53345313 - 53345254
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaa 287  Q
    ||||||| ||| ||||| |||||||||||   |||||||||||||||||||| |||||||    
T  53345313 ttctttacaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaaagaa 53345254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 2209834 - 2209733
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaa-gggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||| |||||||   ||||||| |||||||||||| ||||||| || | ||||||||    
T  2209834 atctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaccctaatttct 2209736  T
Q  302 acc 304  Q
    |||    
T  2209735 acc 2209733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 4588172 - 4588134
Alignment:
Q  110 cacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  4588172 cacaagcaaaagataaagagagaggagaaacaaacacac 4588134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 45687133 - 45687175
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||    
T  45687133 aaaccacaagcaacagataaagagagaaaagaaacaaacacac 45687175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 6656076 - 6655976
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  6656076 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccttaatttcta 6655978  T
Q  303 cc 304  Q
    ||    
T  6655977 cc 6655976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 12745484 - 12745584
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||||||  ||||| || |||||||||| | |||||||||    
T  12745484 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaacaaccctaatttcta 12745582  T
Q  303 cc 304  Q
    ||    
T  12745583 cc 12745584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 34570462 - 34570562
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||  |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  34570462 atctctccaatccactatcaatgagttctt-acaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 34570560  T
Q  303 cc 304  Q
    ||    
T  34570561 cc 34570562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 37740745 - 37740645
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||| ||    
T  37740745 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttata 37740647  T
Q  303 cc 304  Q
    ||    
T  37740646 cc 37740645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 40632565 - 40632465
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||  ||||||   ||||||| |||||||||||| ||||||||||   |||||||||    
T  40632565 atctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttcta 40632467  T
Q  303 cc 304  Q
    ||    
T  40632466 cc 40632465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 26364324 - 26364256
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  26364324 aaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 26364256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 37229672 - 37229712
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacac 146  Q
    |||||| ||| ||||||||||| ||||||||||||||||||    
T  37229672 aaaccataagtaaaagataaagagagaagagaaacaaacac 37229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 46147471 - 46147539
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| ||| |||||| | |||||||||||    
T  46147471 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacc 46147539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 47038514 - 47038558
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  47038514 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 47038558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 48142450 - 48142514
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    ||||||| ||||||||| | |||||||||   ||| ||| |||||||||||| ||||||||||||    
T  48142450 ttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaac 48142514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 302
Target Start/End: Original strand, 25490978 - 25491114
Alignment:
Q  166 gttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaatta 265  Q
    ||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||||  | ||||||| ||||||||||||||||  ||    |||| |    
T  25490978 gttcgacccaataatgaactatgtttggaggagagagatctctccacttcactatcaatgatttctttacaaagagatacaaaaggagtataagaaatca 25491077  T
Q  266 gtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    | ||||||||||||||||||||||||| |||||||||    
T  25491078 gcttcaacaagctctcaaagaacaaacctaatttcta 25491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 24635390 - 24635277
Alignment:
Q  191 tggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaa 290  Q
    ||||||||||| || | || |||||||||||||  ||||  ||||||||||||||||||  |||||  |||||||| |||||||| ||||| ||||||||    
T  24635390 tggaggagagagatatatcgacttcactatcaatgaattgattataaagagatacaaaatagttacaaaaaattagcttcaacaaactctccaagaacaa 24635291  T
Q  291 acataatttctacc 304  Q
    || |||||||||||    
T  24635290 acttaatttctacc 24635277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 46173477 - 46173377
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  ||||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  46173477 atctctccaatccactatcaatgaattctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 46173379  T
Q  303 cc 304  Q
    ||    
T  46173378 cc 46173377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 20937744 - 20937676
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||  |||||||||||||| || |||||||||||||||||||    
T  20937744 aaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacc 20937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 46860562 - 46860494
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||||| |||||||||||    
T  46860562 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacc 46860494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 54739004 - 54739102
Alignment:
Q  206 tctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaaca-taatttctacc 304  Q
    |||||| | |||||||||  | ||||||| | ||||||| ||||| ||||| |||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  54739004 tctccaatccactatcaatgagttctttacagagagatataaaagagttacataaa-ttagtttcaacaagctcacaaagaacaaacactaatttctacc 54739102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 23391860 - 23391902
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  23391860 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 23391902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 29196337 - 29196379
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  29196337 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 29196379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 31314662 - 31314620
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31314662 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 31314620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 2074999 - 2075068
Alignment:
Q  80 taatctagtaaccaagtataaaacacaaa-ccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||| || |||||  |||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  2074999 taatctaggaaacaagtgaaaaacacaaaaccacaagcaaaagataaagagagaagagaaataaacacac 2075068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 8166507 - 8166604
Alignment:
Q  206 tctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctac 303  Q
    ||||| ||||||||||||| | ||||||| |||||||||||||| |||||    | ||||  |||||||| ||||| |||||||||| ||||||||||    
T  8166507 tctccgcttcactatcaacaagttctttacaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacctaatttctac 8166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 21350955 - 21350996
Alignment:
Q  107 aaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  21350955 aaccacaagcataagataaagtgagaagagaaacaaacacac 21350996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 9666417 - 9666459
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  9666417 aaaccacaagcaaaagataaagagataagagaaacaaacacac 9666459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 16499246 - 16499204
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  16499246 aaaccacaagcaaaagataaagagagaagagaaacaaatacac 16499204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 32891224 - 32891123
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaac-aaacataatttct 301  Q
    ||||||||| | |||||||||| | ||||| | ||||||||||||| | |||||   ||||||| |||||||||||| |||||||| |||| ||||||||    
T  32891224 atctctccaatccactatcaacgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttct 32891126  T
Q  302 acc 304  Q
    |||    
T  32891125 acc 32891123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 32891321 - 32891279
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  32891321 aaaccacaagcaaaagataaggagagaagagaaacaaacacac 32891279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 44700430 - 44700472
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  44700430 aaaccacaagcaaaggataaagagagaagagaaacaaacacac 44700472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 49199517 - 49199618
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaa-gggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | ||||||||    
T  49199517 atctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttct 49199615  T
Q  302 acc 304  Q
    |||    
T  49199616 acc 49199618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 54593824 - 54593727
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | ||||||||    
T  54593824 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccctaatttct 54593727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 5433948 - 5434025
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttctacc 304  Q
    ||||||| ||||||||| |||||||||||   ||||||| || ||||||||| ||||||||||| | |||||||||||    
T  5433948 ttctttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctacc 5434025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 7762385 - 7762285
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||||| |||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  7762385 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 7762287  T
Q  303 cc 304  Q
    ||    
T  7762286 cc 7762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 22835050 - 22835150
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||    
T  22835050 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 22835148  T
Q  303 cc 304  Q
    ||    
T  22835149 cc 22835150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 29682479 - 29682379
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||| ||   ||||||| || ||||||||| ||||||||||||||||||||||    
T  29682479 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaacataatttcta 29682381  T
Q  303 cc 304  Q
    ||    
T  29682380 cc 29682379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 30236245 - 30236145
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||  ||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  30236245 atctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 30236147  T
Q  303 cc 304  Q
    ||    
T  30236146 cc 30236145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 34491332 - 34491232
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  34491332 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 34491234  T
Q  303 cc 304  Q
    ||    
T  34491233 cc 34491232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 35138765 - 35138854
Alignment:
Q  215 cactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||  | ||||||| ||||||||||||||| ||| |   ||||||  |||||||| ||| | ||||||||||||||||||||||    
T  35138765 cactatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacc 35138854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 40735503 - 40735403
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||  ||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  40735503 atctctccaatccactatcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaaccctaatttcta 40735405  T
Q  303 cc 304  Q
    ||    
T  40735404 cc 40735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 51352084 - 51352125
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  51352084 aaaccacaagtaaaagataaagagagaagagaaacaaacaca 51352125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 5236536 - 5236604
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  5236536 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 5236604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 7764598 - 7764484
Alignment:
Q  191 tggaggagaga--catctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaac 288  Q
    |||||||||||  |||||||||| | |||||||||  | ||||| | ||||||||||||||| |||||   ||||||| || |||||| || ||||||||    
T  7764598 tggaggagagattcatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaac 7764500  T
Q  289 aaacataatttctacc 304  Q
    || | |||||||||||    
T  7764499 aaccctaatttctacc 7764484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 304
Target Start/End: Original strand, 19683835 - 19684037
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagaga 201  Q
    |||||||||||||||||||||  ||||    ||||||||||||||||  ||  ||| ||||  ||||||| ||||   | |||||| | |||||||||||    
T  19683835 aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaagattgttcacccagttcggtccaaacttgacctac-tatggaggagaga 19683933  T
Q  202 c--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
       ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | ||||||    
T  19683934 ttgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 19684032  T
Q  300 ctacc 304  Q
    |||||    
T  19684033 ctacc 19684037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 31340281 - 31340349
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | ||||| | ||||||| |||||||||||| |||||||||| |  ||||||||||    
T  31340281 aaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaacaacctcaatttctacc 31340349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 53921454 - 53921497
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacact 149  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||    
T  53921454 aaaccacaaacaaaatataaagagagaagagaaacaaacacact 53921497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 23410280 - 23410322
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||| | ||||||||||||    
T  23410280 aaaccacaagcaaaagataaagagagaatataaacaaacacac 23410322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 27305661 - 27305703
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||  ||||||||||||||||||||    
T  27305661 aaaccacaaacaaaagataaatagagaagagaaacaaacacac 27305703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 32744387 - 32744429
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| || | |||||||||||||||    
T  32744387 aaaccacaagcaaaagataaagagatatgagaaacaaacacac 32744429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 760967 - 760867
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   ||||||| || ||||||||| ||||||||| || |||||||||    
T  760967 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacagacctaatttcta 760869  T
Q  303 cc 304  Q
    ||    
T  760868 cc 760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 761066 - 761022
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  761066 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 5373321 - 5373252
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttctacc 304  Q
    ||||||||| |||||||||||   ||||||| ||||||||||||  |||||||||| | |||||||||||    
T  5373321 aaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttctacc 5373252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 9581402 - 9581302
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| ||||||    ||||||| || ||||||||| |||||||||||| |||||||||    
T  9581402 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 9581304  T
Q  303 cc 304  Q
    ||    
T  9581303 cc 9581302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 39153311 - 39153348
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaa 143  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  39153311 aaaccacaagcacaagataaagggagaagagaaacaaa 39153348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 40734618 - 40734518
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| | |||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  40734618 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaacaaccctaatttcta 40734520  T
Q  303 cc 304  Q
    ||    
T  40734519 cc 40734518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 44331665 - 44331565
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| || ||||   ||||||| |||||||||||| ||| |||||| | |||||||||    
T  44331665 atctctccaatccactatcaataagttctt-acaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttcta 44331567  T
Q  303 cc 304  Q
    ||    
T  44331566 cc 44331565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 44700526 - 44700626
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||  ||||||   ||||||| |||||||| ||| |||||||||| | |||||||||    
T  44700526 atctctccaatccactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttcta 44700624  T
Q  303 cc 304  Q
    ||    
T  44700625 cc 44700626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 45095283 - 45095183
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||    
T  45095283 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta 45095185  T
Q  303 cc 304  Q
    ||    
T  45095184 cc 45095183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 5258224 - 5258292
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  5258224 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 5258292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 5260403 - 5260471
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  5260403 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 5260471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 9636210 - 9636274
Alignment:
Q  240 agatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||   ||||||||||  ||||| || |||||||||| | |||||||||||    
T  9636210 agatacaaaagggttacaagaaattagttttgacaagttcacaaagaacaaccctaatttctacc 9636274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 23410433 - 23410477
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| || ||||||||| ||||||| ||||||||||||||||    
T  23410433 aaattagcttaaacaagctcacaaagaataaacataatttctacc 23410477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 29810988 - 29810889
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || ||||||||||   |||||||||    
T  29810988 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaactctaatttcta 29810890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 29813151 - 29813083
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||| |||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  29813151 aaagagatgcaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 29813083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 37408546 - 37408478
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  37408546 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 37408478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 39153437 - 39153509
Alignment:
Q  232 ttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||| |||||||| | |||||   ||||||| || ||||||||| ||| |||||||| |||||||||||    
T  39153437 ttataaagggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaacaaacctaatttctacc 39153509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 43401906 - 43401950
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  43401906 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 43401950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 45095393 - 45095365
Alignment:
Q  98 taaaacacaaaccacaagcaaaagataaa 126  Q
    |||||||||||||||||||||||||||||    
T  45095393 taaaacacaaaccacaagcaaaagataaa 45095365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 47304307 - 47304271
Alignment:
Q  268 ttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||| |||||||||| |||||||||||||    
T  47304307 ttcaacaagctcacaaagaacaaccataatttctacc 47304271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 43363480 - 43363622
Alignment:
Q  164 tagttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaa--gagatacaaaagggttacttaaa 261  Q
    ||||| ||||||| ||| ||| || | ||||||||||| |||| ||||||||||||||||  | || |||| |||  |||||||||||| |||||   ||    
T  43363480 tagtttggcccaacaatgaccaacatatggaggagagagatctatccacttcactatcaatgagttatttacaaatagagatacaaaagagttacaataa 43363579  T
Q  262 attagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  43363580 attagtttcaacaagctctccaagaacaaacctaatttctacc 43363622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 40808908 - 40808763
Alignment:
Q  4 atgtgtggagcaaaaggaa-gtagtaaccagtatcgttgtagcctgaagcaacaacaacaaatgacagacttggatataatctagtaaccaagtataaaa 102  Q
    ||||||||||||||||||| |||||||| | ||||   |||  || |||||||||||| || | |||||| | | | |||||||| | |||||| |||||    
T  40808908 atgtgtggagcaaaaggaaagtagtaacaaatatcaaagtattctcaagcaacaacaataa-taacagacctaggtttaatctaggacccaagtgtaaaa 40808810  T
Q  103 cacaaa-ccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||| |||||||||||||||| || ||||| ||||||||||||||    
T  40808809 cacaaaaccacaagcaaaagatatagagagaaaagaaacaaacacac 40808763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 6432091 - 6431991
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||| | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  6432091 atctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaatcctaatttcta 6431993  T
Q  303 cc 304  Q
    ||    
T  6431992 cc 6431991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 22270093 - 22269993
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | ||||||||| || ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  22270093 atctctccaatccactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 22269995  T
Q  303 cc 304  Q
    ||    
T  22269994 cc 22269993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 5116725 - 5116625
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| |||||||||||  | ||||||| |||||||||||||||| ||||   ||||||  |||||||| || || |||||||||| |||||||||    
T  5116725 atctctccaattcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaacctaatttcta 5116626  T
Q  303 c 303  Q
    |    
T  5116625 c 5116625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 1113874 - 1113832
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  1113874 aaaccacaagcaaaagataaagggagaagagaaacaaacacac 1113832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 12097818 - 12097860
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  12097818 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 12097860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 23565109 - 23565210
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaa-acataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||||| |||||   |||||||||||||||||||| |||||||||| || ||||||||    
T  23565109 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacctaatttct 23565207  T
Q  302 acc 304  Q
    |||    
T  23565208 acc 23565210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 24525453 - 24525495
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24525453 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 24525495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 36146359 - 36146401
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  36146359 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 36146401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 4253609 - 4253678
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttctacc 304  Q
    ||||||||| ||||||||||| | ||||||| |||||||||||| ||||||||||| | |||||||||||    
T  4253609 aaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttctacc 4253678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 26417436 - 26417336
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||| | ||||| | ||||||||||||| |||||||   ||||||  |||||||||||| |||||||||| | |||||||||    
T  26417436 atctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaaccctaatttcta 26417338  T
Q  303 cc 304  Q
    ||    
T  26417337 cc 26417336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 2390370 - 2390302
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  2390370 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 2390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 8153559 - 8153517
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  8153559 aaaccacaagcaaaagataaagagagaagagaaataaacacac 8153517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 23565013 - 23565055
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  23565013 aaaccacaagcaaaagataaatagagaagagaaacaaacacac 23565055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 36574415 - 36574508
Alignment:
Q  54 acaacaacaaatgacagacttggatataatctagtaaccaagtataaaacacaaa-ccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||| | ||| |||| ||| |||||||| || |||||  |||||||||| ||||||| ||||||||||| ||||||| |||||||||||    
T  36574415 acaacaacaa-taacaaacttagatctaatctaggaatcaagtgaaaaacacaaaaccacaagaaaaagataaagagagaagaaaaacaaacaca 36574508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 36574575 - 36574665
Alignment:
Q  215 cactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttctacc 304  Q
    |||||||||  | ||||||| ||||||||| |||||||||||   ||||||| |||||||| ||| ||||||||||| | |||||||||||    
T  36574575 cactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttctacc 36574665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 41317385 - 41317427
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  41317385 aaaccacaagcaaaagataaagagagaggagaaacaaacacac 41317427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 496031 - 496131
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| ||||||||||||||| ||||| |   ||||||| |||||||||||| |||||||| | | |||||||||    
T  496031 atctctccaatccactatcaatgagttctt-ataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaactaccctaatttcta 496129  T
Q  303 cc 304  Q
    ||    
T  496130 cc 496131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 4586281 - 4586181
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||| ||| |||||||  |||||||| ||||||||| || |||||||||| | |||||||||    
T  4586281 atctctccaatccactatcaatgagttctt-acaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaaccctaatttcta 4586183  T
Q  303 cc 304  Q
    ||    
T  4586182 cc 4586181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 18396438 - 18396338
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaac-aaacataatttct 301  Q
    ||||||||| | | |||||||  ||||||||||||||||||||||||  |||||  |||| ||| |||||||| ||||| |||||| |||| ||||||||    
T  18396438 atctctccaatcctctatcaatgaattctttataaagagatacaaaa-tgttacaaaaaaataggttcaacaaactctccaagaacaaaacctaatttct 18396340  T
Q  302 ac 303  Q
    ||    
T  18396339 ac 18396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 30024780 - 30024880
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| ||| |||||| | |||||||||    
T  30024780 atctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttcta 30024878  T
Q  303 cc 304  Q
    ||    
T  30024879 cc 30024880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 43864337 - 43864264
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  43864337 tttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 43864264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 47673991 - 47674091
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  47673991 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 47674089  T
Q  303 cc 304  Q
    ||    
T  47674090 cc 47674091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 48491699 - 48491599
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||||  ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  48491699 atctctccaatccactatcaatgagttctttc-aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 48491601  T
Q  303 cc 304  Q
    ||    
T  48491600 cc 48491599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 2361052 - 2361120
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  2361052 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 2361120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 4510624 - 4510696
Alignment:
Q  232 ttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||||||| |||||||   ||||||| ||||| || ||| |||||||||| | |||||||||||    
T  4510624 ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaaccttaatttctacc 4510696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 4512466 - 4512538
Alignment:
Q  232 ttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||||||| |||||||   ||||||| ||||| || ||| |||||||||| | |||||||||||    
T  4512466 ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaaccttaatttctacc 4512538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 22328471 - 22328527
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    ||||||||||||||| |||||   ||||||| |||||||||||| ||||||||||||    
T  22328471 aaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaac 22328527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 27347905 - 27347837
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  27347905 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaatcctaatttctacc 27347837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 29608825 - 29608757
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  29608825 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 29608757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 31733049 - 31733117
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||| ||||||| |||||||||| | |||||||||||    
T  31733049 aaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaaccctaatttctacc 31733117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 48489519 - 48489451
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||| | ||||||||||| | |||||||||||    
T  48489519 aaagagatacaaatgggttacaagaaattagcttcaacaagttttcaaagaacaaccctaatttctacc 48489451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 48599414 - 48599482
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  48599414 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 48599482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 4508786 - 4508853
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctac 303  Q
    ||||||||||||| |||||||   ||||||| ||||| |||||| |||||||||| | ||||||||||    
T  4508786 aaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaacaaccctaatttctac 4508853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 304
Target Start/End: Original strand, 8359325 - 8359465
Alignment:
Q  165 agttcggcccaataataacctacgtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaa-gggttacttaaa 261  Q
    ||||||| |||| ||| |||||| | |||||||||||   ||||||||| | |||||||||  | ||||| | |||||||||||||| |||||||   ||    
T  8359325 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaa 8359422  T
Q  262 attagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||| ||||||||| ||||||| || | |||||||||||    
T  8359423 attagtttaaacaagctcacaaagaaaaaccctaatttctacc 8359465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 304
Target Start/End: Original strand, 13065363 - 13065546
Alignment:
Q  118 aaagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagagacatctctccacttcac 217  Q
    |||||||||  |||||||||||||||||||| || ||||| ||||  | |||| |  || |||||||||||| | ||||||||| || |||| |||| |     
T  13065363 aaagataaaaagagaagagaaacaaacacaccgagatttgttcacccaattcgacataacaataacctacgtatagaggagagagatatctctactttat 13065462  T
Q  218 tatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||| ||    |||||||  |  |||||||||| ||||||   |||||||||||||||| |||||||||  ||| | |||||||||||    
T  13065463 tat-aagagtttctttacta--agatacaaaacggttacaataaattagtttcaacaaactctcaaagtgcaatcctaatttctacc 13065546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 1113745 - 1113679
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||||||| ||||||    ||||||| |||||||||||| |||||||||| | |||||||||    
T  1113745 aaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 1113679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 304
Target Start/End: Complemental strand, 23555276 - 23555060
Alignment:
Q  93 aagtataaaacacaa-accacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctac 187  Q
    ||||| ||||||||| |||||||||||||||||||  ||||    |||||||||||||||   ||  ||| ||||  ||||||| ||||   | ||||||    
T  23555276 aagtaaaaaacacaataccacaagcaaaagataaaaggagagaagagagaaacaaacacatcaaagattgttcacccagttcggtccaaacttgacctac 23555177  T
Q  188 gtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaag 285  Q
     | |||||||||||   ||||||||| | |||||||||  | ||||| | |||||| |||||||| |||||   ||||||| ||||||||| || |||||    
T  23555176 -tctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaag 23555079  T
Q  286 aacaaacataatttctacc 304  Q
    ||||| | |||||||||||    
T  23555078 aacaaccctaatttctacc 23555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 31519116 - 31519078
Alignment:
Q  110 cacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  31519116 cacaagcaaaagataaagaaagaagagaaacaaacacac 31519078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 5514112 - 5514157
Alignment:
Q  259 aaaattagtttcaacaagctctcaaagaac-aaacataatttctac 303  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||    
T  5514112 aaaattagcttcaacaagctcacaaagaacaaaacataatttctac 5514157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 41648960 - 41649004
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  41648960 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 41649004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 23793904 - 23793952
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaag 276  Q
    ||||||||||||||||||||||  |||||| ||| |||| |||||||||    
T  23793904 ttctttataaagagatacaaaatagttactaaaagttagcttcaacaag 23793952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 31105477 - 31105541
Alignment:
Q  240 agatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||| |||||||   ||||||| |||||||||||| ||||||| |||  |||||||||||    
T  31105477 agatacaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaatctaatttctacc 31105541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 31518883 - 31518815
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||| ||| ||||| |||||| |||||||||||| |||||||||||    
T  31518883 aaagagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacctaatttctacc 31518815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 35854002 - 35853934
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  35854002 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 35853934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 40808699 - 40808663
Alignment:
Q  213 ttcactatcaaccaattctttataaagagatacaaaa 249  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  40808699 ttcactatcaacgaattctttacaaagagatacaaaa 40808663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 47676216 - 47676284
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||  || |||||||||| | |||||||||||    
T  47676216 aaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttctacc 47676284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 10700688 - 10700796
Alignment:
Q  195 ggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacat 294  Q
    ||||||| |||||||||||||||||||||  | |||||| |||||||||||||||  |||| | | |||||| |||||||||||||| |||||||||| |    
T  10700688 ggagagagatctctccacttcactatcaatgagttctttttaaagagatacaaaaatgtta-taagaattagcttcaacaagctctctaagaacaaacct 10700786  T
Q  295 aatttctacc 304  Q
    ||||||||||    
T  10700787 aatttctacc 10700796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 129 - 298
Target Start/End: Complemental strand, 32579418 - 32579250
Alignment:
Q  129 gagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaat 228  Q
    ||||||||||||||||||||  | ||||| |||  |||||||||| || ||| |||||||||||||||||||| ||| |||||||||||| ||||  | |    
T  32579418 gagaagagaaacaaacacacc-atatttggtcatctagttcggccaaagaatgacctacgtttggaggagagagatcactccacttcactttcaatgagt 32579320  T
Q  229 tctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatt 298  Q
    | |||| ||||| ||||| ||| |||||   ||||||||||||| |||||||| || || |||| |||||    
T  32579319 tatttacaaagacatacataagagttacaagaaattagtttcaataagctctccaaaaataaacctaatt 32579250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 30802957 - 30802854
Alignment:
Q  195 ggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacat 294  Q
    ||||||| |||||||  ||||| ||||||| | ||||||| ||| |||||||||||| ||||   |||||||||||||||||||| |||||||||||| |    
T  30802957 ggagagagatctctctgcttcattatcaacgagttctttacaaatagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaacct 30802858  T
Q  295 aatt 298  Q
    ||||    
T  30802857 aatt 30802854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 3075706 - 3075806
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| |||||||||||| ||||||| | ||| ||||||||| |||||||   ||||||| |||| ||||||| |||||||||||| |||||||||    
T  3075706 atctctccaattcactatcaacgaattctt-acaaaaagatacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaacctaatttcta 3075804  T
Q  303 cc 304  Q
    ||    
T  3075805 cc 3075806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 316858 - 316782
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||||||| ||||   ||||||| |||||||||||||| |||||||||| |||||||||||    
T  316858 ttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacctaatttctacc 316782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 298
Target Start/End: Complemental strand, 32609693 - 32609561
Alignment:
Q  166 gttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaatta 265  Q
    |||| |||||| ||| |||||||||||||||||||| || | | ||||||| ||||||  | ||||||| ||||| ||||||||| |||||   ||||||    
T  32609693 gttcagcccaagaatgacctacgtttggaggagagagatttatgcacttcaatatcaataagttctttacaaagaaatacaaaagagttacaagaaatta 32609594  T
Q  266 gtttcaacaagctctcaaagaacaaacataatt 298  Q
      |||||||| ||||||||||| |||| |||||    
T  32609593 acttcaacaaactctcaaagaataaacttaatt 32609561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 28278409 - 28278336
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| |||||||||||||    
T  28278409 tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccataatttctacc 28278336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 30793265 - 30793204
Alignment:
Q  195 ggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttac 256  Q
    ||||||| |||||||||||||||||||||  | ||||||| |||||||||||||| ||||||    
T  30793265 ggagagagatctctccacttcactatcaattagttctttacaaagagatacaaaatggttac 30793204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 533857 - 533789
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||  |||||||| |||||||||||| |||||| ||| | |||||||||||    
T  533857 aaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaaccctaatttctacc 533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 304
Target Start/End: Complemental strand, 13239973 - 13239771
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagaga 201  Q
    |||||||||||||||||||||  ||||    ||||||||||||||||  ||| ||| ||||  ||||||| ||||   | |||||| | |||||||||||    
T  13239973 aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaaaattgttcacccagttcggtccaaatttgacctac-tctggaggagaga 13239875  T
Q  202 c--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
       ||||||||| | |||||||||  | ||||| | ||||||||||||||| |||||   ||||||| ||||||||| || ||||||| || | ||||||    
T  13239874 ttgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaaaaaccctaattt 13239776  T
Q  300 ctacc 304  Q
    |||||    
T  13239775 ctacc 13239771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 13695763 - 13695827
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    ||||||| |||||||||||||||||||||   ||||||| || ||||||||| ||||||||||||    
T  13695763 ttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaac 13695827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 16452168 - 16452100
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||||||  ||||||||||| |||||||||||    
T  16452168 aaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaacttaatttctacc 16452100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 33831768 - 33831700
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||||    
T  33831768 aaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacc 33831700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 38747093 - 38747025
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  38747093 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 38747025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 14689484 - 14689575
Alignment:
Q  213 ttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||  |||| |||| ||||||||||||||   ||||  |||||||| |||||||||| ||| | ||||||||||||||||||||    
T  14689484 ttcactaacaataaattatttacaaagagatacaaaaatattacaaaaaattagcttcaacaagcactccatgaacaaacataatttctacc 14689575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 538242 - 538200
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  538242 aaaccacaagcaaaagataaagagagaagagaaagaaacacac 538200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 9299821 - 9299759
Alignment:
Q  86 agtaaccaagtataaaacacaaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||| |||  |||||| |||||||||||||||||| ||||||||||| || |||||    
T  9299821 agtaaccaagtgtaaggcacaaatcacaagcaaaagataaagagagaagagaaataagcacac 9299759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 35616280 - 35616190
Alignment:
Q  213 ttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctac 303  Q
    |||||||||||  | ||||||| ||||| |||||||||||||||   ||||||  || ||| ||||||| |||||||||| ||||||||||    
T  35616280 ttcactatcaatgagttctttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctac 35616190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 213585 - 213485
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| || ||||||||| |||||||||| | |||||||||    
T  213585 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaacaaccctaatttcta 213487  T
Q  303 cc 304  Q
    ||    
T  213486 cc 213485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 13488323 - 13488223
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  13488323 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 13488225  T
Q  303 cc 304  Q
    ||    
T  13488224 cc 13488223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 302
Target Start/End: Original strand, 32583312 - 32583429
Alignment:
Q  185 tacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaa 284  Q
    ||||| ||| |||||||  | ||||| ||||||||||||  | ||||||| ||| ||||||||||| | |||  | |||||| |||||||| || || ||    
T  32583312 tacgtctggtggagagaggtatctccgcttcactatcaatgagttctttacaaaaagatacaaaagagatacacataattagcttcaacaacctttccaa 32583411  T
Q  285 gaacaaacataatttcta 302  Q
    |||||| |||||||||||    
T  32583412 gaacaatcataatttcta 32583429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 42428478 - 42428578
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || ||||||| || |||||||||||    
T  42428478 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaaaaaccataatttcta 42428576  T
Q  303 cc 304  Q
    ||    
T  42428577 cc 42428578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 538113 - 538045
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||| ||| | |||||||||||    
T  538113 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagcaaccttaatttctacc 538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 3326009 - 3325933
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| ||||||||||| || ||||||   ||||||| |||||||||||||  |||||||||  |||||||||||    
T  3326009 ttctttacaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacc 3325933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 39468629 - 39468697
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  39468629 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 39468697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 42310015 - 42310083
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||||| |||||   ||||||| |||||||||||| |||||| ||||| | |||||||||    
T  42310015 aaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagatcaaacttgatttctacc 42310083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 8565897 - 8565940
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagag-aaacaaacacac 148  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  8565897 aaaccacaagcaaaagataaagagagaagagaaaacaaacacac 8565940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 304
Target Start/End: Complemental strand, 25412985 - 25412780
Alignment:
Q  103 cacaaaccacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggag 198  Q
    ||||||||||||||||||||||||  ||||    ||||||||||||||||  ||  ||| ||||  ||||| | ||||   | |||||| | ||||||||    
T  25412985 cacaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaagattgttcacccagttcagtccaaacttgacctac-tctggaggag 25412887  T
Q  199 agac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataa 296  Q
    |||   ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||    
T  25412886 agattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaa 25412788  T
Q  297 tttctacc 304  Q
    ||||||||    
T  25412787 tttctacc 25412780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 10054867 - 10054964
Alignment:
Q  206 tctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||| | |||||||||  | ||| ||| |||||||||||||||| |||    ||||||| |||||||| ||||  ||||||||||||||||||||||    
T  10054867 tctccaatacactatcaatgagttcattacaaagagatacaaaagg-ttataagaaattagcttcaacaaactcttcaagaacaaacataatttctacc 10054964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 13695641 - 13695683
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||    
T  13695641 aaacaacaagcaaaggataaagagagaagagaaacaaacacac 13695683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 16649781 - 16649823
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||  || |||||||||||||||||    
T  16649781 aaaccacaagcaaaagataaacggaaaagagaaacaaacacac 16649823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 16641017 - 16641086
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaaca-taatttctacc 304  Q
    ||||||||||||||| ||||    |||| || |||||||||||| ||||||||||||| |||||||||||    
T  16641017 aaagagatacaaaagagttatcagaaatcagcttcaacaagctcacaaagaacaaacactaatttctacc 16641086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 27637692 - 27637761
Alignment:
Q  236 aaagagatacaaaa-gggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||| |||||||   |||||||||| |||||||||  ||||||||| | |||||||||||    
T  27637692 aaagagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaaccctaatttctacc 27637761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 32636944 - 32636844
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||  ||||| || |||||||||| |||||||||||    
T  32636944 atctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccataatttcta 32636846  T
Q  303 cc 304  Q
    ||    
T  32636845 cc 32636844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 40147381 - 40147281
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| | |||||   ||||||| |||||||||||| | |||||||| | |||||||||    
T  40147381 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaaccctaatttcta 40147283  T
Q  303 cc 304  Q
    ||    
T  40147282 cc 40147281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 304
Target Start/End: Original strand, 19491649 - 19491847
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacactgaaat-ttgatcacatagttcggcccaataataacctacgtttggaggagagac-- 202  Q
    ||||||||| |||||||||||||||||| ||||||||||||||  | || ||| | || |||||||| |||||| | |||||| | ||| ||||| |       
T  19491649 aaaccacaaacaaaagataaagtgagaaaagaaacaaacacaccaagatattgttgacctagttcggtccaata-tgacctac-tatgggggagatattg 19491746  T
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||  | | |||||||||| | ||||| | ||||||||||||| |||||||   |||||||||||||||||||| |||||||||||| |||||||||    
T  19491747 atctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttcta 19491845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 40221865 - 40221765
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||| | ||||| | ||||||||||||| |||||||   |||||||||||||||||||| |||||||||| | |||||||||    
T  40221865 atctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttcta 40221767  T
Q  303 cc 304  Q
    ||    
T  40221766 cc 40221765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 30291825 - 30291783
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  30291825 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 30291783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 30143460 - 30143360
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  30143460 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 30143362  T
Q  303 cc 304  Q
    ||    
T  30143361 cc 30143360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 32902221 - 32902322
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||| | |||||||||||  ||||||||| ||||||||||||||  |||||   ||||||| |||||||   |||| | ||||||||||||||||||    
T  32902221 atctctcaaattcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaacagagtctccatgaacaaacataatttcta 32902320  T
Q  303 cc 304  Q
    ||    
T  32902321 cc 32902322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 40321297 - 40321256
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  40321297 aaaccacaagcaaaagataaagagagaagagaaacaaacaca 40321256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 1292543 - 1292611
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||||| |||||||||||    
T  1292543 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacttaatttctacc 1292611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 7597735 - 7597647
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa 291  Q
    ||||||||| | |||||||||   |||||||| |||||||||||||||| |||    ||||||| |||||||||||||| |||||||||    
T  7597735 atctctccaatccactatcaatgcattctttacaaagagatacaaaaggattataagaaattagcttcaacaagctctccaagaacaaa 7597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 10929863 - 10929819
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  10929863 aaattagcttcaacaagctcacaaagaacaaacataatttctacc 10929819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 18655488 - 18655420
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  18655488 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacc 18655420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 27811366 - 27811298
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  27811366 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 27811298  T

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Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 42435071 - 42435139
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  42435071 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 42435139  T

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Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 41267083 - 41266988
Alignment:
Q  210 cacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaac-aaacataatttctacc 304  Q
    ||||||||||||||  | ||||||| ||||| ||||||||| |||||   |||||||| |||||||| |||| |||||| |||| |||||||||||    
T  41267083 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctacc 41266988  T

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Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 304
Target Start/End: Complemental strand, 42498416 - 42498214
Alignment:
Q  106 aaaccacaagcaaaagataaa--gtgagaagag--aaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggagaga 201  Q
    |||||||||||||||||||||  | ||||||||  ||||||||||||  ||  ||| ||||  ||||||| ||||   | |||||| | |||||||||||    
T  42498416 aaaccacaagcaaaagataaaaggagagaagagggaaacaaacacaccaaagattgttcacccagttcggtccaaacttgacctac-tctggaggagaga 42498318  T
Q  202 c--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
       ||||||||| | |||||||||  | ||||| | ||||| |||||||||||||||   ||||||| ||||||||| || |||||||||| | ||||||    
T  42498317 ttgatctctccaatccactatcaatgagttctt-acaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaattt 42498219  T
Q  300 ctacc 304  Q
    |||||    
T  42498218 ctacc 42498214  T

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Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 1345326 - 1345364
Alignment:
Q  110 cacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1345326 cacaagcaaaagataaagagagaagagaaacaaacacac 1345364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 3073825 - 3073867
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  3073825 aaaccacaagcaaaagataaagagataagagaaacaaacacac 3073867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 3303625 - 3303663
Alignment:
Q  110 cacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3303625 cacaagcaaaagataaagagagaagagaaacaaacacac 3303663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 4743165 - 4743207
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  4743165 aaaccacaagcgaaagataaagagagaagagaaacaaacacac 4743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 40328900 - 40328799
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagg-gttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||| | |||||   |||||||||| ||||||||| |||||||||||| ||||||||    
T  40328900 atctctccaatccactatcaatgagttctt-acaaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaacctaatttct 40328802  T
Q  302 acc 304  Q
    |||    
T  40328801 acc 40328799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 4283644 - 4283544
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||| ||||| | |||||||||    
T  4283644 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttcta 4283546  T
Q  303 cc 304  Q
    ||    
T  4283545 cc 4283544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 4731778 - 4731678
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||| ||| | |||||||||    
T  4731778 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaaccctaatttcta 4731680  T
Q  303 cc 304  Q
    ||    
T  4731679 cc 4731678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 5689488 - 5689447
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  5689488 aaaccacaagtaaaagataaagagagaagagaaacaaacaca 5689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 7597894 - 7597798
Alignment:
Q  45 cctgaagcaacaacaacaaatgacagacttggatataatctagtaaccaagtataaaacacaaacc-acaagcaaaagataaagtgagaagagaaaca 141  Q
    |||||||||||| |||||| | ||| |||| ||| |||| ||| |||||||| ||||||||||| | | || |||||||||||| |||||||||||||    
T  7597894 cctgaagcaacaccaacaa-taacaaacttagatctaatttaggaaccaagtgtaaaacacaaaacgataaacaaaagataaagagagaagagaaaca 7597798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 1822385 - 1822313
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttcta 302  Q
    |||| ||| ||||| |||||||||||   ||||||| |||||||||||| ||||||||||| |||||||||||    
T  1822385 tttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttcta 1822313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 1856830 - 1856758
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttcta 302  Q
    |||| ||| ||||| |||||||||||   ||||||| |||||||||||| ||||||||||| |||||||||||    
T  1856830 tttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttcta 1856758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 3231868 - 3231944
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa-cataatttctac 303  Q
    ||||||| |||||||||||||| |||||   |||||||| |||||||||||| | ||||||||| | ||||||||||    
T  3231868 ttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctac 3231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 3303750 - 3303818
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| || ||||||||| |||||||||||| |||||||||||    
T  3303750 aaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaacttaatttctacc 3303818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 4162585 - 4162517
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  4162585 aaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacctaacttctacc 4162517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 12702714 - 12702782
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  12702714 aaagagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 12702782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 15212874 - 15212806
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  15212874 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 15212806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 1292415 - 1292457
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||| |||||||||||| | ||||||||||||||||||||    
T  1292415 aaaccacgagcaaaagataaggagagaagagaaacaaacacac 1292457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 6599054 - 6598992
Alignment:
Q  242 atacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||||    
T  6599054 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaacttaatttctacc 6598992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 6674507 - 6674445
Alignment:
Q  242 atacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||   ||||||| || ||||||||| |||||||||||| |||||||||||    
T  6674507 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaacttaatttctacc 6674445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 8965642 - 8965684
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||    
T  8965642 aaaccacaaacaaaagataaagagagaaaagaaacaaacacac 8965684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 10015296 - 10015254
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||| | ||||||||||||||| ||||    
T  10015296 aaaccacaagcaaaagataaggagagaagagaaacaaatacac 10015254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 18142035 - 18141993
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||| |||||||||| |||||    
T  18142035 aaaccacaagcaaaagataaagagagcagagaaacaagcacac 18141993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 30291727 - 30291626
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaac-aaacataatttct 301  Q
    ||||||||| | |||||||||  ||||||| | |||| |||||||| | |||||   ||||||| |||||||||||| |||||||| |||| ||||||||    
T  30291727 atctctccaatccactatcaaagaattctt-acaaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttct 30291629  T
Q  302 acc 304  Q
    |||    
T  30291628 acc 30291626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 30909489 - 30909389
Alignment:
Q  201 acatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttc 300  Q
    ||||||||||| |||||||||||| | | | ||| ||||||||||||| | |||||   |||||||||| ||||||||||| ||||  |||| |||||||    
T  30909489 acatctctccaattcactatcaacgagt-cattacaaagagatacaaa-gagttacaagaaattagtttaaacaagctctccaagagtaaacctaatttc 30909392  T
Q  301 tac 303  Q
    |||    
T  30909391 tac 30909389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 6599190 - 6599153
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaa 143  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  6599190 aaaccacaagaaaaagataaagggagaagagaaacaaa 6599153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 6674643 - 6674606
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaa 143  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  6674643 aaaccacaagaaaaagataaagggagaagagaaacaaa 6674606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 10240263 - 10240186
Alignment:
Q  215 cactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    |||||||||  | ||||||| |||||||| ||| | ||||||   ||||||| |||||||||||| ||||||||||||    
T  10240263 cactatcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaac 10240186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 18141940 - 18141841
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| |||||||   ||||||| |||||||||||| |||||||| ||| |||||||||    
T  18141940 atctctccaatccactatcaaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aacctaatttcta 18141843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 29796171 - 29796204
Alignment:
Q  4 atgtgtggagcaaaaggaagtagtaaccagtatc 37  Q
    |||||||||||||||||||||| |||||||||||    
T  29796171 atgtgtggagcaaaaggaagtaataaccagtatc 29796204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 33352270 - 33352170
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||| ||    
T  33352270 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaaccctaattttta 33352172  T
Q  303 cc 304  Q
    ||    
T  33352171 cc 33352170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 1746298 - 1746366
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  1746298 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 1746366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 3899250 - 3899198
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggtta 255  Q
    |||||||||||||||||||||  |||||| || ||||||||| ||||| ||||    
T  3899250 atctctccacttcactatcaaagaattctctacaaagagatataaaagagtta 3899198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 11384073 - 11384005
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||| ||| |||||||||| | |||||||||||    
T  11384073 aaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctacc 11384005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 11712076 - 11712136
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaa 291  Q
    |||| ||||||||| ||||||||| |   ||||||| |||||||||||||||| |||||||    
T  11712076 tttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaa 11712136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 18106026 - 18106058
Alignment:
Q  110 cacaagcaaaagataaagtgagaagagaaacaa 142  Q
    |||||||||||||||||| ||||||||||||||    
T  18106026 cacaagcaaaagataaagagagaagagaaacaa 18106058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 31218345 - 31218277
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  31218345 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 31218277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 41366718 - 41366762
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| || ||||||||  ||||||||||||||||||||||||    
T  41366718 aaattagcttaaacaagcttacaaagaacaaacataatttctacc 41366762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 43036487 - 43036443
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||||||| || |||||||||| | |||||||||||    
T  43036487 aaattagtttcaacaagttcacaaagaacaaccctaatttctacc 43036443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 44353881 - 44353813
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| ||||||||| || |||||||||| | |||||||||||    
T  44353881 aaagagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacc 44353813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 304
Target Start/End: Complemental strand, 41361132 - 41360934
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacactgaaat-ttgatcacatagttcggcccaataataacctacgtttggaggagagac-- 202  Q
    ||||||||| |||||||||||||||||| ||||||||||||||  | || ||| | || |||||||| |||||| | |||||| | ||| ||||| |       
T  41361132 aaaccacaaacaaaagataaagtgagaaaagaaacaaacacaccaagatattgttgacctagttcggtccaata-tgacctac-tatgggggagatattg 41361035  T
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||  | | |||||||||| | ||||| | ||||||||||||| |||||||   |||||||||||||||||||| |||||||||||| |||||||||    
T  41361034 atctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttcta 41360936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 22079437 - 22079336
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | || ||||||  | ||||||| |||||||||||||| ||||||   ||||||| || ||||||||| ||||||||||||||||||||||    
T  22079437 atctctccaatccaatatcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttcta 22079338  T
Q  303 cc 304  Q
    ||    
T  22079337 cc 22079336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 16914218 - 16914324
Alignment:
Q  199 agacatctctccacttcactatcaaccaattctttataaagagatacaaaagggtta-cttaaaattagtttcaacaagctctcaaagaacaaacataat 297  Q
    ||||||| || ||||||||||||||  | ||||||| ||||||||||||||||||||    ||| |||| ||||||| |||||| |||||||||||||||    
T  16914218 agacatccctgcacttcactatcaatgagttctttacaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataat 16914317  T
Q  298 ttctacc 304  Q
    || ||||    
T  16914318 ttttacc 16914324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 1485799 - 1485918
Alignment:
Q  185 tacgtttggaggagagacatctctccacttcactatcaaccaatt-ctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaa 283  Q
    ||||| ||||||||||| || |||| |||||||||||||  | || ||||||||| |||||||||||||||||   ||||||  |||||||||| ||| |    
T  1485799 tacgtctggaggagagagatttctcaacttcactatcaaagagtttctttataaatagatacaaaagggttacaagaaattatattcaacaagcactcca 1485898  T
Q  284 agaacaaacataatttctac 303  Q
    |||| || | ||||||||||    
T  1485899 agaaaaatcctaatttctac 1485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 4535522 - 4535629
Alignment:
Q  197 agagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataa 296  Q
    ||||| |||||||||||| ||||||||  | ||||||| ||||||||||||||  |||||   |||||   ||||| |||||||| |||||||||| |||    
T  4535522 agagagatctctccacttaactatcaatgagttctttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaa 4535621  T
Q  297 tttctacc 304  Q
    ||||||||    
T  4535622 tttctacc 4535629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 25652200 - 25652106
Alignment:
Q  210 cacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||||  | ||||||| |||||||||||| || |||||   ||||||| |||||||| |||||||| |||| || |||||||||||    
T  25652200 cacttcactatcaaagagttctttacaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctacc 25652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 40122147 - 40122189
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  40122147 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 40122189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 46065135 - 46065093
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  46065135 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 46065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 304
Target Start/End: Original strand, 47255349 - 47255488
Alignment:
Q  165 agttcggcccaataataacctacgtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaa 262  Q
    ||||||| |||| ||| |||||| | |||||||||||   ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   |||    
T  47255349 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaa 47255446  T
Q  263 ttagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||||||| |||||||||| | |||||||||||    
T  47255447 ttagcttcaacaagctcacaaagaacaaccctaatttctacc 47255488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 50167126 - 50167168
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  50167126 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 50167168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 50169161 - 50169203
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  50169161 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 50169203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 3460792 - 3460715
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac-ataatttctacc 304  Q
    ||||||| ||||| |||||||||||||||   ||||||| |||||||||||| ||||||||||||  |||||||||||    
T  3460792 ttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttctacc 3460715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 11348818 - 11348718
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  11348818 atctctccaatccactatcaatgagttctt-agaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 11348720  T
Q  303 cc 304  Q
    ||    
T  11348719 cc 11348718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 13137927 - 13137968
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  13137927 aaaccacaagcaaaagataaagagagaagagaaacaaacaca 13137968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 13549048 - 13549148
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| ||||||| | ||||||| || ||||||||| |||||||||| | |||||||||    
T  13549048 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaaccctaatttcta 13549146  T
Q  303 cc 304  Q
    ||    
T  13549147 cc 13549148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 12318532 - 12318671
Alignment:
Q  164 tagttcggcccaataataacctacgtttggaggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaat 263  Q
    |||||||| |||||||| | |||| | ||| ||||||| |||||||  ||||| ||||||  | ||||| |  |||| |||||||| ||||||   ||||    
T  12318532 tagttcggtccaataatgaactac-tatgggggagagagatctctctgcttcagtatcaatgagttcttaaagaagacatacaaaatggttacaagaaat 12318630  T
Q  264 tagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||| |||||||||||||| | |||||||| |||||||||||    
T  12318631 tagcttcaacaagctctccatgaacaaacctaatttctacc 12318671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 918652 - 918597
Alignment:
Q  80 taatctagtaaccaagtataaaacacaaaccacaagcaaaagataaagtgagaaga 135  Q
    ||||||||||||||||| ||||||||||| ||||| |||||| ||||| |||||||    
T  918652 taatctagtaaccaagtgtaaaacacaaatcacaaacaaaagttaaagagagaaga 918597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 10925343 - 10925245
Alignment:
Q  206 tctccacttcactatcaaccaattctt--tataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    |||||| | |||||||||  |||||||  || ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||| |||||||||||    
T  10925343 tctccaatccactatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccataatttcta 10925245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 927927 - 927969
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  927927 aaaccacaaacaaaagataaagagagaagagaaacaaacacac 927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 6808573 - 6808479
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataat 297  Q
    ||||||||| | |||||| ||  | ||||||| ||||||||||||||| |||||   || |||| |||||||||||||| |||||||||| ||||    
T  6808573 atctctccaatccactataaatgagttctttacaaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacctaat 6808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 7482278 - 7482379
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaa-gggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| |||||||||||  | ||||| | |||||||||||||| |||||||   ||||||| || ||||||||| |||||||||| | ||||||||    
T  7482278 atctctccaattcactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttct 7482376  T
Q  302 acc 304  Q
    |||    
T  7482377 acc 7482379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 9109467 - 9109565
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | ||||||||||   ||||||| |||||||||||||||||||||   ||||||  ||||||||| |||| ||| | |||| ||||||||    
T  9109467 atctctccaatacactatcaacgtgttctttacaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagtaaaaacttaatttct 9109565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 13659287 - 13659329
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  13659287 aaaccacaagcaaaagataaagagagaagagaaacaaatacac 13659329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 28265505 - 28265547
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  28265505 aaaccacaaccaaaagataaagagagaagagaaacaaacacac 28265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 37559916 - 37560017
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattag-tttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| |||||||||||| | ||| ||| ||||||||||||| |||||||   ||||||| |||||||||| || ||||||||||   ||||||||    
T  37559916 atctctccaattcactatcaacgagttc-ttacaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaactctaatttct 37560014  T
Q  302 acc 304  Q
    |||    
T  37560015 acc 37560017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 928051 - 928112
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    |||| |||||||| ||||||||||||   ||||||| |||||||||||| ||||||||||||    
T  928051 tttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaac 928112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 3156985 - 3156885
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  3156985 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 3156887  T
Q  303 cc 304  Q
    ||    
T  3156886 cc 3156885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 3460913 - 3460872
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  3460913 aaaccacaaacaaaagataaagagagaagagaaacaaacaca 3460872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 5460124 - 5460083
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  5460124 aaaccacaagcaaaagataaagagagaatagaaacaaacaca 5460083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 10925443 - 10925402
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacaca 147  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  10925443 aaaccacaagcaaaagataaagagagaagataaacaaacaca 10925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 13547137 - 13547237
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||| ||| |||||||||||| |||||||||| | |||||||||    
T  13547137 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaaccctaatttcta 13547235  T
Q  303 cc 304  Q
    ||    
T  13547236 cc 13547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 19754615 - 19754515
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||  ||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  19754615 atctctccaatccactatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 19754517  T
Q  303 cc 304  Q
    ||    
T  19754516 cc 19754515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 28220274 - 28220374
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  28220274 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 28220372  T
Q  303 cc 304  Q
    ||    
T  28220373 cc 28220374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 28265602 - 28265702
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| ||| |||||| | |||||||||    
T  28265602 atctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttcta 28265700  T
Q  303 cc 304  Q
    ||    
T  28265701 cc 28265702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 31659358 - 31659258
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||  | |||||||||    
T  31659358 atctctccaatccactatcaataagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacagccctaatttcta 31659260  T
Q  303 cc 304  Q
    ||    
T  31659259 cc 31659258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 49918470 - 49918370
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| || |||||||||| | |||||||||    
T  49918470 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 49918372  T
Q  303 cc 304  Q
    ||    
T  49918371 cc 49918370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 4552717 - 4552785
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||| |||||||   ||||||| |||||||||||| ||||| |||||| |||||||||||    
T  4552717 aaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacctaatttctacc 4552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 15820395 - 15820327
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||||| |||||| ||||    
T  15820395 aaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttttacc 15820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 19752774 - 19752706
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||  ||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  19752774 aaagagatacaaatcggttacaagaaattagcttcaacaagctcgcaaagaacaaccctaatttctacc 19752706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 37282764 - 37282828
Alignment:
Q  228 ttctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaac 292  Q
    ||||||| |||||||| ||||||||||||   ||||||| |||||||||||| ||| ||||||||    
T  37282764 ttctttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaaac 37282828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 16455838 - 16455796
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||    
T  16455838 aaaccacaagtaaaagataaagagagaagagaaacaaatacac 16455796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 16914126 - 16914168
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||    
T  16914126 aaaccgcaagcaaaagataaagagagaagagacacaaacacac 16914168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 23555217 - 23555255
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaac 144  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  23555217 aaaccacaagcaaaacataaagagagaagagaaacaaac 23555255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 37168418 - 37168317
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaa-gggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||| |||||||   ||||||| || ||||||||| |||||||||| | ||||||||    
T  37168418 atctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttct 37168320  T
Q  302 acc 304  Q
    |||    
T  37168319 acc 37168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 45644305 - 45644347
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||| |||||||||||| |||||||||||||| |||||    
T  45644305 aaaccacaaacaaaagataaagagagaagagaaacaagcacac 45644347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 47115265 - 47115191
Alignment:
Q  231 tttataaagagatacaaaa-gggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| |||||||||||||| |||||||   ||||||| || ||||||||| |||||||||| | |||||||||||    
T  47115265 tttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacc 47115191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 834116 - 834160
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  834116 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 834160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 3847070 - 3847114
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  3847070 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 3847114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 6398851 - 6398746
Alignment:
Q  119 aagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttgg-aggagagacatctctccacttcac 217  Q
    ||||||||| ||| |||| ||||||||||||  |||||||| |   |||||||||||| ||| ||||| ||||||  || |||| | ||||||| |||||    
T  6398851 aagataaagagagtagaggaacaaacacactacaatttgattatccagttcggcccaacaatgacctatgtttggtgggggagagagctctccaattcac 6398752  T
Q  218 tatcaa 223  Q
    ||||||    
T  6398751 tatcaa 6398746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 8550835 - 8550935
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||| |||||||| | |||||   ||||||| || ||||||||| |||||||||||| |||||||||    
T  8550835 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 8550933  T
Q  303 cc 304  Q
    ||    
T  8550934 cc 8550935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 24215189 - 24215148
Alignment:
Q  182 acctacgtttggaggagagacatctctccacttcactatcaa 223  Q
    |||||||| ||||||||||| ||||||||| |||||||||||    
T  24215189 acctacgtctggaggagagagatctctccaattcactatcaa 24215148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 28223469 - 28223569
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||| ||  ||||| ||| |||||||||||    
T  28223469 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatcaaccataatttcta 28223567  T
Q  303 cc 304  Q
    ||    
T  28223568 cc 28223569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 31925755 - 31925855
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| ||| |||||  | |||||||||    
T  31925755 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacatccctaatttcta 31925853  T
Q  303 cc 304  Q
    ||    
T  31925854 cc 31925855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 36683892 - 36683855
Alignment:
Q  111 acaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  36683892 acaagcaaaagataaagagagaagacaaacaaacacac 36683855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 41135949 - 41135840
Alignment:
Q  195 ggagagacatctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacat 294  Q
    ||||||| |||||||  ||||| ||||||| | ||||||| ||| |||||||||||| ||||   ||||||  ||||| ||| |||  |||||||||  |    
T  41135949 ggagagagatctctctgcttcagtatcaacgagttctttacaaatagatacaaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatct 41135850  T
Q  295 aatttctacc 304  Q
    ||||||||||    
T  41135849 aatttctacc 41135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 44455280 - 44455180
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||| ||||||||| | |||||   ||||||||||||||||| || |||||||||| | |||||||||    
T  44455280 atctctccaatccactatcaatgagttctt-acaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttcta 44455182  T
Q  303 cc 304  Q
    ||    
T  44455181 cc 44455180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 13316432 - 13316500
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  13316432 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 13316500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 23555369 - 23555413
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||||||| || |||||||||| | |||||||||||    
T  23555369 aaattagtttcaacaagttcacaaagaacaaccctaatttctacc 23555413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 29136311 - 29136267
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  29136311 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 29136267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 37033177 - 37033221
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  37033177 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 37033221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 37879015 - 37879059
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  37879015 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 37879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 42298055 - 42298123
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||| ||||| | |||||||||||    
T  42298055 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacc 42298123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 303
Target Start/End: Original strand, 490368 - 490468
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    |||||||| ||||||||||||  | | ||||| ||||| ||||||||| |||||   ||||||| |||||||||||||| |||||||||| |||||||||    
T  490368 atctctccgcttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaatttcta 490467  T
Q  303 c 303  Q
    |    
T  490468 c 490468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 434621 - 434553
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  434621 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 434553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 2972987 - 2973087
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||||| |||||||||    
T  2972987 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttcta 2973085  T
Q  303 cc 304  Q
    ||    
T  2973086 cc 2973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 304
Target Start/End: Original strand, 3808711 - 3808857
Alignment:
Q  159 tcacatagttcggcccaataataacctacgtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaa-gggtta 255  Q
    |||| |||||||| ||||| || |||||| | |||||||||||   ||||||||| | |||||||||  | ||||| | |||||||||||||| ||||||    
T  3808711 tcacctagttcggtccaatcatgacctac-tctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggtta 3808808  T
Q  256 cttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |   |||||||||||||||||||| |||||||||| | |||||||||||    
T  3808809 caagaaattagtttcaacaagctcacaaagaacaaccctaatttctacc 3808857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 17758143 - 17758043
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  17758143 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 17758045  T
Q  303 cc 304  Q
    ||    
T  17758044 cc 17758043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 21589051 - 21588951
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  21589051 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 21588953  T
Q  303 cc 304  Q
    ||    
T  21588952 cc 21588951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 21593784 - 21593684
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||    
T  21593784 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 21593686  T
Q  303 cc 304  Q
    ||    
T  21593685 cc 21593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 12221155 - 12221247
Alignment:
Q  207 ctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataattt 299  Q
    |||||||||||| ||||  ||||||||| |||| |||||||||| |||||  ||||||||||||||| |  |||  |||||||||| ||||||    
T  12221155 ctccacttcactgtcaattaattctttacaaagtgatacaaaagagttacaaaaaattagtttcaacgaattcttcaagaacaaacctaattt 12221247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 5043715 - 5043648
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctac 303  Q
    ||||||||||||| | |||||   ||||||| |||||||||||| |||||||||||| ||||||||||    
T  5043715 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctac 5043648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 33211136 - 33211175
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaaca 145  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  33211136 aaaccacaagcaaaagataaagagagaagagaaacaaaca 33211175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 3038874 - 3038916
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  3038874 aaaccacaagcaaaagataaagagagaaaagaaacaaacacac 3038916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 603139 - 603222
Alignment:
Q  206 tctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaa 290  Q
    |||||| | |||||||||| | ||||| | ||||||||||||| |||||||   ||||||| |||||||||||| ||||||||||    
T  603139 tctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 603222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 5413338 - 5413542
Alignment:
Q  103 cacaaaccacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggag 198  Q
    ||||||||||||||||||||||||  ||||    ||||||||||||||||  ||  ||| ||||  ||||||| ||||   | |||||| | ||||||||    
T  5413338 cacaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaagattgttcacc-agttcggtccaaacttgacctac-tctggaggag 5413435  T
Q  199 agac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataa 296  Q
    |||   ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||    
T  5413436 agattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccctaa 5413534  T
Q  297 tttctacc 304  Q
    ||||||||    
T  5413535 tttctacc 5413542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 31404618 - 31404823
Alignment:
Q  103 cacaaaccacaagcaaaagataaagtgaga----agagaaacaaacacactgaaatttgatcacatagttcggcccaataataacctacgtttggaggag 198  Q
    ||||||||||||||||||||||||  ||||    ||||||||||||||||  ||  ||| ||||  ||||||| ||||   |  ||||| | ||||||||    
T  31404618 cacaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaagattgttcacccagttcggtccaaacttggcctac-tctggaggag 31404716  T
Q  199 agac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataa 296  Q
    |||   ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||    
T  31404717 agattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaa 31404815  T
Q  297 tttctacc 304  Q
    ||||||||    
T  31404816 tttctacc 31404823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 186812 - 186734
Alignment:
Q  226 aattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||| ||||||||||||||| | ||   ||| |||  |||||||||||||| |||||||||| | |||||||||    
T  186812 aattctttacaaagagatacaaaagagctataaaaatttaacttcaacaagctctccaagaacaaaccttatttctacc 186734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 4045635 - 4045593
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    ||||||| || ||||||||||| ||||||||||||||||||||    
T  4045635 aaaccacgagtaaaagataaagagagaagagaaacaaacacac 4045593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 14521628 - 14521670
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||    
T  14521628 aaaccacaagcataagataaagtgagaaaagaaataaacacac 14521670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 26830155 - 26830271
Alignment:
Q  189 tttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaaga 286  Q
    |||||||||||||   ||||||||| | |||||||||  | ||||| | ||||||||||||| || ||||   ||||||| |||||||||||| ||||||    
T  26830155 tttggaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaaga 26830253  T
Q  287 acaaacataatttctacc 304  Q
    ||||   |||||||||||    
T  26830254 acaactctaatttctacc 26830271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 5406248 - 5406348
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||    
T  5406248 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta 5406346  T
Q  303 cc 304  Q
    ||    
T  5406347 cc 5406348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 5410573 - 5410673
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||    
T  5410573 atctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta 5410671  T
Q  303 cc 304  Q
    ||    
T  5410672 cc 5410673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 9183079 - 9183179
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||||||||||| |||||||   ||||||| ||||||||  || |||||||||| | |||||||||    
T  9183079 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttcta 9183177  T
Q  303 cc 304  Q
    ||    
T  9183178 cc 9183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 16569241 - 16569197
Alignment:
Q  106 aaaccacaagcaaaagataaagtgaga--agagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||    
T  16569241 aaaccacaagcaaaagataaagagagaagagagaaacaaacacac 16569197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 22616063 - 22615994
Alignment:
Q  232 ttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||||||||||| || ||||   |||| ||||||||||||||||| || ||||| | ||||||||    
T  22616063 ttataaagagatacaaagggattacaagaaatcagtttcaacaagctctctaaaaacaatcttaatttct 22615994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 28137456 - 28137556
Alignment:
Q  203 atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttcta 302  Q
    ||||||||| | |||||||||  | ||||| | ||||| ||||||| |||||||   ||||||| || ||||||||| |||||||||| | |||||||||    
T  28137456 atctctccaatccactatcaatgagttctt-acaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttcta 28137554  T
Q  303 cc 304  Q
    ||    
T  28137555 cc 28137556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 3038983 - 3039051
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| ||||| |||||| ||| |||||| | |||||||||||    
T  3038983 aaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaacaaccctaatttctacc 3039051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 17763054 - 17763010
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  17763054 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 17763010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 30834616 - 30834684
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  30834616 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 30834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 303
Target Start/End: Original strand, 27366 - 27591
Alignment:
Q  81 aatctagtaaccaagtataaaacacaaa-ccacaagcaaaagataaagtgagaagagaaacaaacacactgaaatttgatcacatagttcggcccaataa 179  Q
    ||||||| || |||||  |||||||||| ||||||||||||| ||||| ||||||||||| |||||||   | |  || | || || ||||| |||| ||    
T  27366 aatctaggaatcaagtgaaaaacacaaaaccacaagcaaaaggtaaagagagaagagaaataaacacatcaataaatgtttacctaattcggtccaacaa 27465  T
Q  180 taacctacgtttggaggagagac--atctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagc 277  Q
    | |||||| | ||| |||||||   ||||||||| | |||||||||  | || |||| ||||||||||||| | |||||   ||||||| ||||||||||    
T  27466 tgacctac-tatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaagc 27564  T
Q  278 tctcaaagaacaa-acataatttctac 303  Q
    |||  |||||||| |||||||||||||    
T  27565 tcttcaagaacaatacataatttctac 27591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 1449 - 1491
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  1449 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 1491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 7415 - 7347
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||||||||| |||||||   ||||||| |||||||||||| |||||||||| | |||||||||||    
T  7415 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacc 7347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 149048 - 149090
Alignment:
Q  106 aaaccacaagcaaaagataaagtgagaagagaaacaaacacac 148  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  149048 aaaccacaagcaaaagataaagagagaagagaaacaaatacac 149090  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 11211 - 11310
Alignment:
Q  205 ctctccacttcactatcaaccaattctttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| | |||||||||| | |||||   |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  11211 ctctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaaccctaatttctacc 11310  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 18078 - 18151
Alignment:
Q  231 tttataaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||| ||||||||||||| | |||||   ||||||| |||||||||||| ||| |||||| | |||||||||||    
T  18078 tttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacc 18151  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 20495 - 20560
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttct 301  Q
    ||||||||||||| |||||||   ||||||| ||||||||| || |||| ||||||| ||||||||    
T  20495 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaacctaatttct 20560  T

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Target: scaffold1519 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 1004 - 936
Alignment:
Q  236 aaagagatacaaaagggttacttaaaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    |||||||||||||||||||||   ||||||| ||  ||||| || |||||||||| | |||||||||||    
T  1004 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 936  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 80387 - 80431
Alignment:
Q  260 aaattagtttcaacaagctctcaaagaacaaacataatttctacc 304  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||    
T  80387 aaattagcttcaacaagctcacaaagaacaaccctaatttctacc 80431  T

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